CaUC01G004370 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G004370
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	3-isopropylmalate dehydratase small subunit 3-like
Location	Ciama_Chr01: 4761867 .. 4764603 (+)
RNA-Seq Expression	CaUC01G004370
Synteny	CaUC01G004370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACCAATATTATGGTCATTAGTCAAAGTATTTAGTTTAGGCCTTCGCATTTTACCCAAGCTGATTACGATTTACGACATACAACACCAAAAGGCGTCCCCGTTCGATCTCACATTTTCTCGGCCAGAAACAACCATGGCGGCTTCACTGTTTCTGTCTCAGAGCCCTATCGCCACTTCCACTCCCCGATCGTCACCGTCCATTTCCCTTCTGCCTTCTCCTCAAACCATCAAATTCCCCTCTCCCCACTCCAATTTCCGCAATGATCTATCCATCGCCATCTCCCACGCGCCGCCACGTGCTGCAACTATCATCCCTCGAGCAACCGCTTCACCGTCCTCCGCCGCTCCTTCAACCACCGCATTTCACGGCCGCTGCTATGTCGTCGGAGACAACATCGATACCGACCAGATTATTCCGGCTGAGTACCTAACTTTGGTCCCCTCAAATCCCAGCGAATATGAGAAGCTCGGATCCTACGCCCTAATTGGCCTTCCTTCCTCTTATTCCACCCGCTTCGTCGAACCTGACGAGACGAAAACCAAATATTCCATCATAATTGCCGGCGACAACTTCGGCTGCGGTTCTTCAAGAGAGCACGCTCCGGTTGCGTTGGGAGCGTCCGGCGCCGTGGCTGTGGTTGCTGAATCTTATGCGCGTATATTCTTCAGAAATTCGGTGGCAACCGGAGAGATTTATCCATTAGAATCGGAGATTAGGATTTGCGATGAATGTAAGACCGGCGACGTGGTGACAATCGAGCTCGGAGAAAGCCGTTTGATCAACCATACGACGGGGAAAGAATACAAGCTCAAGCCTATTGGGGATGCAGGTCCTGTTATCGAGGCTGGTGGGATTTTTGCATATGCAAGGCAGACGGGTATGATTCCAAGCCAAACGAAGTGAAGTTGAATTTTAGTTTTTTGGGTTCGTTAGAATTCATTGTCGTTTTGTTTGTTAAGTTATTTCTTTGCTTGCTACTGAGCTTAGAATTCCGTAGAAGTGTCTGTCTTGGTAATGTGTATTAATGAGTTAATAATTCAGACTGAATTAAGGAAGCAAAAATGATTGCTTTTGGAGTTGAAGTCTGAGATGAATCTTGCATTTTAGCCGTAGCTTCTTTAGGAGCAGGCGTTATGTCATAATTTTATTACAAGTTATGGAAAATTTGATCTTTGGATGTCATATTGTTCAGTATTTGGAACCTCCTGCTACTCTGTGAAAATCATGGGGTTTTTATTCTTGTCATGTCAATGGATATCTCTTCATTTTTCACCAATAGTATGACATCGTCTGAAAGGTTTAAACCCACGTAGTTTTGCATTTAAGATTTCATCTGAAAGGTCTCTTACCAAGGAAGATGTTGTACTTGTATATTTGGGACCCTCTCCACTTTTAAACAATGTGGACTTTGTTCACATTCCTAATAATTGGGAGTATGTACACTTTTTGCTGGTTGTAGATGATTTGATGTTGACTCTTAGAGTTTTGAATTTTTTTGTGATTTCAATATGAATGAAGTATTGTAATGTAATTAATTTTTGGCACTAATCAGTCCTAGGGCCCCAATAGTCTGAATTATTGAGTGGCAGCCTCAACTGTAGCTAATAAACTTGAGACTGAGACCAAGTCTGTGGTTGTCTTGTTTATATTTCAATAAGCAATTATGCACTTGTTCATATTCCTATAGCATGGAAAATATAATTGTTAGATTTTTAAATCATTTATCAACTTTGTTCCTGGCAAGGCAATGTACTCTGCATCAAGAAATCTTGTATTGATGGGTTCCATTATGTTGAATCATTTTGCTTTTTGGCAACTGGAGTCTCTAAGAATTAGCTTTCTAGTTCTGAACTTGCTCTTTCTAACAAATTGCTAACCATTCCTCTAGCTCCATCAGAGATAAACTAGTGCCCTGATCAAATTGTGGCTCATACGATACCATTTACATTGGCAGAGGTCTTTTGTTGCAAGTGGGGCTCGATAGCGACTGGCACTCCTTGTTGGAGGAGGTGCTTCTGCATCCTTCCTTTTGGATGAAGGGCTATGTGTTGTGGCATGTGAGTTTCTTCATAGGGTGCTTGGCTTGAGAGGAATAGTAGGATCTTTAGGGATTTTGAGTAATCTAGGGAGAAAGTTTGGGAGTTCCCGAGTTGGTTAGGTTTAATGCTTCTTTTTAGGTGTCGATCACTAGACTGTTTTATAATTATGACATTAGTCTTGTTCTTTTGGATTGGAGTCTTTTTCGTATTTAGTGCCAGACTCCTGTTTTTTTTCTTTTCTTTTTAGGAGCTTGGTTTTTTGTTTGCCCGAAATATATATATAACACAATAACAACAATAAGTTTATTATTTCATAACTTGGAGCATCCTACTTATGGGTCCTTAGAGCTATGGAATGCTAATTTTCTGTGTACCACTAAGGGAATTTTTAGCCACCAATGGACTTCTCTCATCTGTGGTTTCTTATTGGTTAGAATATATTTGCCTTTGAGTCTGCTTTTGTGAAGGTCTGTATTATGTTGGGAGTCAATGACATCCTCTTCCTCACCTGGAATTAGTCTCCAATTGCAGATCAAGAATTTTCTTGACACTCTTGAAGGAATCTCATATTTTCTATCCCCCAGACTCTTATTTTGAGATAATGTGGTCCAATTGATAAGTTTCTTGAGTTATATGTTACATCCATTCTTTAATGATATCCAGGAAGATTGGGGATTAGAGAACTTTCATGA

mRNA sequence

ATGAAACCAATATTATGGTCATTAGTCAAAGTATTTAGTTTAGGCCTTCGCATTTTACCCAAGCTGATTACGATTTACGACATACAACACCAAAAGGCGTCCCCGTTCGATCTCACATTTTCTCGGCCAGAAACAACCATGGCGGCTTCACTGTTTCTGTCTCAGAGCCCTATCGCCACTTCCACTCCCCGATCGTCACCGTCCATTTCCCTTCTGCCTTCTCCTCAAACCATCAAATTCCCCTCTCCCCACTCCAATTTCCGCAATGATCTATCCATCGCCATCTCCCACGCGCCGCCACGTGCTGCAACTATCATCCCTCGAGCAACCGCTTCACCGTCCTCCGCCGCTCCTTCAACCACCGCATTTCACGGCCGCTGCTATGTCGTCGGAGACAACATCGATACCGACCAGATTATTCCGGCTGAGTACCTAACTTTGGTCCCCTCAAATCCCAGCGAATATGAGAAGCTCGGATCCTACGCCCTAATTGGCCTTCCTTCCTCTTATTCCACCCGCTTCGTCGAACCTGACGAGACGAAAACCAAATATTCCATCATAATTGCCGGCGACAACTTCGGCTGCGGTTCTTCAAGAGAGCACGCTCCGGTTGCGTTGGGAGCGTCCGGCGCCGTGGCTGTGGTTGCTGAATCTTATGCGCGTATATTCTTCAGAAATTCGGTGGCAACCGGAGAGATTTATCCATTAGAATCGGAGATTAGGATTTGCGATGAATGTAAGACCGGCGACGTGGTGACAATCGAGCTCGGAGAAAGCCGTTTGATCAACCATACGACGGGGAAAGAATACAAGCTCAAGCCTATTGGGGATGCAGGTCCTGTTATCGAGGCTGGTGGGATTTTTGCATATGCAAGGCAGACGGGAAGATTGGGGATTAGAGAACTTTCATGA

Coding sequence (CDS)

ATGAAACCAATATTATGGTCATTAGTCAAAGTATTTAGTTTAGGCCTTCGCATTTTACCCAAGCTGATTACGATTTACGACATACAACACCAAAAGGCGTCCCCGTTCGATCTCACATTTTCTCGGCCAGAAACAACCATGGCGGCTTCACTGTTTCTGTCTCAGAGCCCTATCGCCACTTCCACTCCCCGATCGTCACCGTCCATTTCCCTTCTGCCTTCTCCTCAAACCATCAAATTCCCCTCTCCCCACTCCAATTTCCGCAATGATCTATCCATCGCCATCTCCCACGCGCCGCCACGTGCTGCAACTATCATCCCTCGAGCAACCGCTTCACCGTCCTCCGCCGCTCCTTCAACCACCGCATTTCACGGCCGCTGCTATGTCGTCGGAGACAACATCGATACCGACCAGATTATTCCGGCTGAGTACCTAACTTTGGTCCCCTCAAATCCCAGCGAATATGAGAAGCTCGGATCCTACGCCCTAATTGGCCTTCCTTCCTCTTATTCCACCCGCTTCGTCGAACCTGACGAGACGAAAACCAAATATTCCATCATAATTGCCGGCGACAACTTCGGCTGCGGTTCTTCAAGAGAGCACGCTCCGGTTGCGTTGGGAGCGTCCGGCGCCGTGGCTGTGGTTGCTGAATCTTATGCGCGTATATTCTTCAGAAATTCGGTGGCAACCGGAGAGATTTATCCATTAGAATCGGAGATTAGGATTTGCGATGAATGTAAGACCGGCGACGTGGTGACAATCGAGCTCGGAGAAAGCCGTTTGATCAACCATACGACGGGGAAAGAATACAAGCTCAAGCCTATTGGGGATGCAGGTCCTGTTATCGAGGCTGGTGGGATTTTTGCATATGCAAGGCAGACGGGAAGATTGGGGATTAGAGAACTTTCATGA

Protein sequence

MKPILWSLVKVFSLGLRILPKLITIYDIQHQKASPFDLTFSRPETTMAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATIIPRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARQTGRLGIRELS

Homology

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BLAST of CaUC01G004370 vs. NCBI nr
Match: XP_038876127.1 (3-isopropylmalate dehydratase small subunit 1-like [Benincasa hispida])

HSP 1 Score: 500.4 bits (1287), Expect = 1.1e-137
Identity = 255/274 (93.07%), Postives = 262/274 (95.62%), Query Frame = 0


Query: 24  TIYDIQHQKASPFDLTFSRPETTMAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSP 83
           T YDI+HQK +PFDLTFSRPETTMAASLFLSQSPIAT TPRSSPSIS L SPQTIKFPSP
Sbjct: 11  TNYDIKHQKETPFDLTFSRPETTMAASLFLSQSPIATPTPRSSPSISFLSSPQTIKFPSP 70

Query: 84  HSNFRNDLSIAISHAPPRAATIIPRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAE 143
           HS+F  DLSIA+SHAPPRAATIIPRATASPSS APSTTAFHGRCYVVGDNIDTDQIIPAE
Sbjct: 71  HSSFLFDLSIAVSHAPPRAATIIPRATASPSSTAPSTTAFHGRCYVVGDNIDTDQIIPAE 130

Query: 144 YLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAP 203
           YLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVE DE KTKYSIIIAGDNFGCGSSREHAP
Sbjct: 131 YLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVESDEMKTKYSIIIAGDNFGCGSSREHAP 190

Query: 204 VALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICDECKTGDVVTIELGESRLIN 263
           VALGASGAVAVVAESYARIFFRNSVATGEIYPLESE RICDECKTGDVVTIELG+SRLIN
Sbjct: 191 VALGASGAVAVVAESYARIFFRNSVATGEIYPLESETRICDECKTGDVVTIELGKSRLIN 250

Query: 264 HTTGKEYKLKPIGDAGPVIEAGGIFAYARQTGRL 298
           HTTGKEYKLKPIGDAGPVIEAGGIFAYAR+TG +
Sbjct: 251 HTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGMI 284

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BLAST of CaUC01G004370 vs. NCBI nr
Match: XP_008437054.1 (PREDICTED: 3-isopropylmalate dehydratase small subunit 3-like [Cucumis melo] >KAA0039730.1 3-isopropylmalate dehydratase small subunit 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 444.9 bits (1143), Expect = 5.6e-121
Identity = 229/251 (91.24%), Postives = 236/251 (94.02%), Query Frame = 0


Query: 47  MAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATII 106
           MAASLFLS+SPIA STPRSSPS+SLL SPQT+KFPS +SN   DLSIA+SHA PR ATII
Sbjct: 1   MAASLFLSRSPIAISTPRSSPSVSLLSSPQTLKFPSSYSNSLFDLSIAVSHATPRLATII 60

Query: 107 PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 166
           PRATASPSS APS TAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL
Sbjct: 61  PRATASPSSTAPSATAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120

Query: 167 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 226
           PSSYSTRFVE DE KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRFVESDEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 227 SVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGG 286
           SVATGEIYPLESE RICDECKTGDVVTIEL ESRLINHTTGKEYKLKPIGDAGPVIEAGG
Sbjct: 181 SVATGEIYPLESETRICDECKTGDVVTIELAESRLINHTTGKEYKLKPIGDAGPVIEAGG 240

Query: 287 IFAYARQTGRL 298
           IFAYAR+TG +
Sbjct: 241 IFAYARKTGMI 251

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BLAST of CaUC01G004370 vs. NCBI nr
Match: XP_004152394.1 (3-isopropylmalate dehydratase small subunit 3 [Cucumis sativus] >KGN50272.1 hypothetical protein Csa_000662 [Cucumis sativus])

HSP 1 Score: 428.7 bits (1101), Expect = 4.1e-116
Identity = 224/251 (89.24%), Postives = 232/251 (92.43%), Query Frame = 0


Query: 47  MAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATII 106
           MAASLFLSQSPIA STPRSSPSISLL SPQT+KF S HSNF  +LSIA+SHAP R ATII
Sbjct: 1   MAASLFLSQSPIAISTPRSSPSISLLSSPQTLKFRSSHSNFLFNLSIAVSHAPSRLATII 60

Query: 107 PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 166
           PRATASPSS     TAFHG CYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL
Sbjct: 61  PRATASPSS-----TAFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120

Query: 167 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 226
           PSSYSTR+VE +E KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRYVESEEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 227 SVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGG 286
           SVATGEIYPLESE RIC+ECKTGDVVTIEL ESRLINHTTGKEYKLKPIGDAGPVIEAGG
Sbjct: 181 SVATGEIYPLESETRICEECKTGDVVTIELAESRLINHTTGKEYKLKPIGDAGPVIEAGG 240

Query: 287 IFAYARQTGRL 298
           IFAYAR+TG +
Sbjct: 241 IFAYARKTGMI 246

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BLAST of CaUC01G004370 vs. NCBI nr
Match: XP_023521482.1 (3-isopropylmalate dehydratase small subunit 3-like [Cucurbita pepo subsp. pepo] >XP_023533844.1 3-isopropylmalate dehydratase small subunit 3-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023533845.1 3-isopropylmalate dehydratase small subunit 3-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 427.2 bits (1097), Expect = 1.2e-115
Identity = 221/252 (87.70%), Postives = 232/252 (92.06%), Query Frame = 0


Query: 46  TMAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATI 105
           TMAASL+LSQSPIAT+T RSSP ISLLP  Q+IKFPS H +   DLSI  SHA  RAATI
Sbjct: 2   TMAASLYLSQSPIATATRRSSPFISLLPPSQSIKFPSLHCHTLKDLSITASHASQRAATI 61

Query: 106 IPRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG 165
           IPRA A+PSSAA STT FHG CYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG
Sbjct: 62  IPRAAATPSSAASSTTVFHGSCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG 121

Query: 166 LPSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR 225
           LPSSYSTRFVEP+E KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR
Sbjct: 122 LPSSYSTRFVEPNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR 181

Query: 226 NSVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAG 285
           NSV+TGEIYPLESEIRICDECKTGDV+TIEL ESRLINHTTGKEYKLKPIGDAGPVIEAG
Sbjct: 182 NSVSTGEIYPLESEIRICDECKTGDVLTIELAESRLINHTTGKEYKLKPIGDAGPVIEAG 241

Query: 286 GIFAYARQTGRL 298
           GIFAYAR++G +
Sbjct: 242 GIFAYARKSGMI 253

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BLAST of CaUC01G004370 vs. NCBI nr
Match: XP_022996177.1 (3-isopropylmalate dehydratase small subunit 3-like [Cucurbita maxima])

HSP 1 Score: 426.4 bits (1095), Expect = 2.1e-115
Identity = 220/252 (87.30%), Postives = 232/252 (92.06%), Query Frame = 0


Query: 46  TMAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATI 105
           TMAASL+LSQSPIAT+T RSSP ISL+P  Q+IKFPS H +   DLSI  SHA  RAATI
Sbjct: 2   TMAASLYLSQSPIATATRRSSPFISLIPPSQSIKFPSLHCHTLKDLSITASHASQRAATI 61

Query: 106 IPRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG 165
           IPRA A+PSSAA STT FHG CYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG
Sbjct: 62  IPRAAATPSSAASSTTVFHGSCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG 121

Query: 166 LPSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR 225
           LPSSYSTRFVEP+E KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR
Sbjct: 122 LPSSYSTRFVEPNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR 181

Query: 226 NSVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAG 285
           NSV+TGEIYPLESEIRICDECKTGDV+TIEL ESRLINHTTGKEYKLKPIGDAGPVIEAG
Sbjct: 182 NSVSTGEIYPLESEIRICDECKTGDVLTIELAESRLINHTTGKEYKLKPIGDAGPVIEAG 241

Query: 286 GIFAYARQTGRL 298
           GIFAYAR++G +
Sbjct: 242 GIFAYARKSGMI 253

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BLAST of CaUC01G004370 vs. ExPASy Swiss-Prot
Match: Q9ZW85 (3-isopropylmalate dehydratase small subunit 1 OS=Arabidopsis thaliana OX=3702 GN=SSU1 PE=1 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 5.3e-82
Identity = 163/253 (64.43%), Postives = 192/253 (75.89%), Query Frame = 0


Query: 58  IATSTPRSSPSIS-LLPSPQTIKFPSPHSNFR------NDLSIAISHAP----PRAATII 117
           +A S   ++P++S  L SP     PS  + FR      N  S+A +  P      +++ +
Sbjct: 1   MAASLQSANPTLSRTLASPNK---PSSFATFRSPFLRFNSTSVASNFKPLVSREASSSFV 60

Query: 118 PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 177
            R+ A P         FHG CYVVGDNIDTDQIIPAE+LTLVPSNP EYEKLGSYAL+GL
Sbjct: 61  TRSAAEPQ----ERKTFHGLCYVVGDNIDTDQIIPAEFLTLVPSNPEEYEKLGSYALVGL 120

Query: 178 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 237
           P+SY  RFV+P E KTKYSIII G+NFGCGSSREHAPV LGA+GA AVVA+SYARIFFRN
Sbjct: 121 PASYKERFVQPGEMKTKYSIIIGGENFGCGSSREHAPVCLGAAGAKAVVAQSYARIFFRN 180

Query: 238 SVATGEIYPLESEIRICDECKTGDVVTIEL--GESRLINHTTGKEYKLKPIGDAGPVIEA 297
           SVATGE+YPL+SE+R+CDEC TGDV T+EL  G+S LINHTTGKEYKLKPIGDAGPVI+A
Sbjct: 181 SVATGEVYPLDSEVRVCDECTTGDVATVELREGDSILINHTTGKEYKLKPIGDAGPVIDA 240

[Close]

BLAST of CaUC01G004370 vs. ExPASy Swiss-Prot
Match: Q9LYT7 (3-isopropylmalate dehydratase small subunit 3 OS=Arabidopsis thaliana OX=3702 GN=SSU3 PE=1 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 6.3e-75
Identity = 158/252 (62.70%), Postives = 183/252 (72.62%), Query Frame = 0


Query: 52  FLSQSPIATSTPRSSPSISLLPSP-QTIKFPSPHSNFRNDLSIAISHAPPRAATIIPRAT 111
           FL+ +   +    +  S +L PSP   +K  S   N++   S         +ATII R  
Sbjct: 7   FLNPTLFKSLASSNKNSCTLCPSPFLQLKSASTIFNYKPLTS--------SSATIITRVA 66

Query: 112 ASPSSAAPSTT--AFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPS 171
           AS S +  S T   FHG C+V+ DNIDTDQIIPAEY TL+PS P + EKLGS+AL GLP 
Sbjct: 67  ASSSDSGESITRETFHGLCFVLKDNIDTDQIIPAEYGTLIPSIPEDREKLGSFALNGLPK 126

Query: 172 SYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSV 231
            Y+ RFV P E K+KYS+II GDNFGCGSSREHAPV LGA+GA AVVAESYARIFFRN V
Sbjct: 127 FYNERFVVPGEMKSKYSVIIGGDNFGCGSSREHAPVCLGAAGAKAVVAESYARIFFRNCV 186

Query: 232 ATGEIYPLESEIRICDECKTGDVVTIEL---GESRLINHTTGKEYKLKPIGDAGPVIEAG 291
           ATGEI+PLESE+RICDECKTGDVVTIE    G S LINHTT KEYKLKP+GDAGPVI+AG
Sbjct: 187 ATGEIFPLESEVRICDECKTGDVVTIEHKEDGSSLLINHTTRKEYKLKPLGDAGPVIDAG 246

Query: 292 GIFAYARQTGRL 298
           GIFAYAR+ G +
Sbjct: 247 GIFAYARKAGMI 250

[Close]

BLAST of CaUC01G004370 vs. ExPASy Swiss-Prot
Match: Q9ZW84 (3-isopropylmalate dehydratase small subunit 2 OS=Arabidopsis thaliana OX=3702 GN=SSU2 PE=1 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 3.8e-72
Identity = 146/244 (59.84%), Postives = 174/244 (71.31%), Query Frame = 0


Query: 63  PRSSPSISLLPSPQTIKFPSPHSNFRNDL-----SIAISHAPPRAATIIPRATASPSSA- 122
           P++ P  S   S     F SP   F         SI+I+     + TIIPRA AS S + 
Sbjct: 9   PQALPCSSTKTSSSLATFRSPFLRFNGSTSLIPSSISITSRGTSSPTIIPRAAASESDSN 68

Query: 123 -APSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFV 182
            A + T FHG CYV+ DNIDTDQIIPA      PSN  E +++ ++AL GLP  + TRF+
Sbjct: 69  EALANTTFHGLCYVLKDNIDTDQIIPAGAACTFPSNQQERDEIAAHALSGLPDFHKTRFI 128

Query: 183 EPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYP 242
           EP E ++KYSIII G+NFGCGSSREHAPV LGA+GA A+VAESYARIFFRNSVATGE++P
Sbjct: 129 EPGENRSKYSIIIGGENFGCGSSREHAPVCLGAAGAKAIVAESYARIFFRNSVATGEVFP 188

Query: 243 LESEIRICDECKTGDVVTIELGES--RLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARQ 298
           LESE+R+C+ECKTGD VTIEL +S   L NHTTGK YKLK IGDAGPVI+AGGIFAYAR 
Sbjct: 189 LESEVRVCEECKTGDTVTIELSDSGGLLTNHTTGKNYKLKSIGDAGPVIDAGGIFAYARM 248

[Close]

BLAST of CaUC01G004370 vs. ExPASy Swiss-Prot
Match: B5YHE5 (3-isopropylmalate dehydratase small subunit OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) OX=289376 GN=leuD PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.0e-28
Identity = 77/179 (43.02%), Postives = 110/179 (61.45%), Query Frame = 0


Query: 125 GRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVEPDETKTKY 184
           G+ +  GDNIDTD IIPA YL     N S+ ++L  + +    SS+ ++ V+P +     
Sbjct: 5   GKVWKFGDNIDTDAIIPARYL-----NTSDPKELAKHVMEDADSSFPSK-VKPGD----- 64

Query: 185 SIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICD 244
            IIIAG NFGCGSSREHAP+A+ ASG  AV+A+SYARIFFRN+   G   P+     + D
Sbjct: 65  -IIIAGRNFGCGSSREHAPIAIKASGIRAVIAKSYARIFFRNAFNIG--LPIFEVPELID 124

Query: 245 ECKTGDVVTIELGESRLINHTTGKEYKLKPIGD-AGPVIEAGGIFAYARQTGRLGIREL 303
           E   GD V I++   ++IN T GK+Y  KPI      +I+AGG+  + ++  RL + ++
Sbjct: 125 ETNEGDEVEIDMNSGQIINLTKGKKYNTKPIPPFMQELIKAGGLVEWTKK--RLSMEDI 167

[Close]

BLAST of CaUC01G004370 vs. ExPASy Swiss-Prot
Match: Q9WZ25 (3-isopropylmalate dehydratase small subunit 2 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=leuD2 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.7e-27
Identity = 70/167 (41.92%), Postives = 103/167 (61.68%), Query Frame = 0


Query: 125 GRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFVEPDETKTKY 184
           G+ +V GDN++TD+IIPA YL     N S+ ++L  Y +      +  R         K 
Sbjct: 7   GKVFVFGDNVNTDEIIPARYL-----NTSDPQELAKYCMEDARPGFGRR------DDIKG 66

Query: 185 SIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYPLESEIRICD 244
           SII+AG+NFGCGSSREHAPVA+ A+G   V+A+S+ARIFFRN++  G   P+  E++  D
Sbjct: 67  SIIVAGENFGCGSSREHAPVAIKAAGISCVIAKSFARIFFRNAINIG--LPI-VELKEAD 126

Query: 245 ECKTGDVVTIELGESRLINHTTGKEYKLKPIGD-AGPVIEAGGIFAY 291
           E + GD+  ++L    + N T GKEY+++P  +    ++EAGG   Y
Sbjct: 127 EFEEGDIAEVDLENGVVRNLTKGKEYRIRPYPEFLMKIMEAGGWLEY 159

[Close]

BLAST of CaUC01G004370 vs. ExPASy TrEMBL
Match: A0A5A7T900 (3-isopropylmalate dehydratase small subunit 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00620 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 2.7e-121
Identity = 229/251 (91.24%), Postives = 236/251 (94.02%), Query Frame = 0


Query: 47  MAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATII 106
           MAASLFLS+SPIA STPRSSPS+SLL SPQT+KFPS +SN   DLSIA+SHA PR ATII
Sbjct: 1   MAASLFLSRSPIAISTPRSSPSVSLLSSPQTLKFPSSYSNSLFDLSIAVSHATPRLATII 60

Query: 107 PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 166
           PRATASPSS APS TAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL
Sbjct: 61  PRATASPSSTAPSATAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120

Query: 167 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 226
           PSSYSTRFVE DE KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRFVESDEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 227 SVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGG 286
           SVATGEIYPLESE RICDECKTGDVVTIEL ESRLINHTTGKEYKLKPIGDAGPVIEAGG
Sbjct: 181 SVATGEIYPLESETRICDECKTGDVVTIELAESRLINHTTGKEYKLKPIGDAGPVIEAGG 240

Query: 287 IFAYARQTGRL 298
           IFAYAR+TG +
Sbjct: 241 IFAYARKTGMI 251

[Close]

BLAST of CaUC01G004370 vs. ExPASy TrEMBL
Match: A0A1S3AT32 (3-isopropylmalate dehydratase small subunit 3-like OS=Cucumis melo OX=3656 GN=LOC103482595 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 2.7e-121
Identity = 229/251 (91.24%), Postives = 236/251 (94.02%), Query Frame = 0


Query: 47  MAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATII 106
           MAASLFLS+SPIA STPRSSPS+SLL SPQT+KFPS +SN   DLSIA+SHA PR ATII
Sbjct: 1   MAASLFLSRSPIAISTPRSSPSVSLLSSPQTLKFPSSYSNSLFDLSIAVSHATPRLATII 60

Query: 107 PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 166
           PRATASPSS APS TAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL
Sbjct: 61  PRATASPSSTAPSATAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120

Query: 167 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 226
           PSSYSTRFVE DE KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRFVESDEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 227 SVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGG 286
           SVATGEIYPLESE RICDECKTGDVVTIEL ESRLINHTTGKEYKLKPIGDAGPVIEAGG
Sbjct: 181 SVATGEIYPLESETRICDECKTGDVVTIELAESRLINHTTGKEYKLKPIGDAGPVIEAGG 240

Query: 287 IFAYARQTGRL 298
           IFAYAR+TG +
Sbjct: 241 IFAYARKTGMI 251

[Close]

BLAST of CaUC01G004370 vs. ExPASy TrEMBL
Match: A0A0A0KPB2 (Aconitase_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G165170 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 2.0e-116
Identity = 224/251 (89.24%), Postives = 232/251 (92.43%), Query Frame = 0


Query: 47  MAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATII 106
           MAASLFLSQSPIA STPRSSPSISLL SPQT+KF S HSNF  +LSIA+SHAP R ATII
Sbjct: 1   MAASLFLSQSPIAISTPRSSPSISLLSSPQTLKFRSSHSNFLFNLSIAVSHAPSRLATII 60

Query: 107 PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 166
           PRATASPSS     TAFHG CYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL
Sbjct: 61  PRATASPSS-----TAFHGLCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 120

Query: 167 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 226
           PSSYSTR+VE +E KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN
Sbjct: 121 PSSYSTRYVESEEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 180

Query: 227 SVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAGG 286
           SVATGEIYPLESE RIC+ECKTGDVVTIEL ESRLINHTTGKEYKLKPIGDAGPVIEAGG
Sbjct: 181 SVATGEIYPLESETRICEECKTGDVVTIELAESRLINHTTGKEYKLKPIGDAGPVIEAGG 240

Query: 287 IFAYARQTGRL 298
           IFAYAR+TG +
Sbjct: 241 IFAYARKTGMI 246

[Close]

BLAST of CaUC01G004370 vs. ExPASy TrEMBL
Match: A0A6J1K176 (3-isopropylmalate dehydratase small subunit 3-like OS=Cucurbita maxima OX=3661 GN=LOC111491484 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 1.0e-115
Identity = 220/252 (87.30%), Postives = 232/252 (92.06%), Query Frame = 0


Query: 46  TMAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATI 105
           TMAASL+LSQSPIAT+T RSSP ISL+P  Q+IKFPS H +   DLSI  SHA  RAATI
Sbjct: 2   TMAASLYLSQSPIATATRRSSPFISLIPPSQSIKFPSLHCHTLKDLSITASHASQRAATI 61

Query: 106 IPRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG 165
           IPRA A+PSSAA STT FHG CYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG
Sbjct: 62  IPRAAATPSSAASSTTVFHGSCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG 121

Query: 166 LPSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR 225
           LPSSYSTRFVEP+E KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR
Sbjct: 122 LPSSYSTRFVEPNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR 181

Query: 226 NSVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAG 285
           NSV+TGEIYPLESEIRICDECKTGDV+TIEL ESRLINHTTGKEYKLKPIGDAGPVIEAG
Sbjct: 182 NSVSTGEIYPLESEIRICDECKTGDVLTIELAESRLINHTTGKEYKLKPIGDAGPVIEAG 241

Query: 286 GIFAYARQTGRL 298
           GIFAYAR++G +
Sbjct: 242 GIFAYARKSGMI 253

[Close]

BLAST of CaUC01G004370 vs. ExPASy TrEMBL
Match: A0A6J1H3H6 (3-isopropylmalate dehydratase small subunit 3-like OS=Cucurbita moschata OX=3662 GN=LOC111459316 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.3e-115
Identity = 222/252 (88.10%), Postives = 233/252 (92.46%), Query Frame = 0


Query: 46  TMAASLFLSQSPIATSTPRSSPSISLLPSPQTIKFPSPHSNFRNDLSIAISHAPPRAATI 105
           TMAASL+LSQSPIAT+T RSSP ISLLP PQ+IKFPS H +   DLSI  SHA  RAATI
Sbjct: 2   TMAASLYLSQSPIATATRRSSPFISLLP-PQSIKFPSFHCHTLKDLSITASHASQRAATI 61

Query: 106 IPRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG 165
           IPRA A+PSSAA STT FHG CYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG
Sbjct: 62  IPRAAATPSSAASSTTVFHGSCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIG 121

Query: 166 LPSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR 225
           LPSSYSTRFVEP+E KTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR
Sbjct: 122 LPSSYSTRFVEPNEMKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFR 181

Query: 226 NSVATGEIYPLESEIRICDECKTGDVVTIELGESRLINHTTGKEYKLKPIGDAGPVIEAG 285
           NSV+TGEIYPLESEIRICDECKTGDV+TIEL ESRLINHTTGKEYKLKPIGDAGPVIEAG
Sbjct: 182 NSVSTGEIYPLESEIRICDECKTGDVLTIELAESRLINHTTGKEYKLKPIGDAGPVIEAG 241

Query: 286 GIFAYARQTGRL 298
           GIFAYAR++G +
Sbjct: 242 GIFAYARKSGMI 252

[Close]

BLAST of CaUC01G004370 vs. TAIR 10
Match: AT2G43090.1 (Aconitase/3-isopropylmalate dehydratase protein )

HSP 1 Score: 305.8 bits (782), Expect = 3.8e-83
Identity = 163/253 (64.43%), Postives = 192/253 (75.89%), Query Frame = 0


Query: 58  IATSTPRSSPSIS-LLPSPQTIKFPSPHSNFR------NDLSIAISHAP----PRAATII 117
           +A S   ++P++S  L SP     PS  + FR      N  S+A +  P      +++ +
Sbjct: 1   MAASLQSANPTLSRTLASPNK---PSSFATFRSPFLRFNSTSVASNFKPLVSREASSSFV 60

Query: 118 PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 177
            R+ A P         FHG CYVVGDNIDTDQIIPAE+LTLVPSNP EYEKLGSYAL+GL
Sbjct: 61  TRSAAEPQ----ERKTFHGLCYVVGDNIDTDQIIPAEFLTLVPSNPEEYEKLGSYALVGL 120

Query: 178 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 237
           P+SY  RFV+P E KTKYSIII G+NFGCGSSREHAPV LGA+GA AVVA+SYARIFFRN
Sbjct: 121 PASYKERFVQPGEMKTKYSIIIGGENFGCGSSREHAPVCLGAAGAKAVVAQSYARIFFRN 180

Query: 238 SVATGEIYPLESEIRICDECKTGDVVTIEL--GESRLINHTTGKEYKLKPIGDAGPVIEA 297
           SVATGE+YPL+SE+R+CDEC TGDV T+EL  G+S LINHTTGKEYKLKPIGDAGPVI+A
Sbjct: 181 SVATGEVYPLDSEVRVCDECTTGDVATVELREGDSILINHTTGKEYKLKPIGDAGPVIDA 240

[Close]

BLAST of CaUC01G004370 vs. TAIR 10
Match: AT3G58990.1 (isopropylmalate isomerase 1 )

HSP 1 Score: 282.3 bits (721), Expect = 4.5e-76
Identity = 158/252 (62.70%), Postives = 183/252 (72.62%), Query Frame = 0


Query: 52  FLSQSPIATSTPRSSPSISLLPSP-QTIKFPSPHSNFRNDLSIAISHAPPRAATIIPRAT 111
           FL+ +   +    +  S +L PSP   +K  S   N++   S         +ATII R  
Sbjct: 7   FLNPTLFKSLASSNKNSCTLCPSPFLQLKSASTIFNYKPLTS--------SSATIITRVA 66

Query: 112 ASPSSAAPSTT--AFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPS 171
           AS S +  S T   FHG C+V+ DNIDTDQIIPAEY TL+PS P + EKLGS+AL GLP 
Sbjct: 67  ASSSDSGESITRETFHGLCFVLKDNIDTDQIIPAEYGTLIPSIPEDREKLGSFALNGLPK 126

Query: 172 SYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSV 231
            Y+ RFV P E K+KYS+II GDNFGCGSSREHAPV LGA+GA AVVAESYARIFFRN V
Sbjct: 127 FYNERFVVPGEMKSKYSVIIGGDNFGCGSSREHAPVCLGAAGAKAVVAESYARIFFRNCV 186

Query: 232 ATGEIYPLESEIRICDECKTGDVVTIEL---GESRLINHTTGKEYKLKPIGDAGPVIEAG 291
           ATGEI+PLESE+RICDECKTGDVVTIE    G S LINHTT KEYKLKP+GDAGPVI+AG
Sbjct: 187 ATGEIFPLESEVRICDECKTGDVVTIEHKEDGSSLLINHTTRKEYKLKPLGDAGPVIDAG 246

Query: 292 GIFAYARQTGRL 298
           GIFAYAR+ G +
Sbjct: 247 GIFAYARKAGMI 250

[Close]

BLAST of CaUC01G004370 vs. TAIR 10
Match: AT2G43100.1 (isopropylmalate isomerase 2 )

HSP 1 Score: 273.1 bits (697), Expect = 2.7e-73
Identity = 146/244 (59.84%), Postives = 174/244 (71.31%), Query Frame = 0


Query: 63  PRSSPSISLLPSPQTIKFPSPHSNFRNDL-----SIAISHAPPRAATIIPRATASPSSA- 122
           P++ P  S   S     F SP   F         SI+I+     + TIIPRA AS S + 
Sbjct: 9   PQALPCSSTKTSSSLATFRSPFLRFNGSTSLIPSSISITSRGTSSPTIIPRAAASESDSN 68

Query: 123 -APSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGLPSSYSTRFV 182
            A + T FHG CYV+ DNIDTDQIIPA      PSN  E +++ ++AL GLP  + TRF+
Sbjct: 69  EALANTTFHGLCYVLKDNIDTDQIIPAGAACTFPSNQQERDEIAAHALSGLPDFHKTRFI 128

Query: 183 EPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRNSVATGEIYP 242
           EP E ++KYSIII G+NFGCGSSREHAPV LGA+GA A+VAESYARIFFRNSVATGE++P
Sbjct: 129 EPGENRSKYSIIIGGENFGCGSSREHAPVCLGAAGAKAIVAESYARIFFRNSVATGEVFP 188

Query: 243 LESEIRICDECKTGDVVTIELGES--RLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARQ 298
           LESE+R+C+ECKTGD VTIEL +S   L NHTTGK YKLK IGDAGPVI+AGGIFAYAR 
Sbjct: 189 LESEVRVCEECKTGDTVTIELSDSGGLLTNHTTGKNYKLKSIGDAGPVIDAGGIFAYARM 248

[Close]

BLAST of CaUC01G004370 vs. TAIR 10
Match: AT2G43090.2 (Aconitase/3-isopropylmalate dehydratase protein )

HSP 1 Score: 241.1 bits (614), Expect = 1.1e-63
Identity = 139/253 (54.94%), Postives = 167/253 (66.01%), Query Frame = 0


Query: 58  IATSTPRSSPSIS-LLPSPQTIKFPSPHSNFR------NDLSIAISHAP----PRAATII 117
           +A S   ++P++S  L SP     PS  + FR      N  S+A +  P      +++ +
Sbjct: 1   MAASLQSANPTLSRTLASPNK---PSSFATFRSPFLRFNSTSVASNFKPLVSREASSSFV 60

Query: 118 PRATASPSSAAPSTTAFHGRCYVVGDNIDTDQIIPAEYLTLVPSNPSEYEKLGSYALIGL 177
            R+ A P         FHG CYVVGDNIDTDQIIPAE+LTLVPSNP EYEKLGSYAL+GL
Sbjct: 61  TRSAAEPQ----ERKTFHGLCYVVGDNIDTDQIIPAEFLTLVPSNPEEYEKLGSYALVGL 120

Query: 178 PSSYSTRFVEPDETKTKYSIIIAGDNFGCGSSREHAPVALGASGAVAVVAESYARIFFRN 237
           P+SY  RFV+P                             GA+GA AVVA+SYARIFFRN
Sbjct: 121 PASYKERFVQP-----------------------------GAAGAKAVVAQSYARIFFRN 180

Query: 238 SVATGEIYPLESEIRICDECKTGDVVTIEL--GESRLINHTTGKEYKLKPIGDAGPVIEA 297
           SVATGE+YPL+SE+R+CDEC TGDV T+EL  G+S LINHTTGKEYKLKPIGDAGPVI+A
Sbjct: 181 SVATGEVYPLDSEVRVCDECTTGDVATVELREGDSILINHTTGKEYKLKPIGDAGPVIDA 217

The following BLAST results are available for this feature:

BLAST of CaUC01G004370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876127.1	1.1e-137	93.07	3-isopropylmalate dehydratase small subunit 1-like [Benincasa hispida]	[more]
XP_008437054.1	5.6e-121	91.24	PREDICTED: 3-isopropylmalate dehydratase small subunit 3-like [Cucumis melo] >KA...	[more]
XP_004152394.1	4.1e-116	89.24	3-isopropylmalate dehydratase small subunit 3 [Cucumis sativus] >KGN50272.1 hypo...	[more]
XP_023521482.1	1.2e-115	87.70	3-isopropylmalate dehydratase small subunit 3-like [Cucurbita pepo subsp. pepo] ...	[more]
XP_022996177.1	2.1e-115	87.30	3-isopropylmalate dehydratase small subunit 3-like [Cucurbita maxima]	[more]

BLAST of CaUC01G004370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZW85	5.3e-82	64.43	3-isopropylmalate dehydratase small subunit 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LYT7	6.3e-75	62.70	3-isopropylmalate dehydratase small subunit 3 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9ZW84	3.8e-72	59.84	3-isopropylmalate dehydratase small subunit 2 OS=Arabidopsis thaliana OX=3702 GN...	[more]
B5YHE5	2.0e-28	43.02	3-isopropylmalate dehydratase small subunit OS=Thermodesulfovibrio yellowstonii ...	[more]
Q9WZ25	3.7e-27	41.92	3-isopropylmalate dehydratase small subunit 2 OS=Thermotoga maritima (strain ATC...	[more]

BLAST of CaUC01G004370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T900	2.7e-121	91.24	3-isopropylmalate dehydratase small subunit 3-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3AT32	2.7e-121	91.24	3-isopropylmalate dehydratase small subunit 3-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0KPB2	2.0e-116	89.24	Aconitase_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G165170...	[more]
A0A6J1K176	1.0e-115	87.30	3-isopropylmalate dehydratase small subunit 3-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1H3H6	1.3e-115	88.10	3-isopropylmalate dehydratase small subunit 3-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of CaUC01G004370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43090.1	3.8e-83	64.43	Aconitase/3-isopropylmalate dehydratase protein	[more]
AT3G58990.1	4.5e-76	62.70	isopropylmalate isomerase 1	[more]
AT2G43100.1	2.7e-73	59.84	isopropylmalate isomerase 2	[more]
AT2G43090.2	1.1e-63	54.94	Aconitase/3-isopropylmalate dehydratase protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015928	Aconitase/3-isopropylmalate dehydratase, swivel	GENE3D	3.20.19.10	Aconitase, domain 4	coord: 120..297 e-value: 1.4E-42 score: 147.2
IPR011827	Hydrolyase LeuD/HacB/DmdB	TIGRFAM	TIGR02087	TIGR02087	coord: 125..293 e-value: 1.3E-35 score: 120.5
IPR000573	Aconitase A/isopropylmalate dehydratase small subunit, swivel domain	PFAM	PF00694	Aconitase_C	coord: 184..236 e-value: 5.6E-17 score: 62.3
None	No IPR available	PANTHER	PTHR43345	3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED	coord: 62..296
None	No IPR available	PANTHER	PTHR43345:SF8	BNAA05G34440D PROTEIN	coord: 62..296
None	No IPR available	SUPERFAMILY	52016	LeuD/IlvD-like	coord: 122..295
IPR033940	3-isopropylmalate dehydratase, swivel domain	CDD	cd01577	IPMI_Swivel	coord: 129..256 e-value: 2.74401E-36 score: 123.468

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G004370.1	CaUC01G004370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043436	oxoacid metabolic process
molecular_function	GO:0016836	hydro-lyase activity