CSPI07G15960 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G15960
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr7: 14620855 .. 14622711 (+)
RNA-Seq Expression	CSPI07G15960
Synteny	CSPI07G15960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTCCAAGACCCTCCTCCCTTCCCCTTCTTTCAAACCTAACCTCTCCCCTCTATCTACTCACTCTTCCACTATTCCATCTTCGATTCCCCAAACTTCCTCTACTCATCATCCTAATCCTATATTACCTGCTGCTTTCAATCGCGAAGAGATTTCGTTTCATCACCCTCTTTCATTGTTCCTCCGCAATTGCAAGACAGGTAACATTACTGCAATTCAAGCATTTCATTTCTTTGACCTAATGATGCGTTCACATCCTATCCCCCCCATTTCTTCTTTCAATCGCTTACTTGGTGGCCTTGCTAAGATTAACCATTACTCCCAACTATTTTCTCTCTATAATGAAATGCGCCTTGCTGGACTTTCCCCTGATCTCTTCACGCTAAGTATATTGGCGAATTGCCTTTGTAATGTCAATCGGGTTAGCGAAGCTCTTGCGGCCATGGCGGGGATTTTAAGGAGAGGTTATATTCCTAATGTAGTCACATATACGACCTTGATTAAGGGATTGTGTATGGAGCATAGGATTAGTGAAGCCACCCGGTTATTTCTGAGAATGCAAAAATTAGGTTGTACGCCGAATGCGGTTACTTATGGGACTTTGATAAAGGGGCTATGCCAAACCGGGAATGTTAACATTGCACTTAAGTTGCATAAAGAAATGCTCAATGACGCTAGTCAATATGGGATTAATTGTAAACCTGGTGTTATTACCTATAGTATCATCATAGATGGGCTTTGTAAGGTTGGACGTGAAGACGAGGCAAAAGAACTTTTTGAGGAAATGAAAGCTCAGGGAATGATTCCCGATGTCATTTCATATAGCACCTTGATTCATGGATTTTGTTGTGCTGGAAAGTGGGAGCAGTCTAAACATTTGTTCGATGAGATGGTGGATCAAGGTGTTCAACCAGATATGGTCACATTTAGTGTGTTGATTGATACGCTTTGCAAGGAAGGAAAGGTCACTGAGGCTAAGAAGTTGCTTGAGGTCATGATTCAGAGAGGTATCGTTCCTAATTTGATTACTTATAATTCACTGATTGATGGGTTTTGTATGGTTGGTGATTTGAATAGTGCCAGAGAAGTGTTCCTTAGTATGCCAAGCAAAGGATTAGAACCTGATGAGATTAGCTACACTACACTTATTAACGGGTATTGTAAAACTTGGAAGGTGAAAGAAGCAATGAACCTTTACAATGAAATGCTTCAAGTGGGAAAGAGACCAAATGTGACAACATATGGTACCTTGTTAAAAGGACTTTTTCAGAAAGGCAAGGTTGGTGATGCAAAGAAGCTATTTGGTGTCATGAAAACTTATGGTATTTCGGCAAATTCTCAAATATATGGTATTTTCTTAGATGGGCTGTGTAAGAATGATTGTTTATTTGAAGCAATGGAACTTTTTAATGAGCTCAAATCATACAACTTCAAATTGAACATCGAAAACTACAGTTGTCTAATTGATGGCCTATGTAAAGCAGGAAAACTTGAGACTGCGTGGGAGCTTTTTGAAAAACTATCCCAAGAAGGGCTTCAACCAGATGTTGTCACTTATAACATTATGATCCATGGGTTTTGTAAAGTGGGACAAGTAGATAATGCAAATATTTTGTTTGAAAAGATGGAAGAAAATGGTTGTACTCCTGACATAATTGCTTATAATACCCTTCTTTGTGGTTTCTGCGAAGGTAATAAATTAGAGGAGGTGATTAAACTTCTCCATAAGATGGTTCAAAAGGACGTGTCACCAAATGCTGCCAGTTGCACCATAGTCGTTGACATGCTCTGTAAAGATGAAAAATATAAAAAATTTGTAGACTTGCTTCCAAAATTTCCGGTCCAAAGGCATTGA

mRNA sequence

ATGCCTTCCAAGACCCTCCTCCCTTCCCCTTCTTTCAAACCTAACCTCTCCCCTCTATCTACTCACTCTTCCACTATTCCATCTTCGATTCCCCAAACTTCCTCTACTCATCATCCTAATCCTATATTACCTGCTGCTTTCAATCGCGAAGAGATTTCGTTTCATCACCCTCTTTCATTGTTCCTCCGCAATTGCAAGACAGGTAACATTACTGCAATTCAAGCATTTCATTTCTTTGACCTAATGATGCGTTCACATCCTATCCCCCCCATTTCTTCTTTCAATCGCTTACTTGGTGGCCTTGCTAAGATTAACCATTACTCCCAACTATTTTCTCTCTATAATGAAATGCGCCTTGCTGGACTTTCCCCTGATCTCTTCACGCTAAGTATATTGGCGAATTGCCTTTGTAATGTCAATCGGGTTAGCGAAGCTCTTGCGGCCATGGCGGGGATTTTAAGGAGAGGTTATATTCCTAATGTAGTCACATATACGACCTTGATTAAGGGATTGTGTATGGAGCATAGGATTAGTGAAGCCACCCGGTTATTTCTGAGAATGCAAAAATTAGGTTGTACGCCGAATGCGGTTACTTATGGGACTTTGATAAAGGGGCTATGCCAAACCGGGAATGTTAACATTGCACTTAAGTTGCATAAAGAAATGCTCAATGACGCTAGTCAATATGGGATTAATTGTAAACCTGGTGTTATTACCTATAGTATCATCATAGATGGGCTTTGTAAGGTTGGACGTGAAGACGAGGCAAAAGAACTTTTTGAGGAAATGAAAGCTCAGGGAATGATTCCCGATGTCATTTCATATAGCACCTTGATTCATGGATTTTGTTGTGCTGGAAAGTGGGAGCAGTCTAAACATTTGTTCGATGAGATGGTGGATCAAGGTGTTCAACCAGATATGGTCACATTTAGTGTGTTGATTGATACGCTTTGCAAGGAAGGAAAGGTCACTGAGGCTAAGAAGTTGCTTGAGGTCATGATTCAGAGAGGTATCGTTCCTAATTTGATTACTTATAATTCACTGATTGATGGGTTTTGTATGGTTGGTGATTTGAATAGTGCCAGAGAAGTGTTCCTTAGTATGCCAAGCAAAGGATTAGAACCTGATGAGATTAGCTACACTACACTTATTAACGGGTATTGTAAAACTTGGAAGGTGAAAGAAGCAATGAACCTTTACAATGAAATGCTTCAAGTGGGAAAGAGACCAAATGTGACAACATATGGTACCTTGTTAAAAGGACTTTTTCAGAAAGGCAAGGTTGGTGATGCAAAGAAGCTATTTGGTGTCATGAAAACTTATGGTATTTCGGCAAATTCTCAAATATATGGTATTTTCTTAGATGGGCTGTGTAAGAATGATTGTTTATTTGAAGCAATGGAACTTTTTAATGAGCTCAAATCATACAACTTCAAATTGAACATCGAAAACTACAGTTGTCTAATTGATGGCCTATGTAAAGCAGGAAAACTTGAGACTGCGTGGGAGCTTTTTGAAAAACTATCCCAAGAAGGGCTTCAACCAGATGTTGTCACTTATAACATTATGATCCATGGGTTTTGTAAAGTGGGACAAGTAGATAATGCAAATATTTTGTTTGAAAAGATGGAAGAAAATGGTTGTACTCCTGACATAATTGCTTATAATACCCTTCTTTGTGGTTTCTGCGAAGGTAATAAATTAGAGGAGGTGATTAAACTTCTCCATAAGATGGTTCAAAAGGACGTGTCACCAAATGCTGCCAGTTGCACCATAGTCGTTGACATGCTCTGTAAAGATGAAAAATATAAAAAATTTGTAGACTTGCTTCCAAAATTTCCGGTCCAAAGGCATTGA

Coding sequence (CDS)

ATGCCTTCCAAGACCCTCCTCCCTTCCCCTTCTTTCAAACCTAACCTCTCCCCTCTATCTACTCACTCTTCCACTATTCCATCTTCGATTCCCCAAACTTCCTCTACTCATCATCCTAATCCTATATTACCTGCTGCTTTCAATCGCGAAGAGATTTCGTTTCATCACCCTCTTTCATTGTTCCTCCGCAATTGCAAGACAGGTAACATTACTGCAATTCAAGCATTTCATTTCTTTGACCTAATGATGCGTTCACATCCTATCCCCCCCATTTCTTCTTTCAATCGCTTACTTGGTGGCCTTGCTAAGATTAACCATTACTCCCAACTATTTTCTCTCTATAATGAAATGCGCCTTGCTGGACTTTCCCCTGATCTCTTCACGCTAAGTATATTGGCGAATTGCCTTTGTAATGTCAATCGGGTTAGCGAAGCTCTTGCGGCCATGGCGGGGATTTTAAGGAGAGGTTATATTCCTAATGTAGTCACATATACGACCTTGATTAAGGGATTGTGTATGGAGCATAGGATTAGTGAAGCCACCCGGTTATTTCTGAGAATGCAAAAATTAGGTTGTACGCCGAATGCGGTTACTTATGGGACTTTGATAAAGGGGCTATGCCAAACCGGGAATGTTAACATTGCACTTAAGTTGCATAAAGAAATGCTCAATGACGCTAGTCAATATGGGATTAATTGTAAACCTGGTGTTATTACCTATAGTATCATCATAGATGGGCTTTGTAAGGTTGGACGTGAAGACGAGGCAAAAGAACTTTTTGAGGAAATGAAAGCTCAGGGAATGATTCCCGATGTCATTTCATATAGCACCTTGATTCATGGATTTTGTTGTGCTGGAAAGTGGGAGCAGTCTAAACATTTGTTCGATGAGATGGTGGATCAAGGTGTTCAACCAGATATGGTCACATTTAGTGTGTTGATTGATACGCTTTGCAAGGAAGGAAAGGTCACTGAGGCTAAGAAGTTGCTTGAGGTCATGATTCAGAGAGGTATCGTTCCTAATTTGATTACTTATAATTCACTGATTGATGGGTTTTGTATGGTTGGTGATTTGAATAGTGCCAGAGAAGTGTTCCTTAGTATGCCAAGCAAAGGATTAGAACCTGATGAGATTAGCTACACTACACTTATTAACGGGTATTGTAAAACTTGGAAGGTGAAAGAAGCAATGAACCTTTACAATGAAATGCTTCAAGTGGGAAAGAGACCAAATGTGACAACATATGGTACCTTGTTAAAAGGACTTTTTCAGAAAGGCAAGGTTGGTGATGCAAAGAAGCTATTTGGTGTCATGAAAACTTATGGTATTTCGGCAAATTCTCAAATATATGGTATTTTCTTAGATGGGCTGTGTAAGAATGATTGTTTATTTGAAGCAATGGAACTTTTTAATGAGCTCAAATCATACAACTTCAAATTGAACATCGAAAACTACAGTTGTCTAATTGATGGCCTATGTAAAGCAGGAAAACTTGAGACTGCGTGGGAGCTTTTTGAAAAACTATCCCAAGAAGGGCTTCAACCAGATGTTGTCACTTATAACATTATGATCCATGGGTTTTGTAAAGTGGGACAAGTAGATAATGCAAATATTTTGTTTGAAAAGATGGAAGAAAATGGTTGTACTCCTGACATAATTGCTTATAATACCCTTCTTTGTGGTTTCTGCGAAGGTAATAAATTAGAGGAGGTGATTAAACTTCTCCATAAGATGGTTCAAAAGGACGTGTCACCAAATGCTGCCAGTTGCACCATAGTCGTTGACATGCTCTGTAAAGATGAAAAATATAAAAAATTTGTAGACTTGCTTCCAAAATTTCCGGTCCAAAGGCATTGA

Protein sequence

MPSKTLLPSPSFKPNLSPLSTHSSTIPSSIPQTSSTHHPNPILPAAFNREEISFHHPLSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGINCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWEQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREVFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKRPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGISANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKFPVQRH*

Homology

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BLAST of CSPI07G15960 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 2.0e-120
Identity = 241/624 (38.62%), Postives = 348/624 (55.77%), Query Frame = 0


Query: 16  LSPLSTHSSTIPSSIPQTSSTHHPNPILPAAFNREEISFHHPLSLFLRNCKTGNITAIQA 75
           L PL+  +S     + + +S  H + I  A  + +E          LRN    +I    A
Sbjct: 5   LIPLNRKASNFTQILEKGTSLLHYSSITEAKLSYKE---------RLRN-GIVDIKVNDA 64

Query: 76  FHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANC 135
              F+ M++S P+P    FNRL   +A+   Y  +      M L G+  D++T++I+ NC
Sbjct: 65  IDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINC 124

Query: 136 LCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPN 195
            C   ++  A + +    + GY P+ +T++TL+ G C+E R+SEA  L  RM ++   P+
Sbjct: 125 YCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD 184

Query: 196 AVTYGTLIKGLCQTGNVNIALKLHKEMLN-----DASQYG-------------------- 255
            VT  TLI GLC  G V+ AL L   M+      D   YG                    
Sbjct: 185 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFR 244

Query: 256 ----INCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAG 315
                N K  V+ YSI+ID LCK G  D+A  LF EM+ +G+  DV++YS+LI G C  G
Sbjct: 245 KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 304

Query: 316 KWEQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYN 375
           KW+    +  EM+ + + PD+VTFS LID   KEGK+ EAK+L   MI RGI P+ ITYN
Sbjct: 305 KWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYN 364

Query: 376 SLIDGFCMVGDLNSAREVFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQV 435
           SLIDGFC    L+ A ++F  M SKG EPD ++Y+ LIN YCK  +V + M L+ E+   
Sbjct: 365 SLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 424

Query: 436 GKRPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGISANSQIYGIFLDGLCKNDCLFEA 495
           G  PN  TY TL+ G  Q GK+  AK+LF  M + G+  +   YGI LDGLC N  L +A
Sbjct: 425 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 484

Query: 496 MELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHG 555
           +E+F +++     L I  Y+ +I G+C A K++ AW LF  LS +G++PDVVTYN+MI G
Sbjct: 485 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 544

Query: 556 FCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPN 611
            CK G +  A++LF KM+E+GCTPD   YN L+     G+ L   ++L+ +M     S +
Sbjct: 545 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 604

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BLAST of CSPI07G15960 vs. ExPASy Swiss-Prot
Match: P0C7Q7 (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.1e-115
Identity = 206/536 (38.43%), Postives = 322/536 (60.07%), Query Frame = 0


Query: 75  AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILAN 134
           A   F  M+RS P+P +  F+R    +A+   ++ +     ++ L G++ +++TL+I+ N
Sbjct: 72  AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131

Query: 135 CLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTP 194
           C C   +   A + +  +++ GY P+  T+ TLIKGL +E ++SEA  L  RM + GC P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191

Query: 195 NAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGINCKPGVITYSIIIDGLCKVGRED 254
           + VTY +++ G+C++G+ ++AL L ++M         N K  V TYS IID LC+ G  D
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEER------NVKADVFTYSTIIDSLCRDGCID 251

Query: 255 EAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWEQSKHLFDEMVDQGVQPDMVTFSVLI 314
            A  LF+EM+ +G+   V++Y++L+ G C AGKW     L  +MV + + P+++TF+VL+
Sbjct: 252 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 311

Query: 315 DTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREVFLSMPSKGLE 374
           D   KEGK+ EA +L + MI RGI PN+ITYN+L+DG+CM   L+ A  +   M      
Sbjct: 312 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 371

Query: 375 PDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKRPNVTTYGTLLKGLFQKGKVGDAKKL 434
           PD +++T+LI GYC   +V + M ++  + + G   N  TY  L++G  Q GK+  A++L
Sbjct: 372 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 431

Query: 435 FGVMKTYGISANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCK 494
           F  M ++G+  +   YGI LDGLC N  L +A+E+F +L+     L I  Y+ +I+G+CK
Sbjct: 432 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 491

Query: 495 AGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIA 554
            GK+E AW LF  L  +G++P+V+TY +MI G CK G +  ANIL  KMEE+G  P+   
Sbjct: 492 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 551

Query: 555 YNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLL 611
           YNTL+        L    KL+ +M     S +A+S  +V+DML   E  K F+D+L
Sbjct: 552 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDML 601

[Close]

BLAST of CSPI07G15960 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 2.6e-115
Identity = 226/595 (37.98%), Postives = 342/595 (57.48%), Query Frame = 0


Query: 45  AAFNREEISFHHPLSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKI 104
           +AF+   +S+   L   L + K     A  A   F  M+ S P+P +  F+RL   +AK 
Sbjct: 47  SAFSDRNLSYRERLRSGLVDIK-----ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKT 106

Query: 105 NHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTY 164
             Y  + +L  +M L G++ +L+TLSI+ NC C   ++  A +AM  I++ GY PN +T+
Sbjct: 107 KQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITF 166

Query: 165 TTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLN 224
           +TLI GLC+E R+SEA  L  RM ++G  P+ +T  TL+ GLC +G    A+ L  +M+ 
Sbjct: 167 STLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE 226

Query: 225 -----DASQYG----INCKPG--------------------VITYSIIIDGLCKVGREDE 284
                +A  YG    + CK G                     + YSIIIDGLCK G  D 
Sbjct: 227 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDN 286

Query: 285 AKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWEQSKHLFDEMVDQGVQPDMVTFSVLID 344
           A  LF EM+ +G+  ++I+Y+ LI GFC AG+W+    L  +M+ + + P++VTFSVLID
Sbjct: 287 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 346

Query: 345 TLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREVFLSMPSKGLEP 404
           +  KEGK+ EA++L + MI RGI P+ ITY SLIDGFC    L+ A ++   M SKG +P
Sbjct: 347 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 406

Query: 405 DEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKRPNVTTYGTLLKGLFQKGKVGDAKKLF 464
           +  ++  LINGYCK  ++ + + L+ +M   G   +  TY TL++G  + GK+  AK+LF
Sbjct: 407 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF 466

Query: 465 GVMKTYGISANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKA 524
             M +  +  N   Y I LDGLC N    +A+E+F +++    +L+I  Y+ +I G+C A
Sbjct: 467 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 526

Query: 525 GKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAY 584
            K++ AW+LF  L  +G++P V TYNIMI G CK G +  A +LF KMEE+G  PD   Y
Sbjct: 527 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 586

Query: 585 NTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLL 611
           N L+          + +KL+ ++ +   S +A++  +V+DML      K F+D+L
Sbjct: 587 NILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDML 636

[Close]

BLAST of CSPI07G15960 vs. ExPASy Swiss-Prot
Match: Q9LQ16 (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 9.7e-115
Identity = 225/584 (38.53%), Postives = 336/584 (57.53%), Query Frame = 0


Query: 62  LRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAG 121
           LRN  +  I    A   F  M++S P P I  FN+LL  +AK+N +  + SL  +M+  G
Sbjct: 54  LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113

Query: 122 LSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVV------------------- 181
           +S DL+T SI  NC C  +++S ALA +A +++ GY P++V                   
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173

Query: 182 ----------------TYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGL 241
                           T+TTLI GL + ++ SEA  L  +M + GC P+ VTYGT++ GL
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233

Query: 242 CQTGNVNIALKLHKEMLNDASQYGINCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQ 301
           C+ G++++AL L K+M           +  V+ Y+ IIDGLCK    D+A  LF EM  +
Sbjct: 234 CKRGDIDLALSLLKKMEKG------KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 293

Query: 302 GMIPDVISYSTLIHGFCCAGKWEQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEA 361
           G+ PDV +YS+LI   C  G+W  +  L  +M+++ + P++VTFS LID   KEGK+ EA
Sbjct: 294 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 353

Query: 362 KKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREVFLSMPSKGLEPDEISYTTLING 421
           +KL + MI+R I P++ TY+SLI+GFCM   L+ A+ +F  M SK   P+ ++Y+TLI G
Sbjct: 354 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 413

Query: 422 YCKTWKVKEAMNLYNEMLQVGKRPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGISAN 481
           +CK  +V+E M L+ EM Q G   N  TY TL+ G FQ     +A+ +F  M + G+  N
Sbjct: 414 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 473

Query: 482 SQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFE 541
              Y I LDGLCKN  L +AM +F  L+    + +I  Y+ +I+G+CKAGK+E  WELF 
Sbjct: 474 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 533

Query: 542 KLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGN 601
            LS +G+ P+V+ YN MI GFC+ G  + A+ L +KM+E+G  P+   YNTL+       
Sbjct: 534 NLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 593

Query: 602 KLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLL 611
             E   +L+ +M     + +A++  +V +ML      K F+D+L
Sbjct: 594 DREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 631

[Close]

BLAST of CSPI07G15960 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.3e-114
Identity = 227/595 (38.15%), Postives = 331/595 (55.63%), Query Frame = 0


Query: 45  AAFNREEISFHHPLSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKI 104
           + F+   +S+   LS  L   K     A  A   F  M++S P+P +  FNRL   +AK 
Sbjct: 47  STFSDRNLSYRDKLSSGLVGIK-----ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKT 106

Query: 105 NHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTY 164
             Y  + +L  +M   G++  ++TLSI+ NC C   ++S A + M  I++ GY P+ V +
Sbjct: 107 KQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIF 166

Query: 165 TTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLN 224
            TL+ GLC+E R+SEA  L  RM ++G  P  +T  TL+ GLC  G V+ A+ L   M+ 
Sbjct: 167 NTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVE 226

Query: 225 DASQ-----YG----INCKPG--------------------VITYSIIIDGLCKVGREDE 284
              Q     YG    + CK G                     + YSIIIDGLCK G  D 
Sbjct: 227 TGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDN 286

Query: 285 AKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWEQSKHLFDEMVDQGVQPDMVTFSVLID 344
           A  LF EM+ +G   D+I+Y+TLI GFC AG+W+    L  +M+ + + P++VTFSVLID
Sbjct: 287 AFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLID 346

Query: 345 TLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREVFLSMPSKGLEP 404
           +  KEGK+ EA +LL+ M+QRGI PN ITYNSLIDGFC    L  A ++   M SKG +P
Sbjct: 347 SFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP 406

Query: 405 DEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKRPNVTTYGTLLKGLFQKGKVGDAKKLF 464
           D +++  LINGYCK  ++ + + L+ EM   G   N  TY TL++G  Q GK+  AKKLF
Sbjct: 407 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 466

Query: 465 GVMKTYGISANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKA 524
             M +  +  +   Y I LDGLC N  L +A+E+F +++    +L+I  Y  +I G+C A
Sbjct: 467 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA 526

Query: 525 GKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAY 584
            K++ AW+LF  L  +G++ D   YNIMI   C+   +  A+ILF KM E G  PD + Y
Sbjct: 527 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 586

Query: 585 NTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLL 611
           N L+      +      +L+ +M       + ++  +V++ML   E  K F+D+L
Sbjct: 587 NILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDML 636

[Close]

BLAST of CSPI07G15960 vs. ExPASy TrEMBL
Match: A0A5A7UUW8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00730 PE=4 SV=1)

HSP 1 Score: 969.1 bits (2504), Expect = 8.4e-279
Identity = 467/559 (83.54%), Postives = 507/559 (90.70%), Query Frame = 0


Query: 58  LSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEM 117
           + +FLRNCKTGNITAIQAFHFFDLM+RS+PI PISSFNRLLGGLAKINHYSQLFSLYN+M
Sbjct: 7   IPIFLRNCKTGNITAIQAFHFFDLMVRSYPISPISSFNRLLGGLAKINHYSQLFSLYNKM 66

Query: 118 RLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRI 177
            LAGLSP + TL+IL NCLCNVNRVSEALAA+AGILRRGYIP++VTY TLIKGLCMEHRI
Sbjct: 67  CLAGLSPSVVTLNILVNCLCNVNRVSEALAALAGILRRGYIPDIVTYNTLIKGLCMEHRI 126

Query: 178 SEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGINCKPGV 237
           SEATRLFLRMQKLGCTPN VTYGTLIKGLCQTGNVNIALKLH+EMLND SQYGINCKP V
Sbjct: 127 SEATRLFLRMQKLGCTPNVVTYGTLIKGLCQTGNVNIALKLHQEMLNDTSQYGINCKPNV 186

Query: 238 ITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWEQSKHLFDE 297
           I+YSIIIDGLCKVGREDEAKE FEEMKAQGM+P+VISYS+LIHGFCCAGKW++SK LFDE
Sbjct: 187 ISYSIIIDGLCKVGREDEAKETFEEMKAQGMVPNVISYSSLIHGFCCAGKWDESKQLFDE 246

Query: 298 MVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGD 357
           MVDQGVQP+ VTFSVLIDTLCKEGKV EAKKLLE+MI+ GIVPN+ TYNSL+ GFCMVGD
Sbjct: 247 MVDQGVQPNKVTFSVLIDTLCKEGKVIEAKKLLELMIESGIVPNVFTYNSLLKGFCMVGD 306

Query: 358 LNSAREVFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKRPNVTTYGT 417
           LNSARE+F+SMPSKG EPD ISYT LINGYCKT KV+EAM LYN+ML VGKRPNV TYG 
Sbjct: 307 LNSARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNKMLLVGKRPNVITYGA 366

Query: 418 LLKGLFQKGKVGDAKKLFGVMKTYGISANSQIYGIFLDGLCKNDCLFEAMELFNELKSYN 477
           LL GLF  GKVGDAKKLF  MK +GI+ NS IY IFLDGLCKN CLFEAMELF +LKSYN
Sbjct: 367 LLTGLFLAGKVGDAKKLFSAMKAHGIAENSCIYSIFLDGLCKNGCLFEAMELFTKLKSYN 426

Query: 478 FKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNAN 537
           FKL IE YSCLIDGLCKAGKLETAWELFEKLSQEGLQP+VVTYNIMI GFCK G VD AN
Sbjct: 427 FKLEIETYSCLIDGLCKAGKLETAWELFEKLSQEGLQPNVVTYNIMISGFCKAGLVDKAN 486

Query: 538 ILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDML 597
           ILFEKMEENGCTP II Y+ LL  FC+ NK EEV++LLHKMVQ+DVSP+ + CTIVVDML
Sbjct: 487 ILFEKMEENGCTPSIITYDILLRRFCQSNKSEEVVRLLHKMVQRDVSPDVSICTIVVDML 546

Query: 598 CKDEKYKKFVDLLPKFPVQ 617
           CKDEKYK+ +DLLP+FPVQ
Sbjct: 547 CKDEKYKECLDLLPRFPVQ 565

[Close]

BLAST of CSPI07G15960 vs. ExPASy TrEMBL
Match: A0A1S4DYL6 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103492586 PE=4 SV=1)

HSP 1 Score: 956.1 bits (2470), Expect = 7.4e-275
Identity = 460/561 (82.00%), Postives = 502/561 (89.48%), Query Frame = 0


Query: 58  LSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEM 117
           + +FLRNCKTGNITA QAFHFFDLM+RS+PIPPISSF+ LLGGLAKI HYS LFSLYN+M
Sbjct: 7   IPIFLRNCKTGNITATQAFHFFDLMLRSYPIPPISSFDCLLGGLAKIKHYSLLFSLYNKM 66

Query: 118 RLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRI 177
           RLAGLSP   TL+IL NCLCNVNRVSEALA MAG+LRRGYIPNVVTYTTLIKGLCMEHRI
Sbjct: 67  RLAGLSPSAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVTYTTLIKGLCMEHRI 126

Query: 178 SEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGINCKPGV 237
           SEATRLFLRMQKLGCTPN VTYGTL+KGLCQTGNVNIALKLH+EMLND SQYGINCKP V
Sbjct: 127 SEATRLFLRMQKLGCTPNVVTYGTLVKGLCQTGNVNIALKLHQEMLNDTSQYGINCKPNV 186

Query: 238 ITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWEQSKHLFDE 297
             Y+IIIDGLCKVGREDEA ELFEEMKAQGMIP+VISYS+LIHGFCCA KWE+SK LFDE
Sbjct: 187 FNYNIIIDGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIHGFCCARKWEESKRLFDE 246

Query: 298 MVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGD 357
           MVDQGVQPD VTFSVLIDTLCKEGKV EAKKL EVMIQRGIVP+L  Y+SL++GFCMVGD
Sbjct: 247 MVDQGVQPDKVTFSVLIDTLCKEGKVIEAKKLFEVMIQRGIVPDLFIYSSLMEGFCMVGD 306

Query: 358 LNSAREVFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKRPNVTTYGT 417
           LNSARE+F+SMPSKG EPD ISYT LINGYCKT KV+EAM LYNEML VGKRPNV TYG 
Sbjct: 307 LNSARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEMLLVGKRPNVITYGA 366

Query: 418 LLKGLFQKGKVGDAKKLFGVMKTYGISANSQIYGIFLDGLCKNDCLFEAMELFNELKSYN 477
           LL GLF  GKVGDAKKLF  MK  GISANS IYGI LDGLCKN CLFEAM+LF ELKSYN
Sbjct: 367 LLTGLFLAGKVGDAKKLFSAMKARGISANSHIYGIILDGLCKNGCLFEAMKLFTELKSYN 426

Query: 478 FKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNAN 537
           FKL+IE YSCLIDGLCK GKLETAWELFEKLSQEGLQP+VVTY+IMIHG C+ GQVD AN
Sbjct: 427 FKLDIETYSCLIDGLCKEGKLETAWELFEKLSQEGLQPNVVTYSIMIHGLCREGQVDKAN 486

Query: 538 ILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDML 597
           +L +KME NGC P+II YNTL+ GF E NKL+EV++LLH MV+KDV P+A +C+IVVDML
Sbjct: 487 VLIQKMETNGCNPNIITYNTLMRGFYESNKLDEVVQLLHGMVKKDVLPDATTCSIVVDML 546

Query: 598 CKDEKYKKFVDLLPKFPVQRH 619
           CKDEKY++ +DLLP+F VQ+H
Sbjct: 547 CKDEKYQECLDLLPRFSVQKH 567

[Close]

BLAST of CSPI07G15960 vs. ExPASy TrEMBL
Match: A0A5D3C8J0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00440 PE=4 SV=1)

HSP 1 Score: 953.0 bits (2462), Expect = 6.3e-274
Identity = 459/561 (81.82%), Postives = 501/561 (89.30%), Query Frame = 0


Query: 58  LSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEM 117
           + +FLRNCKTGNITA QAFHFFDLM+RS+PIP ISSF+ LLGGLAKI HYS LFSLYN+M
Sbjct: 7   IPIFLRNCKTGNITATQAFHFFDLMLRSYPIPSISSFDCLLGGLAKIKHYSLLFSLYNKM 66

Query: 118 RLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRI 177
           RLAGLSP   TL+IL NCLCNVNRVSEALA MAG+LRRGYIPNVVTYTTLIKGLCMEHRI
Sbjct: 67  RLAGLSPSAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVTYTTLIKGLCMEHRI 126

Query: 178 SEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGINCKPGV 237
           SEATRLFLRMQKLGCTPN VTYGTL+KGLCQTGNVNIALKLH+EMLND SQYGINCKP V
Sbjct: 127 SEATRLFLRMQKLGCTPNVVTYGTLVKGLCQTGNVNIALKLHQEMLNDTSQYGINCKPNV 186

Query: 238 ITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWEQSKHLFDE 297
             Y+IIIDGLCKVGREDEA ELFEEMKAQGMIP+VISYS+LIHGFCCA KWE+SK LFDE
Sbjct: 187 FNYNIIIDGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIHGFCCARKWEESKRLFDE 246

Query: 298 MVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGD 357
           MVDQGVQPD VTFSVLIDTLCKEGKV EAKKL EVMIQRGIVP+L  Y+SL++GFCMVGD
Sbjct: 247 MVDQGVQPDKVTFSVLIDTLCKEGKVIEAKKLFEVMIQRGIVPDLFIYSSLMEGFCMVGD 306

Query: 358 LNSAREVFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKRPNVTTYGT 417
           LNSARE+F+SMPSKG EPD ISYT LINGYCKT KV+EAM LYNEML VGKRPNV TYG 
Sbjct: 307 LNSARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEMLLVGKRPNVITYGA 366

Query: 418 LLKGLFQKGKVGDAKKLFGVMKTYGISANSQIYGIFLDGLCKNDCLFEAMELFNELKSYN 477
           LL GLF  GKVGDAKKLF  MK  GISANS IYGI LDGLCKN CLFEAM+LF ELKSYN
Sbjct: 367 LLTGLFLAGKVGDAKKLFSAMKARGISANSHIYGIILDGLCKNGCLFEAMKLFTELKSYN 426

Query: 478 FKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNAN 537
           FKL+IE YSCLIDGLCK GKLETAWELFEKLSQEGLQP+VVTY+IMIHG C+ GQVD AN
Sbjct: 427 FKLDIETYSCLIDGLCKEGKLETAWELFEKLSQEGLQPNVVTYSIMIHGLCREGQVDKAN 486

Query: 538 ILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDML 597
           +L +KME NGC P+II YNTL+ GF E NKL+EV++LLH MV+KDV P+A +C+IVVDML
Sbjct: 487 VLIQKMETNGCNPNIITYNTLMRGFYESNKLDEVVQLLHGMVKKDVLPDATTCSIVVDML 546

Query: 598 CKDEKYKKFVDLLPKFPVQRH 619
           CKDEKY++ +DLLP+F VQ+H
Sbjct: 547 CKDEKYQECLDLLPRFSVQKH 567

[Close]

BLAST of CSPI07G15960 vs. ExPASy TrEMBL
Match: A0A5D3CCW0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00420 PE=4 SV=1)

HSP 1 Score: 864.8 bits (2233), Expect = 2.2e-247
Identity = 434/587 (73.94%), Postives = 491/587 (83.65%), Query Frame = 0


Query: 3   SKTLLPSPS--FKPNL-SPLSTHSSTIPSSIPQTSSTHHPNP--ILPAAFNREEISFHHP 62
           SKT +PS S   +PNL S L THS  IPSS PQ SS  HP    + P  FN   IS    
Sbjct: 5   SKT-VPSASSIVRPNLSSSLFTHSPIIPSSNPQFSSPIHPKSLHVSPQNFN-TPISCQQQ 64

Query: 63  LSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEM 122
           LS+FL NCKTGNITA QAFHFF LMM S+P PP+SSF  LL GL KI HYSQ+F LYN+M
Sbjct: 65  LSMFLHNCKTGNITATQAFHFFHLMMCSNPTPPLSSFTHLLSGLTKIKHYSQVFYLYNQM 124

Query: 123 RLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRI 182
           RL+GLSPD  TL+IL NCLCN+NRV E LA MAGILRRGY+P++VTYTTLIKGLCMEHRI
Sbjct: 125 RLSGLSPDCCTLNILLNCLCNLNRVGEGLAVMAGILRRGYVPDIVTYTTLIKGLCMEHRI 184

Query: 183 SEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGINCKPGV 242
           S+AT LF RMQKLGCTPNA+TYGTLIKGLC+TGN+++ALKLH+EMLND  +YGIN KP V
Sbjct: 185 SKATLLFTRMQKLGCTPNAITYGTLIKGLCRTGNIDVALKLHQEMLNDTGRYGINFKPIV 244

Query: 243 ITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWEQSKHLFDE 302
           ++Y+IIID LCK  REDEA+ELFEEMKAQGMIP VISY++LIHGFCC GKWE++K LF+E
Sbjct: 245 VSYTIIIDALCKDRREDEARELFEEMKAQGMIPSVISYTSLIHGFCCGGKWEEAKRLFNE 304

Query: 303 MVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGD 362
           MV+QG+QP++VTF+VLID LCKEGKV EAK LLEVMIQRG VPNL+TYNSLI+GFC+VGD
Sbjct: 305 MVNQGIQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGSVPNLLTYNSLIEGFCLVGD 364

Query: 363 LNSAREVFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKRPNVTTYGT 422
           LNSARE+F SM SKG EPD I YT LINGYCKT KV+EAM +YN MLQVGKRP+V TYG 
Sbjct: 365 LNSARELFFSMLSKGCEPDVICYTVLINGYCKTSKVEEAMKIYNGMLQVGKRPDVKTYGA 424

Query: 423 LLKGLFQKGKVGDAKKLFGVMKTYGISANSQIYGIFLDGLCKNDCLFEAMELFNELKSYN 482
           LL+GLFQ GKVGDAKKLFGVMK YGI  +  IYGIFL+GLCKN CLFEAMELFN+LKSYN
Sbjct: 425 LLRGLFQGGKVGDAKKLFGVMKVYGIPEDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYN 484

Query: 483 FKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNAN 542
            KL+IE ++CLIDGLCKAGKLETAWELFEKLSQ  LQPDVVTYNIMIH FC+ GQVD AN
Sbjct: 485 MKLDIECFNCLIDGLCKAGKLETAWELFEKLSQGDLQPDVVTYNIMIHEFCRGGQVDKAN 544

Query: 543 ILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVS 585
           ILF+KME+NGCTPD I Y  LL GF E  K E+V++LLH MVQ+DVS
Sbjct: 545 ILFQKMEKNGCTPDRITYTALLRGFFESKKSEKVVELLHMMVQRDVS 589

[Close]

BLAST of CSPI07G15960 vs. ExPASy TrEMBL
Match: A0A1S4DYL3 (pentatricopeptide repeat-containing protein At1g63330-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492587 PE=4 SV=1)

HSP 1 Score: 863.2 bits (2229), Expect = 6.5e-247
Identity = 433/587 (73.76%), Postives = 492/587 (83.82%), Query Frame = 0


Query: 3   SKTLLPSPS--FKPNL-SPLSTHSSTIPSSIPQTSSTHHPNP--ILPAAFNREEISFHHP 62
           SKT +PS S   +PNL S L THS  IPSS PQ SS  HP    + P  FN   IS    
Sbjct: 5   SKT-VPSASSIVRPNLSSSLFTHSPIIPSSNPQFSSPIHPKSLHVSPQNFN-TPISCQQQ 64

Query: 63  LSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEM 122
           LS+FL NCKTGNITA QAFHFF LMM S+P PP+SSF  LL GL KI HYSQ+F LYN+M
Sbjct: 65  LSMFLHNCKTGNITATQAFHFFHLMMCSNPTPPLSSFTHLLSGLTKIKHYSQVFYLYNQM 124

Query: 123 RLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRI 182
           RL+GLSPD  TL+IL NCLCN+NRV E LA MAGILRRGY+P++VTYTTLIKGLCMEHRI
Sbjct: 125 RLSGLSPDCCTLNILLNCLCNLNRVGEGLAVMAGILRRGYVPDIVTYTTLIKGLCMEHRI 184

Query: 183 SEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGINCKPGV 242
           S+AT LF RMQKLGCTPNA+TYGTLIKGLC+TGN+++ALKLH+EMLN+ S+YGIN KP V
Sbjct: 185 SKATLLFTRMQKLGCTPNAITYGTLIKGLCRTGNIDVALKLHQEMLNETSRYGINFKPIV 244

Query: 243 ITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWEQSKHLFDE 302
           ++Y+IIID LCK  REDEA+ELFEEMKAQGMIP VISY++LIHGFCC GKWE++K LF+E
Sbjct: 245 VSYTIIIDALCKDRREDEARELFEEMKAQGMIPSVISYTSLIHGFCCGGKWEEAKRLFNE 304

Query: 303 MVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGD 362
           MV+QG+QP++VTF+VLID LCKEGKV EAK LLEVMIQRG VPNL+TYNSLI+GFC+VGD
Sbjct: 305 MVNQGIQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGSVPNLLTYNSLIEGFCLVGD 364

Query: 363 LNSAREVFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKRPNVTTYGT 422
           LNSARE+F SM SKG EPD I YT LINGYCKT KV+EAM +YN MLQVGKRP+V TYG 
Sbjct: 365 LNSARELFFSMLSKGCEPDVICYTVLINGYCKTSKVEEAMKIYNGMLQVGKRPDVKTYGA 424

Query: 423 LLKGLFQKGKVGDAKKLFGVMKTYGISANSQIYGIFLDGLCKNDCLFEAMELFNELKSYN 482
           LL+GLFQ GKVGDAKKLFGVMK YGI  +  IYGIFL+GLCKN CLFEAMELFN+LKSYN
Sbjct: 425 LLRGLFQGGKVGDAKKLFGVMKVYGIPEDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYN 484

Query: 483 FKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNAN 542
            KL+IE ++CLIDGLCKAGKLETAWELF+KLSQ  LQPDVVTYNIMIH FC+ GQVD AN
Sbjct: 485 MKLDIECFNCLIDGLCKAGKLETAWELFKKLSQGDLQPDVVTYNIMIHEFCRGGQVDKAN 544

Query: 543 ILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVS 585
           ILF+KME+NGCTPD I Y  LL GF E  K E+V++LLH MVQ+DVS
Sbjct: 545 ILFQKMEKNGCTPDRITYTALLRGFFESKKSEKVVELLHMMVQRDVS 589

[Close]

BLAST of CSPI07G15960 vs. NCBI nr
Match: XP_011659273.2 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial [Cucumis sativus] >KAE8646303.1 hypothetical protein Csa_016074 [Cucumis sativus])

HSP 1 Score: 1258.0 bits (3254), Expect = 0.0e+00
Identity = 614/618 (99.35%), Postives = 618/618 (100.00%), Query Frame = 0


Query: 1   MPSKTLLPSPSFKPNLSPLSTHSSTIPSSIPQTSSTHHPNPILPAAFNREEISFHHPLSL 60
           MPSKTLLPSPSFKPNLSPLSTHSSTIPSSIPQTSSTHHPNPILPAAFNREEISFHHPLSL
Sbjct: 1   MPSKTLLPSPSFKPNLSPLSTHSSTIPSSIPQTSSTHHPNPILPAAFNREEISFHHPLSL 60

Query: 61  FLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLA 120
           FLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLA
Sbjct: 61  FLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLA 120

Query: 121 GLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEA 180
           GLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEA
Sbjct: 121 GLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEA 180

Query: 181 TRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGINCKPGVITY 240
           TRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYG+NCKPGVITY
Sbjct: 181 TRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITY 240

Query: 241 SIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWEQSKHLFDEMVD 300
           SIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKW+QSKHLFDEMVD
Sbjct: 241 SIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVD 300

Query: 301 QGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNS 360
           QGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNS
Sbjct: 301 QGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNS 360

Query: 361 AREVFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKRPNVTTYGTLLK 420
           ARE+FLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKRPNVTTYGTLLK
Sbjct: 361 ARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKRPNVTTYGTLLK 420

Query: 421 GLFQKGKVGDAKKLFGVMKTYGISANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKL 480
           GLFQKGKVGDAKKLFGVMKTYG+SANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKL
Sbjct: 421 GLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKL 480

Query: 481 NIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILF 540
           NIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILF
Sbjct: 481 NIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILF 540

Query: 541 EKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKD 600
           EKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKD
Sbjct: 541 EKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKD 600

Query: 601 EKYKKFVDLLPKFPVQRH 619
           EKYKKFVDLLPKFPVQRH
Sbjct: 601 EKYKKFVDLLPKFPVQRH 618

[Close]

BLAST of CSPI07G15960 vs. NCBI nr
Match: KGN45331.2 (hypothetical protein Csa_015776 [Cucumis sativus])

HSP 1 Score: 1064.3 bits (2751), Expect = 4.0e-307
Identity = 522/616 (84.74%), Postives = 567/616 (92.05%), Query Frame = 0


Query: 1   MPSKTLLPSPSFKPNLSPLSTHSSTIPSSIPQTSSTHHPNPILPAAFNREEISFHHPLSL 60
           M SKTLLPS SFKPNLSPL T SSTIPSSIPQTSST+HPN +LPAAFNR+ ISFHHPLSL
Sbjct: 1   MHSKTLLPSASFKPNLSPLCTLSSTIPSSIPQTSSTNHPNTVLPAAFNRKGISFHHPLSL 60

Query: 61  FLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLA 120
           FLRNCKTGNITA QAFHFFDLM+RS+PIPPISSFN LLGGLAKINHYSQLFSLYN+MRLA
Sbjct: 61  FLRNCKTGNITATQAFHFFDLMLRSYPIPPISSFNCLLGGLAKINHYSQLFSLYNKMRLA 120

Query: 121 GLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEA 180
           GLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTY TLIKGLCMEHRISEA
Sbjct: 121 GLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYNTLIKGLCMEHRISEA 180

Query: 181 TRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGINCKPGVITY 240
           TR FLRMQKLGCTPN VTYGTLIKGLC+TGN+N+ALKL++EMLN AS YGINCKP VITY
Sbjct: 181 TRFFLRMQKLGCTPNVVTYGTLIKGLCRTGNINMALKLYQEMLNYASHYGINCKPDVITY 240

Query: 241 SIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWEQSKHLFDEMVD 300
           SIIIDGLCKVGR+DEAKELFE+MKAQGMIP+VISYS+LIHG CCAGKWE+SK LFDEM D
Sbjct: 241 SIIIDGLCKVGRDDEAKELFEKMKAQGMIPNVISYSSLIHGLCCAGKWEESKRLFDEMWD 300

Query: 301 QGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNS 360
           +GVQPD VTF+VLI TL KEGKV+EAKKLLEVMIQRGIVP+L+TYNS+I  FC VG L+S
Sbjct: 301 EGVQPDKVTFNVLIHTLSKEGKVSEAKKLLEVMIQRGIVPDLVTYNSVIHAFCKVGHLDS 360

Query: 361 AREVFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKRPNVTTYGTLLK 420
           ARE+FLSMPSKG + DEISY  LINGYCKT KV+EAMNLYNEMLQVGKRPN TTYGTLL 
Sbjct: 361 ARELFLSMPSKGCKHDEISYNILINGYCKTSKVEEAMNLYNEMLQVGKRPNATTYGTLLT 420

Query: 421 GLFQKGKVGDAKKLFGVMKTYGISANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKL 480
           GLFQ GKVGDAKKLF V+KTYGISA+S IY IFLDGLCKN CL+EAME FN+LKSYN KL
Sbjct: 421 GLFQTGKVGDAKKLFRVLKTYGISADSCIYRIFLDGLCKNGCLYEAMEHFNQLKSYNIKL 480

Query: 481 NIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILF 540
           +IE+Y+CLIDGLCKAGKLETAWELFEKL QEGLQ DVVTYNIMIHGFCKVGQVD ANILF
Sbjct: 481 DIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVVTYNIMIHGFCKVGQVDKANILF 540

Query: 541 EKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKD 600
           EKMEENGCTPDII YNTLLCGFC+ NK +EV+KLLHKM+Q+D+SP+A SC IV+DML KD
Sbjct: 541 EKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKMIQRDMSPDAISCNIVIDMLRKD 600

Query: 601 EKYKKFVDLLPKFPVQ 617
           EKY++ +DLLP+F VQ
Sbjct: 601 EKYQECLDLLPRFLVQ 616

[Close]

BLAST of CSPI07G15960 vs. NCBI nr
Match: KAA0059713.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK26151.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 969.1 bits (2504), Expect = 1.7e-278
Identity = 467/559 (83.54%), Postives = 507/559 (90.70%), Query Frame = 0


Query: 58  LSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEM 117
           + +FLRNCKTGNITAIQAFHFFDLM+RS+PI PISSFNRLLGGLAKINHYSQLFSLYN+M
Sbjct: 7   IPIFLRNCKTGNITAIQAFHFFDLMVRSYPISPISSFNRLLGGLAKINHYSQLFSLYNKM 66

Query: 118 RLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRI 177
            LAGLSP + TL+IL NCLCNVNRVSEALAA+AGILRRGYIP++VTY TLIKGLCMEHRI
Sbjct: 67  CLAGLSPSVVTLNILVNCLCNVNRVSEALAALAGILRRGYIPDIVTYNTLIKGLCMEHRI 126

Query: 178 SEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGINCKPGV 237
           SEATRLFLRMQKLGCTPN VTYGTLIKGLCQTGNVNIALKLH+EMLND SQYGINCKP V
Sbjct: 127 SEATRLFLRMQKLGCTPNVVTYGTLIKGLCQTGNVNIALKLHQEMLNDTSQYGINCKPNV 186

Query: 238 ITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWEQSKHLFDE 297
           I+YSIIIDGLCKVGREDEAKE FEEMKAQGM+P+VISYS+LIHGFCCAGKW++SK LFDE
Sbjct: 187 ISYSIIIDGLCKVGREDEAKETFEEMKAQGMVPNVISYSSLIHGFCCAGKWDESKQLFDE 246

Query: 298 MVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGD 357
           MVDQGVQP+ VTFSVLIDTLCKEGKV EAKKLLE+MI+ GIVPN+ TYNSL+ GFCMVGD
Sbjct: 247 MVDQGVQPNKVTFSVLIDTLCKEGKVIEAKKLLELMIESGIVPNVFTYNSLLKGFCMVGD 306

Query: 358 LNSAREVFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKRPNVTTYGT 417
           LNSARE+F+SMPSKG EPD ISYT LINGYCKT KV+EAM LYN+ML VGKRPNV TYG 
Sbjct: 307 LNSARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNKMLLVGKRPNVITYGA 366

Query: 418 LLKGLFQKGKVGDAKKLFGVMKTYGISANSQIYGIFLDGLCKNDCLFEAMELFNELKSYN 477
           LL GLF  GKVGDAKKLF  MK +GI+ NS IY IFLDGLCKN CLFEAMELF +LKSYN
Sbjct: 367 LLTGLFLAGKVGDAKKLFSAMKAHGIAENSCIYSIFLDGLCKNGCLFEAMELFTKLKSYN 426

Query: 478 FKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNAN 537
           FKL IE YSCLIDGLCKAGKLETAWELFEKLSQEGLQP+VVTYNIMI GFCK G VD AN
Sbjct: 427 FKLEIETYSCLIDGLCKAGKLETAWELFEKLSQEGLQPNVVTYNIMISGFCKAGLVDKAN 486

Query: 538 ILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDML 597
           ILFEKMEENGCTP II Y+ LL  FC+ NK EEV++LLHKMVQ+DVSP+ + CTIVVDML
Sbjct: 487 ILFEKMEENGCTPSIITYDILLRRFCQSNKSEEVVRLLHKMVQRDVSPDVSICTIVVDML 546

Query: 598 CKDEKYKKFVDLLPKFPVQ 617
           CKDEKYK+ +DLLP+FPVQ
Sbjct: 547 CKDEKYKECLDLLPRFPVQ 565

[Close]

BLAST of CSPI07G15960 vs. NCBI nr
Match: XP_008451225.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucumis melo] >XP_016901074.1 PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucumis melo])

HSP 1 Score: 956.1 bits (2470), Expect = 1.5e-274
Identity = 460/561 (82.00%), Postives = 502/561 (89.48%), Query Frame = 0


Query: 58  LSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEM 117
           + +FLRNCKTGNITA QAFHFFDLM+RS+PIPPISSF+ LLGGLAKI HYS LFSLYN+M
Sbjct: 7   IPIFLRNCKTGNITATQAFHFFDLMLRSYPIPPISSFDCLLGGLAKIKHYSLLFSLYNKM 66

Query: 118 RLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRI 177
           RLAGLSP   TL+IL NCLCNVNRVSEALA MAG+LRRGYIPNVVTYTTLIKGLCMEHRI
Sbjct: 67  RLAGLSPSAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVTYTTLIKGLCMEHRI 126

Query: 178 SEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGINCKPGV 237
           SEATRLFLRMQKLGCTPN VTYGTL+KGLCQTGNVNIALKLH+EMLND SQYGINCKP V
Sbjct: 127 SEATRLFLRMQKLGCTPNVVTYGTLVKGLCQTGNVNIALKLHQEMLNDTSQYGINCKPNV 186

Query: 238 ITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWEQSKHLFDE 297
             Y+IIIDGLCKVGREDEA ELFEEMKAQGMIP+VISYS+LIHGFCCA KWE+SK LFDE
Sbjct: 187 FNYNIIIDGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIHGFCCARKWEESKRLFDE 246

Query: 298 MVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGD 357
           MVDQGVQPD VTFSVLIDTLCKEGKV EAKKL EVMIQRGIVP+L  Y+SL++GFCMVGD
Sbjct: 247 MVDQGVQPDKVTFSVLIDTLCKEGKVIEAKKLFEVMIQRGIVPDLFIYSSLMEGFCMVGD 306

Query: 358 LNSAREVFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKRPNVTTYGT 417
           LNSARE+F+SMPSKG EPD ISYT LINGYCKT KV+EAM LYNEML VGKRPNV TYG 
Sbjct: 307 LNSARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEMLLVGKRPNVITYGA 366

Query: 418 LLKGLFQKGKVGDAKKLFGVMKTYGISANSQIYGIFLDGLCKNDCLFEAMELFNELKSYN 477
           LL GLF  GKVGDAKKLF  MK  GISANS IYGI LDGLCKN CLFEAM+LF ELKSYN
Sbjct: 367 LLTGLFLAGKVGDAKKLFSAMKARGISANSHIYGIILDGLCKNGCLFEAMKLFTELKSYN 426

Query: 478 FKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNAN 537
           FKL+IE YSCLIDGLCK GKLETAWELFEKLSQEGLQP+VVTY+IMIHG C+ GQVD AN
Sbjct: 427 FKLDIETYSCLIDGLCKEGKLETAWELFEKLSQEGLQPNVVTYSIMIHGLCREGQVDKAN 486

Query: 538 ILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDML 597
           +L +KME NGC P+II YNTL+ GF E NKL+EV++LLH MV+KDV P+A +C+IVVDML
Sbjct: 487 VLIQKMETNGCNPNIITYNTLMRGFYESNKLDEVVQLLHGMVKKDVLPDATTCSIVVDML 546

Query: 598 CKDEKYKKFVDLLPKFPVQRH 619
           CKDEKY++ +DLLP+F VQ+H
Sbjct: 547 CKDEKYQECLDLLPRFSVQKH 567

[Close]

BLAST of CSPI07G15960 vs. NCBI nr
Match: KAA0059628.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK08161.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 953.0 bits (2462), Expect = 1.3e-273
Identity = 459/561 (81.82%), Postives = 501/561 (89.30%), Query Frame = 0


Query: 58  LSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEM 117
           + +FLRNCKTGNITA QAFHFFDLM+RS+PIP ISSF+ LLGGLAKI HYS LFSLYN+M
Sbjct: 7   IPIFLRNCKTGNITATQAFHFFDLMLRSYPIPSISSFDCLLGGLAKIKHYSLLFSLYNKM 66

Query: 118 RLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRI 177
           RLAGLSP   TL+IL NCLCNVNRVSEALA MAG+LRRGYIPNVVTYTTLIKGLCMEHRI
Sbjct: 67  RLAGLSPSAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVTYTTLIKGLCMEHRI 126

Query: 178 SEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGINCKPGV 237
           SEATRLFLRMQKLGCTPN VTYGTL+KGLCQTGNVNIALKLH+EMLND SQYGINCKP V
Sbjct: 127 SEATRLFLRMQKLGCTPNVVTYGTLVKGLCQTGNVNIALKLHQEMLNDTSQYGINCKPNV 186

Query: 238 ITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWEQSKHLFDE 297
             Y+IIIDGLCKVGREDEA ELFEEMKAQGMIP+VISYS+LIHGFCCA KWE+SK LFDE
Sbjct: 187 FNYNIIIDGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIHGFCCARKWEESKRLFDE 246

Query: 298 MVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGD 357
           MVDQGVQPD VTFSVLIDTLCKEGKV EAKKL EVMIQRGIVP+L  Y+SL++GFCMVGD
Sbjct: 247 MVDQGVQPDKVTFSVLIDTLCKEGKVIEAKKLFEVMIQRGIVPDLFIYSSLMEGFCMVGD 306

Query: 358 LNSAREVFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKRPNVTTYGT 417
           LNSARE+F+SMPSKG EPD ISYT LINGYCKT KV+EAM LYNEML VGKRPNV TYG 
Sbjct: 307 LNSARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEMLLVGKRPNVITYGA 366

Query: 418 LLKGLFQKGKVGDAKKLFGVMKTYGISANSQIYGIFLDGLCKNDCLFEAMELFNELKSYN 477
           LL GLF  GKVGDAKKLF  MK  GISANS IYGI LDGLCKN CLFEAM+LF ELKSYN
Sbjct: 367 LLTGLFLAGKVGDAKKLFSAMKARGISANSHIYGIILDGLCKNGCLFEAMKLFTELKSYN 426

Query: 478 FKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNAN 537
           FKL+IE YSCLIDGLCK GKLETAWELFEKLSQEGLQP+VVTY+IMIHG C+ GQVD AN
Sbjct: 427 FKLDIETYSCLIDGLCKEGKLETAWELFEKLSQEGLQPNVVTYSIMIHGLCREGQVDKAN 486

Query: 538 ILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDML 597
           +L +KME NGC P+II YNTL+ GF E NKL+EV++LLH MV+KDV P+A +C+IVVDML
Sbjct: 487 VLIQKMETNGCNPNIITYNTLMRGFYESNKLDEVVQLLHGMVKKDVLPDATTCSIVVDML 546

Query: 598 CKDEKYKKFVDLLPKFPVQRH 619
           CKDEKY++ +DLLP+F VQ+H
Sbjct: 547 CKDEKYQECLDLLPRFSVQKH 567

[Close]

BLAST of CSPI07G15960 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 434.5 bits (1116), Expect = 1.4e-121
Identity = 241/624 (38.62%), Postives = 348/624 (55.77%), Query Frame = 0


Query: 16  LSPLSTHSSTIPSSIPQTSSTHHPNPILPAAFNREEISFHHPLSLFLRNCKTGNITAIQA 75
           L PL+  +S     + + +S  H + I  A  + +E          LRN    +I    A
Sbjct: 5   LIPLNRKASNFTQILEKGTSLLHYSSITEAKLSYKE---------RLRN-GIVDIKVNDA 64

Query: 76  FHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANC 135
              F+ M++S P+P    FNRL   +A+   Y  +      M L G+  D++T++I+ NC
Sbjct: 65  IDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINC 124

Query: 136 LCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPN 195
            C   ++  A + +    + GY P+ +T++TL+ G C+E R+SEA  L  RM ++   P+
Sbjct: 125 YCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD 184

Query: 196 AVTYGTLIKGLCQTGNVNIALKLHKEMLN-----DASQYG-------------------- 255
            VT  TLI GLC  G V+ AL L   M+      D   YG                    
Sbjct: 185 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFR 244

Query: 256 ----INCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAG 315
                N K  V+ YSI+ID LCK G  D+A  LF EM+ +G+  DV++YS+LI G C  G
Sbjct: 245 KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 304

Query: 316 KWEQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYN 375
           KW+    +  EM+ + + PD+VTFS LID   KEGK+ EAK+L   MI RGI P+ ITYN
Sbjct: 305 KWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYN 364

Query: 376 SLIDGFCMVGDLNSAREVFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQV 435
           SLIDGFC    L+ A ++F  M SKG EPD ++Y+ LIN YCK  +V + M L+ E+   
Sbjct: 365 SLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 424

Query: 436 GKRPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGISANSQIYGIFLDGLCKNDCLFEA 495
           G  PN  TY TL+ G  Q GK+  AK+LF  M + G+  +   YGI LDGLC N  L +A
Sbjct: 425 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 484

Query: 496 MELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHG 555
           +E+F +++     L I  Y+ +I G+C A K++ AW LF  LS +G++PDVVTYN+MI G
Sbjct: 485 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 544

Query: 556 FCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPN 611
            CK G +  A++LF KM+E+GCTPD   YN L+     G+ L   ++L+ +M     S +
Sbjct: 545 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 604

[Close]

BLAST of CSPI07G15960 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 417.5 bits (1072), Expect = 1.8e-116
Identity = 226/595 (37.98%), Postives = 342/595 (57.48%), Query Frame = 0


Query: 45  AAFNREEISFHHPLSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKI 104
           +AF+   +S+   L   L + K     A  A   F  M+ S P+P +  F+RL   +AK 
Sbjct: 47  SAFSDRNLSYRERLRSGLVDIK-----ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKT 106

Query: 105 NHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTY 164
             Y  + +L  +M L G++ +L+TLSI+ NC C   ++  A +AM  I++ GY PN +T+
Sbjct: 107 KQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITF 166

Query: 165 TTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLN 224
           +TLI GLC+E R+SEA  L  RM ++G  P+ +T  TL+ GLC +G    A+ L  +M+ 
Sbjct: 167 STLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE 226

Query: 225 -----DASQYG----INCKPG--------------------VITYSIIIDGLCKVGREDE 284
                +A  YG    + CK G                     + YSIIIDGLCK G  D 
Sbjct: 227 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDN 286

Query: 285 AKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWEQSKHLFDEMVDQGVQPDMVTFSVLID 344
           A  LF EM+ +G+  ++I+Y+ LI GFC AG+W+    L  +M+ + + P++VTFSVLID
Sbjct: 287 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 346

Query: 345 TLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREVFLSMPSKGLEP 404
           +  KEGK+ EA++L + MI RGI P+ ITY SLIDGFC    L+ A ++   M SKG +P
Sbjct: 347 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 406

Query: 405 DEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKRPNVTTYGTLLKGLFQKGKVGDAKKLF 464
           +  ++  LINGYCK  ++ + + L+ +M   G   +  TY TL++G  + GK+  AK+LF
Sbjct: 407 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF 466

Query: 465 GVMKTYGISANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKA 524
             M +  +  N   Y I LDGLC N    +A+E+F +++    +L+I  Y+ +I G+C A
Sbjct: 467 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 526

Query: 525 GKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAY 584
            K++ AW+LF  L  +G++P V TYNIMI G CK G +  A +LF KMEE+G  PD   Y
Sbjct: 527 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 586

Query: 585 NTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLL 611
           N L+          + +KL+ ++ +   S +A++  +V+DML      K F+D+L
Sbjct: 587 NILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDML 636

[Close]

BLAST of CSPI07G15960 vs. TAIR 10
Match: AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 415.6 bits (1067), Expect = 6.9e-116
Identity = 225/584 (38.53%), Postives = 336/584 (57.53%), Query Frame = 0


Query: 62  LRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAG 121
           LRN  +  I    A   F  M++S P P I  FN+LL  +AK+N +  + SL  +M+  G
Sbjct: 54  LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113

Query: 122 LSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVV------------------- 181
           +S DL+T SI  NC C  +++S ALA +A +++ GY P++V                   
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173

Query: 182 ----------------TYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGL 241
                           T+TTLI GL + ++ SEA  L  +M + GC P+ VTYGT++ GL
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233

Query: 242 CQTGNVNIALKLHKEMLNDASQYGINCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQ 301
           C+ G++++AL L K+M           +  V+ Y+ IIDGLCK    D+A  LF EM  +
Sbjct: 234 CKRGDIDLALSLLKKMEKG------KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 293

Query: 302 GMIPDVISYSTLIHGFCCAGKWEQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEA 361
           G+ PDV +YS+LI   C  G+W  +  L  +M+++ + P++VTFS LID   KEGK+ EA
Sbjct: 294 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 353

Query: 362 KKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREVFLSMPSKGLEPDEISYTTLING 421
           +KL + MI+R I P++ TY+SLI+GFCM   L+ A+ +F  M SK   P+ ++Y+TLI G
Sbjct: 354 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 413

Query: 422 YCKTWKVKEAMNLYNEMLQVGKRPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGISAN 481
           +CK  +V+E M L+ EM Q G   N  TY TL+ G FQ     +A+ +F  M + G+  N
Sbjct: 414 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 473

Query: 482 SQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFE 541
              Y I LDGLCKN  L +AM +F  L+    + +I  Y+ +I+G+CKAGK+E  WELF 
Sbjct: 474 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 533

Query: 542 KLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGN 601
            LS +G+ P+V+ YN MI GFC+ G  + A+ L +KM+E+G  P+   YNTL+       
Sbjct: 534 NLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 593

Query: 602 KLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLL 611
             E   +L+ +M     + +A++  +V +ML      K F+D+L
Sbjct: 594 DREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 631

[Close]

BLAST of CSPI07G15960 vs. TAIR 10
Match: AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 415.2 bits (1066), Expect = 9.0e-116
Identity = 227/595 (38.15%), Postives = 331/595 (55.63%), Query Frame = 0


Query: 45  AAFNREEISFHHPLSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKI 104
           + F+   +S+   LS  L   K     A  A   F  M++S P+P +  FNRL   +AK 
Sbjct: 47  STFSDRNLSYRDKLSSGLVGIK-----ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKT 106

Query: 105 NHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTY 164
             Y  + +L  +M   G++  ++TLSI+ NC C   ++S A + M  I++ GY P+ V +
Sbjct: 107 KQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIF 166

Query: 165 TTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLN 224
            TL+ GLC+E R+SEA  L  RM ++G  P  +T  TL+ GLC  G V+ A+ L   M+ 
Sbjct: 167 NTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVE 226

Query: 225 DASQ-----YG----INCKPG--------------------VITYSIIIDGLCKVGREDE 284
              Q     YG    + CK G                     + YSIIIDGLCK G  D 
Sbjct: 227 TGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDN 286

Query: 285 AKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWEQSKHLFDEMVDQGVQPDMVTFSVLID 344
           A  LF EM+ +G   D+I+Y+TLI GFC AG+W+    L  +M+ + + P++VTFSVLID
Sbjct: 287 AFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLID 346

Query: 345 TLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREVFLSMPSKGLEP 404
           +  KEGK+ EA +LL+ M+QRGI PN ITYNSLIDGFC    L  A ++   M SKG +P
Sbjct: 347 SFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP 406

Query: 405 DEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKRPNVTTYGTLLKGLFQKGKVGDAKKLF 464
           D +++  LINGYCK  ++ + + L+ EM   G   N  TY TL++G  Q GK+  AKKLF
Sbjct: 407 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 466

Query: 465 GVMKTYGISANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKA 524
             M +  +  +   Y I LDGLC N  L +A+E+F +++    +L+I  Y  +I G+C A
Sbjct: 467 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA 526

Query: 525 GKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAY 584
            K++ AW+LF  L  +G++ D   YNIMI   C+   +  A+ILF KM E G  PD + Y
Sbjct: 527 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 586

Query: 585 NTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLL 611
           N L+      +      +L+ +M       + ++  +V++ML   E  K F+D+L
Sbjct: 587 NILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDML 636

[Close]

BLAST of CSPI07G15960 vs. TAIR 10
Match: AT1G12700.1 (ATP binding;nucleic acid binding;helicases )

HSP 1 Score: 409.8 bits (1052), Expect = 3.8e-114
Identity = 201/523 (38.43%), Postives = 315/523 (60.23%), Query Frame = 0


Query: 75  AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILAN 134
           A   F  M+RS P+P +  F+R    +A+   ++ +     ++ L G++ +++TL+I+ N
Sbjct: 72  AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131

Query: 135 CLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTP 194
           C C   +   A + +  +++ GY P+  T+ TLIKGL +E ++SEA  L  RM + GC P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191

Query: 195 NAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGINCKPGVITYSIIIDGLCKVGRED 254
           + VTY +++ G+C++G+ ++AL L ++M         N K  V TYS IID LC+ G  D
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEER------NVKADVFTYSTIIDSLCRDGCID 251

Query: 255 EAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWEQSKHLFDEMVDQGVQPDMVTFSVLI 314
            A  LF+EM+ +G+   V++Y++L+ G C AGKW     L  +MV + + P+++TF+VL+
Sbjct: 252 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 311

Query: 315 DTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREVFLSMPSKGLE 374
           D   KEGK+ EA +L + MI RGI PN+ITYN+L+DG+CM   L+ A  +   M      
Sbjct: 312 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 371

Query: 375 PDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKRPNVTTYGTLLKGLFQKGKVGDAKKL 434
           PD +++T+LI GYC   +V + M ++  + + G   N  TY  L++G  Q GK+  A++L
Sbjct: 372 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 431

Query: 435 FGVMKTYGISANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCK 494
           F  M ++G+  +   YGI LDGLC N  L +A+E+F +L+     L I  Y+ +I+G+CK
Sbjct: 432 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 491

Query: 495 AGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIA 554
            GK+E AW LF  L  +G++P+V+TY +MI G CK G +  ANIL  KMEE+G  P+   
Sbjct: 492 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 551

Query: 555 YNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDML 598
           YNTL+        L    KL+ +M     S +A+S  +V+DML
Sbjct: 552 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588

The following BLAST results are available for this feature:

BLAST of CSPI07G15960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQ83	2.0e-120	38.62	Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop...	[more]
P0C7Q7	1.1e-115	38.43	Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS...	[more]
Q0WKV3	2.6e-115	37.98	Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop...	[more]
Q9LQ16	9.7e-115	38.53	Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX...	[more]
Q9LPX2	1.3e-114	38.15	Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop...	[more]

BLAST of CSPI07G15960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UUW8	8.4e-279	83.54	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4DYL6	7.4e-275	82.00	pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cuc...	[more]
A0A5D3C8J0	6.3e-274	81.82	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3CCW0	2.2e-247	73.94	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4DYL3	6.5e-247	73.76	pentatricopeptide repeat-containing protein At1g63330-like isoform X3 OS=Cucumis...	[more]

BLAST of CSPI07G15960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659273.2	0.0e+00	99.35	pentatricopeptide repeat-containing protein At3g22470, mitochondrial [Cucumis sa...	[more]
KGN45331.2	4.0e-307	84.74	hypothetical protein Csa_015776 [Cucumis sativus]	[more]
KAA0059713.1	1.7e-278	83.54	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK26151...	[more]
XP_008451225.1	1.5e-274	82.00	PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-...	[more]
KAA0059628.1	1.3e-273	81.82	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK08161...	[more]

BLAST of CSPI07G15960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22470.1	1.4e-121	38.62	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G12300.1	1.8e-116	37.98	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G62910.1	6.9e-116	38.53	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G12775.1	9.0e-116	38.15	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G12700.1	3.8e-114	38.43	ATP binding;nucleic acid binding;helicases	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 544..614 e-value: 4.5E-16 score: 60.9 coord: 405..477 e-value: 1.1E-15 score: 59.6 coord: 478..543 e-value: 1.0E-23 score: 85.8 coord: 228..296 e-value: 3.1E-24 score: 87.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 297..396 e-value: 3.5E-35 score: 123.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 59..140 e-value: 1.6E-10 score: 42.6 coord: 141..227 e-value: 2.4E-24 score: 87.7
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 232..264 e-value: 3.8E-13 score: 48.9 coord: 479..507 e-value: 2.1E-8 score: 33.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 485..517 e-value: 6.2E-9 score: 33.5 coord: 273..306 e-value: 1.1E-9 score: 35.8 coord: 449..481 e-value: 1.9E-5 score: 22.5 coord: 343..377 e-value: 2.5E-9 score: 34.7 coord: 554..587 e-value: 3.2E-8 score: 31.2 coord: 414..446 e-value: 1.4E-5 score: 23.0 coord: 238..272 e-value: 5.0E-11 score: 40.1 coord: 93..125 e-value: 5.1E-4 score: 18.0 coord: 162..196 e-value: 4.1E-9 score: 34.0 coord: 308..341 e-value: 1.7E-8 score: 32.1 coord: 518..552 e-value: 1.1E-9 score: 35.8 coord: 378..412 e-value: 8.5E-7 score: 26.8 coord: 197..224 e-value: 2.2E-5 score: 22.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 159..208 e-value: 4.1E-18 score: 65.3 coord: 91..138 e-value: 1.2E-9 score: 38.2 coord: 410..459 e-value: 2.0E-10 score: 40.7 coord: 270..319 e-value: 6.7E-16 score: 58.2 coord: 340..389 e-value: 3.5E-16 score: 59.2 coord: 515..563 e-value: 5.3E-18 score: 65.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 236..270 score: 13.504379
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 125..159 score: 8.845827
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 341..375 score: 13.022082
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 90..124 score: 9.04313
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 551..585 score: 12.013642
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 306..340 score: 12.945353
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 411..445 score: 10.500983
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 195..225 score: 10.347525
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 376..410 score: 12.58363
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 271..305 score: 13.504379
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 446..480 score: 9.361008
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 160..194 score: 12.715165
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 481..515 score: 13.000159
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 516..550 score: 14.501858
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 232..376
None	No IPR available	PANTHER	PTHR47942:SF21	OS05G0275100 PROTEIN	coord: 65..272 coord: 232..376
None	No IPR available	PANTHER	PTHR47942:SF21	OS05G0275100 PROTEIN	coord: 274..450 coord: 342..536
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 274..450 coord: 342..536
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 483..606
None	No IPR available	PANTHER	PTHR47942:SF21	OS05G0275100 PROTEIN	coord: 483..606
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 65..272
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 251..556

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G15960.1	CSPI07G15960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding