Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAATGAGTTTGGAAAGAGGAAGCGTTAGAGGAAGAGCTAATTCTATCTCTTCTAGGGGCAATCACCCATCTTCTTATTCTAACCTTTCACCCTCACCAATGAGTGCAGATCAATACACCATGGATTTAGGGTTTACCACGACAACCAGATCCAGAGCAAGATCATCCGACATACAAATTGGATATAATTCCACGAAGTCATCAACTCCACCAAGGCCTTCGACTAATCTTATTCGTCCTTCTGCCTCTTCTTTATCCAATAGGGATTCTTCTACTCCTCCTACTACTTATTCGCAAGTTGTCACTCCAGATAAACGGTTTGTACCAAGATCGAAAATCAAATCTTATTTTCAAAAATTAGTTGTTGTCTATGATCCTATCATAGAACCCGAATATCAAAGTCTCACTCTAGAATATACAATGTCAAAGATTTTCCCTGACGACTTCAATTTTCTTCCTGATGACCTCAGAAAAATGAGAAAATTTTATGAGTTCATCTTAGTTGACACCAAATCAGTTGAAATAACTCATGTTCCAGACAAAAACGACTCTTCAAAGATTGCTTATTCAAAACTAAAAATTTTAAAGCAATGA
mRNA sequence
ATGTTAATGAGTTTGGAAAGAGGAAGCGTTAGAGGAAGAGCTAATTCTATCTCTTCTAGGGGCAATCACCCATCTTCTTATTCTAACCTTTCACCCTCACCAATGAGTGCAGATCAATACACCATGGATTTAGGGTTTACCACGACAACCAGATCCAGAGCAAGATCATCCGACATACAAATTGGATATAATTCCACGAAGTCATCAACTCCACCAAGGCCTTCGACTAATCTTATTCGTCCTTCTGCCTCTTCTTTATCCAATAGGGATTCTTCTACTCCTCCTACTACTTATTCGCAAGTTGTCACTCCAGATAAACGGTTTGTACCAAGATCGAAAATCAAATCTTATTTTCAAAAATTAGTTGTTGTCTATGATCCTATCATAGAACCCGAATATCAAAGTCTCACTCTAGAATATACAATGTCAAAGATTTTCCCTGACGACTTCAATTTTCTTCCTGATGACCTCAGAAAAATGAGAAAATTTTATGAGTTCATCTTAGTTGACACCAAATCAGTTGAAATAACTCATGTTCCAGACAAAAACGACTCTTCAAAGATTGCTTATTCAAAACTAAAAATTTTAAAGCAATGA
Coding sequence (CDS)
ATGTTAATGAGTTTGGAAAGAGGAAGCGTTAGAGGAAGAGCTAATTCTATCTCTTCTAGGGGCAATCACCCATCTTCTTATTCTAACCTTTCACCCTCACCAATGAGTGCAGATCAATACACCATGGATTTAGGGTTTACCACGACAACCAGATCCAGAGCAAGATCATCCGACATACAAATTGGATATAATTCCACGAAGTCATCAACTCCACCAAGGCCTTCGACTAATCTTATTCGTCCTTCTGCCTCTTCTTTATCCAATAGGGATTCTTCTACTCCTCCTACTACTTATTCGCAAGTTGTCACTCCAGATAAACGGTTTGTACCAAGATCGAAAATCAAATCTTATTTTCAAAAATTAGTTGTTGTCTATGATCCTATCATAGAACCCGAATATCAAAGTCTCACTCTAGAATATACAATGTCAAAGATTTTCCCTGACGACTTCAATTTTCTTCCTGATGACCTCAGAAAAATGAGAAAATTTTATGAGTTCATCTTAGTTGACACCAAATCAGTTGAAATAACTCATGTTCCAGACAAAAACGACTCTTCAAAGATTGCTTATTCAAAACTAAAAATTTTAAAGCAATGA
Protein sequence
MLMSLERGSVRGRANSISSRGNHPSSYSNLSPSPMSADQYTMDLGFTTTTRSRARSSDIQIGYNSTKSSTPPRPSTNLIRPSASSLSNRDSSTPPTTYSQVVTPDKRFVPRSKIKSYFQKLVVVYDPIIEPEYQSLTLEYTMSKIFPDDFNFLPDDLRKMRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKILKQ*
Homology
BLAST of CSPI07G14750 vs. ExPASy TrEMBL
Match:
A0A5A7TM80 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold592G00220 PE=4 SV=1)
HSP 1 Score: 228.4 bits (581), Expect = 2.6e-56
Identity = 128/179 (71.51%), Postives = 142/179 (79.33%), Query Frame = 0
Query: 3 MSLERGSVRGRANSISSRGNHPSSYSNLSPSPMSADQYTMDLGFTTTTRSRARSSDIQIG 62
MS ++GS RGR NS SS+GN P S SN +PSP+SADQY MDLGFTT TR +RS I IG
Sbjct: 1 MSSDKGSARGRTNSTSSKGNRPPSSSNSAPSPLSADQYAMDLGFTTVTRFISRSFGIWIG 60
Query: 63 YNSTKSSTPPRPSTNLIRPS---------ASSLSNRDSSTPPTTYSQVVTPDKRFVPRSK 122
+ T+SSTPPRPSTNLIRPS AS SNR+SSTPPTTYSQ VTPDKRFVPR +
Sbjct: 61 -SPTESSTPPRPSTNLIRPSSGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPE 120
Query: 123 IKSYFQKLVVVYDPIIEPEYQSLTLEYTMSKIFPDDFNFLPDDLRKMRKFYEFILVDTK 173
IKSYFQK +VVYDPIIE EYQSLT E T+SKIFP+DFNFL +DLRK RKFYEFIL DTK
Sbjct: 121 IKSYFQKPIVVYDPIIELEYQSLTSEETVSKIFPEDFNFLLEDLRKTRKFYEFILADTK 178
BLAST of CSPI07G14750 vs. ExPASy TrEMBL
Match:
E5GCE6 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)
HSP 1 Score: 210.7 bits (535), Expect = 5.6e-51
Identity = 119/168 (70.83%), Postives = 132/168 (78.57%), Query Frame = 0
Query: 3 MSLERGSVRGRANSISSRGNHPSSYSNLSPSPMSADQYTMDLGFTTTTRSRARSSDIQIG 62
MS E+GS RGR NS SS+G+ PSS SN PSPMSA QYTMDLGFT TRSR+R S I IG
Sbjct: 1 MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIWIG 60
Query: 63 YNSTKSSTPPRPSTNLIRPS---------ASSLSNRDSSTPPTTYSQVVTPDKRFVPRSK 122
+ T+SSTPPRPS NLIRPS AS SNR+SSTPPTTYSQ VT DKRFVPR +
Sbjct: 61 -SPTESSTPPRPSVNLIRPSGGVIQMRPPASPSSNRESSTPPTTYSQAVTLDKRFVPRPE 120
Query: 123 IKSYFQKLVVVYDPIIEPEYQSLTLEYTMSKIFPDDFNFLPDDLRKMR 162
IKSYFQK +VVYDPIIEPEYQSLTLE +SKIFP DFNFLP+DL+K +
Sbjct: 121 IKSYFQKSIVVYDPIIEPEYQSLTLEEMVSKIFPKDFNFLPEDLKKKK 167
BLAST of CSPI07G14750 vs. ExPASy TrEMBL
Match:
A0A5D3E4J4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00750 PE=4 SV=1)
HSP 1 Score: 205.7 bits (522), Expect = 1.8e-49
Identity = 116/167 (69.46%), Postives = 129/167 (77.25%), Query Frame = 0
Query: 3 MSLERGSVRGRANSISSRGNHPSSYSNLSPSPMSADQYTMDLGFTTTTRSRARSSDIQIG 62
MS ++G+ RGR NS SS+GN SS SN +PSPMSADQY MDLGFT TRSR+R S I IG
Sbjct: 1 MSSKKGNARGRTNSTSSKGNRLSSSSNSAPSPMSADQYAMDLGFTIVTRSRSRLSGIGIG 60
Query: 63 YNSTKSSTPPRPSTNLIR---------PSASSLSNRDSSTPPTTYSQVVTPDKRFVPRSK 122
+ T+SSTPPRPS NLIR P AS SNR SSTPPTTYSQ VTPDKRFVPR K
Sbjct: 61 F-PTESSTPPRPSANLIRPFGRVVQMKPPASPSSNRKSSTPPTTYSQAVTPDKRFVPRPK 120
Query: 123 IKSYFQKLVVVYDPIIEPEYQSLTLEYTMSKIFPDDFNFLPDDLRKM 161
IK YFQK +VVYDP IE EYQSLTLE +SKIFP+DFNFLP+DLRK+
Sbjct: 121 IKFYFQKSIVVYDPTIELEYQSLTLEEAVSKIFPEDFNFLPEDLRKI 166
BLAST of CSPI07G14750 vs. ExPASy TrEMBL
Match:
A0A5D3BM67 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00180 PE=4 SV=1)
HSP 1 Score: 179.5 bits (454), Expect = 1.4e-41
Identity = 100/138 (72.46%), Postives = 111/138 (80.43%), Query Frame = 0
Query: 35 MSADQYTMDLGFTTTTRSRARSSDIQIGYNSTKSSTPPRPSTNLI---------RPSASS 94
MSADQY MDLGFTT TRSR+RSS I+I +ST+SSTPPRPS NLI RP AS
Sbjct: 1 MSADQYAMDLGFTTVTRSRSRSSSIRI-ESSTESSTPPRPSANLIRPFGGAVQMRPPASP 60
Query: 95 LSNRDSSTPPTTYSQVVTPDKRFVPRSKIKSYFQKLVVVYDPIIEPEYQSLTLEYTMSKI 154
SNR+SSTPPTTYSQ VTPDKRFVPR +IKSYFQK +VVYD IIEPEYQS+TLE T+SKI
Sbjct: 61 SSNRESSTPPTTYSQTVTPDKRFVPRPEIKSYFQKSIVVYDLIIEPEYQSITLEKTVSKI 120
Query: 155 FPDDFNFLPDDLRKMRKF 164
F D+FN LP+DLRK R F
Sbjct: 121 FLDNFNLLPEDLRKTRNF 137
BLAST of CSPI07G14750 vs. ExPASy TrEMBL
Match:
A0A5A7V8F3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00300 PE=4 SV=1)
HSP 1 Score: 169.9 bits (429), Expect = 1.1e-38
Identity = 103/148 (69.59%), Postives = 115/148 (77.70%), Query Frame = 0
Query: 3 MSLERGSVRGRANSISSRGNHPSSYSNLSPSPMSADQYTMDLGFTTTTRSRARSSDIQIG 62
MS ++GS RGR NS S + N PSS SN +PSPMSA QY MDLGFT RSRARSSDI+IG
Sbjct: 1 MSTKKGSARGRTNSTSLKDNRPSS-SNFAPSPMSAYQYAMDLGFTMVIRSRARSSDIRIG 60
Query: 63 YNSTKSSTPPRPSTNLIRPS---------ASSLSNRDSSTPPTTYSQVVTPDKRFVPRSK 122
+ T+SSTP RPSTNL+RPS AS SNR+ STPPTTYSQVVTPDKRFVPR +
Sbjct: 61 -SPTESSTPHRPSTNLVRPSGEVIQMRPHASPSSNRE-STPPTTYSQVVTPDKRFVPRPE 120
Query: 123 IKSYFQKLVVVYDPIIEPEYQSLTLEYT 142
IKSYFQK +VVY+PIIE EYQSLTLE T
Sbjct: 121 IKSYFQKPIVVYNPIIESEYQSLTLEKT 145
BLAST of CSPI07G14750 vs. NCBI nr
Match:
KAA0043136.1 (putative Retrotransposon protein [Cucumis melo var. makuwa] >TYK23922.1 putative Retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 228.4 bits (581), Expect = 5.4e-56
Identity = 128/179 (71.51%), Postives = 142/179 (79.33%), Query Frame = 0
Query: 3 MSLERGSVRGRANSISSRGNHPSSYSNLSPSPMSADQYTMDLGFTTTTRSRARSSDIQIG 62
MS ++GS RGR NS SS+GN P S SN +PSP+SADQY MDLGFTT TR +RS I IG
Sbjct: 1 MSSDKGSARGRTNSTSSKGNRPPSSSNSAPSPLSADQYAMDLGFTTVTRFISRSFGIWIG 60
Query: 63 YNSTKSSTPPRPSTNLIRPS---------ASSLSNRDSSTPPTTYSQVVTPDKRFVPRSK 122
+ T+SSTPPRPSTNLIRPS AS SNR+SSTPPTTYSQ VTPDKRFVPR +
Sbjct: 61 -SPTESSTPPRPSTNLIRPSSGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRPE 120
Query: 123 IKSYFQKLVVVYDPIIEPEYQSLTLEYTMSKIFPDDFNFLPDDLRKMRKFYEFILVDTK 173
IKSYFQK +VVYDPIIE EYQSLT E T+SKIFP+DFNFL +DLRK RKFYEFIL DTK
Sbjct: 121 IKSYFQKPIVVYDPIIELEYQSLTSEETVSKIFPEDFNFLLEDLRKTRKFYEFILADTK 178
BLAST of CSPI07G14750 vs. NCBI nr
Match:
KAE8646253.1 (hypothetical protein Csa_023844, partial [Cucumis sativus])
HSP 1 Score: 215.3 bits (547), Expect = 4.7e-52
Identity = 121/154 (78.57%), Postives = 129/154 (83.77%), Query Frame = 0
Query: 13 RANSISSRGNHPSSYSNLSPSPMSADQYTMDLGFTTTTRSRARSSDIQIGYNSTKSSTPP 72
RANS SSRGN PSS SN +PSPMSADQY MDLGFTT TRSRARSS IQIG + TKSSTPP
Sbjct: 1 RANSTSSRGNRPSSSSNSAPSPMSADQYAMDLGFTTVTRSRARSSRIQIG-SPTKSSTPP 60
Query: 73 RPSTNLIRPS---------ASSLSNRDSSTPPTTYSQVVTPDKRFVPRSKIKSYFQKLVV 132
R S NLIRPS AS LSNR+SSTPPTTYSQV+TPDKRFVPR +IKSYFQK V+
Sbjct: 61 RTSANLIRPSSEVVQMRPLASPLSNRESSTPPTTYSQVITPDKRFVPRLEIKSYFQKPVI 120
Query: 133 VYDPIIEPEYQSLTLEYTMSKIFPDDFNFLPDDL 158
VYD IIEPEYQSLTLE T+SKIFPD+FNFLPDDL
Sbjct: 121 VYDSIIEPEYQSLTLEETVSKIFPDNFNFLPDDL 153
BLAST of CSPI07G14750 vs. NCBI nr
Match:
ADN34145.1 (hypothetical protein [Cucumis melo subsp. melo])
HSP 1 Score: 210.7 bits (535), Expect = 1.2e-50
Identity = 119/168 (70.83%), Postives = 132/168 (78.57%), Query Frame = 0
Query: 3 MSLERGSVRGRANSISSRGNHPSSYSNLSPSPMSADQYTMDLGFTTTTRSRARSSDIQIG 62
MS E+GS RGR NS SS+G+ PSS SN PSPMSA QYTMDLGFT TRSR+R S I IG
Sbjct: 1 MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIWIG 60
Query: 63 YNSTKSSTPPRPSTNLIRPS---------ASSLSNRDSSTPPTTYSQVVTPDKRFVPRSK 122
+ T+SSTPPRPS NLIRPS AS SNR+SSTPPTTYSQ VT DKRFVPR +
Sbjct: 61 -SPTESSTPPRPSVNLIRPSGGVIQMRPPASPSSNRESSTPPTTYSQAVTLDKRFVPRPE 120
Query: 123 IKSYFQKLVVVYDPIIEPEYQSLTLEYTMSKIFPDDFNFLPDDLRKMR 162
IKSYFQK +VVYDPIIEPEYQSLTLE +SKIFP DFNFLP+DL+K +
Sbjct: 121 IKSYFQKSIVVYDPIIEPEYQSLTLEEMVSKIFPKDFNFLPEDLKKKK 167
BLAST of CSPI07G14750 vs. NCBI nr
Match:
KAA0026217.1 (hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa] >TYK30739.1 hypothetical protein E5676_scaffold343G00750 [Cucumis melo var. makuwa])
HSP 1 Score: 205.7 bits (522), Expect = 3.7e-49
Identity = 116/167 (69.46%), Postives = 129/167 (77.25%), Query Frame = 0
Query: 3 MSLERGSVRGRANSISSRGNHPSSYSNLSPSPMSADQYTMDLGFTTTTRSRARSSDIQIG 62
MS ++G+ RGR NS SS+GN SS SN +PSPMSADQY MDLGFT TRSR+R S I IG
Sbjct: 1 MSSKKGNARGRTNSTSSKGNRLSSSSNSAPSPMSADQYAMDLGFTIVTRSRSRLSGIGIG 60
Query: 63 YNSTKSSTPPRPSTNLIR---------PSASSLSNRDSSTPPTTYSQVVTPDKRFVPRSK 122
+ T+SSTPPRPS NLIR P AS SNR SSTPPTTYSQ VTPDKRFVPR K
Sbjct: 61 F-PTESSTPPRPSANLIRPFGRVVQMKPPASPSSNRKSSTPPTTYSQAVTPDKRFVPRPK 120
Query: 123 IKSYFQKLVVVYDPIIEPEYQSLTLEYTMSKIFPDDFNFLPDDLRKM 161
IK YFQK +VVYDP IE EYQSLTLE +SKIFP+DFNFLP+DLRK+
Sbjct: 121 IKFYFQKSIVVYDPTIELEYQSLTLEEAVSKIFPEDFNFLPEDLRKI 166
BLAST of CSPI07G14750 vs. NCBI nr
Match:
KAA0066421.1 (hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa] >TYK00863.1 hypothetical protein E5676_scaffold602G00180 [Cucumis melo var. makuwa])
HSP 1 Score: 179.5 bits (454), Expect = 2.9e-41
Identity = 100/138 (72.46%), Postives = 111/138 (80.43%), Query Frame = 0
Query: 35 MSADQYTMDLGFTTTTRSRARSSDIQIGYNSTKSSTPPRPSTNLI---------RPSASS 94
MSADQY MDLGFTT TRSR+RSS I+I +ST+SSTPPRPS NLI RP AS
Sbjct: 1 MSADQYAMDLGFTTVTRSRSRSSSIRI-ESSTESSTPPRPSANLIRPFGGAVQMRPPASP 60
Query: 95 LSNRDSSTPPTTYSQVVTPDKRFVPRSKIKSYFQKLVVVYDPIIEPEYQSLTLEYTMSKI 154
SNR+SSTPPTTYSQ VTPDKRFVPR +IKSYFQK +VVYD IIEPEYQS+TLE T+SKI
Sbjct: 61 SSNRESSTPPTTYSQTVTPDKRFVPRPEIKSYFQKSIVVYDLIIEPEYQSITLEKTVSKI 120
Query: 155 FPDDFNFLPDDLRKMRKF 164
F D+FN LP+DLRK R F
Sbjct: 121 FLDNFNLLPEDLRKTRNF 137
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7TM80 | 2.6e-56 | 71.51 | Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... | [more] |
| E5GCE6 | 5.6e-51 | 70.83 | Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1 | [more] |
| A0A5D3E4J4 | 1.8e-49 | 69.46 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3BM67 | 1.4e-41 | 72.46 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7V8F3 | 1.1e-38 | 69.59 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0043136.1 | 5.4e-56 | 71.51 | putative Retrotransposon protein [Cucumis melo var. makuwa] >TYK23922.1 putative... | [more] |
| KAE8646253.1 | 4.7e-52 | 78.57 | hypothetical protein Csa_023844, partial [Cucumis sativus] | [more] |
| ADN34145.1 | 1.2e-50 | 70.83 | hypothetical protein [Cucumis melo subsp. melo] | [more] |
| KAA0026217.1 | 3.7e-49 | 69.46 | hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa] >TYK3073... | [more] |
| KAA0066421.1 | 2.9e-41 | 72.46 | hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa] >TYK0086... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
