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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ATGAACGACAGAGAGAGAGAGGGATTGCGGAAGAAAGAGTGTGCACTAAGGCGACGAGCAGTGCGGTGGGCAATTGGCGACGAGTTGAAGAAGGCTAGGCAGTCGTGGGTGCTGGCGAGGTTGAGCAGAGAGGGAGAGAGAAGAAACAGGCACTGGCAATGGAGGATGCCGGCGTGCAACGAGTAGAAGAAGGCTAGGCAGTGGTGCGTGCCCGCGTAGTTTGTAGCGAGGAGGGGGATAATAAGAAGAAGGGGAATGGGAGCGGGAAAAATAAACCGGCACAGATAGCTGTGTGGTGGCGGTGGCAACGTTAGAGAGAAAGAAAACAAGGGTGGGAAGAAAGAAGGGAATGGTTCTCGGAAATATTTTAGAAAAATAACACTTTTTTAAGTTACATTTCAAACTTGACATGCTTTCATAAAAAATTCCTAAAATTTTTTTGTCAATCAATTTCTTACCAACGATATCGAGATTCTTCACAAATTTTTTAAAAC mRNA sequence ATGAACGACAGAGAGAGAGAGGGATTGCGGAAGAAAGAGTGTGCACTAAGGCGACGAGCAGTGCGGTGGGCAATTGGCGACGAGTTGAAGAAGGCTAGGCAGTCGTGGGTGCTGGCGAGGTTGAGCAGAGAGGGAGAGAGAAGAAACAGGCACTGGCAATGGAGGATGCCGGCGTGCAACGAGTAGAAGAAGGCTAGGCAGTGGTGCGTGCCCGCGTAGTTTGTAGCGAGGAGGGGGATAATAAGAAGAAGGGGAATGGGAGCGGGAAAAATAAACCGGCACAGATAGCTGTGTGGTGGCGGTGGCAACGTTAGAGAGAAAGAAAACAAGGGTGGGAAGAAAGAAGGGAATGGTTCTCGGAAATATTTTAGAAAAATAACACTTTTTTAAGTTACATTTCAAACTTGACATGCTTTCATAAAAAATTCCTAAAATTTTTTTGTCAATCAATTTCTTACCAACGATATCGAGATTCTTCACAAATTTTTTAAAAC Coding sequence (CDS) ATGAACGACAGAGAGAGAGAGGGATTGCGGAAGAAAGAGTGTGCACTAAGGCGACGAGCAGTGCGGTGGGCAATTGGCGACGAGTTGAAGAAGGCTAGGCAGTCGTGGGTGCTGGCGAGGTTGAGCAGAGAGGGAGAGAGAAGAAACAGGCACTGGCAATGGAGGATGCCGGCGTGCAACGAGTAG Protein sequence MNDREREGLRKKECALRRRAVRWAIGDELKKARQSWVLARLSREGERRNRHWQWRMPACNE*
Homology
BLAST of CSPI07G14050 vs. ExPASy TrEMBL
Match: A0A0A0K6P9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336820 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 4.4e-26 Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0
Query: 1 MNDREREGLRKKECALRRRAVRWAIGDELKKARQSWVLARLSREGERRNRHWQWRMPACN 60
MNDREREGLRKKECALRRRAVRWAIGDELKKARQSWV ARLSREGERRNRHWQWRMPACN
Sbjct: 1 MNDREREGLRKKECALRRRAVRWAIGDELKKARQSWVPARLSREGERRNRHWQWRMPACN 60
Query: 61 E 62
E
Sbjct: 61 E 61
BLAST of CSPI07G14050 vs. ExPASy TrEMBL
Match: A0A5A7TLF2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00310 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.4e-08 Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = 0
Query: 1 MNDREREGLRKKECALRRRAVRWAIGDELKKARQSWV 38
MNDR+REGLRKKECA RRRAVRWAIG++LKKARQSW+
Sbjct: 1 MNDRKREGLRKKECAPRRRAVRWAIGEKLKKARQSWL 37
BLAST of CSPI07G14050 vs. NCBI nr
Match: KGN44579.1 (hypothetical protein Csa_016110 [Cucumis sativus]) HSP 1 Score: 126.3 bits (316), Expect = 9.0e-26 Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0
Query: 1 MNDREREGLRKKECALRRRAVRWAIGDELKKARQSWVLARLSREGERRNRHWQWRMPACN 60
MNDREREGLRKKECALRRRAVRWAIGDELKKARQSWV ARLSREGERRNRHWQWRMPACN
Sbjct: 1 MNDREREGLRKKECALRRRAVRWAIGDELKKARQSWVPARLSREGERRNRHWQWRMPACN 60
Query: 61 E 62
E
Sbjct: 61 E 61
BLAST of CSPI07G14050 vs. NCBI nr
Match: KAA0042169.1 (hypothetical protein E6C27_scaffold67G006630 [Cucumis melo var. makuwa] >TYK26744.1 hypothetical protein E5676_scaffold124G00310 [Cucumis melo var. makuwa]) HSP 1 Score: 68.2 bits (165), Expect = 2.9e-08 Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = 0
Query: 1 MNDREREGLRKKECALRRRAVRWAIGDELKKARQSWV 38
MNDR+REGLRKKECA RRRAVRWAIG++LKKARQSW+
Sbjct: 1 MNDRKREGLRKKECAPRRRAVRWAIGEKLKKARQSWL 37
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K6P9 | 4.4e-26 | 98.36 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336820 PE=4 SV=1 | [more] |
| A0A5A7TLF2 | 1.4e-08 | 86.49 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN44579.1 | 9.0e-26 | 98.36 | hypothetical protein Csa_016110 [Cucumis sativus] | [more] |
| KAA0042169.1 | 2.9e-08 | 86.49 | hypothetical protein E6C27_scaffold67G006630 [Cucumis melo var. makuwa] >TYK2674... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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