CSPI07G14050 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G14050
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr7: 12557996 .. 12558489 (+)
RNA-Seq ExpressionCSPI07G14050
SyntenyCSPI07G14050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGACAGAGAGAGAGAGGGATTGCGGAAGAAAGAGTGTGCACTAAGGCGACGAGCAGTGCGGTGGGCAATTGGCGACGAGTTGAAGAAGGCTAGGCAGTCGTGGGTGCTGGCGAGGTTGAGCAGAGAGGGAGAGAGAAGAAACAGGCACTGGCAATGGAGGATGCCGGCGTGCAACGAGTAGAAGAAGGCTAGGCAGTGGTGCGTGCCCGCGTAGTTTGTAGCGAGGAGGGGGATAATAAGAAGAAGGGGAATGGGAGCGGGAAAAATAAACCGGCACAGATAGCTGTGTGGTGGCGGTGGCAACGTTAGAGAGAAAGAAAACAAGGGTGGGAAGAAAGAAGGGAATGGTTCTCGGAAATATTTTAGAAAAATAACACTTTTTTAAGTTACATTTCAAACTTGACATGCTTTCATAAAAAATTCCTAAAATTTTTTTGTCAATCAATTTCTTACCAACGATATCGAGATTCTTCACAAATTTTTTAAAAC

mRNA sequence

ATGAACGACAGAGAGAGAGAGGGATTGCGGAAGAAAGAGTGTGCACTAAGGCGACGAGCAGTGCGGTGGGCAATTGGCGACGAGTTGAAGAAGGCTAGGCAGTCGTGGGTGCTGGCGAGGTTGAGCAGAGAGGGAGAGAGAAGAAACAGGCACTGGCAATGGAGGATGCCGGCGTGCAACGAGTAGAAGAAGGCTAGGCAGTGGTGCGTGCCCGCGTAGTTTGTAGCGAGGAGGGGGATAATAAGAAGAAGGGGAATGGGAGCGGGAAAAATAAACCGGCACAGATAGCTGTGTGGTGGCGGTGGCAACGTTAGAGAGAAAGAAAACAAGGGTGGGAAGAAAGAAGGGAATGGTTCTCGGAAATATTTTAGAAAAATAACACTTTTTTAAGTTACATTTCAAACTTGACATGCTTTCATAAAAAATTCCTAAAATTTTTTTGTCAATCAATTTCTTACCAACGATATCGAGATTCTTCACAAATTTTTTAAAAC

Coding sequence (CDS)

ATGAACGACAGAGAGAGAGAGGGATTGCGGAAGAAAGAGTGTGCACTAAGGCGACGAGCAGTGCGGTGGGCAATTGGCGACGAGTTGAAGAAGGCTAGGCAGTCGTGGGTGCTGGCGAGGTTGAGCAGAGAGGGAGAGAGAAGAAACAGGCACTGGCAATGGAGGATGCCGGCGTGCAACGAGTAG

Protein sequence

MNDREREGLRKKECALRRRAVRWAIGDELKKARQSWVLARLSREGERRNRHWQWRMPACNE*
Homology
[Close]
BLAST of CSPI07G14050 vs. ExPASy TrEMBL
Match: A0A0A0K6P9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336820 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.4e-26
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 1  MNDREREGLRKKECALRRRAVRWAIGDELKKARQSWVLARLSREGERRNRHWQWRMPACN 60
          MNDREREGLRKKECALRRRAVRWAIGDELKKARQSWV ARLSREGERRNRHWQWRMPACN
Sbjct: 1  MNDREREGLRKKECALRRRAVRWAIGDELKKARQSWVPARLSREGERRNRHWQWRMPACN 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]
BLAST of CSPI07G14050 vs. ExPASy TrEMBL
Match: A0A5A7TLF2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00310 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-08
Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 1  MNDREREGLRKKECALRRRAVRWAIGDELKKARQSWV 38
          MNDR+REGLRKKECA RRRAVRWAIG++LKKARQSW+
Sbjct: 1  MNDRKREGLRKKECAPRRRAVRWAIGEKLKKARQSWL 37

[Close]
BLAST of CSPI07G14050 vs. NCBI nr
Match: KGN44579.1 (hypothetical protein Csa_016110 [Cucumis sativus])

HSP 1 Score: 126.3 bits (316), Expect = 9.0e-26
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 1  MNDREREGLRKKECALRRRAVRWAIGDELKKARQSWVLARLSREGERRNRHWQWRMPACN 60
          MNDREREGLRKKECALRRRAVRWAIGDELKKARQSWV ARLSREGERRNRHWQWRMPACN
Sbjct: 1  MNDREREGLRKKECALRRRAVRWAIGDELKKARQSWVPARLSREGERRNRHWQWRMPACN 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]
BLAST of CSPI07G14050 vs. NCBI nr
Match: KAA0042169.1 (hypothetical protein E6C27_scaffold67G006630 [Cucumis melo var. makuwa] >TYK26744.1 hypothetical protein E5676_scaffold124G00310 [Cucumis melo var. makuwa])

HSP 1 Score: 68.2 bits (165), Expect = 2.9e-08
Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 1  MNDREREGLRKKECALRRRAVRWAIGDELKKARQSWV 38
          MNDR+REGLRKKECA RRRAVRWAIG++LKKARQSW+
Sbjct: 1  MNDRKREGLRKKECAPRRRAVRWAIGEKLKKARQSWL 37

The following BLAST results are available for this feature:
BLAST of CSPI07G14050 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G14050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6P94.4e-2698.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336820 PE=4 SV=1[more]
A0A5A7TLF21.4e-0886.49Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of CSPI07G14050 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44579.19.0e-2698.36hypothetical protein Csa_016110 [Cucumis sativus][more]
KAA0042169.12.9e-0886.49hypothetical protein E6C27_scaffold67G006630 [Cucumis melo var. makuwa] >TYK2674... [more]
BLAST of CSPI07G14050 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G14050.1CSPI07G14050.1mRNA