CSPI07G12930 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G12930
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr7: 11373182 .. 11377558 (-)
RNA-Seq ExpressionCSPI07G12930
SyntenyCSPI07G12930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTGTTCGAAGGACGCAGGTCAGCGGTTGGAAGCGTCAAGGGAACGACATGAAGGGATTCCATTTTGAAGGGATGTGTATCAGAATGAAGCATCAGACGACAAGATTCCGTTTTTGTTTTTGCAGGACAACATGGAGGGATCTTGTTTTTGTCAAGAAGGGATGCGTATCTTAATGAAGCATCACACAACAGTCGGGGCAGGCAGAAGAGTTAGGGATGACGGTCATACAGAACGGAGGACAGCGGTGAGAATCTCCTTTTTGCTTTCGAAGGGCGGTGTGAAGGATTTGGTTTTCATGAAGAAGGGATGAGTGTGAAGCGTCTACGGCTACCATCTGGCATTTTCGAAGCGATACCATCTGCACTTGAAGTTTAATTGTTTAATATTACTCGATGCTTTCACGAAAAGTATCTCACTTGAAGTTTAAAAGACATCAATAAATTTAAAAAATGACCTTTCCTACCACATTTCATAAAAATTCTTGATGTTTTAAAATATAAAAAATTTAATAGTTCTTACTAGATATTCTTAAAACGTCAAAGAAAAGTACATATCACTTAATGTTTAAAAGCTGTCAAGAAAGTCAAATTTATAATTATTCTTGATGTTTTAAAAACCTCATGAATTTAATAGATATTACTTTACATTTTTAAAACATAAAAAAAAGATGCATATTACTTGACGTTTAAAAACCATCAAGAAAGCTAAAAAAGGTCTACCTCCTTATTTTCATAAAAATTCTTGACGTTTTATCTTTGATATCACCCATTTTTTGACGTCTTTTTCGAAAAACATCAAATAATTAAAACCACAAACGTCAAGAAAGTTCCTTTTTCTAGTAGTGACATCATCCTTGTGTACGAAAGTTGGTGATTGATTTAACTTTGTCTCCAATCAAAATTCAGGATAAGGAAGTAACAGTGGCACATGGCGTTCTGACATTAGACCATTCTCACCACCGATCGAGCAAAATAATCATTATGGCATAGGAGACTACATCAAAGAGACTTATAAACATGTGAAGGTCTGTAATTTTGAAGCTGCTTTTACCTTAAGCTTACTTAAGAAAGAATTGAGAGAGTTACTACTTCTCGATGAAGGAAGCTCATATCCCATAGCAATTCATCGCATAGCTTAGAATATAAAATGCAAGCTACTTTGAAATTTCTTCAGTCGTATAACGGTCTCATCGTATAGGCCAATCTTGCCTCGTGAATCTTATCGCTTAAGGCAAAACATGATTAGGGCCTCAAATTAATCTCAAAGAAGCAAAAGGTTAGATAGGCTTATGATTTATGGTCTATAACAAAAACCTTTGTTCTATTGTTCTAGGGAAAACCATATTAAGTTTCTTATTAGGTTTTTCTTATTAGAAATTTATCTAGCGCAATTTTTTAAAGGGTAATGTGGTTAGTTAAATTGATTAGGATGTTATTTTTTATCTAATTAAATTGGCTAATTTGACATTTAGGATTATTCGTCACCGTGACATTTAGGACCACGATGGTGGGTTCGACAACGACTAGGCACAAGATGAACACGAAGGATCTTCTTCTAGTGGTGGTGGTAGTTGTTCAGAGAAGAAAGGAAAGAAAATGAGATAGAGATGGAGAATGTAGGAAAGAAATTGACAAACAGAGGAGAAAAATCGTGTGGCTTGAGAAAATAGTAAAATAAGAGAGATAAATACTTAACTTTGTACAAAAAAAACAATTAAACATAGCTTTAATATCGCTTTTCAAAAGGAGGATGTTTAATGTCAGTTTTAAACTGACATTAAAGCTCCCTCTTTAATATCGATTTAAAACCGACATAAACATCCGTCATTTGAGAAGCGACATTAAAGCTCCGTTTTCATTTTCCAACCCAACAATAAAAGCCAGATTTCTTCTAGTGAATCAATTGGGCTAGACACAAGTAAGAAGTTATAAATCATAGTTTGATAATTTGATGATCATAATTACAATGGACAAATTTCATTCTTCCAAGCTAGAACGTTATTATTTGATTGCTTTTCTATAATTTACTTAAGCGTCTTTACTTTTATGCACATATGAATCTCAAACCACAAACCCCATCTTTTATCACTTAATTAAATAATTAGCTTTGAGAAACTAATATTTCGTGCTTCTCTATGGATCGATCCAATCTTGCCACTTGTACTACTTAGTATTAAAGGTAATATTGATTGGTATCACTACAAGAAAAACTGTCTACTATGACAGTTGTGTATACCACAAAATGGGGGGAGAAAAAAAAACTGACACAAAATGTAAAATTTCGCGTTTTGGGCGAAAAAAACGGAACTTTTCGGATAAAACATTTTACGACAGTTATTTGATGTCATAGAAAAAAACATAAAATATTTTTTTATTTTTTATTAAAAATAGTAAATAAAGATTAGAAATTTAGAAAATATTTCCCCAAATCGTAAACCCTTATTATTTTTCCCAATTCTCCCACAAAGTATCCATCTCCAATCTGACCGTCTTTCATCTCCAATCTGACCGTCTTCCGACCCTGTCACCATCTGCCACTACTCGTGGCCATCTGTTCACTCCGACATGGCCGTCTATTCACTCTGACGTGCTCATCTGTTCACTCTAGCGCTGCCATTAACGAACGACGAAACCCCTGCAATCCTCTGCAATCTTCAAACCTTTTCAATTCGTTCTCGTCTTCTCCAGTGTTGTCGTTCGTGCCCGTCGTCTCCGGCGCTGCCATTTGTGCCCGTCGTCACCTCCTCTACCGGTAAGCTTCTATTCTTTCTCTCTTTGTCTCTCTCTCTTTGTGACGGTTTGATTCTGTGTTGATAGTGTACATTGAAATTTAATTTTATTTATCGAAAGTCCCCTTGACTGACTCCAATTTCCAATATGGTTGACCCAATCTTATTTCTATTTCAAATCTTGATCTACCCTTTATCCCCAGACCCCAGCTTTTGTTCAATTTCAAATCCATACACACACACACCCAAGTTTCATTTGTTCATGGATGGAGGATGTATTAAATATTATTACAATAACCAACATATCTAGTAGTAGTACTAGTGCTATGTGGAGTTAACATTCAAATCATTGGAAGTTATTAGAAACTAATTATGCCAAGTTTATATATTATTGTAGGATAGATTTGATTTTGAATATAATGAAATGGAATGAGTTGTTGCAATATATTATGGGAGCTTTGCAGATAAAACAACATACTGGATTTTTATAGGAAATACTGCACACCTACAGTTGGATATTCATTACTTATTTTTAGAAAATGGGTATTGTTTAATTGAAAGAACATTTTAAATCCAATAGAATAGAAGAAGTTTAAGATATCAAATCTTGGTTTGGTTTAAGTATGAATAAGAAAGAGAGAGTATTATTTAATTGAAAATGGAAACTAGAATGAGAGAGATTTTAGGGAAAAGTTGTTTTGTTCTAGACACACAAATATGTATGGAAACTCCTAAGTCCTAACATATATGTATACATATATACAGTAAATTCCCAACTTAAAAGTGGGATGTTTAAGCATATAAATGAAGAGAATACTTTTAAAGCTTCAAGCTTCACTAAATTCTCAACTTAAAGGTTTTGTGATATTAAGGATTTGATTGTAAAAAATCCACTGTTATCCAAATTCCAGCTCTAAATGTCCTCCCTTAGTGTGAGGAAGAATGAGAATAGGGATAAGTTGATGGATGGAGACCTATTCAGAAATTTCATCTTCAAGGTTGCTTCTAAAGTTCAGCACCCAAGACGTGTCAATCAAATATTTTTGGAATTTTAGATGGAAGTTATATGCTTGTTTTATCTCGACCTTATGGCATTTACATATCCTAATAATTGAAATCTCTTGTTTCCCACAATAAATAGTTGTGATTTATATTATTTTTGTTTTGTTTTCTTGCTAGCTAAACTGATTCATACTCTTTATAATGAAGATCTCATTTGATGGCACCTTGTTCATTCTCTGTTTGCCTACTTTTGGCTCTTCTGTTTTTTTTTCTTCTTCTTTTATTGAACATTATACTCTAGACTTACCATTTTATGCATTGAAAACATGAGTCTAGGATTCCTTTTCATAGGTGAAGTTCGAACTTGCTGCTTATGAGAAGTTAGTATTTGGAAAATTAGAGGTTTGTTCCTCATTTATCATTGTGATGTAAAATTGATTTTACCTTCCTTCGTTTTTTTCTTTTCTTTTTTTTACTTGAATATTTAACTGTTTTGAATTTTTTCTGCAGATGGTATTCTTGTTGTTACATCACATCCACTTATCAGTCCTATTTTGTTCAATCCGGCTGTGGCCGTAATCTCCAATCTGTCGCATTCTCTTGAACATTCAATTTGCATCTGTGACCTCCTCTACTGGTAA

mRNA sequence

ATGGGTTTGTTCGAAGGACGCAGGTCAGCGGACAACATGGAGGGATCTTGTTTTTGTCAAGAAGGGATGCGTATCTTAATGAAGCATCACACAACAGTCGGGGCAGGCAGAAGAGTTAGGGATGACGGTCATACAGAACGGAGGACAGCGGTGAGAATCTCCTTTTTGCTTTCGAAGGGCGGATTATTCGTCACCGTGACATTTAGGACCACGATGGTGGGTTCGACAACGACTAGGCACAAGATGAACACGAAGGATCTTCTTCTAGTGGTGGTGTGTTGTCGTTCGTGCCCGTCGTCTCCGGCGCTGCCATTTGTGCCCGTCGTCACCTCCTCTACCGATGGTATTCTTGTTGTTACATCACATCCACTTATCAGTCCTATTTTGTTCAATCCGGCTGTGGCCGTAATCTCCAATCTGTCGCATTCTCTTGAACATTCAATTTGCATCTGTGACCTCCTCTACTGGTAA

Coding sequence (CDS)

ATGGGTTTGTTCGAAGGACGCAGGTCAGCGGACAACATGGAGGGATCTTGTTTTTGTCAAGAAGGGATGCGTATCTTAATGAAGCATCACACAACAGTCGGGGCAGGCAGAAGAGTTAGGGATGACGGTCATACAGAACGGAGGACAGCGGTGAGAATCTCCTTTTTGCTTTCGAAGGGCGGATTATTCGTCACCGTGACATTTAGGACCACGATGGTGGGTTCGACAACGACTAGGCACAAGATGAACACGAAGGATCTTCTTCTAGTGGTGGTGTGTTGTCGTTCGTGCCCGTCGTCTCCGGCGCTGCCATTTGTGCCCGTCGTCACCTCCTCTACCGATGGTATTCTTGTTGTTACATCACATCCACTTATCAGTCCTATTTTGTTCAATCCGGCTGTGGCCGTAATCTCCAATCTGTCGCATTCTCTTGAACATTCAATTTGCATCTGTGACCTCCTCTACTGGTAA

Protein sequence

MGLFEGRRSADNMEGSCFCQEGMRILMKHHTTVGAGRRVRDDGHTERRTAVRISFLLSKGGLFVTVTFRTTMVGSTTTRHKMNTKDLLLVVVCCRSCPSSPALPFVPVVTSSTDGILVVTSHPLISPILFNPAVAVISNLSHSLEHSICICDLLYW*
Homology
[Close]
BLAST of CSPI07G12930 vs. NCBI nr
Match: KAE8650532.1 (hypothetical protein Csa_011082, partial [Cucumis sativus])

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-09
Identity = 37/42 (88.10%), Postives = 38/42 (90.48%), Query Frame = 0 

Query: 114 DGILVVTSHPLISPILFNPAVAVISNLSHSLEHSICICDLLY 156
           DGILVV SH LISPI FNP VAVISNLSHSLE+SICICDLLY
Sbjct: 18  DGILVVASHLLISPIQFNPVVAVISNLSHSLEYSICICDLLY 59

The following BLAST results are available for this feature:
BLAST of CSPI07G12930 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G12930 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G12930 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650532.11.3e-0988.10hypothetical protein Csa_011082, partial [Cucumis sativus][more]
BLAST of CSPI07G12930 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G12930.1CSPI07G12930.1mRNA