CSPI07G12730 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGGAATTAAAACTACAGTTGAAAAAGAAATATTGGAGCACATTAGTATTATGGAGACACCAAAGAAAGCATGGGACACATTTGCCTCACTTTTCTCAAAGAAGAATGATGCAAGATTGCAGGTTTTAGAAAACGAGCTCCTGTTAATCGCTCAAAGGGAGATGACTATCAACCATTTCACTAAGGTAAGAACTCTATGCCATGAAATCTCTAAATTAGATCCTACTTAAGCTATTTCAGAATTGAGAATGAGAAGAAATATTATTCATGGTCTTAAACCAGAATATATAAGTTTTATTGATGCTATTGAGGTTGGGCAATCCGACCTTCTTTGATTGACCCAGAAAATATGTTTGTCAGTCAAGAAGCATTGGATAAGCAAATGTCAGAGGTCACAATAAAGAGCAATGAGCAACAATGAAGAAGCGCTCTTTAGTTGCTAAAGAAAAGGTCATTCAAAATTTTAAAAGAAAGTAGGTTGAAAGGGAGATGAAGAGACTCCAAAATGCCCTCAAGTAAGGGGAGCTAACAAAAATGATCGTGAACACGGCCATAGAAAGAAGGGCAAATGCTACAATTATGGAAGGATAGGTCACTATACCAGAGAATGTCGCCAAAAAAAGATGACAGCAGAAAGCAACACAGTCACCTCCTAGGTTGAGAGCATTAGTGGTGAAGAATGGGATGCAGATCCATACTATGCAACAACAGATCCCGACCCCCAATCGGTATCCAATGTGATGGAGAATAAAGTGTTGGCTCTCCATGTAGACGAGGTAAATTATGAAAATGATTGGATTGATGATTCAGAATGTTGTAATCATATGACAAGAGATAAGCAGAAGCTATAAAACACAACAAAGTACAAAGGAAGCCAAGTTGTTGTAACTGCAAACAACTCGAAGTTGCCAATACCCACATTGGCAAAACTCTCATAATGCCTCATTCGAATTCCAATCAAGTAGAACTGGAAAGCATGCGTTATGTGCCTTAATGCAGAAAAATTTGTGCCAATATCTCAATTGACATCAGCAGGCAAATTTTTCGTGTTTGGACCAAATGGTGTTAAGGTTTACCAAGATTTGGAAGCCAGTGGCAAGCTATTGATGGAAAGACAAGAAATGGATTCCATCTATATCATGTTAGCAGAAGACGCCTACATGGATAGGCAAAGGCATTTAGTGACAGAGTGCATTGATTCCATTGATGAACAATGTCATACAATTAATGAAGCATTATCATGAGAGGTCTTTTGAGGAAGGATCCAAAGATGAGATAAGTCGAGTATAACATGATCCAACAGAAGGTGAAGAAGAAAACGACAAAGACGAAAAACAAT ATGTTTGGAATTAAAACTACAGTTGAAAAAGAAATATTGGAGCACATTAGTATTATGGAGACACCAAAGAAAGCATGGGACACATTTGCCTCACTTTTCTCAAAGAAGAATGATGCAAGATTGCAGGTTTTAGAAAACGAGCTCCTGTTAATCGCTCAAAGGGAGATGACTATCAACCATTTCACTAAGGTTGAGAGCATTAGTGGTGAAGAATGGGATGCAGATCCATACTATGCAACAACAGATCCCGACCCCCAATCGGTATCCAATGTGATGGAGAATAAAGTGTTGGCTCTCCATGTAGACGAGAACTGGAAAGCATGCGTTATGTGCCTTAATGCAGAAAAATTTGTGCCAATATCTCAATTGACATCAGCAGGCAAATTTTTCGTGTTTGGACCAAATGGTGTTAAGGTTTACCAAGATTTGGAAGCCAGTGGCAAGCTATTGATGGAAAGACAAGAAATGGATTCCATCTATATCATGTTAGCAGAAGACGCCTACATGGATAGGCAAAGGCATTTAGTGACAGAGTGCATTGATTCCATTGATGAACAATGTCATACAATTAATGAAGCATTATCATGAGAGGTCTTTTGAGGAAGGATCCAAAGATGAGATAAGTCGAGTATAACATGATCCAACAGAAGGTGAAGAAGAAAACGACAAAGACGAAAAACAAT ATGTTTGGAATTAAAACTACAGTTGAAAAAGAAATATTGGAGCACATTAGTATTATGGAGACACCAAAGAAAGCATGGGACACATTTGCCTCACTTTTCTCAAAGAAGAATGATGCAAGATTGCAGGTTTTAGAAAACGAGCTCCTGTTAATCGCTCAAAGGGAGATGACTATCAACCATTTCACTAAGGTTGAGAGCATTAGTGGTGAAGAATGGGATGCAGATCCATACTATGCAACAACAGATCCCGACCCCCAATCGGTATCCAATGTGATGGAGAATAAAGTGTTGGCTCTCCATGTAGACGAGAACTGGAAAGCATGCGTTATGTGCCTTAATGCAGAAAAATTTGTGCCAATATCTCAATTGACATCAGCAGGCAAATTTTTCGTGTTTGGACCAAATGGTGTTAAGGTTTACCAAGATTTGGAAGCCAGTGGCAAGCTATTGATGGAAAGACAAGAAATGGATTCCATCTATATCATGTTAGCAGAAGACGCCTACATGGATAGGCAAAGGCATTTAGTGACAGAGTGCATTGATTCCATTGATGAACAATGTCATACAATTAATGAAGCATTATCATGA MFGIKTTVEKEILEHISIMETPKKAWDTFASLFSKKNDARLQVLENELLLIAQREMTINHFTKVESISGEEWDADPYYATTDPDPQSVSNVMENKVLALHVDENWKACVMCLNAEKFVPISQLTSAGKFFVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDRQRHLVTECIDSIDEQCHTINEALS* Homology
BLAST of CSPI07G12730 vs. ExPASy TrEMBL
Match: A0A0A0K4U2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G305380 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 2.4e-38 Identity = 83/86 (96.51%), Postives = 83/86 (96.51%), Query Frame = 0
BLAST of CSPI07G12730 vs. ExPASy TrEMBL
Match: A0A5A7TNQ2 (UBN2_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00830 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 6.6e-36 Identity = 97/175 (55.43%), Postives = 109/175 (62.29%), Query Frame = 0
BLAST of CSPI07G12730 vs. ExPASy TrEMBL
Match: A0A5A7T6Z1 (Glutamate receptor 2.8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001370 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 2.6e-32 Identity = 100/240 (41.67%), Postives = 127/240 (52.92%), Query Frame = 0
BLAST of CSPI07G12730 vs. ExPASy TrEMBL
Match: A0A2N9FTF3 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18390 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 2.1e-29 Identity = 88/209 (42.11%), Postives = 121/209 (57.89%), Query Frame = 0
BLAST of CSPI07G12730 vs. ExPASy TrEMBL
Match: A0A5A7V002 (Zinc finger, CCHC-type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001020 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 3.3e-27 Identity = 77/154 (50.00%), Postives = 91/154 (59.09%), Query Frame = 0
BLAST of CSPI07G12730 vs. NCBI nr
Match: KAA0045163.1 (UBN2_3 domain-containing protein [Cucumis melo var. makuwa] >TYK23575.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 160.6 bits (405), Expect = 1.4e-35 Identity = 97/175 (55.43%), Postives = 109/175 (62.29%), Query Frame = 0
BLAST of CSPI07G12730 vs. NCBI nr
Match: KAA0037956.1 (glutamate receptor 2.8-like [Cucumis melo var. makuwa]) HSP 1 Score: 148.7 bits (374), Expect = 5.4e-32 Identity = 100/240 (41.67%), Postives = 127/240 (52.92%), Query Frame = 0
BLAST of CSPI07G12730 vs. NCBI nr
Match: KAA0059175.1 (Zinc finger, CCHC-type [Cucumis melo var. makuwa]) HSP 1 Score: 131.7 bits (330), Expect = 6.8e-27 Identity = 77/154 (50.00%), Postives = 91/154 (59.09%), Query Frame = 0
BLAST of CSPI07G12730 vs. NCBI nr
Match: KAA0037350.1 (Integrase, catalytic core [Cucumis melo var. makuwa] >TYJ97557.1 Integrase, catalytic core [Cucumis melo var. makuwa]) HSP 1 Score: 128.6 bits (322), Expect = 5.7e-26 Identity = 109/345 (31.59%), Postives = 134/345 (38.84%), Query Frame = 0
BLAST of CSPI07G12730 vs. NCBI nr
Match: KAG6498151.1 (hypothetical protein ZIOFF_046060 [Zingiber officinale]) HSP 1 Score: 119.8 bits (299), Expect = 2.7e-23 Identity = 85/245 (34.69%), Postives = 117/245 (47.76%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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