CSPI07G10370 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G10370
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr7: 8485092 .. 8486192 (+)
RNA-Seq ExpressionCSPI07G10370
SyntenyCSPI07G10370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGAAAGTTAACTTTGTTTTTTTTGAGAAGAATGGAAGAATTTGCTTGACATATATAAAATTGATGCTTAGTCCTCAAGTAAATTCACGGTGGTAAAGAAAAGGAAGATGGAATTGGCTCCATCTTCTCCATTCCAAGTGGCGATTATTTGGCCCAAGAGAAAGGTTTAGAAGTTTGCCAAACCACCACCACTGTTGTAAACCCTCTAGATAACTACCATAATTGCTTCCAAGAAGACTTCCGAACTGAAGGGAACAGAAATGATAAAGGAGACAACAAATCAAAACAAATTATTTTGATCTCTCTCATAGTAAATGACACAGAAACAGTATTATAATTAGGAGATACCCTTAAGCAGGTTTTCTGAGGAGGTATCAGAAGAGGATTTCTTTGAATAGAAGATCAATCAAGTCTATATAGAGCTCGGGAAGAATTGGTTGGGTAGCTCTTGATACTGATCTTAGGTGCTTATTTTGTGCAAAGAAGACATTATGGCTATCTCTGATTTTATCATGGGCATGTTCTTTATATCTATACAGTTCTTTTGACAGTTGGTTAATATGGGTTTATGGGCTAGACACTCCCAGTTGAATGGATGAGTTCTGTGCATGAAATAAGGGATCTGCTTATGGCTTGCCTCTATTTTTCTCCATAAAAATTAGTGGTGACTTCATTATAGTTTGCTGGATTCTTGAAAACTTAAACGGGGCAGGATACCTAGAAGTATGAGGGCTTTTAACAATCGAGTGGAAGAGTTGGAGTTGATTGCTATTCCCCTAAAAATCATAGATTTACTTCTGACGGTAGAGAGAGGCCTACTTCCACCAGGATGGTTAAGTTCTTCTTCAGTACAAGACCTTTTGGCAATACTTGAGAAACCTTGCGAGGGTCCTAGGATGACAATGGGGTCCTTCACCTTTTCATTTAAAAACATGTGGCTTGACCATCCGAACTTTTTTTTTTTACGATTGATAATTGGTGGATTCCCACAATTACAGTGGGTGGCCTGGGTATAGAGATTCATTGATACTTGAGGTTGCTAGCTTTTTGAAAACCTGGAACAAAGAAATCTTTGGCATAACTGATGATGAAAAGAAATAA

mRNA sequence

GGGAAAGTTAACTTTGTTTTTTTTGAGAAGAATGGAAGAATTTGCTTGACATATATAAAATTGATGCTTAGTCCTCAAGTAAATTCACGGTGGTAAAGAAAAGGAAGATGGAATTGGCTCCATCTTCTCCATTCCAAGTGGCGATTATTTGGCCCAAGAGAAAGGTTTAGAAGTTTGCCAAACCACCACCACTGTTGTAAACCCTCTAGATAACTACCATAATTGCTTCCAAGAAGACTTCCGAACTGAAGGGAACAGAAATGATAAAGGAGACAACAAATCAAAACAAATTATTTTGATCTCTCTCATAGTAAATGACACAGAAACAGTATTATAATTAGGAGATACCCTTAAGCAGGTTTTCTGAGGAGGTATCAGAAGAGGATTTCTTTGAATAGAAGATCAATCAAGTCTATATAGAGCTCGGGAAGAATTGGTTGGGTAGCTCTTGATACTGATCTTAGGTGCTTATTTTGTGCAAAGAAGACATTATGGCTATCTCTGATTTTATCATGGGCATGTTCTTTATATCTATACAGTTCTTTTGACAGTTGGTTAATATGGGTTTATGGGCTAGACACTCCCAGTTGAATGGATGAGTTCTGTGCATGAAATAAGGGATCTGCTTATGGCTTGCCTCTATTTTTCTCCATAAAAATTAGTGGTGACTTCATTATAGTTTGCTGGATTCTTGAAAACTTAAACGGGGCAGGATACCTAGAAGTATGAGGGCTTTTAACAATCGAGTGGAAGAGTTGGAGTTGATTGCTATTCCCCTAAAAATCATAGATTTACTTCTGACGGTAGAGAGAGGCCTACTTCCACCAGGATGGTTAAGTTCTTCTTCAGTACAAGACCTTTTGGCAATACTTGAGAAACCTTGCGAGGGTCCTAGGATGACAATGGGTGGGTGGCCTGGGTATAGAGATTCATTGATACTTGAGGTTGCTAGCTTTTTGAAAACCTGGAACAAAGAAATCTTTGGCATAACTGATGATGAAAAGAAATAA

Coding sequence (CDS)

ATGAGGGCTTTTAACAATCGAGTGGAAGAGTTGGAGTTGATTGCTATTCCCCTAAAAATCATAGATTTACTTCTGACGGTAGAGAGAGGCCTACTTCCACCAGGATGGTTAAGTTCTTCTTCAGTACAAGACCTTTTGGCAATACTTGAGAAACCTTGCGAGGGTCCTAGGATGACAATGGGTGGGTGGCCTGGGTATAGAGATTCATTGATACTTGAGGTTGCTAGCTTTTTGAAAACCTGGAACAAAGAAATCTTTGGCATAACTGATGATGAAAAGAAATAA

Protein sequence

MRAFNNRVEELELIAIPLKIIDLLLTVERGLLPPGWLSSSSVQDLLAILEKPCEGPRMTMGGWPGYRDSLILEVASFLKTWNKEIFGITDDEKK*
Homology
[Close]
BLAST of CSPI07G10370 vs. ExPASy TrEMBL
Match: A0A0A0K5J4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G232480 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.7e-45
Identity = 92/94 (97.87%), Postives = 92/94 (97.87%), Query Frame = 0 

Query: 1  MRAFNNRVEELELIAIPLKIIDLLLTVERGLLPPGWLSSSSVQDLLAILEKPCEGPRMTM 60
          MRAFNN VEELELIAIPLKIIDLLLTVERGLLPPGWLSSSSVQDLLAILEKPCEGPRMTM
Sbjct: 1  MRAFNNPVEELELIAIPLKIIDLLLTVERGLLPPGWLSSSSVQDLLAILEKPCEGPRMTM 60

Query: 61 GGWPGYRDSLILEVASFLKTWNKEIFGITDDEKK 95
          GGWPGYRDSLILEVASFLKTWNKE FGITDDEKK
Sbjct: 61 GGWPGYRDSLILEVASFLKTWNKETFGITDDEKK 94

[Close]
BLAST of CSPI07G10370 vs. NCBI nr
Match: KGN44224.1 (hypothetical protein Csa_016400 [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 3.5e-45
Identity = 92/94 (97.87%), Postives = 92/94 (97.87%), Query Frame = 0 

Query: 1  MRAFNNRVEELELIAIPLKIIDLLLTVERGLLPPGWLSSSSVQDLLAILEKPCEGPRMTM 60
          MRAFNN VEELELIAIPLKIIDLLLTVERGLLPPGWLSSSSVQDLLAILEKPCEGPRMTM
Sbjct: 1  MRAFNNPVEELELIAIPLKIIDLLLTVERGLLPPGWLSSSSVQDLLAILEKPCEGPRMTM 60

Query: 61 GGWPGYRDSLILEVASFLKTWNKEIFGITDDEKK 95
          GGWPGYRDSLILEVASFLKTWNKE FGITDDEKK
Sbjct: 61 GGWPGYRDSLILEVASFLKTWNKETFGITDDEKK 94

The following BLAST results are available for this feature:
BLAST of CSPI07G10370 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G10370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5J41.7e-4597.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G232480 PE=4 SV=1[more]
BLAST of CSPI07G10370 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44224.13.5e-4597.87hypothetical protein Csa_016400 [Cucumis sativus][more]
BLAST of CSPI07G10370 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G10370.1CSPI07G10370.1mRNA