CSPI07G09860 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G09860
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Geranylgeranyl pyrophosphate synthase, chloroplastic
Location	Chr7: 7854682 .. 7855872 (+)
RNA-Seq Expression	CSPI07G09860
Synteny	CSPI07G09860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTAAAACAACTCAAAATTATAAACCATTACCAAATCTGCTGACCGCTGACCGCTGACCGAAGTTATGAAACAAACATAAATGTCTCCAAAATTCTATTAGCACTTTGCATCTCTAATGGCGATCTCTCTCAATCTTCTTCAACTCCAACCAAATCTAGCACGCTCCAAGTTCTTCCAAACAAACTCCCTCCCACCGATGCCTTATGTCAGACTTCCCCCGAGGTCCGCCGCCGTCATGTCGCAGATCACTCCCTCCTACTGGGCCGCCATAAACGAAGATATCGAGGATCATCTCCGGCGGGTCATTCCGGTCAAGGACCCAGCGGCGGTGTATGAACCCTTGGGACATTTCATCTTCTCTGCCCCACGAAACTCCGCTCCTGCACTTTGTATCGCCGCCTGCGAGCTCGTCGGCGGTCACCGTGATCAGGCGATGGCGGCGGCTACTGCGATCCAACTCATCTACGCTGCAACGTGCACTCATGAATACCCTCCACTGACGGCGCGTGGGAAACGCGCCGCCGTTGTTGACCGTGTGTACGGATCCAACGTCCAGTTGATGACTGGCGACGGAATAACTCCGATGGGGTTCGAGATTTTGGCGGAATCTTGCGACTGGAGCGAGAGGGGGTCGGAGCGGGTTCGACGAGTGATGGTGGAAGTGGCACGAGCGATGGGGACGGAGGGGTGGATTGGGGGGCAATTCAGGGGACTGGAGGAGGAGGCAACGGTGGAGGAAGTGATAGAGAAGACGGAAGGTGGGTTACACGCGTGTGGGGGCGCGTGTGGAGCTATAATGGGAGGTGGAAATGAAGAGGAAATAGAAAAGATGAGGAAATATGGGAAATTGGTGGGGATTGTTAAAGGATTAACACAAATTGTGTTTGGAGGGAAGGAAAATGAGAGAAAGAGAGAGAAAATTGAAGAGTTGAAGGTTTTGGCTTTCAAGGAATTGGAAGGATTCAATGGAGAAATGGTTCCTCAAATTTACGGCTTCCTTGATTTTGTGCGACTTTAGAACAAATAAATGAACAGATCAATAAGAAGCAAAAAGGAAAACAAAAATTAAGGAAAAATAAACTAAAGGGTAATGTAGAGAAAGTTTTTTTTTTTTTCCTTCTAATTTCTTATTATTGTTTGTGATATTTTTAGCGTTTTATCTCTAATAAAATATTGTTAGGTTTTAATG

mRNA sequence

AATTAAAACAACTCAAAATTATAAACCATTACCAAATCTGCTGACCGCTGACCGCTGACCGAAGTTATGAAACAAACATAAATGTCTCCAAAATTCTATTAGCACTTTGCATCTCTAATGGCGATCTCTCTCAATCTTCTTCAACTCCAACCAAATCTAGCACGCTCCAAGTTCTTCCAAACAAACTCCCTCCCACCGATGCCTTATGTCAGACTTCCCCCGAGGTCCGCCGCCGTCATGTCGCAGATCACTCCCTCCTACTGGGCCGCCATAAACGAAGATATCGAGGATCATCTCCGGCGGGTCATTCCGGTCAAGGACCCAGCGGCGGTGTATGAACCCTTGGGACATTTCATCTTCTCTGCCCCACGAAACTCCGCTCCTGCACTTTGTATCGCCGCCTGCGAGCTCGTCGGCGGTCACCGTGATCAGGCGATGGCGGCGGCTACTGCGATCCAACTCATCTACGCTGCAACGTGCACTCATGAATACCCTCCACTGACGGCGCGTGGGAAACGCGCCGCCGTTGTTGACCGTGTGTACGGATCCAACGTCCAGTTGATGACTGGCGACGGAATAACTCCGATGGGGTTCGAGATTTTGGCGGAATCTTGCGACTGGAGCGAGAGGGGGTCGGAGCGGGTTCGACGAGTGATGGTGGAAGTGGCACGAGCGATGGGGACGGAGGGGTGGATTGGGGGGCAATTCAGGGGACTGGAGGAGGAGGCAACGGTGGAGGAAGTGATAGAGAAGACGGAAGGTGGGTTACACGCGTGTGGGGGCGCGTGTGGAGCTATAATGGGAGGTGGAAATGAAGAGGAAATAGAAAAGATGAGGAAATATGGGAAATTGGTGGGGATTGTTAAAGGATTAACACAAATTGTGTTTGGAGGGAAGGAAAATGAGAGAAAGAGAGAGAAAATTGAAGAGTTGAAGGTTTTGGCTTTCAAGGAATTGGAAGGATTCAATGGAGAAATGGTTCCTCAAATTTACGGCTTCCTTGATTTTGTGCGACTTTAGAACAAATAAATGAACAGATCAATAAGAAGCAAAAAGGAAAACAAAAATTAAGGAAAAATAAACTAAAGGGTAATGTAGAGAAAGTTTTTTTTTTTTTCCTTCTAATTTCTTATTATTGTTTGTGATATTTTTAGCGTTTTATCTCTAATAAAATATTGTTAGGTTTTAATG

Coding sequence (CDS)

ATGGCGATCTCTCTCAATCTTCTTCAACTCCAACCAAATCTAGCACGCTCCAAGTTCTTCCAAACAAACTCCCTCCCACCGATGCCTTATGTCAGACTTCCCCCGAGGTCCGCCGCCGTCATGTCGCAGATCACTCCCTCCTACTGGGCCGCCATAAACGAAGATATCGAGGATCATCTCCGGCGGGTCATTCCGGTCAAGGACCCAGCGGCGGTGTATGAACCCTTGGGACATTTCATCTTCTCTGCCCCACGAAACTCCGCTCCTGCACTTTGTATCGCCGCCTGCGAGCTCGTCGGCGGTCACCGTGATCAGGCGATGGCGGCGGCTACTGCGATCCAACTCATCTACGCTGCAACGTGCACTCATGAATACCCTCCACTGACGGCGCGTGGGAAACGCGCCGCCGTTGTTGACCGTGTGTACGGATCCAACGTCCAGTTGATGACTGGCGACGGAATAACTCCGATGGGGTTCGAGATTTTGGCGGAATCTTGCGACTGGAGCGAGAGGGGGTCGGAGCGGGTTCGACGAGTGATGGTGGAAGTGGCACGAGCGATGGGGACGGAGGGGTGGATTGGGGGGCAATTCAGGGGACTGGAGGAGGAGGCAACGGTGGAGGAAGTGATAGAGAAGACGGAAGGTGGGTTACACGCGTGTGGGGGCGCGTGTGGAGCTATAATGGGAGGTGGAAATGAAGAGGAAATAGAAAAGATGAGGAAATATGGGAAATTGGTGGGGATTGTTAAAGGATTAACACAAATTGTGTTTGGAGGGAAGGAAAATGAGAGAAAGAGAGAGAAAATTGAAGAGTTGAAGGTTTTGGCTTTCAAGGAATTGGAAGGATTCAATGGAGAAATGGTTCCTCAAATTTACGGCTTCCTTGATTTTGTGCGACTTTAG

Protein sequence

MAISLNLLQLQPNLARSKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHLRRVIPVKDPAAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAATCTHEYPPLTARGKRAAVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRVMVEVARAMGTEGWIGGQFRGLEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKMRKYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFVRL*

Homology

[Close]

BLAST of CSPI07G09860 vs. ExPASy Swiss-Prot
Match: Q39108 (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGR PE=1 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 1.5e-31
Identity = 93/307 (30.29%), Postives = 153/307 (49.84%), Query Frame = 0


Query: 24  SLPPMPY---VRLPPRSAAVMSQITP--------SYWAAINEDIEDHLRRVIPVKDPAAV 83
           SLP  P+   ++L P +    S   P        +YW  +  +I   L   IPVK PA +
Sbjct: 15  SLPEKPHTLPMKLSPAAIRSSSSSAPGSLNFDLRTYWTTLITEINQKLDEAIPVKHPAGI 74

Query: 84  YEPLGHFIFS-APRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAATCTHEYPPL--- 143
           YE + + + +   + + P +C+AACEL GG R  A   A A+++++AA+  H+  P    
Sbjct: 75  YEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDD 134

Query: 144 --TARGKRAAVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRVMVEVARA 203
               RGK +     VYGS + ++ GD + P+ F+ +             + R++ E+AR 
Sbjct: 135 DPVRRGKPSN--HTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRLITEIART 194

Query: 204 MGTEGWIGGQFRGLE-EEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKMRKYGKL 263
           +G+ G   GQ+  LE     +  V EK  G +  C   CG ++GG  E+E++ +R+YG+ 
Sbjct: 195 VGSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRA 254

Query: 264 VGIVKGLTQIVFGGKENERK----------REKIEELKVLAFKELEGFN-----GEMVPQ 298
           VG+   L Q+V    E+++K           E  EELK  A KEL+ F+     G+ +  
Sbjct: 255 VGM---LYQVVDDITEDKKKSYDGGAEKGMMEMAEELKEKAKKELQVFDNKYGGGDTLVP 314

[Close]

BLAST of CSPI07G09860 vs. ExPASy Swiss-Prot
Match: Q94ID7 (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=3981 GN=GGPS PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.1e-26
Identity = 84/289 (29.07%), Postives = 138/289 (47.75%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPVKDPAAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQA 106
           SY       I   L   IP+++PA ++E + + + +  +   PALC+AACELVGG+   A
Sbjct: 81  SYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMA 140

Query: 107 MAAATAIQLIYAATCTHEYPPL-----TARGKRAAVVDRVYGSNVQLMTGDGITPMGFEI 166
           M AA A+++I+  +  H+  P        RGK    +  V+G +V ++ GD +    FE 
Sbjct: 141 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHI--VFGEDVAVLAGDALLAFAFEH 200

Query: 167 LAESCDWSERGSERVRRVMVEVARAMGTEGWIGGQFRGLEEEATVEEVIEKTE------- 226
           +A S       S R+ R + E+A+A+G EG + GQ   +  E + E  +EK E       
Sbjct: 201 IAVST--LNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKT 260

Query: 227 GGLHACGGACGAIMGGGNEEEIEKMRKYGKLVGIVKGLTQIVF------------GGKE- 286
             L       GAI+GGG +EE+EK+RKY + +G++  +   +              GK+ 
Sbjct: 261 AKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDL 320

Query: 287 ------------NERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV 299
                        E+ RE  E+L   A ++L GF+ E    +    +++
Sbjct: 321 VADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFDPEKAAPLIALANYI 365

[Close]

BLAST of CSPI07G09860 vs. ExPASy Swiss-Prot
Match: P34802 (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGPPS1 PE=1 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 3.8e-24
Identity = 82/292 (28.08%), Postives = 137/292 (46.92%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPVKDPAAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQA 106
           SY     E +   L   +P+++P  ++E + + + +  +   P LCIAACELVGG    A
Sbjct: 78  SYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTA 137

Query: 107 MAAATAIQLIYAATCTHEYPPL-----TARGKRAAVVDRVYGSNVQLMTGDGITPMGFEI 166
           M AA A+++I+  +  H+  P        RGK      +V+G +V ++ GD +    FE 
Sbjct: 138 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGK--PTNHKVFGEDVAVLAGDALLSFAFEH 197

Query: 167 LAESCDWSERGSERVRRVMVEVARAMGTEGWIGGQFRGLEEEAT------VEEV----IE 226
           LA +         RV R + E+A+A+GTEG + GQ   +  E        +E +    + 
Sbjct: 198 LASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLH 257

Query: 227 KTEGGLHACGGACGAIMGGGNEEEIEKMRKYGKLVG----IVKGLTQIVFGGKE------ 286
           KT   L A     GAI+GGG+++EIE++RK+ + +G    +V  +  +    KE      
Sbjct: 258 KTAALLEA-SAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAG 317

Query: 287 ---------------NERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV 299
                           E+ RE  E+L   A  +L GF+ + V  +    +++
Sbjct: 318 KDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYI 366

[Close]

BLAST of CSPI07G09860 vs. ExPASy Swiss-Prot
Match: Q43133 (Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis alba OX=3728 GN=GGPS1 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.0e-24
Identity = 83/292 (28.42%), Postives = 138/292 (47.26%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPVKDPAAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQA 106
           SY     + +   L   +P+++P  ++E + + + +  +   P LCIAACELVGG    A
Sbjct: 74  SYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLA 133

Query: 107 MAAATAIQLIYAATCTHEYPPL-----TARGKRAAVVDRVYGSNVQLMTGDGITPMGFEI 166
           M A  A+++I+  +  H+  P        RGK      +VYG +V ++ GD +    FE 
Sbjct: 134 MPARCAVEMIHTMSLIHDDLPCMDNDDLRRGK--PTNHKVYGEDVAVLAGDALLSFAFEH 193

Query: 167 LAESCDWSERGSERVRRVMVEVARAMGTEGWIGGQFRGLEEEAT------VEEV----IE 226
           LA S   SE    RV R + E+A+A+GTEG + GQ   +  E        +E +    + 
Sbjct: 194 LA-SATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLH 253

Query: 227 KTEGGLHACGGACGAIMGGGNEEEIEKMRKYGKLVGIVKGLTQIVF------------GG 286
           KT   L A     G I+GGG++EEIE++RK+ + +G++  +   +              G
Sbjct: 254 KTAALLEA-SAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQELGKTAG 313

Query: 287 KE-------------NERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV 299
           K+              E+ RE  E+L   A  +L GF+ + V  +    +++
Sbjct: 314 KDLIADKLTYPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYI 361

[Close]

BLAST of CSPI07G09860 vs. ExPASy Swiss-Prot
Match: Q9LHR4 (Geranylgeranyl pyrophosphate synthase 12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g32040 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.6e-24
Identity = 84/294 (28.57%), Postives = 137/294 (46.60%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPVKDPAAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQA 106
           SY     E +   L   +P +DP A+ E + + + +  +   P LCIAACELVGG    A
Sbjct: 68  SYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATA 127

Query: 107 MAAATAIQLIYAATCTHEYPPL-----TARGKRAAVVDRVYGSNVQLMTGDGITPMGFEI 166
           M+AA A+++I+ ++  H+  P        RGK      +V+G ++ ++ GD +  + FE 
Sbjct: 128 MSAACAVEMIHTSSLIHDDLPCMDDADLRRGK--PTNHKVFGEHMAVLAGDALLALAFEH 187

Query: 167 LAESCDWSERGSERVRRVMVEVARAMGTEGWIGGQFR------------GLEEEATVEEV 226
           +           ER+ R + E+A+A+GT+G + GQ              GLE    +   
Sbjct: 188 MTVVSS-GLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIH-- 247

Query: 227 IEKTEGGLHACGGACGAIMGGGNEEEIEKMRKYGKLVGIVKGLTQIVFGGKEN------- 286
           + KT   L A     GAI+GGG EEEI+K+RKYG+ +G++  +   +    E+       
Sbjct: 248 LHKTAALLEA-AAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKT 307

Query: 287 ------------------ERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV 299
                             ER RE  E+L+  A ++L GF+   V  +     ++
Sbjct: 308 AGKDVMARKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSNKVAPLVALASYI 355

[Close]

BLAST of CSPI07G09860 vs. ExPASy TrEMBL
Match: A0A0A0K8P9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G211090 PE=4 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 3.2e-167
Identity = 297/300 (99.00%), Postives = 298/300 (99.33%), Query Frame = 0


Query: 1   MAISLNLLQLQPNLARSKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60
           MAISLNLLQLQPNLAR KFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPVKDPAAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120
           RRVIPVKDP AVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT
Sbjct: 61  RRVIPVKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120

Query: 121 CTHEYPPLTARGKRAAVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRVM 180
           CTHEYPPLTARGKRA+VVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRVM
Sbjct: 121 CTHEYPPLTARGKRASVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRVM 180

Query: 181 VEVARAMGTEGWIGGQFRGLEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKMR 240
           VEVARAMGTEGWIGGQFRGLEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKMR
Sbjct: 181 VEVARAMGTEGWIGGQFRGLEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKMR 240

Query: 241 KYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFVRL 300
           KYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFVRL
Sbjct: 241 KYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFVRL 300

[Close]

BLAST of CSPI07G09860 vs. ExPASy TrEMBL
Match: A0A5A7SLD5 (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold29549G00010 PE=4 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 5.6e-151
Identity = 270/300 (90.00%), Postives = 281/300 (93.67%), Query Frame = 0


Query: 1   MAISLNLLQLQPNLARSKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60
           MAISLNLLQLQPNLAR KFFQTN +PP PYVR PPRS   MSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNLVPPAPYVRPPPRSTVFMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPVKDPAAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120
           RRVIPVKDP AVYEPLGHFI SAPRNSA ALCIAACELVGGHRDQAMAAATAIQLI+AAT
Sbjct: 61  RRVIPVKDPLAVYEPLGHFILSAPRNSASALCIAACELVGGHRDQAMAAATAIQLIHAAT 120

Query: 121 CTHEYPPLTARGKRAAVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRVM 180
           CTHEYPPLTA G RAAVV+RVY  ++QLMTGDGI PMGFEILAESCDWSERGSERVRRVM
Sbjct: 121 CTHEYPPLTASGTRAAVVERVYRPSIQLMTGDGIAPMGFEILAESCDWSERGSERVRRVM 180

Query: 181 VEVARAMGTEGWIGGQFRGLEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKMR 240
           VEV+RAMGTEGWIGGQFRGL+EEATVEEVIEK EGGLHACGGACGAIMGGGNEEEIEKMR
Sbjct: 181 VEVSRAMGTEGWIGGQFRGLDEEATVEEVIEKREGGLHACGGACGAIMGGGNEEEIEKMR 240

Query: 241 KYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFVRL 300
           KYGKLVG+VKGLT+ VFGGKENE+KREKIEELKVLAFKELEGFNGEMV +IYGFLDFV L
Sbjct: 241 KYGKLVGMVKGLTKNVFGGKENEKKREKIEELKVLAFKELEGFNGEMVHEIYGFLDFVGL 300

[Close]

BLAST of CSPI07G09860 vs. ExPASy TrEMBL
Match: A0A1S4DWU7 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC107990910 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 2.2e-123
Identity = 222/246 (90.24%), Postives = 230/246 (93.50%), Query Frame = 0


Query: 1   MAISLNLLQLQPNLARSKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60
           MAISLNLLQLQPNLAR KFFQTN +PP PYVR PPRS   MSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNLVPPAPYVRPPPRSTVFMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPVKDPAAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120
           RRVIPVKDP AVYEPLGHFI SAPRNSA ALCIAACELVGGHRDQAMAAATAIQLI+AAT
Sbjct: 61  RRVIPVKDPLAVYEPLGHFILSAPRNSASALCIAACELVGGHRDQAMAAATAIQLIHAAT 120

Query: 121 CTHEYPPLTARGKRAAVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRVM 180
           CTHEYPPLTA G RAAVV+RVY  ++QLMTGDGI PMGFEILAESCDWSERGSERVRRVM
Sbjct: 121 CTHEYPPLTASGTRAAVVERVYKPSIQLMTGDGIAPMGFEILAESCDWSERGSERVRRVM 180

Query: 181 VEVARAMGTEGWIGGQFRGLEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKMR 240
           VEV+RAMGTEGWIGGQFRGL+EEATVEEVIEK EGGLHACGGACGAIMGGGNEEEIEKMR
Sbjct: 181 VEVSRAMGTEGWIGGQFRGLDEEATVEEVIEKREGGLHACGGACGAIMGGGNEEEIEKMR 240

Query: 241 KYGKLV 247
           KYGKL+
Sbjct: 241 KYGKLI 246

[Close]

BLAST of CSPI07G09860 vs. ExPASy TrEMBL
Match: A0A6J1IK44 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111475905 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 3.1e-117
Identity = 223/301 (74.09%), Postives = 248/301 (82.39%), Query Frame = 0


Query: 1   MAISLNLLQLQPNLARSKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60
           MAISLNLLQL  N +  KF  +N L P  Y R P R+  VMSQITPSYWAAINEDIE+HL
Sbjct: 1   MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEEHL 60

Query: 61  RRVIPVKDPAAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120
           RR+I  KDP  VYEPLGHF+FSAPRNSA A+CIAACE VGGHRDQAMAAATA+QLIYAAT
Sbjct: 61  RRIIIAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQLIYAAT 120

Query: 121 CTHEYPPLTARG-KRAAVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRV 180
            T EYPPLTARG   AA+VDRVY  N+QL+TG GI P+GFEILA SCD SE GS+RVRRV
Sbjct: 121 YTREYPPLTARGSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESGSDRVRRV 180

Query: 181 MVEVARAMGTEGWIGGQFRGLEE---EATVEEVIEKTEGGLHACGGACGAIMGGGNEEEI 240
           M E+ARAMG+EGWIGGQF+ LEE    A  EEVIEKTEG LHA GGACGAI+G G+EEEI
Sbjct: 181 MGEMARAMGSEGWIGGQFKELEEVTAAAEAEEVIEKTEGELHARGGACGAILGSGSEEEI 240

Query: 241 EKMRKYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLD 298
           EKMRKYG++VG+VKGL++ VFGGKENERKREKI+ELK LAFKELEGF GE V Q+  F D
Sbjct: 241 EKMRKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGEKVDQMCNFFD 300

[Close]

BLAST of CSPI07G09860 vs. ExPASy TrEMBL
Match: A0A2N9F8D7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11152 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 4.1e-69
Identity = 134/276 (48.55%), Postives = 192/276 (69.57%), Query Frame = 0


Query: 33  LPPRSAAVMSQITPSYWAAINEDIEDHLRRVIPVKDPAAVYEPLGHFIFSAPRNSAPALC 92
           LP RS  +      SYWA++N +IE HL++ IP++ P  V+EP+ H +F+AP+N+APALC
Sbjct: 27  LPHRSMMITMSQNQSYWASVNSEIEAHLKQAIPLRPPLQVFEPMHHLVFAAPQNTAPALC 86

Query: 93  IAACELVGGHRDQAMAAATAIQLIYAATCTHEYPPLT--ARGKRAAVVDRVYGSNVQLMT 152
           +AACELVGGHRDQAMAAA+A+ L++AA+ THE+ PLT   R K   V+   YG N++L+ 
Sbjct: 87  LAACELVGGHRDQAMAAASALHLMHAASFTHEHLPLTDRPRPKSRPVIHHAYGPNIELLL 146

Query: 153 GDGITPMGFEILAESCDWSERGSERVRRVMVEVARAMGTEGWIGGQFRGLE--------- 212
           GD I P GFE+LA S D ++  S+R+ RV +E+ RAMG++G + GQ+  LE         
Sbjct: 147 GDAIIPFGFELLARSDDPAQNNSDRILRVTIEITRAMGSQGMVEGQYYELECPQSDGEEL 206

Query: 213 -EEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKMRKYGKLVGIVKGLTQIVFGGK 272
            +   +E+V +K EGGLHACG ACGAI+GGG+EEEIEK+R++G  VG+++G+  +   G+
Sbjct: 207 CDVGWIEQVCKKKEGGLHACGAACGAILGGGSEEEIEKLRRFGLYVGMIQGM--LHGAGR 266

Query: 273 ENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLD 297
           + +  +E +EEL+ LA KELE F G  V  I  F++
Sbjct: 267 KEKGLKEVVEELRNLALKELEEFKGRKVEAISSFVN 300

[Close]

BLAST of CSPI07G09860 vs. NCBI nr
Match: XP_004139865.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Cucumis sativus] >KGN44166.1 hypothetical protein Csa_016347 [Cucumis sativus])

HSP 1 Score: 597.4 bits (1539), Expect = 6.7e-167
Identity = 297/300 (99.00%), Postives = 298/300 (99.33%), Query Frame = 0


Query: 1   MAISLNLLQLQPNLARSKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60
           MAISLNLLQLQPNLAR KFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPVKDPAAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120
           RRVIPVKDP AVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT
Sbjct: 61  RRVIPVKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120

Query: 121 CTHEYPPLTARGKRAAVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRVM 180
           CTHEYPPLTARGKRA+VVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRVM
Sbjct: 121 CTHEYPPLTARGKRASVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRVM 180

Query: 181 VEVARAMGTEGWIGGQFRGLEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKMR 240
           VEVARAMGTEGWIGGQFRGLEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKMR
Sbjct: 181 VEVARAMGTEGWIGGQFRGLEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKMR 240

Query: 241 KYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFVRL 300
           KYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFVRL
Sbjct: 241 KYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFVRL 300

[Close]

BLAST of CSPI07G09860 vs. NCBI nr
Match: KAA0031902.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Cucumis melo var. makuwa])

HSP 1 Score: 543.5 bits (1399), Expect = 1.1e-150
Identity = 270/300 (90.00%), Postives = 281/300 (93.67%), Query Frame = 0


Query: 1   MAISLNLLQLQPNLARSKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60
           MAISLNLLQLQPNLAR KFFQTN +PP PYVR PPRS   MSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNLVPPAPYVRPPPRSTVFMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPVKDPAAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120
           RRVIPVKDP AVYEPLGHFI SAPRNSA ALCIAACELVGGHRDQAMAAATAIQLI+AAT
Sbjct: 61  RRVIPVKDPLAVYEPLGHFILSAPRNSASALCIAACELVGGHRDQAMAAATAIQLIHAAT 120

Query: 121 CTHEYPPLTARGKRAAVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRVM 180
           CTHEYPPLTA G RAAVV+RVY  ++QLMTGDGI PMGFEILAESCDWSERGSERVRRVM
Sbjct: 121 CTHEYPPLTASGTRAAVVERVYRPSIQLMTGDGIAPMGFEILAESCDWSERGSERVRRVM 180

Query: 181 VEVARAMGTEGWIGGQFRGLEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKMR 240
           VEV+RAMGTEGWIGGQFRGL+EEATVEEVIEK EGGLHACGGACGAIMGGGNEEEIEKMR
Sbjct: 181 VEVSRAMGTEGWIGGQFRGLDEEATVEEVIEKREGGLHACGGACGAIMGGGNEEEIEKMR 240

Query: 241 KYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFVRL 300
           KYGKLVG+VKGLT+ VFGGKENE+KREKIEELKVLAFKELEGFNGEMV +IYGFLDFV L
Sbjct: 241 KYGKLVGMVKGLTKNVFGGKENEKKREKIEELKVLAFKELEGFNGEMVHEIYGFLDFVGL 300

[Close]

BLAST of CSPI07G09860 vs. NCBI nr
Match: XP_038896497.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 478.0 bits (1229), Expect = 5.9e-131
Identity = 240/298 (80.54%), Postives = 261/298 (87.58%), Query Frame = 0


Query: 1   MAISLNLLQLQPNLARSKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60
           MAISLNLLQLQ N AR KF + N + P  Y R P RS  VMSQITPSYWA INEDIEDHL
Sbjct: 1   MAISLNLLQLQANPARPKFLKWNPVRPAVYFRAPARSTVVMSQITPSYWATINEDIEDHL 60

Query: 61  RRVIPVKDPAAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120
           R+VIP KDP AV+EPLGHFIFSAPRNSAPALCIAACELVGG RD+AMAAATA+QLI+AAT
Sbjct: 61  RQVIPAKDPPAVFEPLGHFIFSAPRNSAPALCIAACELVGGRRDKAMAAATALQLIHAAT 120

Query: 121 CTHEYPPLTARG-KRAAVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRV 180
            T EYPPLTAR   RAAVVDR+YG+N+QL+TGD I P+ FEILA SCDWSE GSERV+ V
Sbjct: 121 YTREYPPLTAREISRAAVVDRIYGANIQLLTGDAIAPIVFEILAGSCDWSESGSERVQHV 180

Query: 181 MVEVARAMGTEGWIGGQFRGLEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKM 240
           MVE+ARAMGTEGW+GGQFRGLEEEAT EEV EKTEGGLHACGGACGAI+GGG+EEEIEKM
Sbjct: 181 MVEMARAMGTEGWVGGQFRGLEEEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIEKM 240

Query: 241 RKYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDF 298
           RKYGKLVG+VKGL++ VFGGKENERKREKIEE KVLAFK LEGF GE V +IYGFLDF
Sbjct: 241 RKYGKLVGMVKGLSKNVFGGKENERKREKIEEFKVLAFKVLEGFKGEKVHEIYGFLDF 298

[Close]

BLAST of CSPI07G09860 vs. NCBI nr
Match: XP_016900454.1 (PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cucumis melo])

HSP 1 Score: 451.8 bits (1161), Expect = 4.5e-123
Identity = 222/246 (90.24%), Postives = 230/246 (93.50%), Query Frame = 0


Query: 1   MAISLNLLQLQPNLARSKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60
           MAISLNLLQLQPNLAR KFFQTN +PP PYVR PPRS   MSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNLVPPAPYVRPPPRSTVFMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPVKDPAAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120
           RRVIPVKDP AVYEPLGHFI SAPRNSA ALCIAACELVGGHRDQAMAAATAIQLI+AAT
Sbjct: 61  RRVIPVKDPLAVYEPLGHFILSAPRNSASALCIAACELVGGHRDQAMAAATAIQLIHAAT 120

Query: 121 CTHEYPPLTARGKRAAVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRVM 180
           CTHEYPPLTA G RAAVV+RVY  ++QLMTGDGI PMGFEILAESCDWSERGSERVRRVM
Sbjct: 121 CTHEYPPLTASGTRAAVVERVYKPSIQLMTGDGIAPMGFEILAESCDWSERGSERVRRVM 180

Query: 181 VEVARAMGTEGWIGGQFRGLEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKMR 240
           VEV+RAMGTEGWIGGQFRGL+EEATVEEVIEK EGGLHACGGACGAIMGGGNEEEIEKMR
Sbjct: 181 VEVSRAMGTEGWIGGQFRGLDEEATVEEVIEKREGGLHACGGACGAIMGGGNEEEIEKMR 240

Query: 241 KYGKLV 247
           KYGKL+
Sbjct: 241 KYGKLI 246

[Close]

BLAST of CSPI07G09860 vs. NCBI nr
Match: XP_023536167.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 445.7 bits (1145), Expect = 3.3e-121
Identity = 228/298 (76.51%), Postives = 251/298 (84.23%), Query Frame = 0


Query: 1   MAISLNLLQLQPNLARSKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60
           MAISLNLLQL  N +  KF  +N L P  Y R P R+  VMSQITPSYWAAINEDI+DHL
Sbjct: 1   MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPARATVVMSQITPSYWAAINEDIDDHL 60

Query: 61  RRVIPVKDPAAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120
           RRVI  KDP AVYEPLGHF+FSAPRNSA A+CIAACELVGGHRDQAMAAATA+QLIYAAT
Sbjct: 61  RRVIIAKDPPAVYEPLGHFVFSAPRNSAAAMCIAACELVGGHRDQAMAAATALQLIYAAT 120

Query: 121 CTHEYPPLTARG-KRAAVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRV 180
            T EYPPLTARG   AAVVDRVYG N+QL+TG GI P+GFEILA SCD SE GSERVRRV
Sbjct: 121 YTREYPPLTARGISNAAVVDRVYGPNIQLLTGVGIAPIGFEILAGSCDLSESGSERVRRV 180

Query: 181 MVEVARAMGTEGWIGGQFRGLEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKM 240
           MVE+ARAMG+EGWIGGQF+ LEE    EEVIE TEG LHA GGACGAI+GGG+EEEIEKM
Sbjct: 181 MVEMARAMGSEGWIGGQFKELEEVTAAEEVIEMTEGELHARGGACGAILGGGSEEEIEKM 240

Query: 241 RKYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDF 298
           RKYG++VG+VKGL++ VFGGKENERKREKI+ELK LAFKELEGF G+ V Q+  F DF
Sbjct: 241 RKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGQKVDQMCNFFDF 298

[Close]

BLAST of CSPI07G09860 vs. TAIR 10
Match: AT4G38460.1 (geranylgeranyl reductase )

HSP 1 Score: 138.3 bits (347), Expect = 1.0e-32
Identity = 93/307 (30.29%), Postives = 153/307 (49.84%), Query Frame = 0


Query: 24  SLPPMPY---VRLPPRSAAVMSQITP--------SYWAAINEDIEDHLRRVIPVKDPAAV 83
           SLP  P+   ++L P +    S   P        +YW  +  +I   L   IPVK PA +
Sbjct: 15  SLPEKPHTLPMKLSPAAIRSSSSSAPGSLNFDLRTYWTTLITEINQKLDEAIPVKHPAGI 74

Query: 84  YEPLGHFIFS-APRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAATCTHEYPPL--- 143
           YE + + + +   + + P +C+AACEL GG R  A   A A+++++AA+  H+  P    
Sbjct: 75  YEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDD 134

Query: 144 --TARGKRAAVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRVMVEVARA 203
               RGK +     VYGS + ++ GD + P+ F+ +             + R++ E+AR 
Sbjct: 135 DPVRRGKPSN--HTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRLITEIART 194

Query: 204 MGTEGWIGGQFRGLE-EEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKMRKYGKL 263
           +G+ G   GQ+  LE     +  V EK  G +  C   CG ++GG  E+E++ +R+YG+ 
Sbjct: 195 VGSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRA 254

Query: 264 VGIVKGLTQIVFGGKENERK----------REKIEELKVLAFKELEGFN-----GEMVPQ 298
           VG+   L Q+V    E+++K           E  EELK  A KEL+ F+     G+ +  
Sbjct: 255 VGM---LYQVVDDITEDKKKSYDGGAEKGMMEMAEELKEKAKKELQVFDNKYGGGDTLVP 314

[Close]

BLAST of CSPI07G09860 vs. TAIR 10
Match: AT4G36810.1 (geranylgeranyl pyrophosphate synthase 1 )

HSP 1 Score: 113.6 bits (283), Expect = 2.7e-25
Identity = 82/292 (28.08%), Postives = 137/292 (46.92%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPVKDPAAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQA 106
           SY     E +   L   +P+++P  ++E + + + +  +   P LCIAACELVGG    A
Sbjct: 78  SYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTA 137

Query: 107 MAAATAIQLIYAATCTHEYPPL-----TARGKRAAVVDRVYGSNVQLMTGDGITPMGFEI 166
           M AA A+++I+  +  H+  P        RGK      +V+G +V ++ GD +    FE 
Sbjct: 138 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGK--PTNHKVFGEDVAVLAGDALLSFAFEH 197

Query: 167 LAESCDWSERGSERVRRVMVEVARAMGTEGWIGGQFRGLEEEAT------VEEV----IE 226
           LA +         RV R + E+A+A+GTEG + GQ   +  E        +E +    + 
Sbjct: 198 LASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLH 257

Query: 227 KTEGGLHACGGACGAIMGGGNEEEIEKMRKYGKLVG----IVKGLTQIVFGGKE------ 286
           KT   L A     GAI+GGG+++EIE++RK+ + +G    +V  +  +    KE      
Sbjct: 258 KTAALLEA-SAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAG 317

Query: 287 ---------------NERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV 299
                           E+ RE  E+L   A  +L GF+ + V  +    +++
Sbjct: 318 KDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYI 366

[Close]

BLAST of CSPI07G09860 vs. TAIR 10
Match: AT3G32040.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 112.8 bits (281), Expect = 4.7e-25
Identity = 84/294 (28.57%), Postives = 137/294 (46.60%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPVKDPAAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQA 106
           SY     E +   L   +P +DP A+ E + + + +  +   P LCIAACELVGG    A
Sbjct: 68  SYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATA 127

Query: 107 MAAATAIQLIYAATCTHEYPPL-----TARGKRAAVVDRVYGSNVQLMTGDGITPMGFEI 166
           M+AA A+++I+ ++  H+  P        RGK      +V+G ++ ++ GD +  + FE 
Sbjct: 128 MSAACAVEMIHTSSLIHDDLPCMDDADLRRGK--PTNHKVFGEHMAVLAGDALLALAFEH 187

Query: 167 LAESCDWSERGSERVRRVMVEVARAMGTEGWIGGQFR------------GLEEEATVEEV 226
           +           ER+ R + E+A+A+GT+G + GQ              GLE    +   
Sbjct: 188 MTVVSS-GLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIH-- 247

Query: 227 IEKTEGGLHACGGACGAIMGGGNEEEIEKMRKYGKLVGIVKGLTQIVFGGKEN------- 286
           + KT   L A     GAI+GGG EEEI+K+RKYG+ +G++  +   +    E+       
Sbjct: 248 LHKTAALLEA-AAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKT 307

Query: 287 ------------------ERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV 299
                             ER RE  E+L+  A ++L GF+   V  +     ++
Sbjct: 308 AGKDVMARKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSNKVAPLVALASYI 355

[Close]

BLAST of CSPI07G09860 vs. TAIR 10
Match: AT3G14510.1 (Polyprenyl synthetase family protein )

HSP 1 Score: 112.5 bits (280), Expect = 6.1e-25
Identity = 71/203 (34.98%), Postives = 111/203 (54.68%), Query Frame = 0


Query: 62  RVIPVKDPAAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAATC 121
           R +P+++P  V E + + + +  +   P LCIA CELVGG    AM+AA A+++I+ ++ 
Sbjct: 7   RSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSL 66

Query: 122 THEYPPL-----TARGKRAAVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERV 181
            H+  P        RGK      +V+G ++ ++ GD +  + FE +          SER+
Sbjct: 67  IHDDLPCMDNADLRRGK--PTNHKVFGEDMAVLAGDALLALAFEHMTVVSS-GLVASERM 126

Query: 182 RRVMVEVARAMGTEGWIGGQFRGLEEE------ATVEEV----IEKTEGGLHACGGACGA 241
            R +VE+ARA+GT+G + GQ   L  E        +E +    + KT   L A     GA
Sbjct: 127 IRAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEA-AAVIGA 186

Query: 242 IMGGGNEEEIEKMRKYGKLVGIV 250
           IMGGG EEEIEK+RKY + +G++
Sbjct: 187 IMGGGTEEEIEKLRKYARCIGLL 205

[Close]

BLAST of CSPI07G09860 vs. TAIR 10
Match: AT3G29430.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 112.1 bits (279), Expect = 7.9e-25
Identity = 85/292 (29.11%), Postives = 140/292 (47.95%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPVKDPAAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQA 106
           SY     E +   L   +P+++P  + E + + + +  +   P LCIAACELVGG    A
Sbjct: 65  SYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATA 124

Query: 107 MAAATAIQLIYAATCTHEYPPL-----TARGKRAAVVDRVYGSNVQLMTGDGITPMGFEI 166
           M+AA A+++I+ ++  H+  P        RGK      + +G ++ ++ GD +  + FE 
Sbjct: 125 MSAACAVEMIHTSSLIHDDLPCMDDADLRRGK--PTNHKEFGEDMAVLAGDALLALAFEH 184

Query: 167 LAESCDWSERGSERVRRVMVEVARAMGTEGWIGGQF-----RGLEEEATVEEVIE----- 226
           +    +      ER+ R ++E+A+A+GT+G + GQ      +GL  +    E +E     
Sbjct: 185 MTFVSN-GLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFIHLH 244

Query: 227 KTEGGLHACGGACGAIMGGGNEEEIEKMRKYGKLVGIV------------------KGLT 286
           KT   L A     GAIMGGG EEEIEK+RKY + +G++                  K   
Sbjct: 245 KTAALLEA-AAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAG 304

Query: 287 QIVFGGKEN-------ERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDFV 299
           + V  GK         ER RE  E+L+  A ++L GF+ +    +     ++
Sbjct: 305 KDVMAGKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSDKAAPLVALASYI 352

The following BLAST results are available for this feature:

BLAST of CSPI07G09860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39108	1.5e-31	30.29	Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
Q94ID7	4.1e-26	29.07	Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=39...	[more]
P34802	3.8e-24	28.08	Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplast...	[more]
Q43133	5.0e-24	28.42	Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis al...	[more]
Q9LHR4	6.6e-24	28.57	Geranylgeranyl pyrophosphate synthase 12, chloroplastic OS=Arabidopsis thaliana ...	[more]

BLAST of CSPI07G09860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8P9	3.2e-167	99.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G211090 PE=4 SV=1	[more]
A0A5A7SLD5	5.6e-151	90.00	Heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Cucumis mel...	[more]
A0A1S4DWU7	2.2e-123	90.24	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
A0A6J1IK44	3.1e-117	74.09	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
A0A2N9F8D7	4.1e-69	48.55	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11152 PE=3 SV=1	[more]

BLAST of CSPI07G09860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139865.1	6.7e-167	99.00	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
KAA0031902.1	1.1e-150	90.00	heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Cucumis melo ...	[more]
XP_038896497.1	5.9e-131	80.54	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
XP_016900454.1	4.5e-123	90.24	PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, ch...	[more]
XP_023536167.1	3.3e-121	76.51	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]

BLAST of CSPI07G09860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38460.1	1.0e-32	30.29	geranylgeranyl reductase	[more]
AT4G36810.1	2.7e-25	28.08	geranylgeranyl pyrophosphate synthase 1	[more]
AT3G32040.1	4.7e-25	28.57	Terpenoid synthases superfamily protein	[more]
AT3G14510.1	6.1e-25	34.98	Polyprenyl synthetase family protein	[more]
AT3G29430.1	7.9e-25	29.11	Terpenoid synthases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 41..299 e-value: 1.2E-43 score: 151.2
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 47..248
None	No IPR available	PANTHER	PTHR43281	FARNESYL DIPHOSPHATE SYNTHASE	coord: 27..296
None	No IPR available	PANTHER	PTHR43281:SF6	HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC-LIKE	coord: 27..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G09860.1	CSPI07G09860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004659	prenyltransferase activity