CSPI07G08550 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G08550
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	DUF1985 domain-containing protein
Location	Chr7: 6387879 .. 6388610 (-)
RNA-Seq Expression	CSPI07G08550
Synteny	CSPI07G08550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAATGTCGACGTCATAAAAGCTTTTCGCAACGTCTGTGTCACAAAAGTCGCCCGCGACGTCTGCGTCACAAAAGCCGTCCACGACGTATTGGGACCGCACGTGGGGGAAATATTCTACGACGTGGTAGCGAGCTACGTCGCAGAAAGTATCTCCGACAGATGTTTTGCGACGTTGCTGCCAACGTTATGTGTCGCATCACGATAGCTTTTCGCGATGTTGTTTTGTGTTTTCAGCAACGTTGGGGAATAGCGAGTTTATTATAGTGATTCTATGCGAAAAGAGTGGACGAAAGGAATATTTGCATGCTTAATTGGGTTGTTGACAACCACCAAGAATGGAAGGAACTTGCAGCGAAGGTCTTCAACAATGATCAAGTATGTTCTTTATACTAGTATATTTTATATTTACAATGAATGTTATATATATAGGTATGCTTATTCTGTATTGTTTTCAATATGTCATACATGCAACAATTTGAATTCAATCCTATGTTTCCTGAAGAAGATTTCGTGGAACAAACAGTGTTTGAAGAAAATAAAACAACAGAGGAAACAGAAAATGTTTTTGAAAAAGGAAAATGCTCGAGACAAGCTGAGCGTTCGACTGTTGAAGACTTGCTGAGCATAATTATGGCTAGTAATAAAGCACTGAACAATAAGATGAACATACTGATTGTTAAGGTTGAAGAGATAACAAAATTGTTCAAAGATAAAAACAGTCAAACAGTG

mRNA sequence

ATGCAATGTCGACGTCATAAAAGCTTTTCGCAACGTCTGTGTCACAAAAGTCGCCCGCGACGTCTGCGTCACAAAAGCCGTCCACGACGTATTGGGACCGCACGTGGGGGAAATATTCTACGACGTGGTAGCGAGCTACGTCGCAGAAAGTATCTCCGACAGATGTTTTGCGACGTTGCTGCCAACGTTATGTGTCGCATCACGATAGCTTTTCGCGATGTTGTTTTGTTGGACGAAAGGAATATTTGCATGCTTAATTGGGTTGTTGACAACCACCAAGAATGGAAGGAACTTGCAGCGAAGGTCTTCAACAATGATCAAGTATGCTTATTCTGTATTGTTTTCAATATGTCATACATGCAACAATTTGAATTCAATCCTATGTTTCCTGAAGAAGATTTCGTGGAACAAACAGTGTTTGAAGAAAATAAAACAACAGAGGAAACAGAAAATGTTTTTGAAAAAGGAAAATGCTCGAGACAAGCTGAGCGTTCGACTGTTGAAGACTTGCTGAGCATAATTATGGCTAGTAATAAAGCACTGAACAATAAGATGAACATACTGATTGTTAAGGTTGAAGAGATAACAAAATTGTTCAAAGATAAAAACAGTCAAACAGTG

Coding sequence (CDS)

ATGCAATGTCGACGTCATAAAAGCTTTTCGCAACGTCTGTGTCACAAAAGTCGCCCGCGACGTCTGCGTCACAAAAGCCGTCCACGACGTATTGGGACCGCACGTGGGGGAAATATTCTACGACGTGGTAGCGAGCTACGTCGCAGAAAGTATCTCCGACAGATGTTTTGCGACGTTGCTGCCAACGTTATGTGTCGCATCACGATAGCTTTTCGCGATGTTGTTTTGTTGGACGAAAGGAATATTTGCATGCTTAATTGGGTTGTTGACAACCACCAAGAATGGAAGGAACTTGCAGCGAAGGTCTTCAACAATGATCAAGTATGCTTATTCTGTATTGTTTTCAATATGTCATACATGCAACAATTTGAATTCAATCCTATGTTTCCTGAAGAAGATTTCGTGGAACAAACAGTGTTTGAAGAAAATAAAACAACAGAGGAAACAGAAAATGTTTTTGAAAAAGGAAAATGCTCGAGACAAGCTGAGCGTTCGACTGTTGAAGACTTGCTGAGCATAATTATGGCTAGTAATAAAGCACTGAACAATAAGATGAACATACTGATTGTTAAGGTTGAAGAGATAACAAAATTGTTCAAAGATAAAAACAGTCAAACAGTG

Protein sequence

MQCRRHKSFSQRLCHKSRPRRLRHKSRPRRIGTARGGNILRRGSELRRRKYLRQMFCDVAANVMCRITIAFRDVVLLDERNICMLNWVVDNHQEWKELAAKVFNNDQVCLFCIVFNMSYMQQFEFNPMFPEEDFVEQTVFEENKTTEETENVFEKGKCSRQAERSTVEDLLSIIMASNKALNNKMNILIVKVEEITKLFKDKNSQTV

Homology

[Close]

BLAST of CSPI07G08550 vs. ExPASy TrEMBL
Match: A0A5A7V8N4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G003890 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.7e-19
Identity = 63/126 (50.00%), Postives = 81/126 (64.29%), Query Frame = 0


Query: 88  VVDNHQEWKELAAKVFNNDQVCLFCIVFNMSYMQQFEFNPMFPEEDFVEQTVFEENKTTE 147
           VVD+H EWK+LA +VF+N               +QFEF  MF EEDF+EQ+ F E K T+
Sbjct: 6   VVDSHLEWKDLAERVFDN---------------EQFEFKVMFLEEDFIEQSTFHERKPTK 65

Query: 148 ETENVFEKGKCSRQAERSTVE------DLLSIIMASNKALNNKMNILIVKVEEITKLFKD 207
           ET    EKG+CSRQAE + VE          +IMASN+ALN KM+ ++V+VE + KL K+
Sbjct: 66  ETRKRLEKGECSRQAEHTDVEVPKYFFRFQELIMASNEALNLKMDKMLVEVEGLKKLLKE 116

[Close]

BLAST of CSPI07G08550 vs. ExPASy TrEMBL
Match: A0A5D3E3X1 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold974G00070 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 7.7e-19
Identity = 62/137 (45.26%), Postives = 83/137 (60.58%), Query Frame = 0


Query: 77  LDERNICMLNWVVDNHQEWKELAAKVFNNDQVCLFCIVFNMSYMQQFEFNPMFPEEDFVE 136
           +D+  ICMLNWVVDNH EWK+LA KVF+ND               QF+F  MF EEDFVE
Sbjct: 170 VDDNKICMLNWVVDNHPEWKDLAEKVFDND---------------QFKFEVMF-EEDFVE 229

Query: 137 QTVFEENKTTEETENVFEKGKCSRQAERSTVE------DLLSIIMASNKALNNKMNILIV 196
           + +F EN   EET   FE+G+ S Q E S  +          +I+A+N+ LNNK+++LI 
Sbjct: 230 RMMFHENVMREETNGTFERGESSWQGETSNEKIPDYFLKFQELILANNECLNNKLDLLIK 289

Query: 197 KVEEITKLFKDKNSQTV 208
           +VE +  + K K +QTV
Sbjct: 290 EVESLKDMLKKKVNQTV 290

[Close]

BLAST of CSPI07G08550 vs. ExPASy TrEMBL
Match: A0A5A7UCM5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00080 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.3e-18
Identity = 61/137 (44.53%), Postives = 83/137 (60.58%), Query Frame = 0


Query: 77  LDERNICMLNWVVDNHQEWKELAAKVFNNDQVCLFCIVFNMSYMQQFEFNPMFPEEDFVE 136
           +D+  ICMLNWVVDNH EWK+LA KVF+ND               QF+F  MF EEDFVE
Sbjct: 185 VDDNKICMLNWVVDNHPEWKDLAEKVFDND---------------QFKFEVMF-EEDFVE 244

Query: 137 QTVFEENKTTEETENVFEKGKCSRQAERSTVE------DLLSIIMASNKALNNKMNILIV 196
           + +F EN   EET   F++G+ S Q E S  +          +I+A+N+ LNNK+++LI 
Sbjct: 245 RMMFHENVMREETNGTFDRGESSWQGETSNEKIPDYFLKFQELILANNECLNNKLDLLIK 304

Query: 197 KVEEITKLFKDKNSQTV 208
           +VE    + K+K +QTV
Sbjct: 305 EVESFKDMLKEKVNQTV 305

[Close]

BLAST of CSPI07G08550 vs. ExPASy TrEMBL
Match: A0A5A7VB98 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001390 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 5.5e-17
Identity = 59/136 (43.38%), Postives = 80/136 (58.82%), Query Frame = 0


Query: 78  DERNICMLNWVVDNHQEWKELAAKVFNNDQVCLFCIVFNMSYMQQFEFNPMFPEEDFVEQ 137
           D+  ICMLNWVVD+H EWK+LA KVF+ND               QF+F  MF EEDFVE+
Sbjct: 34  DDNKICMLNWVVDSHPEWKDLAKKVFDND---------------QFKFEAMF-EEDFVER 93

Query: 138 TVFEENKTTEETENVFEKGKCSRQAERSTVE------DLLSIIMASNKALNNKMNILIVK 197
             F E    EET   FE+G+ SRQ E S  +          +I+ +N+ LNNK+++LI +
Sbjct: 94  RTFHEYVMREETNVTFERGESSRQGEASNKKIPDYFLKFQELILTNNECLNNKLDLLIKE 153

Query: 198 VEEITKLFKDKNSQTV 208
           VE +  + K+K +Q V
Sbjct: 154 VESLKDMLKEKVNQIV 153

[Close]

BLAST of CSPI07G08550 vs. ExPASy TrEMBL
Match: A0A0A0K3B0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G212120 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 5.5e-17
Identity = 53/79 (67.09%), Postives = 62/79 (78.48%), Query Frame = 0


Query: 117 MSYMQQFEFNPMFPEEDFVEQTVFEENKTTEETENVFEKGKCSRQAERSTVEDLLSIIMA 176
           MS++QQFEF  MF EEDFVEQ  F E KTT+ETE  FEKG+CSRQ E + +EDLLSIIMA
Sbjct: 1   MSFLQQFEFKAMFLEEDFVEQNTFHERKTTKETEKRFEKGECSRQVEHTNIEDLLSIIMA 60

Query: 177 SNKALNNKMNILIVKVEEI 196
           SN+ALN KM  L+V+ E I
Sbjct: 61  SNEALNWKMEKLLVEAEGI 79

[Close]

BLAST of CSPI07G08550 vs. NCBI nr
Match: KAE8645973.1 (hypothetical protein Csa_015468 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 2.2e-60
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 84  MLNWVVDNHQEWKELAAKVFNNDQVCLFCIVFNMSYMQQFEFNPMFPEEDFVEQTVFEEN 143
           MLNWVVDNHQEWKELAAKVFNN+QVCLFCIVFNMSYMQQFEFNPMFPEEDFVEQTVFEEN
Sbjct: 1   MLNWVVDNHQEWKELAAKVFNNEQVCLFCIVFNMSYMQQFEFNPMFPEEDFVEQTVFEEN 60

Query: 144 KTTEETENVFEKGKCSRQAERSTVEDLLSIIMASNKALNNKMNILIVKVEEITKLFKDKN 203
           KTTEETENVFEKGKCSRQAERSTVEDLLSIIMASNKALNNKMNILIVKVEEITKLFKDKN
Sbjct: 61  KTTEETENVFEKGKCSRQAERSTVEDLLSIIMASNKALNNKMNILIVKVEEITKLFKDKN 120

Query: 204 SQTV 208
           SQTV
Sbjct: 121 SQTV 124

[Close]

BLAST of CSPI07G08550 vs. NCBI nr
Match: KAA0062049.1 (uncharacterized protein E6C27_scaffold89G003890 [Cucumis melo var. makuwa])

HSP 1 Score: 105.5 bits (262), Expect = 5.5e-19
Identity = 63/126 (50.00%), Postives = 81/126 (64.29%), Query Frame = 0


Query: 88  VVDNHQEWKELAAKVFNNDQVCLFCIVFNMSYMQQFEFNPMFPEEDFVEQTVFEENKTTE 147
           VVD+H EWK+LA +VF+N               +QFEF  MF EEDF+EQ+ F E K T+
Sbjct: 6   VVDSHLEWKDLAERVFDN---------------EQFEFKVMFLEEDFIEQSTFHERKPTK 65

Query: 148 ETENVFEKGKCSRQAERSTVE------DLLSIIMASNKALNNKMNILIVKVEEITKLFKD 207
           ET    EKG+CSRQAE + VE          +IMASN+ALN KM+ ++V+VE + KL K+
Sbjct: 66  ETRKRLEKGECSRQAEHTDVEVPKYFFRFQELIMASNEALNLKMDKMLVEVEGLKKLLKE 116

[Close]

BLAST of CSPI07G08550 vs. NCBI nr
Match: TYK30586.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 104.0 bits (258), Expect = 1.6e-18
Identity = 62/137 (45.26%), Postives = 83/137 (60.58%), Query Frame = 0


Query: 77  LDERNICMLNWVVDNHQEWKELAAKVFNNDQVCLFCIVFNMSYMQQFEFNPMFPEEDFVE 136
           +D+  ICMLNWVVDNH EWK+LA KVF+ND               QF+F  MF EEDFVE
Sbjct: 170 VDDNKICMLNWVVDNHPEWKDLAEKVFDND---------------QFKFEVMF-EEDFVE 229

Query: 137 QTVFEENKTTEETENVFEKGKCSRQAERSTVE------DLLSIIMASNKALNNKMNILIV 196
           + +F EN   EET   FE+G+ S Q E S  +          +I+A+N+ LNNK+++LI 
Sbjct: 230 RMMFHENVMREETNGTFERGESSWQGETSNEKIPDYFLKFQELILANNECLNNKLDLLIK 289

Query: 197 KVEEITKLFKDKNSQTV 208
           +VE +  + K K +QTV
Sbjct: 290 EVESLKDMLKKKVNQTV 290

[Close]

BLAST of CSPI07G08550 vs. NCBI nr
Match: KAA0051301.1 (uncharacterized protein E6C27_scaffold55G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 103.2 bits (256), Expect = 2.7e-18
Identity = 61/137 (44.53%), Postives = 83/137 (60.58%), Query Frame = 0


Query: 77  LDERNICMLNWVVDNHQEWKELAAKVFNNDQVCLFCIVFNMSYMQQFEFNPMFPEEDFVE 136
           +D+  ICMLNWVVDNH EWK+LA KVF+ND               QF+F  MF EEDFVE
Sbjct: 185 VDDNKICMLNWVVDNHPEWKDLAEKVFDND---------------QFKFEVMF-EEDFVE 244

Query: 137 QTVFEENKTTEETENVFEKGKCSRQAERSTVE------DLLSIIMASNKALNNKMNILIV 196
           + +F EN   EET   F++G+ S Q E S  +          +I+A+N+ LNNK+++LI 
Sbjct: 245 RMMFHENVMREETNGTFDRGESSWQGETSNEKIPDYFLKFQELILANNECLNNKLDLLIK 304

Query: 197 KVEEITKLFKDKNSQTV 208
           +VE    + K+K +QTV
Sbjct: 305 EVESFKDMLKEKVNQTV 305

[Close]

BLAST of CSPI07G08550 vs. NCBI nr
Match: XP_008464748.1 (PREDICTED: uncharacterized protein LOC103502558 isoform X1 [Cucumis melo])

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-16
Identity = 59/136 (43.38%), Postives = 80/136 (58.82%), Query Frame = 0


Query: 78  DERNICMLNWVVDNHQEWKELAAKVFNNDQVCLFCIVFNMSYMQQFEFNPMFPEEDFVEQ 137
           D+  ICMLNWVVD+H EWK+LA KVF+ND               QF+F  MF EEDFVE+
Sbjct: 59  DDNKICMLNWVVDSHPEWKDLAKKVFDND---------------QFKFEAMF-EEDFVER 118

Query: 138 TVFEENKTTEETENVFEKGKCSRQAERSTVE------DLLSIIMASNKALNNKMNILIVK 197
             F E    EET   FE+G+ SRQ E S  +          +I+ +N+ LNNK+++LI +
Sbjct: 119 RTFHEYVMREETNVTFERGESSRQGEASNKKIPDYFLKFQELILTNNECLNNKLDLLIKE 178

Query: 198 VEEITKLFKDKNSQTV 208
           VE +  + K+K +Q V
Sbjct: 179 VESLKDMLKEKVNQIV 178

The following BLAST results are available for this feature:

BLAST of CSPI07G08550 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI07G08550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V8N4	2.7e-19	50.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3E3X1	7.7e-19	45.26	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold974G00...	[more]
A0A5A7UCM5	1.3e-18	44.53	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VB98	5.5e-17	43.38	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0K3B0	5.5e-17	67.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G212120 PE=4 SV=1	[more]

BLAST of CSPI07G08550 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645973.1	2.2e-60	99.19	hypothetical protein Csa_015468 [Cucumis sativus]	[more]
KAA0062049.1	5.5e-19	50.00	uncharacterized protein E6C27_scaffold89G003890 [Cucumis melo var. makuwa]	[more]
TYK30586.1	1.6e-18	45.26	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
KAA0051301.1	2.7e-18	44.53	uncharacterized protein E6C27_scaffold55G00080 [Cucumis melo var. makuwa]	[more]
XP_008464748.1	1.1e-16	43.38	PREDICTED: uncharacterized protein LOC103502558 isoform X1 [Cucumis melo]	[more]

BLAST of CSPI07G08550 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G08550.1	CSPI07G08550.1	mRNA