CSPI07G05440 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G05440
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	CRM domain-containing protein
Location	Chr7: 4072603 .. 4075017 (+)
RNA-Seq Expression	CSPI07G05440
Synteny	CSPI07G05440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTAATGAGGGTAGGGTTGTAATTTTGCCGCAATTGTTGATGAACAATCGTTGATCCTCAAATTTCATCTTAGTTAGCGAATTGTTGATGAACAATCAACACACCCATTCTTAACTCTTGGATTGTTCTTGATTTCCCTTTCATCTCCCTTAGGGGTTATTTAAAAAACGACTCTTTCCTAGGAATTTACTGATTTACTTTACGACCATGCCTCGCTGCCGCGGGTTATCTATCATCGCCTTTTCAAGGTACGTTCTTCATCTCTAGAAATCTCATGGGTTTCATTCAATGGTTTTGAAATTGAATACATTTTCTCATTTATCAAATTCATCTCAACAGTGTGTATCGTCTTGTTTAAAGTAGATTTCAGGGTTGTCTATGAGTTTTTCCATCTGTTGTGTACACATTTTCCCTTTGGAAAGCATATGGAATTGGATGATTGTGGTATGGTGTTTTTGCAGGGGTTCATTGTTTGGATTCATTCCTCTGATTAGAAATGTATCACCTCTATCTTTATTGAGCATACCCACATCATTTGAGCAGTCCTCACATGGAAGTTGGGAGCATCAAGCAAGTAGTTGTATAGTGAAGTCTCTCAACGAATCAATGTCTAGAGACTGTCCGCCTGGGTTCTCTTTTACTCGGAGATACAGTATGCGGGAGAGCAGTGGTGGGTTTAAAAGATGGCAATCTGTTAGGCATTTTAGCAATGCCGTTGTGGAGCTTAAAACAGACAACAATACTGTCAGGTTTTCTTTTGGTTGTCCTTCTAGTACTAACGGTTCCCGACTGAAACAAAAGGTGGCAAAAACCAAAATTTCTAAGAAGGCTAAATTGAATGAACTCAGATTCTATCGTCTTAAGGCGAAAAAGAAGAAGACATCTCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAGAAGGTTCGATACTATCTATAATTTTTAGTTATTCCTTTAGCTTATAATTGAGTGTAGTCTACTCTCCCTTTATAGAAAAAGTGTGTGGCCATTGTCTTGTAAGAGGAGTATTTGATTTCAGTGCCTGCTGAAAAGCTTTTTATCCACATATAATATGTTTGTGTAGCTGATTGAGTTGATTGAATTTTGATTAGCATTTCTTTGAGTAGCCGTGTCTATGTGCATGTGATAAGATGGCCAGTAACCACTGTTTCTCTGACTTCTGCTTTACACATTTGTAAAACTGTGAAAGTTTATCCTTTGGTTTAGTTCGTGTACTGACTTTGCGTGACTAATGATTTATACATACAAGTGATTGTCATCAAAGTTTAGCTTACAGTTTCATGTAAACCTTTTCTTTTTTATACGAATCATTTGTATGAACAAAAAGAAATATTTCATAGAAAATTTTCAAATGAAGAGTCAAGAATAATTTACTTAGTGTTTATACCTTCAACTCAAGGTAAGTGCATACTAATGGTTCAGTTGAATTTTGAATTAATATGTGGACTAATCGAATTGTTCTAATACTTCTTAATGATCATTTGTTCTTATGAACTATGAAGTTATTTGATCTTTGAAGAAATAAGTATTGTATGTAGGCCAAAAGAAAAGAAGCGTGGCTAATTGAGAAGTTGAGGAAATTTGAGATTCCAAAACCTTTTGTAGAAAAGTATGATCCTGAAATTCTTACTGAGGAAGAGAAGCACTACTTGAAGCGTACAGGGGAGAAAAAGAAGAACTTTGTTCTTTTGGGGAGGCGAGGAGTCTTTGGTGGAGTTGTTCTCAATATGCATATGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAACCTTGCAAGCCTGGGCAGGTTCATGAATATGCCGAAGAACTTACTCGATTGAGCAAAGGCATTGTGATTGACATAAAACCCAACAACAGCATAATTTTCTATCGGGGAAAGAACTATGTGCAGCCCGAAGTAATGTCACCTCCAAATACGCTATCAAAAGACAAGGTAAGCTGATCTCATTCCTGAAAAGTGAAATGATCAAACAAAATACATTTAATTGATTGATGTGAAAAATTACAAAAGGCAAATTAACCTACCACAGTGGAAGTTTTCAAATTCAGTTAACCACTAATCTGTAGAATTTGTCATTAATAGAATTTGGAAATAAGAAGAGTGGATCAAGAAATGGGGAATTAAATCAAACTCTGTAATTTGATTATAATGTTATGTTTTTTCAATTTGAGAAGCCATCGGAAAATGACACAACAATCAACATAACTTTTCCTATGTAAAATATTGCAGGCTTTGGAAAAATATAAGTATGAACAATCACTTGAACATACAAGCCAGTTCATTGAAAAGTTGGAGAAAGAACTTGAAGATTTTCAGAAGCATCTAGCTCAGTTCAAGAGGAGAAAGGAAGATGCCGCTTTAGAATCCATGGTTAACTCTTGA

mRNA sequence

GTTTAATGAGGGTAGGGTTGTAATTTTGCCGCAATTGTTGATGAACAATCGTTGATCCTCAAATTTCATCTTAGTTAGCGAATTGTTGATGAACAATCAACACACCCATTCTTAACTCTTGGATTGTTCTTGATTTCCCTTTCATCTCCCTTAGGGGTTATTTAAAAAACGACTCTTTCCTAGGAATTTACTGATTTACTTTACGACCATGCCTCGCTGCCGCGGGTTATCTATCATCGCCTTTTCAAGGGGTTCATTGTTTGGATTCATTCCTCTGATTAGAAATGTATCACCTCTATCTTTATTGAGCATACCCACATCATTTGAGCAGTCCTCACATGGAAGTTGGGAGCATCAAGCAAGTAGTTGTATAGTGAAGTCTCTCAACGAATCAATGTCTAGAGACTGTCCGCCTGGGTTCTCTTTTACTCGGAGATACAGTATGCGGGAGAGCAGTGGTGGGTTTAAAAGATGGCAATCTGTTAGGCATTTTAGCAATGCCGTTGTGGAGCTTAAAACAGACAACAATACTGTCAGGTTTTCTTTTGGTTGTCCTTCTAGTACTAACGGTTCCCGACTGAAACAAAAGGTGGCAAAAACCAAAATTTCTAAGAAGGCTAAATTGAATGAACTCAGATTCTATCGTCTTAAGGCGAAAAAGAAGAAGACATCTCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAGAAGGCCAAAAGAAAAGAAGCGTGGCTAATTGAGAAGTTGAGGAAATTTGAGATTCCAAAACCTTTTGTAGAAAAGTATGATCCTGAAATTCTTACTGAGGAAGAGAAGCACTACTTGAAGCGTACAGGGGAGAAAAAGAAGAACTTTGTTCTTTTGGGGAGGCGAGGAGTCTTTGGTGGAGTTGTTCTCAATATGCATATGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAACCTTGCAAGCCTGGGCAGGTTCATGAATATGCCGAAGAACTTACTCGATTGAGCAAAGGCATTGTGATTGACATAAAACCCAACAACAGCATAATTTTCTATCGGGGAAAGAACTATGTGCAGCCCGAAGTAATGTCACCTCCAAATACGCTATCAAAAGACAAGGCTTTGGAAAAATATAAGTATGAACAATCACTTGAACATACAAGCCAGTTCATTGAAAAGTTGGAGAAAGAACTTGAAGATTTTCAGAAGCATCTAGCTCAGTTCAAGAGGAGAAAGGAAGATGCCGCTTTAGAATCCATGGTTAACTCTTGA

Coding sequence (CDS)

ATGCCTCGCTGCCGCGGGTTATCTATCATCGCCTTTTCAAGGGGTTCATTGTTTGGATTCATTCCTCTGATTAGAAATGTATCACCTCTATCTTTATTGAGCATACCCACATCATTTGAGCAGTCCTCACATGGAAGTTGGGAGCATCAAGCAAGTAGTTGTATAGTGAAGTCTCTCAACGAATCAATGTCTAGAGACTGTCCGCCTGGGTTCTCTTTTACTCGGAGATACAGTATGCGGGAGAGCAGTGGTGGGTTTAAAAGATGGCAATCTGTTAGGCATTTTAGCAATGCCGTTGTGGAGCTTAAAACAGACAACAATACTGTCAGGTTTTCTTTTGGTTGTCCTTCTAGTACTAACGGTTCCCGACTGAAACAAAAGGTGGCAAAAACCAAAATTTCTAAGAAGGCTAAATTGAATGAACTCAGATTCTATCGTCTTAAGGCGAAAAAGAAGAAGACATCTCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAGAAGGCCAAAAGAAAAGAAGCGTGGCTAATTGAGAAGTTGAGGAAATTTGAGATTCCAAAACCTTTTGTAGAAAAGTATGATCCTGAAATTCTTACTGAGGAAGAGAAGCACTACTTGAAGCGTACAGGGGAGAAAAAGAAGAACTTTGTTCTTTTGGGGAGGCGAGGAGTCTTTGGTGGAGTTGTTCTCAATATGCATATGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAACCTTGCAAGCCTGGGCAGGTTCATGAATATGCCGAAGAACTTACTCGATTGAGCAAAGGCATTGTGATTGACATAAAACCCAACAACAGCATAATTTTCTATCGGGGAAAGAACTATGTGCAGCCCGAAGTAATGTCACCTCCAAATACGCTATCAAAAGACAAGGCTTTGGAAAAATATAAGTATGAACAATCACTTGAACATACAAGCCAGTTCATTGAAAAGTTGGAGAAAGAACTTGAAGATTTTCAGAAGCATCTAGCTCAGTTCAAGAGGAGAAAGGAAGATGCCGCTTTAGAATCCATGGTTAACTCTTGA

Protein sequence

MPRCRGLSIIAFSRGSLFGFIPLIRNVSPLSLLSIPTSFEQSSHGSWEHQASSCIVKSLNESMSRDCPPGFSFTRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTNGSRLKQKVAKTKISKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDAALESMVNS*

Homology

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BLAST of CSPI07G05440 vs. ExPASy Swiss-Prot
Match: Q67XL4 (Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g25440 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.0e-39
Identity = 104/239 (43.51%), Postives = 147/239 (61.51%), Query Frame = 0


Query: 103 KTDNNTVRFSFGCPSSTNGSRLKQKVAKTKISKKAKLNELRFYRLKAKKKKTSPNPEVRI 162
           +T ++ +  S    S    S  K K  K K  K+A +  L+F+R K KK+      E +I
Sbjct: 83  ETGDDDISKSENSSSQDGDSCTKLKRKKLK-GKRAVVRWLKFFRWKKKKEFERMTSEEKI 142

Query: 163 RYSLEKAKRKEAWLIEKLRKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRR 222
              L KA++KE  L+E ++K E  +     +DPEILT EE  Y  + G K KN+V +GRR
Sbjct: 143 LNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRR 202

Query: 223 GVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYR 282
           G++ GV+LNMH+HWKKH+T++V+ K   P +V E A EL RL+ GIV+D+   N+II YR
Sbjct: 203 GIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYR 262

Query: 283 GKNYVQP--EVMSPPNTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKR 340
           GKNYVQP  E+MSP  TL + KAL+K K   +L    ++I +LE+EL+  Q   A+ KR
Sbjct: 263 GKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQ-AETKR 319

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BLAST of CSPI07G05440 vs. ExPASy Swiss-Prot
Match: Q9LT57 (CRM-domain containing factor CFM9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CFM9 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.7e-36
Identity = 91/211 (43.13%), Postives = 132/211 (62.56%), Query Frame = 0


Query: 117 SSTNGSRLKQKVAKTKISKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWL 176
           S++ G  ++ KV      +  K   LR  R   K KK     E R+ Y+L++AK+K A L
Sbjct: 13  STSRGRSMRSKVESRMRKESGK--TLREIRRAKKLKKKLMTDEERLIYNLKRAKKKVALL 72

Query: 177 IEKLRKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHW 236
           ++KL+K+++P+     +DPE+ T E+    K+ G K KN+V +G RGVFGGVV NMHMHW
Sbjct: 73  LQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMHMHW 132

Query: 237 KKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPN 296
           K HETV+V C      ++ E A  + RLS G+VI+I    +II +RG+NY QP+ + P N
Sbjct: 133 KFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPKNLIPVN 192

Query: 297 TLSKDKALEKYKYEQSLEHTSQFIEKLEKEL 328
           TL+K KAL K ++EQ+LE     I+K E++L
Sbjct: 193 TLTKRKALFKARFEQALESQKLNIKKTEQQL 221

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BLAST of CSPI07G05440 vs. ExPASy Swiss-Prot
Match: Q8L7C2 (CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CFM2 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.4e-20
Identity = 72/226 (31.86%), Postives = 120/226 (53.10%), Query Frame = 0


Query: 120 NGSRLKQKVAKTKISKKAK--LNELRFYRLKAKKKKTS----PNPEVRIRYSLEKAKRKE 179
           N   +K +  K  I  +AK   + ++ +++K++++ +         +++  +LEK    E
Sbjct: 498 NEEEIKPRAVKEDIELEAKDQKDHIQTHQMKSRQRNSPEAILEKTSMKLSMALEKKANAE 557

Query: 180 AWLIEKLRKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMH 239
             L + L   E P+  +   D E +T +EK+ L++ G K K F+LLGRRGVF G + NMH
Sbjct: 558 KVLAD-LENRESPQ--LSDIDKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMH 617

Query: 240 MHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIK---PNNSIIFYRGKNYVQPE 299
           +HWK  E VK+IC        H+ AE L   S GI++ ++      +II YRGKNY +P+
Sbjct: 618 LHWKYRELVKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVYRGKNYERPQ 677

Query: 300 VMSPPNTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQ 337
            + P   LSK +AL++    Q  +     + KL   +E+  + L +
Sbjct: 678 CLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQLVE 720

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BLAST of CSPI07G05440 vs. ExPASy Swiss-Prot
Match: Q2R1U8 (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=CFM3 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.7e-20
Identity = 66/191 (34.55%), Postives = 101/191 (52.88%), Query Frame = 0


Query: 161 RIRYSLEKAKRKEAWLIEKLRKFEIP-KPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLL 220
           ++ + L+ A++K       L K E   KP      PE +T+EE+   ++ G + K F+LL
Sbjct: 554 KLEWKLQLAQKKIEKAERVLGKVETALKPTEGIQPPETITDEERFMFRKLGLRMKAFLLL 613

Query: 221 GRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVID---IKPNN 280
           GRRGVF G + NMH+HWK  E VK++ K    G V + A  L   S GI++    +    
Sbjct: 614 GRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIALSLEAESGGILVSVDKVSKGY 673

Query: 281 SIIFYRGKNYVQPEVMSPPNTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQ 340
           +I+ +RGK+Y +P  + P N LSK KAL +    Q  E  S  I  L + ++  +  L Q
Sbjct: 674 AIVVFRGKDYARPSKLRPRNLLSKRKALARSIEIQRREALSHHIATLNRRVKKLKAELLQ 733

Query: 341 FKRRKEDAALE 348
            +  KE+  +E
Sbjct: 734 MEGVKEEGDVE 744

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BLAST of CSPI07G05440 vs. ExPASy Swiss-Prot
Match: F4J2U9 (CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CFM3A PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.5e-19
Identity = 71/185 (38.38%), Postives = 100/185 (54.05%), Query Frame = 0


Query: 166 LEKAKRKEAWLIEKLRKFE--------IPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFV 225
           + K +RK A+   KL K E          KP  ++ DPE +T+EE+   ++ G K K F+
Sbjct: 598 VRKLERKLAFAERKLLKAERGLAKVEVCLKPAEQREDPESITDEERFMFRKLGLKMKAFL 657

Query: 226 LLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDI---KP 285
           LLGRRGVF G V NMH+HWK  E VK+I K      V + A  L   S GI++ I     
Sbjct: 658 LLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGVKKVALALEAESGGILVSIDKVTK 717

Query: 286 NNSIIFYRGKNYVQPEVMSPPNTLSKDKAL----EKYKYEQSLEHTSQF---IEKLEKEL 333
             +II YRG++Y +P ++ P N L+K KAL    E  + E  L+H S      ++L  E+
Sbjct: 718 GYAIIVYRGQDYKRPTMLRPKNLLTKRKALARSIELQRREGLLKHISTMQAKAKQLRAEI 777

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BLAST of CSPI07G05440 vs. ExPASy TrEMBL
Match: A0A0A0K5Y2 (CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G062730 PE=4 SV=1)

HSP 1 Score: 694.9 bits (1792), Expect = 1.7e-196
Identity = 351/352 (99.72%), Postives = 352/352 (100.00%), Query Frame = 0


Query: 1   MPRCRGLSIIAFSRGSLFGFIPLIRNVSPLSLLSIPTSFEQSSHGSWEHQASSCIVKSLN 60
           MPRCRGLSIIAFSRGSLFGFIPLIRNVSPLSLLSIPTSFEQSSHGSWEHQASSCIVKSLN
Sbjct: 1   MPRCRGLSIIAFSRGSLFGFIPLIRNVSPLSLLSIPTSFEQSSHGSWEHQASSCIVKSLN 60

Query: 61  ESMSRDCPPGFSFTRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTN 120
           ESMSRDCPPGFSFTRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTN
Sbjct: 61  ESMSRDCPPGFSFTRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTN 120

Query: 121 GSRLKQKVAKTKISKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKL 180
           GSRLKQKVAKTK+SKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKL
Sbjct: 121 GSRLKQKVAKTKMSKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKL 180

Query: 181 RKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHE 240
           RKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHE
Sbjct: 181 RKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHE 240

Query: 241 TVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLSK 300
           TVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLSK
Sbjct: 241 TVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLSK 300

Query: 301 DKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDAALESMVNS 353
           DKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDAALESMVNS
Sbjct: 301 DKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDAALESMVNS 352

[Close]

BLAST of CSPI07G05440 vs. ExPASy TrEMBL
Match: A0A1S3C151 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495436 PE=4 SV=1)

HSP 1 Score: 607.8 bits (1566), Expect = 2.8e-170
Identity = 317/345 (91.88%), Postives = 324/345 (93.91%), Query Frame = 0


Query: 1   MPRCRGLSIIAFSRGSLFGFIPLIRNVSPLSLLSIPTSFEQSSHGSWEHQASSCIVKSLN 60
           MPRCRG SII  SRGSLFGF  LIRN SPLSLLS+PTSF QSSHGS EHQASS IVKSLN
Sbjct: 1   MPRCRGQSIITISRGSLFGFTSLIRNASPLSLLSVPTSFGQSSHGSCEHQASSRIVKSLN 60

Query: 61  ESMSRDCPPGFSFTRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTN 120
           ES SRDCPPG S T RYSM ES GGFKRWQSVRHFSNAVVELKTD+NTVRFSFG PSSTN
Sbjct: 61  ESTSRDCPPGSSLTWRYSMWESYGGFKRWQSVRHFSNAVVELKTDSNTVRFSFG-PSSTN 120

Query: 121 GSRLKQ-KVAKTKISKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK 180
           GS+LKQ KVAKTK+SKK KLNELR YRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK
Sbjct: 121 GSQLKQKKVAKTKLSKKDKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK 180

Query: 181 LRKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKH 240
           LRKFEIPK  VEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKH
Sbjct: 181 LRKFEIPKSVVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKH 240

Query: 241 ETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLS 300
           ETVKVICKPCKPGQVHEYAEEL+RLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPP+TLS
Sbjct: 241 ETVKVICKPCKPGQVHEYAEELSRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLS 300

Query: 301 KDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDA 345
           KDKALEKY+YEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDA
Sbjct: 301 KDKALEKYRYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDA 344

[Close]

BLAST of CSPI07G05440 vs. ExPASy TrEMBL
Match: A0A5A7SK96 (Putative CRM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002570 PE=4 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 6.7e-164
Identity = 307/333 (92.19%), Postives = 314/333 (94.29%), Query Frame = 0


Query: 13  SRGSLFGFIPLIRNVSPLSLLSIPTSFEQSSHGSWEHQASSCIVKSLNESMSRDCPPGFS 72
           S GSLFGF  LIRN SPLSLLS+PTSF QSSHGS EHQASS IVKSLNES SRDCPPG S
Sbjct: 102 SGGSLFGFTSLIRNASPLSLLSVPTSFGQSSHGSCEHQASSRIVKSLNESTSRDCPPGSS 161

Query: 73  FTRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTNGSRLKQ-KVAKT 132
            T RYSM ES GGFKRWQSVRHFSNAVVELKTD+NTVRFSFG PSSTNGS+LKQ KVAKT
Sbjct: 162 LTWRYSMWESYGGFKRWQSVRHFSNAVVELKTDSNTVRFSFG-PSSTNGSQLKQKKVAKT 221

Query: 133 KISKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEIPKPFVE 192
           K+SKK KLNELR YRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEIPK  VE
Sbjct: 222 KLSKKDKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEIPKSVVE 281

Query: 193 KYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKP 252
           KYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKP
Sbjct: 282 KYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKP 341

Query: 253 GQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLSKDKALEKYKYEQ 312
           GQVHEYAEEL+RLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPP+TLSKDKALEKY+YEQ
Sbjct: 342 GQVHEYAEELSRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQ 401

Query: 313 SLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDA 345
           SLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDA
Sbjct: 402 SLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDA 433

[Close]

BLAST of CSPI07G05440 vs. ExPASy TrEMBL
Match: A0A6J1HVJ0 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467053 PE=4 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 2.7e-157
Identity = 296/353 (83.85%), Postives = 314/353 (88.95%), Query Frame = 0


Query: 1   MPRCRGLSIIAFSRGSLFGFIPLIRNVSPLSLLSIPTSFEQSSHGSWEHQASSCIVKSLN 60
           M R   LS IA SR SL+GFI LIRNVS LSL +IPTSF QSS+ S EHQ S+CI KSL 
Sbjct: 1   MSRGHALS-IAISRDSLYGFISLIRNVSRLSLFNIPTSFGQSSYESCEHQISNCISKSLQ 60

Query: 61  ESMSRDCPPGFSFTRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTN 120
           ES S   PPGF FT+RYSM ES GGF++WQSVRHFSN  VELKTD+N VRFSFG  SSTN
Sbjct: 61  ESTSIRYPPGFFFTKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTN 120

Query: 121 GSRLKQ-KVAKTKISKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK 180
           GS  KQ KVAK K+SKKAKLNELR YRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK
Sbjct: 121 GSPRKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK 180

Query: 181 LRKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKH 240
           LRKFE+PK  +E YDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMH+HWKKH
Sbjct: 181 LRKFEVPKSVLENYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKH 240

Query: 241 ETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLS 300
           ETVKVICKPCKPGQVHEYAEEL RLSKGIVIDIKPNNSI+FYRGKNYVQPEVMSPP+TLS
Sbjct: 241 ETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVQPEVMSPPDTLS 300

Query: 301 KDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDAALESMVNS 353
           KDKALEKYKYEQSLEHTSQF+EKLEKELEDF KHLAQFKR+KE+AA+E MVNS
Sbjct: 301 KDKALEKYKYEQSLEHTSQFVEKLEKELEDFHKHLAQFKRKKEEAAVEFMVNS 352

[Close]

BLAST of CSPI07G05440 vs. ExPASy TrEMBL
Match: A0A6J1HK68 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111463795 PE=4 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 5.7e-155
Identity = 294/353 (83.29%), Postives = 313/353 (88.67%), Query Frame = 0


Query: 1   MPRCRGLSIIAFSRGSLFGFIPLIRNVSPLSLLSIPTSFEQSSHGSWEHQASSCIVKSLN 60
           M R   LS IA SR SL+GFI LIRNVS LSL +IP+SF QSS+ S E+Q S+CI KSL 
Sbjct: 1   MSRGHSLS-IAISRDSLYGFISLIRNVSRLSLFNIPSSFGQSSYRSCEYQISNCISKSLQ 60

Query: 61  ESMSRDCPPGFSFTRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTN 120
           ES S   PPGF F +RYSM ES GGF++WQSVRHFSN  VELKTD+N VRFSFG  SSTN
Sbjct: 61  ESTSIRYPPGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTN 120

Query: 121 GSRLKQ-KVAKTKISKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK 180
           GS  KQ KVAK K+SKKAKLNELR YRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK
Sbjct: 121 GSPRKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK 180

Query: 181 LRKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKH 240
           LRKFE+PK  +E YDPEILTEEEKHYLKRTGEKKKNF+LLGRRGVFGGVVLNMH+HWKKH
Sbjct: 181 LRKFEVPKSVLENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGVFGGVVLNMHLHWKKH 240

Query: 241 ETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLS 300
           ETVKVICKPCKPGQVHEYAEEL RLSKGIVIDIKPNNSIIFYRGKNYV+PEVMSP +TLS
Sbjct: 241 ETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIIFYRGKNYVRPEVMSPSDTLS 300

Query: 301 KDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDAALESMVNS 353
           KDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKR+KE+AALE MVNS
Sbjct: 301 KDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAALEFMVNS 352

[Close]

BLAST of CSPI07G05440 vs. NCBI nr
Match: XP_011658783.1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucumis sativus] >KGN43707.1 hypothetical protein Csa_017115 [Cucumis sativus])

HSP 1 Score: 694.9 bits (1792), Expect = 3.6e-196
Identity = 351/352 (99.72%), Postives = 352/352 (100.00%), Query Frame = 0


Query: 1   MPRCRGLSIIAFSRGSLFGFIPLIRNVSPLSLLSIPTSFEQSSHGSWEHQASSCIVKSLN 60
           MPRCRGLSIIAFSRGSLFGFIPLIRNVSPLSLLSIPTSFEQSSHGSWEHQASSCIVKSLN
Sbjct: 1   MPRCRGLSIIAFSRGSLFGFIPLIRNVSPLSLLSIPTSFEQSSHGSWEHQASSCIVKSLN 60

Query: 61  ESMSRDCPPGFSFTRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTN 120
           ESMSRDCPPGFSFTRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTN
Sbjct: 61  ESMSRDCPPGFSFTRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTN 120

Query: 121 GSRLKQKVAKTKISKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKL 180
           GSRLKQKVAKTK+SKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKL
Sbjct: 121 GSRLKQKVAKTKMSKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKL 180

Query: 181 RKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHE 240
           RKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHE
Sbjct: 181 RKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHE 240

Query: 241 TVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLSK 300
           TVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLSK
Sbjct: 241 TVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLSK 300

Query: 301 DKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDAALESMVNS 353
           DKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDAALESMVNS
Sbjct: 301 DKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDAALESMVNS 352

[Close]

BLAST of CSPI07G05440 vs. NCBI nr
Match: XP_008455218.1 (PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucumis melo])

HSP 1 Score: 607.8 bits (1566), Expect = 5.8e-170
Identity = 317/345 (91.88%), Postives = 324/345 (93.91%), Query Frame = 0


Query: 1   MPRCRGLSIIAFSRGSLFGFIPLIRNVSPLSLLSIPTSFEQSSHGSWEHQASSCIVKSLN 60
           MPRCRG SII  SRGSLFGF  LIRN SPLSLLS+PTSF QSSHGS EHQASS IVKSLN
Sbjct: 1   MPRCRGQSIITISRGSLFGFTSLIRNASPLSLLSVPTSFGQSSHGSCEHQASSRIVKSLN 60

Query: 61  ESMSRDCPPGFSFTRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTN 120
           ES SRDCPPG S T RYSM ES GGFKRWQSVRHFSNAVVELKTD+NTVRFSFG PSSTN
Sbjct: 61  ESTSRDCPPGSSLTWRYSMWESYGGFKRWQSVRHFSNAVVELKTDSNTVRFSFG-PSSTN 120

Query: 121 GSRLKQ-KVAKTKISKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK 180
           GS+LKQ KVAKTK+SKK KLNELR YRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK
Sbjct: 121 GSQLKQKKVAKTKLSKKDKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK 180

Query: 181 LRKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKH 240
           LRKFEIPK  VEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKH
Sbjct: 181 LRKFEIPKSVVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKH 240

Query: 241 ETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLS 300
           ETVKVICKPCKPGQVHEYAEEL+RLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPP+TLS
Sbjct: 241 ETVKVICKPCKPGQVHEYAEELSRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLS 300

Query: 301 KDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDA 345
           KDKALEKY+YEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDA
Sbjct: 301 KDKALEKYRYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDA 344

[Close]

BLAST of CSPI07G05440 vs. NCBI nr
Match: KAA0031492.1 (putative CRM domain-containing protein [Cucumis melo var. makuwa] >TYK06945.1 putative CRM domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 586.6 bits (1511), Expect = 1.4e-163
Identity = 307/333 (92.19%), Postives = 314/333 (94.29%), Query Frame = 0


Query: 13  SRGSLFGFIPLIRNVSPLSLLSIPTSFEQSSHGSWEHQASSCIVKSLNESMSRDCPPGFS 72
           S GSLFGF  LIRN SPLSLLS+PTSF QSSHGS EHQASS IVKSLNES SRDCPPG S
Sbjct: 102 SGGSLFGFTSLIRNASPLSLLSVPTSFGQSSHGSCEHQASSRIVKSLNESTSRDCPPGSS 161

Query: 73  FTRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTNGSRLKQ-KVAKT 132
            T RYSM ES GGFKRWQSVRHFSNAVVELKTD+NTVRFSFG PSSTNGS+LKQ KVAKT
Sbjct: 162 LTWRYSMWESYGGFKRWQSVRHFSNAVVELKTDSNTVRFSFG-PSSTNGSQLKQKKVAKT 221

Query: 133 KISKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEIPKPFVE 192
           K+SKK KLNELR YRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEIPK  VE
Sbjct: 222 KLSKKDKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEIPKSVVE 281

Query: 193 KYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKP 252
           KYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKP
Sbjct: 282 KYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKP 341

Query: 253 GQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLSKDKALEKYKYEQ 312
           GQVHEYAEEL+RLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPP+TLSKDKALEKY+YEQ
Sbjct: 342 GQVHEYAEELSRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQ 401

Query: 313 SLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDA 345
           SLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDA
Sbjct: 402 SLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDA 433

[Close]

BLAST of CSPI07G05440 vs. NCBI nr
Match: XP_022967603.1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita maxima])

HSP 1 Score: 564.7 bits (1454), Expect = 5.6e-157
Identity = 296/353 (83.85%), Postives = 314/353 (88.95%), Query Frame = 0


Query: 1   MPRCRGLSIIAFSRGSLFGFIPLIRNVSPLSLLSIPTSFEQSSHGSWEHQASSCIVKSLN 60
           M R   LS IA SR SL+GFI LIRNVS LSL +IPTSF QSS+ S EHQ S+CI KSL 
Sbjct: 1   MSRGHALS-IAISRDSLYGFISLIRNVSRLSLFNIPTSFGQSSYESCEHQISNCISKSLQ 60

Query: 61  ESMSRDCPPGFSFTRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTN 120
           ES S   PPGF FT+RYSM ES GGF++WQSVRHFSN  VELKTD+N VRFSFG  SSTN
Sbjct: 61  ESTSIRYPPGFFFTKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTN 120

Query: 121 GSRLKQ-KVAKTKISKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK 180
           GS  KQ KVAK K+SKKAKLNELR YRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK
Sbjct: 121 GSPRKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK 180

Query: 181 LRKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKH 240
           LRKFE+PK  +E YDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMH+HWKKH
Sbjct: 181 LRKFEVPKSVLENYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKH 240

Query: 241 ETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLS 300
           ETVKVICKPCKPGQVHEYAEEL RLSKGIVIDIKPNNSI+FYRGKNYVQPEVMSPP+TLS
Sbjct: 241 ETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVQPEVMSPPDTLS 300

Query: 301 KDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDAALESMVNS 353
           KDKALEKYKYEQSLEHTSQF+EKLEKELEDF KHLAQFKR+KE+AA+E MVNS
Sbjct: 301 KDKALEKYKYEQSLEHTSQFVEKLEKELEDFHKHLAQFKRKKEEAAVEFMVNS 352

[Close]

BLAST of CSPI07G05440 vs. NCBI nr
Match: XP_038886903.1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 560.8 bits (1444), Expect = 8.1e-156
Identity = 293/347 (84.44%), Postives = 310/347 (89.34%), Query Frame = 0


Query: 1   MPRCRGLSIIAFSRGSLFGFIPLIRNVSPLSLLSIPTSFEQSSHGSWEHQASSCIVKSLN 60
           MP  R LS IA SR SLFG I LIRNV  LSLL+IPTSF QSS+GS EHQ SSC  KSL 
Sbjct: 1   MPLGRALS-IAISRDSLFGLISLIRNVPHLSLLNIPTSFGQSSYGSCEHQISSCTAKSLQ 60

Query: 61  ESMSRDCPPGFSFTRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTN 120
           ES S   PPGF F RRYSM ES GGFK+WQSVR+FSNA VELKTD++TVRFSFG  S+ N
Sbjct: 61  ESASIPYPPGFYFARRYSMCESFGGFKKWQSVRYFSNAAVELKTDSDTVRFSFGGSSNNN 120

Query: 121 GSRLKQKVAKTKISKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKL 180
           GS  KQKVAKTK+SKKAK+NELR YRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKL
Sbjct: 121 GSPRKQKVAKTKLSKKAKVNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKL 180

Query: 181 RKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHE 240
           RKFE+PK  VEKYDPE+LTEEEKHYLKR GEKKKNFVLLGRRGVFGGVVLNMH+HWKKHE
Sbjct: 181 RKFEVPKSVVEKYDPEVLTEEEKHYLKRIGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHE 240

Query: 241 TVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLSK 300
           TVKVICKPCKPGQVHE+AEEL RLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPP+TLSK
Sbjct: 241 TVKVICKPCKPGQVHEFAEELARLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSK 300

Query: 301 DKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDAALE 348
           DKALEK KYEQSLEHTSQFIEKLEKELEDFQKHLAQFKR+KE+AA +
Sbjct: 301 DKALEKSKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAAAD 346

[Close]

BLAST of CSPI07G05440 vs. TAIR 10
Match: AT4G13070.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 376.7 bits (966), Expect = 2.0e-104
Identity = 193/279 (69.18%), Postives = 235/279 (84.23%), Query Frame = 0


Query: 72  SFTRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTNG----SRLKQK 131
           S  +R+++    G F R    R+ SN+ +EL+TD+N VRF+F   SS+      +R ++K
Sbjct: 56  SQAQRWNLFAYDGLFSR----RYLSNSTIELRTDDNVVRFAFNNVSSSGNNVVPTRKEKK 115

Query: 132 VAKTKISKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEIPK 191
             + K+S+KAK+NELRFYRLKAKKK  SPNPEVRIRY LEKAKRKE WLIEKLRK+++PK
Sbjct: 116 WKRAKLSRKAKVNELRFYRLKAKKKMNSPNPEVRIRYKLEKAKRKEEWLIEKLRKYDVPK 175

Query: 192 PFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICK 251
              E YDPE LTEEE+HYLKRTGEK+KNFVL+GRRGVFGGVVLN+H+HWKKHETVKVICK
Sbjct: 176 SPAEPYDPESLTEEEQHYLKRTGEKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVKVICK 235

Query: 252 PC-KPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLSKDKALEK 311
           PC KPGQVHEYAEEL RLSKGIVID+KPNN+I+ YRGKNYV+PEVMSP +TLSKDKALEK
Sbjct: 236 PCNKPGQVHEYAEELARLSKGIVIDVKPNNTIVLYRGKNYVRPEVMSPVDTLSKDKALEK 295

Query: 312 YKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDAA 346
           Y+YEQSLEHTS+FIEKLEKELE++ K++A+ K++K++ A
Sbjct: 296 YRYEQSLEHTSEFIEKLEKELEEYHKYVARHKKKKDEEA 330

[Close]

BLAST of CSPI07G05440 vs. TAIR 10
Match: AT2G28480.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-54
Identity = 119/216 (55.09%), Postives = 154/216 (71.30%), Query Frame = 0


Query: 123 RLKQKVAKTKISKK-AKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLR 182
           RLK K  K +  +  A   + R   +K KKKK   N E RI+Y LEKAK KEA LIE+L+
Sbjct: 89  RLKLKRKKEREERNAANRKDPRRLTVKGKKKK-FVNAEERIKYKLEKAKIKEALLIERLK 148

Query: 183 KFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHET 242
           ++E+ K    +  P  +T EE+ YLK+ G+K+ N+V +GRRGVFGGV+LNMH+HWKKHET
Sbjct: 149 RYEVAKVQGPEVRPHEITGEERFYLKKMGQKRSNYVPIGRRGVFGGVILNMHLHWKKHET 208

Query: 243 VKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLSKD 302
           VKVIC   KPGQV +YAEEL +LS G+ ++I  +++IIFYRGK YVQP+VMSP +TLSK 
Sbjct: 209 VKVICNNSKPGQVQQYAEELAKLSGGVPVNIIGDDTIIFYRGKGYVQPQVMSPIDTLSKK 268

Query: 303 KALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQF 338
           +A EK KYEQSLE    FI   EKELE + +H+A +
Sbjct: 269 RAYEKSKYEQSLESVRHFIAIAEKELELYYRHVALY 303

[Close]

BLAST of CSPI07G05440 vs. TAIR 10
Match: AT3G25440.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 165.6 bits (418), Expect = 7.1e-41
Identity = 104/239 (43.51%), Postives = 147/239 (61.51%), Query Frame = 0


Query: 103 KTDNNTVRFSFGCPSSTNGSRLKQKVAKTKISKKAKLNELRFYRLKAKKKKTSPNPEVRI 162
           +T ++ +  S    S    S  K K  K K  K+A +  L+F+R K KK+      E +I
Sbjct: 83  ETGDDDISKSENSSSQDGDSCTKLKRKKLK-GKRAVVRWLKFFRWKKKKEFERMTSEEKI 142

Query: 163 RYSLEKAKRKEAWLIEKLRKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRR 222
              L KA++KE  L+E ++K E  +     +DPEILT EE  Y  + G K KN+V +GRR
Sbjct: 143 LNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRR 202

Query: 223 GVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYR 282
           G++ GV+LNMH+HWKKH+T++V+ K   P +V E A EL RL+ GIV+D+   N+II YR
Sbjct: 203 GIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYR 262

Query: 283 GKNYVQP--EVMSPPNTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKR 340
           GKNYVQP  E+MSP  TL + KAL+K K   +L    ++I +LE+EL+  Q   A+ KR
Sbjct: 263 GKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQ-AETKR 319

[Close]

BLAST of CSPI07G05440 vs. TAIR 10
Match: AT3G25440.2 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 165.6 bits (418), Expect = 7.1e-41
Identity = 104/239 (43.51%), Postives = 147/239 (61.51%), Query Frame = 0


Query: 103 KTDNNTVRFSFGCPSSTNGSRLKQKVAKTKISKKAKLNELRFYRLKAKKKKTSPNPEVRI 162
           +T ++ +  S    S    S  K K  K K  K+A +  L+F+R K KK+      E +I
Sbjct: 19  ETGDDDISKSENSSSQDGDSCTKLKRKKLK-GKRAVVRWLKFFRWKKKKEFERMTSEEKI 78

Query: 163 RYSLEKAKRKEAWLIEKLRKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRR 222
              L KA++KE  L+E ++K E  +     +DPEILT EE  Y  + G K KN+V +GRR
Sbjct: 79  LNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRR 138

Query: 223 GVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYR 282
           G++ GV+LNMH+HWKKH+T++V+ K   P +V E A EL RL+ GIV+D+   N+II YR
Sbjct: 139 GIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYR 198

Query: 283 GKNYVQP--EVMSPPNTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKR 340
           GKNYVQP  E+MSP  TL + KAL+K K   +L    ++I +LE+EL+  Q   A+ KR
Sbjct: 199 GKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQ-AETKR 255

[Close]

BLAST of CSPI07G05440 vs. TAIR 10
Match: AT3G27550.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 152.9 bits (385), Expect = 4.8e-37
Identity = 91/211 (43.13%), Postives = 132/211 (62.56%), Query Frame = 0


Query: 117 SSTNGSRLKQKVAKTKISKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWL 176
           S++ G  ++ KV      +  K   LR  R   K KK     E R+ Y+L++AK+K A L
Sbjct: 13  STSRGRSMRSKVESRMRKESGK--TLREIRRAKKLKKKLMTDEERLIYNLKRAKKKVALL 72

Query: 177 IEKLRKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHW 236
           ++KL+K+++P+     +DPE+ T E+    K+ G K KN+V +G RGVFGGVV NMHMHW
Sbjct: 73  LQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMHMHW 132

Query: 237 KKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPN 296
           K HETV+V C      ++ E A  + RLS G+VI+I    +II +RG+NY QP+ + P N
Sbjct: 133 KFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPKNLIPVN 192

Query: 297 TLSKDKALEKYKYEQSLEHTSQFIEKLEKEL 328
           TL+K KAL K ++EQ+LE     I+K E++L
Sbjct: 193 TLTKRKALFKARFEQALESQKLNIKKTEQQL 221

The following BLAST results are available for this feature:

BLAST of CSPI07G05440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67XL4	1.0e-39	43.51	Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabid...	[more]
Q9LT57	6.7e-36	43.13	CRM-domain containing factor CFM9, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q8L7C2	1.4e-20	31.86	CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q2R1U8	6.7e-20	34.55	CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa s...	[more]
F4J2U9	1.5e-19	38.38	CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis t...	[more]

BLAST of CSPI07G05440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5Y2	1.7e-196	99.72	CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G062730 PE=4 SV...	[more]
A0A1S3C151	2.8e-170	91.88	uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucumi...	[more]
A0A5A7SK96	6.7e-164	92.19	Putative CRM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1HVJ0	2.7e-157	83.85	uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurb...	[more]
A0A6J1HK68	5.7e-155	83.29	uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurb...	[more]

BLAST of CSPI07G05440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658783.1	3.6e-196	99.72	uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucumis ...	[more]
XP_008455218.1	5.8e-170	91.88	PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplasti...	[more]
KAA0031492.1	1.4e-163	92.19	putative CRM domain-containing protein [Cucumis melo var. makuwa] >TYK06945.1 pu...	[more]
XP_022967603.1	5.6e-157	83.85	uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbit...	[more]
XP_038886903.1	8.1e-156	84.44	uncharacterized CRM domain-containing protein At3g25440, chloroplastic isoform X...	[more]

BLAST of CSPI07G05440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13070.1	2.0e-104	69.18	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT2G28480.1	1.1e-54	55.09	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G25440.1	7.1e-41	43.51	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G25440.2	7.1e-41	43.51	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G27550.1	4.8e-37	43.13	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 313..347
None	No IPR available	PANTHER	PTHR31426:SF3	OS06G0304500 PROTEIN	coord: 79..349
IPR001890	RNA-binding, CRM domain	SMART	SM01103	CRS1_YhbY_2	coord: 198..282 e-value: 2.0E-20 score: 83.8
IPR001890	RNA-binding, CRM domain	PFAM	PF01985	CRS1_YhbY	coord: 198..282 e-value: 1.6E-18 score: 66.6
IPR001890	RNA-binding, CRM domain	PROSITE	PS51295	CRM	coord: 196..293 score: 19.355875
IPR035920	YhbY-like superfamily	GENE3D	3.30.110.60		coord: 197..294 e-value: 1.0E-21 score: 78.8
IPR035920	YhbY-like superfamily	SUPERFAMILY	75471	YhbY-like	coord: 197..292
IPR040286	CRM domain-containing protein At3g25440-like	PANTHER	PTHR31426	GROUP II INTRON SPLICING FACTOR CRS1-LIKE	coord: 79..349

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G05440.1	CSPI07G05440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding