CSPI06G22260 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G22260
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein RETICULATA-RELATED 1, chloroplastic
Location	Chr6: 20132346 .. 20141026 (+)
RNA-Seq Expression	CSPI06G22260
Synteny	CSPI06G22260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTATTGAAGATAGTGTTCTTCGTCCCTTCCGCAGGCGGCTATCCTTAATCCATTAAAACCCCTTTCTCCACCAACTTTGCTCTTTCTTTTTCTCTCTCTCTGATTTCCCTATTTCTTAGAGAGATTGAGAACCAGAGAATTCGGAATCCGTAATCCGTAATCTTCTTCTTTCTTCTTCCCTGTTTCAATCTCGATGACCATATAGACAACACACGGGATTCAATTCAACCTCATCCATAGCCGAATATGTCTCATGCGGTGTTTCAAACGGCTCAAATCATGCCCATTAACACCCAGCTTACCACCAACAACCTATGGCTGCCCGCGGTTGTTAAACTCGGTCCCTCCTATCGAAACAGAGCAGTTTTGGTGGTCAAGGCTTTCACAGCTTCTCCTCCTTCTTCCTCTTCTTCGGGTGTTTCTTATGGGGATTCCATTTCTTTTCTGGAGCGTTGCTTTGAAACCTCATTTCCGCCTGCTGGGGTTGACCCTTCTCTTGCCGTATCTTCTTCCTCTTTTGGCCCTGTTATGAAGGGCAAATATGGTGCCTTTGGTGCTGTAACTTTGGAGAAATCCAAGCTTGATTTGTCTCAGAAGCAGTCCAAGTCCAGCCCTGAGGTAAGTTACTTCAGTTTTGCTTTCCTTCACTTGGATTGTGCCTATGCTTTGGTATTGCATGGATTCTTCTAGTCGTGAAATGTTCCATAGTTGGAAAAGCAGATTTATTTATTTATTATTATTATTATTTTTGGCAATATGAACTTTGGTTTTAGCTCCCTTTCTATGAGAGAAATAGCATTTTAACTTGGAAGTTTTTGTTCCTTGTATTTCTGGCAATTGATTCGGGACGTTTTCCTATCTCAGCCAACTGTTAAACATTTCATTTCAATTGAAATACAGGTCTTCCAAACTTGGTTTTCTATTTCTGTCTGAGAGGCAGTGCTTCTTGTTAAATTTTTTAATCCTATCTTAATTCTTATGGATAGTTGAACAGTAAGTGTCCTAAGTTAGATGTGTAGAACCACTGCCAATCCATTTCCTTTCTTTTTTGAACGAGGGTTTATTAGATCACCGTTAATAAAAATGAGTCCACTTCTCAATAGGTCAGAAATGGATTTGCTAAATACTGATTACTGAATCATATTTCTTGGAGAGAGTTGCAGGACTATCACGAGTAAGCCCAATGGTTATTGGAGGTGTGAAAAGAAAGAAAAAGAAGAGGTAAAGAGCTTAAGAGAGAATGAGTTTGAACTAGTTACCTGCTTAATTCGATGACAAACACATAAAAAGGTTAAACTATTGCCTTATGAGATTAATCGGGTGAGTGTATCTTGGGCACTCACGTATATTATTAAAAAAGATTACAGTCCACTTCTCATGCTTATTTGGTGGACTTAATGAAAACAAGCAAATTTGAAATTGTTTCAAGTTGATGACTTGTACTCTTGTCCAGTTGCCCCCCCTCCCCCCAACCCAGCCCCTTCATGGCAACCATCCTCTTCCCTTTGCTTCACCTTGATGGAGCAGAATTGCTCACAATGCTCCATCACAATTGGTGTTGGATCCTTCTCAATCTTGGTGGTGACGGTTAATAAAGGTAGTCATGCTACTGTACAAAGTTCGAAGAAAATTCTTTTTGCTTCGTCCCTGTAAGCTGAATCTTTCTTGACTGGCTTCTGAAATTCAGCGTTAGAATGTCTGTTAGATTTGCCTCCCACCACCCTTGAACTTTCCAAGGAACATAAAGGTGAAGACTTGTTATTTAGGAAGTAAAGTTTTCAAATGAAGGAGGTTTTTTTATGGAGATGACAAAGTTTTGATGACAATGGTGGAAAAAGAAAAATCATTGACATTTTTGGAGATGGCACGATAGGTGGTTGGCCATCCTTATTGTCTCTGACTCTAAATTTTCTAGAAAAAAAGTAAGTGCACCATACTCAAGGATACAGTTGTAGCAAGGCCAATCCTTTCATCCTTCTCATAAAGATCAATTGTTGAAAGGTACTATTGGCCTCCTTTTCTCGTCTATGATATCCTTATTTTTTTCTTTTTTTAAAAATGGTATTAATGTTTAATGGCCTAGAGATCTTTGTAGAACACATAATTCCTTCCCATCTGCATATACAGTCCTACGATGGACTGTGCATGTGTCTAAGTGAGACGATGAGGCACTGTTGAGTGTGCCATTGAACTAAATGAACATTTCTCCTCTTCCAAATCCCCCACATTGAAAGCATGGGAAGAGCAATCCGTTTCCATTTAAAGAGAACACATCCATGATTTTGAGGAAAGTCCTTCCAACAAAAAGATCCCTGCTAATAATTTTATTTTACTGGTAGTGGTAACTTATTTTTGTTTAGATTTTTGTGGGGACGGAGAGTTAGGGAGGGACACTCAATGAAACAGATTCGGGCCAATTTATAGTCTGGAAATAAAAATATTCAACCATTTGTCCAGCTTGGATATGGCATTTTCAACTGATGGGTTCCAAAAGGATGGGTCTCAAGGTCTTCTTCAAGAGAGAAACCAAGATACTTGAAGAGAAAAGATTCTGCCTTTCATTCAAACCTCTCTGCTTGCTTTCAACAGATACAAATAGGAGACCGAAAATTCTCTTTTGACCCATATATCTTTATGACCATTGAATACATCTCAAAACAATTTCCTATTATTTCTTTCTAACCAAAGTTGCCAAGAAAATCCCCAAATAGTCTCACATCTCTTTATGACCCTGACAAACTTCCAGAACAATCTGTTATTCCTTCTGACTGAAGTTGTCAATAAAAAATCCTAATGGAGCCACATCTCTATATGACGCCTAAAAGCACCTTGAAACATCTTTATTTTTTTAAACCATAGTTATCAAGAAAAAACCACAACTGACTTATACCTCTTTATGACACCTACAGGCATCCTGATACATGTATCCTTTGTATGCTAAGAAGTTTCTTCCGAATATGAAGATGAAGGATCATCGCATACTGTGACAGTATAAAATGTGTTCACCTGAACTACATATAGGAACAATTCAGAAACATCTGATTGACATTGCCAGAGAATTCTCTATGAACCAACTCCCCAATCTCAACCTGAAGAACACAAGGGTCCTAGCTTGTATTTATCATGTGTATCCATTTACAACAAAAAAGGTTCTATGGGAAGAGGGAAACACAGCCTAAAAGCCTAGAAATGAAGGTTCCCTTTCCTTAAATAGGAATCAGAAAAAGCCCACCCAAAGAGGGACACATTTTATATTTTTAGGATACAGTGATCCTTCCCTCTTCATATTGGGTGAAAACAGCTTTTCAGGTTGCAAATGGCCTTCTATCCTATGGTAAGCCTCATTTTGAATCTCAGAGGCTTCTAGCTTGAAAGAACTCTTAGGTAGACTCACTTTTCTCCAAGCAACCCTTGCCGAGTAAGGTGTGCAATCTTTGGAAAAGCTTTTTTCTAAATTTTACTATGGGAAGGAAACGATGACAGCATTAGCTTCCACCCTTTCAAATGGGACAATGTCATGCTTCCAATCAAAGCTAGAAGTGTTGGGATTTGTAACTGATTAACAAGAACAAGCCTCCTCTTGCAAAATGGAATTAACGCTTCCTGAATGAGAATAGAATCTTATAAAAGAAAGTCATCAAGGCTTAGTATGGCCGTACTTGCTTATCTTCATCTCTGGGCTCATCATCCTATAGATCCTTTTAGGGGTCTGTGGATTTCTATTATGAGGCATAAGAAGCTGATATTTCATTGACTTCCCTGTAATGTTAGGGAGGGGCACATACCTCTTTTTGTAGTTTTGTTTGGTCAAAGGGCTCCTCCAGCATAAAGCTTCTGTTGGCTTTTTTATTTGACATTAAAAAGGTTTGCACTTGTTAAATACTTTTGGGTGGTGGATTCTAACATTTTGAATTTGCATCTTAGAAGGAATCTCAATGATATTAAATAAAAAAGAATGGACCTCTCTTATACATCTTTTATCCTTCTTGCAACAAACACAAGGCAGTGACAGAATCTTGTGGAAGCTGTGCAATCAAATGGAGATTTTTATCACAGAGCACCAATTATCGAACATTCAAATGGCTATGTTGTGTTTGAAAGATTAAGTTTTTTATTTTTTCCTAAGGTGGTAAGCTTCTATTATATAAGCTCCAACACAAGATGCCTTACATGTGTAGAAACAGCTCAGAGTCTCAAATTCACCTCACCTCTTTGTATCATGCAATTATGCATACAAGTTCTTAAGTGCGGCTCTTATCTAGTTTTGGTTGACCTGTAAAAGGTCAGATGCATTGGATTAGAGCCCTTTTCTGTTTTGAGTTGGCTCCTTTTTGGGTTTTGGTTGCGTATCCCTCTAGTATTTGTTCCCTCTGTCTGATTGGAACTTGGAATTATGGTTTCTCATTACACACAAACAAAGGAAAAATGATTCTAGCCAAGAATTGTCGACTGAAATGTTTTGAGAGTCTTTGTAGTTAAATATACTGATGTTGCTATTTTTATTTCTATTTTTGCACCTCACCCTCCACTTTAGAGCACTATTGCTCTCTATTATGTTTTGTCCTTTTGTTTTCTGCTTATCAAAAGAAAAAAAAATATGTCCTTTGTTTTTTGTTGTCTAGTTATGTTTTTGGTTAGTGGAATTAAGCATGTCTTCTATGTTGTTGGTTGTGTTATTTCATTTTCCCAATTCCAAGTGTTTCAAGCTGAAATAATATCATAACAAATTGCAGCTTGCAATTGGGGGAGGTGGCGGAGATATTGGCAAGAAAATCAATCATGGTGGTGGTGACGGTGGAGACGATGATGGTGATGATGATGATTACTATGATGAGTTTGATGATGGAGACGAGGGAGATGAGGGTGGCTTGTTCCGGAGAAGGAAATTTCTTGAAGAGGTATACAATCTATTACTGACAGATCCGTGTTGCTATTGTTTTTTATGGGCTCATTTTTAGCACTAACTTCGTATTTGCTCTAGCTTTTTGATCGTAAATTTGTAGATGCAGTATTAAACGAGTGGCAGAAGACAATGATGGATTTGCCTGCTGGATTTCGTCAGGCTTATGAAATGGTAGTGTTTTGATTTTCTTATTACTGTGATTATGGGTGGCCATTCAAACTGCAAAACGGAACCATTTCTTAAAACCAAACCGAACCGAATACTCAATGAAACTGAAAATTTTTGTTCGGCTCGGTTTAAAGAAATTTGAAACCGAATTGAAACTAAACTGATTTGTTTTTAACTAATATATATTTATCTTTATATTTTTATATTTAAAAAAAGTAGAATTGAATTAAAACCGAACCACTTTTAATTTAAAGAACAAAACCTAATTTAAAACCGTACCAAACCAAATTATTTTTTAAAATGTTTTAAAATTACCAAAACCAAATTTGGATCGAACCGAACCGCATAAATACGGTTCAGTTTGGTTTGAACCAATAAATCGGTTCGGTTCTGTTTTGTGCCAAACCGATTCGTTTCCACCTCTAAGTGTGATATTTTCTTGTAGGAGTCAGGAAATATTTTATCATTTTTCTTTTGTGCTAAATATTTAGCCTTGAACTTTGATTAGATGCTGACAAATTATTTATCCCAGGGTTTAGTTAGCTCGGCTCAAATGGTAAGATTCTTAGCAGTGAATGCCAGGCCAACTACAACTCGGTTCATTTCACGATCACTTCCTCAAGGAATCTCACGGGCTTTTATTGGCAGGTGAATTTTTAAAAAATTCTCTGGTAGAGATTACGAGGCCTTTAATTCTTAAGTAATTCACTTCAATTCTTTTACCAATTCACCATTCTTAGAGAGGTGACATGGGAACTCGCTTACTAGAAGATATTAATTCTCCATTAAGCATCAACATCTTAATATTAGATCCTAAACCTGAATTTAAGCAATTAGATATTGTAATGTCTAATTCTAAATTACCATGAATTCTACTGGATTCTTAAGCTTTCTGACATTACATTTTAGGGATGGTTGCATATATGACAAAATGAGCCAAATTAATAGCCAAAATAACTTAACTTAAAACTATTTGCAAATATTACAAAATCTAAGTGAAAATTCTCAATACACAATTTCAATCCAAATCACTCATACACAAATTTAGCCCAGATCGATTCATTTCGAACTATTTGCACGTTTTATTTTTTTTCTTAAGTTTTCCTTGATGTTTTTGTCCTTATAGTGTCATTTTTGGTCCATTTAAATAACTTGAACCGTTTTTATTAGTTTCATTTTTTTCTTTAAGTCATTTTTCTTCTATGCATGTTTTATATGACTGACTTGGACCATGAAGGAAGTCTATAAAGTGATTGACAAACTCTTATCACCAATTGAAATCCATTGTTGATAGGAGTCTATTGTTTATTGAATCCTATCATGAAACTTGTGTCACTGTCTAGAATTATGATCACATAGAATTGCCATCTCAAACCCCTTTTCACCTTCCAATTCTCAGTCCTGGGGTCATCTCCTTTGGAAACTTACGGTTTCTTTTCTGCCAAATTTTCTGAAGTAGACATGCGTATGCGTATTTTATATTATAGCAACATATGTATGATAATATTTCTCTATCGATATCTTGCATGTGGAGTGGACCAACAGCTTCATTATACCAACATATGTATGATAATATTTCTGTATCGATATCTTGCATGTGGAAGTGGACCAACGGCTTCACTAGCTTCCTCCTCCCCGTCCTTTTTTTGAGGAAGTAAATTTCAAAACGATAAAATGAACAGTTCAATTTCTTTCATGGTTCCGTACTTGAATTTTTCTTGTACTGATCAGTAGTTTGTTTGAGCGAAAAACTGCATGCACACTTCGAAAAAGAAATATATATTTTCGAACTTTAACATATTGTATAATTGCACAGGATGTTAGCAGATCCTTCCTTTCTCTATAAACTTCTTTTAGAGCAAGCTGCTACAATTGGTTGCTCGGCTTGGTGGGAAATAAAGAATCGCAAGGACAGGTTTGTTATTTAGGCATATGGTTAAACTTTATTTCATTTTCTTAATTTATCTTTTATTTGATTGGCTTACAAATTTGTTGTTTTGTTGTGGTTGCAGGATAAAACAGGAATGGGATCTGGCGCTCATTAATGTTCTCACTGTTACCGCTTGCAATGCTATAGTTGTTTGGTCACTTGCTCCTTGTCGTTCATATGGAAATACATTCCGATTTGATTTGCAAAATACATTACAGAAGCTTCCCAATAATATATTTGAAAAAAGTTATCCTATGAGGGAATTTGACCTACAAAAGAGAATCCATTCCTTCTTCTACAAAGCTGCAGAGTTGTGCATGGTCGGTATAACTGCAGGAGCAGCTCAAGGTGTTTTGTCCAATTTTCTCTCTAGTAAAAAGCAGGAAAGGTAATAGACCACTCCCATTTGGCAAATAGAAGTGCTAATTAAGTTCCCATTTTTTCTTCACTCGGAGTTGCGTATGTGTTTGACAGGTTATCTGTATCAGTTCCAACTGTGAGTACCAATGCTCTCGGGTATGGTGCTTTTCTTGGTCTATATGCAAATCTCCGGTATCAGTTATTATGCGGTTTTGACAGAGCAATGATCAATCATTTTGATGTTATTGGAGTCGCTCTGTTTTTAAGCTCTGCAATGAGGTTCGAACTGATTTTCCCCTAATGAAATATTTTTGGCATTTATTTGTAAAGTCTTAAACATGCCATTTTTTCCCCTTTAAAGTCTCTGGTTTAAACACAATCTTATCCAAAAAGACATTGTTGGGCAAATAATATTTCATAAAACCATATTGGAATTGTATGTAGGGTTTTGAATGTGCAACTAGGAGAAAGATCAAGATTGGCTTGGCTTGGAATAGAGGCAGATCCATTGGTTCAGTCAAGGGAACTCTTGGAGAAGGTTTACAACCGACCTTCTCAAGGCGTTAGTCAATCTTCCTCGAAATGGTTTATTTCAAAGAATGCCATCATTTCTGGCCTTGGACTCCTCGGTCTCAAACAGTCCGGTGTTGATTCCGTCTCTGAAGGTGAATCAGTACCCAAAGCACGGAGGAAGCGAATTGTTCGGAGAAAGGTAACGGCAGGTTCGTCATGATCTTTTATCCAGTTAGTGCATTCTTCAGTACCCCCAGTTTTGCAGTATGACTATAGATTTGGTGCAAAGTTGCCGTATAAATCTTTGATAAAAGTTAGTTGATAGGTGGATAATATTCTGTCCTTTGATGTAATCTTGTGATCCAACTGGAGAAATTCATTTAAAGCTGAATTCATGCAATTATTATTAAATTTCCCTTTTAGGGATTTTCTTTTCATTCTTCTGGTTGGTGTTTTCCACCATGTTGATTGAACATTTGAAATACCCTTCTTCTGGTATTATCTCTTTAATGAATAAGGTTACCAAAGTAGTGTTGGTATGAAACTAGAGTTATATTCATTTCCCCATTAGAAAAGTTGCAAAAATCCTACCTTCCAATGTGGAACTTCAAGGGTGTAAGTGGGTTGGGTTGGGTTGGGTTGTTTTTCCTTACAACTGACCCGACCCATGTTTGGTTCTGTACGGACAATACCTGACCTGATCGGGTTGGGTCTGGTCGGGTCAAACCCGATGTTTACCATTTAAAATTCAGAAATAAAAAAGAAAAAGAAAAAGAAAAAGAAAAACCAACAACTTAAAGAAGAG

mRNA sequence

CTCTATTGAAGATAGTGTTCTTCGTCCCTTCCGCAGGCGGCTATCCTTAATCCATTAAAACCCCTTTCTCCACCAACTTTGCTCTTTCTTTTTCTCTCTCTCTGATTTCCCTATTTCTTAGAGAGATTGAGAACCAGAGAATTCGGAATCCGTAATCCGTAATCTTCTTCTTTCTTCTTCCCTGTTTCAATCTCGATGACCATATAGACAACACACGGGATTCAATTCAACCTCATCCATAGCCGAATATGTCTCATGCGGTGTTTCAAACGGCTCAAATCATGCCCATTAACACCCAGCTTACCACCAACAACCTATGGCTGCCCGCGGTTGTTAAACTCGGTCCCTCCTATCGAAACAGAGCAGTTTTGGTGGTCAAGGCTTTCACAGCTTCTCCTCCTTCTTCCTCTTCTTCGGGTGTTTCTTATGGGGATTCCATTTCTTTTCTGGAGCGTTGCTTTGAAACCTCATTTCCGCCTGCTGGGGTTGACCCTTCTCTTGCCGTATCTTCTTCCTCTTTTGGCCCTGTTATGAAGGGCAAATATGGTGCCTTTGGTGCTGTAACTTTGGAGAAATCCAAGCTTGATTTGTCTCAGAAGCAGTCCAAGTCCAGCCCTGAGCTTGCAATTGGGGGAGGTGGCGGAGATATTGGCAAGAAAATCAATCATGGTGGTGGTGACGGTGGAGACGATGATGGTGATGATGATGATTACTATGATGAGTTTGATGATGGAGACGAGGGAGATGAGGGTGGCTTGTTCCGGAGAAGGAAATTTCTTGAAGAGCTTTTTGATCGTAAATTTGTAGATGCAGTATTAAACGAGTGGCAGAAGACAATGATGGATTTGCCTGCTGGATTTCGTCAGGCTTATGAAATGGGTTTAGTTAGCTCGGCTCAAATGGTAAGATTCTTAGCAGTGAATGCCAGGCCAACTACAACTCGGTTCATTTCACGATCACTTCCTCAAGGAATCTCACGGGCTTTTATTGGCAGGATGTTAGCAGATCCTTCCTTTCTCTATAAACTTCTTTTAGAGCAAGCTGCTACAATTGGTTGCTCGGCTTGGTGGGAAATAAAGAATCGCAAGGACAGGATAAAACAGGAATGGGATCTGGCGCTCATTAATGTTCTCACTGTTACCGCTTGCAATGCTATAGTTGTTTGGTCACTTGCTCCTTGTCGTTCATATGGAAATACATTCCGATTTGATTTGCAAAATACATTACAGAAGCTTCCCAATAATATATTTGAAAAAAGTTATCCTATGAGGGAATTTGACCTACAAAAGAGAATCCATTCCTTCTTCTACAAAGCTGCAGAGTTGTGCATGGTCGGTATAACTGCAGGAGCAGCTCAAGGTGTTTTGTCCAATTTTCTCTCTAGTAAAAAGCAGGAAAGGTTATCTGTATCAGTTCCAACTGTGAGTACCAATGCTCTCGGGTATGGTGCTTTTCTTGGTCTATATGCAAATCTCCGGTATCAGTTATTATGCGGTTTTGACAGAGCAATGATCAATCATTTTGATGTTATTGGAGTCGCTCTGTTTTTAAGCTCTGCAATGAGGGTTTTGAATGTGCAACTAGGAGAAAGATCAAGATTGGCTTGGCTTGGAATAGAGGCAGATCCATTGGTTCAGTCAAGGGAACTCTTGGAGAAGGTTTACAACCGACCTTCTCAAGGCGTTAGTCAATCTTCCTCGAAATGGTTTATTTCAAAGAATGCCATCATTTCTGGCCTTGGACTCCTCGGTCTCAAACAGTCCGGTGTTGATTCCGTCTCTGAAGGTGAATCAGTACCCAAAGCACGGAGGAAGCGAATTGTTCGGAGAAAGGTAACGGCAGGTTCGTCATGATCTTTTATCCAGTTAGTGCATTCTTCAGTACCCCCAGTTTTGCAGTATGACTATAGATTTGGTGCAAAGTTGCCGTATAAATCTTTGATAAAAGTTAGTTGATAGGTGGATAATATTCTGTCCTTTGATGTAATCTTGTGATCCAACTGGAGAAATTCATTTAAAGCTGAATTCATGCAATTATTATTAAATTTCCCTTTTAGGGATTTTCTTTTCATTCTTCTGGTTGGTGTTTTCCACCATGTTGATTGAACATTTGAAATACCCTTCTTCTGGTATTATCTCTTTAATGAATAAGGTTACCAAAGTAGTGTTGGTATGAAACTAGAGTTATATTCATTTCCCCATTAGAAAAGTTGCAAAAATCCTACCTTCCAATGTGGAACTTCAAGGGTGTAAGTGGGTTGGGTTGGGTTGGGTTGTTTTTCCTTACAACTGACCCGACCCATGTTTGGTTCTGTACGGACAATACCTGACCTGATCGGGTTGGGTCTGGTCGGGTCAAACCCGATGTTTACCATTTAAAATTCAGAAATAAAAAAGAAAAAGAAAAAGAAAAAGAAAAACCAACAACTTAAAGAAGAG

Coding sequence (CDS)

ATGTCTCATGCGGTGTTTCAAACGGCTCAAATCATGCCCATTAACACCCAGCTTACCACCAACAACCTATGGCTGCCCGCGGTTGTTAAACTCGGTCCCTCCTATCGAAACAGAGCAGTTTTGGTGGTCAAGGCTTTCACAGCTTCTCCTCCTTCTTCCTCTTCTTCGGGTGTTTCTTATGGGGATTCCATTTCTTTTCTGGAGCGTTGCTTTGAAACCTCATTTCCGCCTGCTGGGGTTGACCCTTCTCTTGCCGTATCTTCTTCCTCTTTTGGCCCTGTTATGAAGGGCAAATATGGTGCCTTTGGTGCTGTAACTTTGGAGAAATCCAAGCTTGATTTGTCTCAGAAGCAGTCCAAGTCCAGCCCTGAGCTTGCAATTGGGGGAGGTGGCGGAGATATTGGCAAGAAAATCAATCATGGTGGTGGTGACGGTGGAGACGATGATGGTGATGATGATGATTACTATGATGAGTTTGATGATGGAGACGAGGGAGATGAGGGTGGCTTGTTCCGGAGAAGGAAATTTCTTGAAGAGCTTTTTGATCGTAAATTTGTAGATGCAGTATTAAACGAGTGGCAGAAGACAATGATGGATTTGCCTGCTGGATTTCGTCAGGCTTATGAAATGGGTTTAGTTAGCTCGGCTCAAATGGTAAGATTCTTAGCAGTGAATGCCAGGCCAACTACAACTCGGTTCATTTCACGATCACTTCCTCAAGGAATCTCACGGGCTTTTATTGGCAGGATGTTAGCAGATCCTTCCTTTCTCTATAAACTTCTTTTAGAGCAAGCTGCTACAATTGGTTGCTCGGCTTGGTGGGAAATAAAGAATCGCAAGGACAGGATAAAACAGGAATGGGATCTGGCGCTCATTAATGTTCTCACTGTTACCGCTTGCAATGCTATAGTTGTTTGGTCACTTGCTCCTTGTCGTTCATATGGAAATACATTCCGATTTGATTTGCAAAATACATTACAGAAGCTTCCCAATAATATATTTGAAAAAAGTTATCCTATGAGGGAATTTGACCTACAAAAGAGAATCCATTCCTTCTTCTACAAAGCTGCAGAGTTGTGCATGGTCGGTATAACTGCAGGAGCAGCTCAAGGTGTTTTGTCCAATTTTCTCTCTAGTAAAAAGCAGGAAAGGTTATCTGTATCAGTTCCAACTGTGAGTACCAATGCTCTCGGGTATGGTGCTTTTCTTGGTCTATATGCAAATCTCCGGTATCAGTTATTATGCGGTTTTGACAGAGCAATGATCAATCATTTTGATGTTATTGGAGTCGCTCTGTTTTTAAGCTCTGCAATGAGGGTTTTGAATGTGCAACTAGGAGAAAGATCAAGATTGGCTTGGCTTGGAATAGAGGCAGATCCATTGGTTCAGTCAAGGGAACTCTTGGAGAAGGTTTACAACCGACCTTCTCAAGGCGTTAGTCAATCTTCCTCGAAATGGTTTATTTCAAAGAATGCCATCATTTCTGGCCTTGGACTCCTCGGTCTCAAACAGTCCGGTGTTGATTCCGTCTCTGAAGGTGAATCAGTACCCAAAGCACGGAGGAAGCGAATTGTTCGGAGAAAGGTAACGGCAGGTTCGTCATGA

Protein sequence

MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS*

Homology

[Close]

BLAST of CSPI06G22260 vs. ExPASy Swiss-Prot
Match: Q9FGP9 (Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER1 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 6.0e-20
Identity = 96/313 (30.67%), Postives = 153/313 (48.88%), Query Frame = 0


Query: 119 SKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLE 178
           S   PEL  G GG + G   N GGG+GG+ DG       E DDG+  DE      ++F  
Sbjct: 92  SDLEPELDDGDGGDENGN--NDGGGNGGNGDGGGGGGDGEGDDGE--DEADKAEEKEFGP 151

Query: 179 ELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSL 238
            L   KF + V+ E ++  + LP    +A +   +    ++R+L +        F+ RS 
Sbjct: 152 IL---KF-EEVMKETERRGITLPEDMLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLMRSC 211

Query: 239 PQGISRAFIGRMLADPSFLYKLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVT 298
                     RMLADPSFL+K+  E A    C+ + E++ R +    E++L   ++L   
Sbjct: 212 AM-----LRNRMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGL 271

Query: 299 ACNAIVVWSLAPCRSYG-----NTFRF-DLQNTLQKLPNNIFEKSYPMREFDLQKRIHSF 358
             +  +V  LAP    G     +T  F DL+     LP+++FE   P  +F + +RI +F
Sbjct: 272 VVDVALVGLLAPYARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATF 331

Query: 359 FYKAAELCMVGITAG-AAQGVLSNFLSSKKQERLS---VSVPTVSTNALGYGAFLGLYAN 418
           FYK      VG   G   QG+ +  +++K+  + S   V +P +  +A  +G FLGL +N
Sbjct: 332 FYKGLLYGSVGFGCGLIGQGIANLIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSN 391

Query: 419 LRYQLLCGFDRAM 422
            RYQ++ G +R +
Sbjct: 392 ARYQIINGLERVV 391

[Close]

BLAST of CSPI06G22260 vs. ExPASy Swiss-Prot
Match: Q8RWG3 (Protein RETICULATA-RELATED 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER6 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 4.7e-17
Identity = 72/251 (28.69%), Postives = 112/251 (44.62%), Query Frame = 0


Query: 181 FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240
           FDR  +  V+N   +    LP   +   ++GLVS   +     +   P  +    R    
Sbjct: 418 FDRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQR---- 477

Query: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTAC 300
              + F  R+LADP FL +L +E+A +I  +   + + RK+   +E D  + + +  +  
Sbjct: 478 --FQGFRERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVV 537

Query: 301 NAIVVWSLAPCRSY--------GNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSF 360
           +   VW  AP  S+        G      L+  L  +P+N F+KS   RE++L  RI S 
Sbjct: 538 DFFTVWLPAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASV 597

Query: 361 FYKAAELCMVGITAGAAQGVLSNFLSSK----KQERLSVSVPTVS---TNALGYGAFLGL 417
                +L  VG+ +  A    SN L+      K E +    P  S     A+ YG FLG 
Sbjct: 598 IVGGLKLAGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGT 657

[Close]

BLAST of CSPI06G22260 vs. ExPASy Swiss-Prot
Match: Q9SIY5 (Protein RETICULATA-RELATED 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER5 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.8e-16
Identity = 84/337 (24.93%), Postives = 152/337 (45.10%), Query Frame = 0


Query: 181 FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240
           FDR  +  V+N   +    LP   ++  ++GLVS   +  F  +   P  +    R    
Sbjct: 409 FDRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQR---- 468

Query: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTAC 300
              + F  R+LADP FL +L +E+A +I  +   + + RK+   +E D  + + +  +  
Sbjct: 469 --FQGFRERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVV 528

Query: 301 NAIVVWSLAPCRSY--------GNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSF 360
           +   VW  AP  S+        G      L+  L  +P+N F+KS   +E+ L  RI S 
Sbjct: 529 DFFTVWLPAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASV 588

Query: 361 FYKAAELCMVGITAG-AAQGVLSNFLSSKKQERLSVSV-------PTVSTNALGYGAFLG 420
                +L  VG+ +  AA G  +   + +K  +  + V       P + T AL YG +LG
Sbjct: 589 IIGGLKLAGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKT-ALVYGGYLG 648

Query: 421 LYANLRYQLLCGFDRAMINHFDVIG----VALFLSSAMRVLNVQLGERSRLAWLGIEADP 480
             +N+RYQ++ G     I+  D +     +   +S  +RV N   G +    W+ +    
Sbjct: 649 TSSNIRYQIIAGLIEHRIS--DELSSQPLLVNMISFVVRVANSYFGTQQ---WIDLARST 708

Query: 481 LVQSRELLEKVYNRPSQGVSQSSSKWFISKNAIISGL 498
            +Q+++ +    N+  +  SQS+ ++  ++ A +  L
Sbjct: 709 GLQTQKSV-TTSNQIPEVASQSTVEYSTTEEASMDDL 732

[Close]

BLAST of CSPI06G22260 vs. ExPASy Swiss-Prot
Match: B9DFK5 (Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.2e-14
Identity = 79/303 (26.07%), Postives = 137/303 (45.21%), Query Frame = 0


Query: 128 GGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVD 187
           G GGG        GGG+GG+ DG+ +DY       +E + G + +              +
Sbjct: 120 GNGGGG-------GGGNGGEGDGEGEDY-------EEKEFGPILK-------------FE 179

Query: 188 AVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQGISRAFI 247
            V+ E +     LP+   +A +   +    ++R+L + +      F  RS          
Sbjct: 180 EVMKETEARGATLPSDMLEAAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAM-----LR 239

Query: 248 GRMLADPSFLYKLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWS 307
            RMLADPSFL+K+  E      C+   E++ R      E++L + ++L  T  N  +V  
Sbjct: 240 NRMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGM 299

Query: 308 LAPCRSYGNT-----FRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELCMV 367
           LAP   +G       F   +      LP+++FE   P   F  Q+R+ ++FYK      V
Sbjct: 300 LAPYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAV 359

Query: 368 GITAG-AAQGVLSNFLSSKK---QERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFD 422
           G   G   QG+ +  +++K+   +   ++ VP +  +A  +G FL + +N RYQ++ G +
Sbjct: 360 GFGCGIVGQGIANLIMTAKRNINKSEENIPVPPLIKSAALWGVFLSVSSNTRYQIINGLE 390

[Close]

BLAST of CSPI06G22260 vs. ExPASy TrEMBL
Match: A0A0A0KDZ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411290 PE=3 SV=1)

HSP 1 Score: 1033.5 bits (2671), Expect = 3.1e-298
Identity = 533/534 (99.81%), Postives = 534/534 (100.00%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSY 60
           MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSY
Sbjct: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSY 60

Query: 61  GDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSK 120
           GDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSK
Sbjct: 61  GDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSK 120

Query: 121 SSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEEL 180
           SSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEEL
Sbjct: 121 SSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEEL 180

Query: 181 FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240
           FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ
Sbjct: 181 FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240

Query: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTAC 300
           GISRAFIGRMLADPSFLYKLLLEQAATIGC+AWWEIKNRKDRIKQEWDLALINVLTVTAC
Sbjct: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTAC 300

Query: 301 NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC 360
           NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC
Sbjct: 301 NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC 360

Query: 361 MVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRA 420
           MVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRA
Sbjct: 361 MVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRA 420

Query: 421 MINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVS 480
           MINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVS
Sbjct: 421 MINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVS 480

Query: 481 QSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 535
           QSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS
Sbjct: 481 QSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 534

[Close]

BLAST of CSPI06G22260 vs. ExPASy TrEMBL
Match: A0A1S3BMX1 (protein RETICULATA-RELATED 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491309 PE=3 SV=1)

HSP 1 Score: 983.8 bits (2542), Expect = 2.9e-283
Identity = 507/537 (94.41%), Postives = 521/537 (97.02%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTA---SPPSSSSSG 60
           MSHAVFQTAQIMPINTQLTTN LWLP+VVKLGPSYRNRAVLVVKAFT    S PSSSSSG
Sbjct: 1   MSHAVFQTAQIMPINTQLTTNKLWLPSVVKLGPSYRNRAVLVVKAFTTSSPSSPSSSSSG 60

Query: 61  VSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQK 120
           V YGDSI+FLERCFET   PAG DP LA+SSSSFGPVMKG++GA G+VTLEKSKLDLSQK
Sbjct: 61  VPYGDSIAFLERCFETPSAPAGSDPFLAISSSSFGPVMKGQFGALGSVTLEKSKLDLSQK 120

Query: 121 QSKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFL 180
           QSKSSPE AIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFL
Sbjct: 121 QSKSSPETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFL 180

Query: 181 EELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRS 240
           EELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISR+
Sbjct: 181 EELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRA 240

Query: 241 LPQGISRAFIGRMLADPSFLYKLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTV 300
           LPQGISRAFIGRMLADP+FLY+LLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTV
Sbjct: 241 LPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTV 300

Query: 301 TACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAA 360
           TACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAA
Sbjct: 301 TACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAA 360

Query: 361 ELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGF 420
           ELC+VGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGF
Sbjct: 361 ELCLVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGF 420

Query: 421 DRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQ 480
           DRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELL+KVYNRPS+
Sbjct: 421 DRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLQKVYNRPSE 480

Query: 481 GVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 535
            ++QSSSKWFISKNAIISGLGLLGLKQSG DSVSEGESVPKARRKRIVRRKVTAGSS
Sbjct: 481 DINQSSSKWFISKNAIISGLGLLGLKQSGADSVSEGESVPKARRKRIVRRKVTAGSS 537

[Close]

BLAST of CSPI06G22260 vs. ExPASy TrEMBL
Match: A0A6J1DN85 (protein RETICULATA-RELATED 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111022154 PE=3 SV=1)

HSP 1 Score: 915.6 bits (2365), Expect = 9.6e-263
Identity = 475/539 (88.13%), Postives = 502/539 (93.14%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWL---PAVVKLGPSY--RNRAVLVVKAFTASPPSSSS 60
           M+HAVFQTAQIMPINTQL T  LWL   P +VKLGPS   R++ VLVVKAFT S PSSSS
Sbjct: 1   MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSPSSSS 60

Query: 61  SGVSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLS 120
           S VS GDSI+ LERCF     PA      A SSSS GPVMKG+YG+ G+VTLEKSKLDLS
Sbjct: 61  SAVSDGDSIALLERCFVAPSAPA------ATSSSSLGPVMKGQYGSLGSVTLEKSKLDLS 120

Query: 121 QKQSKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRK 180
           QKQSKSSPE AIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRK
Sbjct: 121 QKQSKSSPETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRK 180

Query: 181 FLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFIS 240
           FLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMV+FLA+NARPTTTRFIS
Sbjct: 181 FLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFIS 240

Query: 241 RSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVL 300
           RSLPQGISRAFIGRMLADP+FLY+LLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVL
Sbjct: 241 RSLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVL 300

Query: 301 TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYK 360
           TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYP+REFDLQKRIHSFFYK
Sbjct: 301 TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPLREFDLQKRIHSFFYK 360

Query: 361 AAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLC 420
           AAELCMVGITAGAAQG LSNFLS KK+ERLSVSVPTVSTNALGYGAFLGLYANLRYQLLC
Sbjct: 361 AAELCMVGITAGAAQGALSNFLSRKKEERLSVSVPTVSTNALGYGAFLGLYANLRYQLLC 420

Query: 421 GFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRP 480
           GFDRAMI+HFDVIGVALF SSA+RVLNVQLGERSRLAWLG+EADPLVQS +LL++VYNRP
Sbjct: 421 GFDRAMISHFDVIGVALFFSSALRVLNVQLGERSRLAWLGVEADPLVQSSDLLKQVYNRP 480

Query: 481 SQGVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 535
           S+GV++ SSKWFISKNAIISGLGLLG+KQ+G DSVSEGES+PKARRKRIVR+KVTAGSS
Sbjct: 481 SEGVNEPSSKWFISKNAIISGLGLLGVKQTGADSVSEGESIPKARRKRIVRKKVTAGSS 533

[Close]

BLAST of CSPI06G22260 vs. ExPASy TrEMBL
Match: A0A6J1JKL8 (protein RETICULATA-RELATED 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486651 PE=3 SV=1)

HSP 1 Score: 904.4 bits (2336), Expect = 2.2e-259
Identity = 470/539 (87.20%), Postives = 499/539 (92.58%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTA-SPP---SSSSS 60
           MSHAVFQTAQIMPI+TQL T  LWLP  VKLG   R R VLVVKA T  SPP   SSSSS
Sbjct: 1   MSHAVFQTAQIMPIHTQLPTTKLWLPPPVKLGSCQRTRTVLVVKAVTTFSPPPSHSSSSS 60

Query: 61  GVSYGDSISFLERCFETSFPPAGVDPSL-AVSSSSFGPVMKGKYGAFGAVTLEKSKLDLS 120
             S G+SI+ LERCF     PAG D SL A SSSS GPVMKGKYGA GAVTLEKSKLD+S
Sbjct: 61  DDSDGNSIALLERCFAAPSSPAGSDSSLTATSSSSSGPVMKGKYGALGAVTLEKSKLDMS 120

Query: 121 QKQSKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRK 180
           QKQ++SSPE AIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRR+
Sbjct: 121 QKQTRSSPETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRQ 180

Query: 181 FLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFIS 240
           FLEELFDRKFVDAVLNEWQKT+MDLPAGFRQAYEMGLVSSAQMV+FLA+NARPTTTRFIS
Sbjct: 181 FLEELFDRKFVDAVLNEWQKTIMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFIS 240

Query: 241 RSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVL 300
           R+LPQGISR+FIGRMLADP+FLY+LLLEQAATIGC+AWWEIKNRKDRIKQEWDLALINVL
Sbjct: 241 RTLPQGISRSFIGRMLADPAFLYRLLLEQAATIGCTAWWEIKNRKDRIKQEWDLALINVL 300

Query: 301 TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYK 360
           TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNN+FEKSYPMREFDLQKRIHSFFYK
Sbjct: 301 TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNLFEKSYPMREFDLQKRIHSFFYK 360

Query: 361 AAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLC 420
           AAELCMVGITAGAAQG LSNFL+ KK++RLSVSVPTVSTNALGYGAFLGLYANLRYQLLC
Sbjct: 361 AAELCMVGITAGAAQGALSNFLAKKKKDRLSVSVPTVSTNALGYGAFLGLYANLRYQLLC 420

Query: 421 GFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRP 480
           GFDRAMINHFDVIGVALF SSA+RVLNVQLGERSRLAWLG+EADPLVQS +LL+KVYNR 
Sbjct: 421 GFDRAMINHFDVIGVALFFSSALRVLNVQLGERSRLAWLGVEADPLVQSSDLLQKVYNRR 480

Query: 481 SQGVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 535
           S+ V++SSSKWFISKNAI SGLGLLGLKQ+G DSVSEGES+PKARRKRIVR+KVTAGSS
Sbjct: 481 SEDVNRSSSKWFISKNAITSGLGLLGLKQTGADSVSEGESIPKARRKRIVRKKVTAGSS 539

[Close]

BLAST of CSPI06G22260 vs. ExPASy TrEMBL
Match: A0A6J1EHU7 (protein RETICULATA-RELATED 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434492 PE=3 SV=1)

HSP 1 Score: 901.0 bits (2327), Expect = 2.4e-258
Identity = 468/539 (86.83%), Postives = 498/539 (92.39%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTA-SPP---SSSSS 60
           MSHAVFQTAQIMPI+TQL T  LWLP  VKLG   R R VLVVKA T  SPP   SSSSS
Sbjct: 1   MSHAVFQTAQIMPIHTQLPTTKLWLPPPVKLGSCQRTRTVLVVKAVTTFSPPPSHSSSSS 60

Query: 61  GVSYGDSISFLERCFETSFPPAGVDPSL-AVSSSSFGPVMKGKYGAFGAVTLEKSKLDLS 120
             S G+SI+ LERCF     PAG D SL A SSSS GPVMKGKYGA GAVTLEKSKLD+S
Sbjct: 61  DDSDGNSIALLERCFAAPSSPAGSDSSLTATSSSSSGPVMKGKYGALGAVTLEKSKLDMS 120

Query: 121 QKQSKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRK 180
           QKQ++SSPE AIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRR+
Sbjct: 121 QKQTRSSPETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRQ 180

Query: 181 FLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFIS 240
            LEELFDRKFVDAVLNEWQKT+MDLPAGFRQAYEMGLVSSAQMV+FLA+NARPTTTRFIS
Sbjct: 181 LLEELFDRKFVDAVLNEWQKTIMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFIS 240

Query: 241 RSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVL 300
           R+LPQGISR+FIGRMLADP+FLY+LLLEQAATIGC+AWWEIKNRKDRIKQEWDLALINVL
Sbjct: 241 RTLPQGISRSFIGRMLADPAFLYRLLLEQAATIGCTAWWEIKNRKDRIKQEWDLALINVL 300

Query: 301 TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYK 360
           TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNN+FEKSYPMREFDLQKRIHSFFYK
Sbjct: 301 TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNLFEKSYPMREFDLQKRIHSFFYK 360

Query: 361 AAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLC 420
           AAELCMVGITAGAAQG LSNFL+ KK++RLSVSVPT+STNALGYGAFLGLYANLRYQLLC
Sbjct: 361 AAELCMVGITAGAAQGALSNFLAKKKKDRLSVSVPTLSTNALGYGAFLGLYANLRYQLLC 420

Query: 421 GFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRP 480
           GFDRAMINHFDVIGVALF SSA+RVLNVQLGERSRLAWLG+EADPLVQS +LL+KVYNR 
Sbjct: 421 GFDRAMINHFDVIGVALFFSSALRVLNVQLGERSRLAWLGVEADPLVQSSDLLQKVYNRR 480

Query: 481 SQGVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 535
           S+ V++SSSKWFISKNAI SGLGLLGLKQ+G DSVSEGES+PKARRKRIVR+KVTAGSS
Sbjct: 481 SEDVNRSSSKWFISKNAITSGLGLLGLKQTGADSVSEGESIPKARRKRIVRKKVTAGSS 539

[Close]

BLAST of CSPI06G22260 vs. NCBI nr
Match: XP_004140107.1 (protein RETICULATA-RELATED 1, chloroplastic [Cucumis sativus] >KGN47925.1 hypothetical protein Csa_003414 [Cucumis sativus])

HSP 1 Score: 1033.5 bits (2671), Expect = 6.5e-298
Identity = 533/534 (99.81%), Postives = 534/534 (100.00%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSY 60
           MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSY
Sbjct: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSY 60

Query: 61  GDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSK 120
           GDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSK
Sbjct: 61  GDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSK 120

Query: 121 SSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEEL 180
           SSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEEL
Sbjct: 121 SSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEEL 180

Query: 181 FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240
           FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ
Sbjct: 181 FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240

Query: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTAC 300
           GISRAFIGRMLADPSFLYKLLLEQAATIGC+AWWEIKNRKDRIKQEWDLALINVLTVTAC
Sbjct: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTAC 300

Query: 301 NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC 360
           NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC
Sbjct: 301 NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC 360

Query: 361 MVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRA 420
           MVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRA
Sbjct: 361 MVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRA 420

Query: 421 MINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVS 480
           MINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVS
Sbjct: 421 MINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVS 480

Query: 481 QSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 535
           QSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS
Sbjct: 481 QSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 534

[Close]

BLAST of CSPI06G22260 vs. NCBI nr
Match: XP_008449416.1 (PREDICTED: protein RETICULATA-RELATED 1, chloroplastic [Cucumis melo])

HSP 1 Score: 983.8 bits (2542), Expect = 5.9e-283
Identity = 507/537 (94.41%), Postives = 521/537 (97.02%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTA---SPPSSSSSG 60
           MSHAVFQTAQIMPINTQLTTN LWLP+VVKLGPSYRNRAVLVVKAFT    S PSSSSSG
Sbjct: 1   MSHAVFQTAQIMPINTQLTTNKLWLPSVVKLGPSYRNRAVLVVKAFTTSSPSSPSSSSSG 60

Query: 61  VSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQK 120
           V YGDSI+FLERCFET   PAG DP LA+SSSSFGPVMKG++GA G+VTLEKSKLDLSQK
Sbjct: 61  VPYGDSIAFLERCFETPSAPAGSDPFLAISSSSFGPVMKGQFGALGSVTLEKSKLDLSQK 120

Query: 121 QSKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFL 180
           QSKSSPE AIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFL
Sbjct: 121 QSKSSPETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFL 180

Query: 181 EELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRS 240
           EELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISR+
Sbjct: 181 EELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRA 240

Query: 241 LPQGISRAFIGRMLADPSFLYKLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTV 300
           LPQGISRAFIGRMLADP+FLY+LLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTV
Sbjct: 241 LPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTV 300

Query: 301 TACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAA 360
           TACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAA
Sbjct: 301 TACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAA 360

Query: 361 ELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGF 420
           ELC+VGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGF
Sbjct: 361 ELCLVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGF 420

Query: 421 DRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQ 480
           DRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELL+KVYNRPS+
Sbjct: 421 DRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLQKVYNRPSE 480

Query: 481 GVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 535
            ++QSSSKWFISKNAIISGLGLLGLKQSG DSVSEGESVPKARRKRIVRRKVTAGSS
Sbjct: 481 DINQSSSKWFISKNAIISGLGLLGLKQSGADSVSEGESVPKARRKRIVRRKVTAGSS 537

[Close]

BLAST of CSPI06G22260 vs. NCBI nr
Match: XP_038888281.1 (protein RETICULATA-RELATED 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 953.0 bits (2462), Expect = 1.1e-273
Identity = 489/537 (91.06%), Postives = 510/537 (94.97%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPP---SSSSSG 60
           MSHAVFQTAQIMPINTQL TN LWLP+ VKLGP +RNRAVLVVKAFT SPP   SSSSSG
Sbjct: 1   MSHAVFQTAQIMPINTQLPTNKLWLPSAVKLGPCHRNRAVLVVKAFTTSPPSSSSSSSSG 60

Query: 61  VSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQK 120
           VSY DSI+ LERCF     PAG DP +A+SSSSFGPVMKG+YGA G+VTLEKSKLDLSQK
Sbjct: 61  VSYVDSIALLERCFGAPSAPAGCDPLIAISSSSFGPVMKGQYGALGSVTLEKSKLDLSQK 120

Query: 121 QSKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFL 180
           QSKSSPE AIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFL
Sbjct: 121 QSKSSPETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFL 180

Query: 181 EELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRS 240
           EELFDRKFVDAVLNEWQKTMMDLPAG RQAYEMGLVSSAQMV+FL++NARPTTTRFISR+
Sbjct: 181 EELFDRKFVDAVLNEWQKTMMDLPAGLRQAYEMGLVSSAQMVKFLSMNARPTTTRFISRA 240

Query: 241 LPQGISRAFIGRMLADPSFLYKLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTV 300
           LPQGISRAFIGRM+ADP+FLY+LLLEQA TIGCSAWWEIKNRKDRIKQEWDLALINVLTV
Sbjct: 241 LPQGISRAFIGRMIADPAFLYRLLLEQATTIGCSAWWEIKNRKDRIKQEWDLALINVLTV 300

Query: 301 TACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAA 360
           TACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAA
Sbjct: 301 TACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAA 360

Query: 361 ELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGF 420
           ELCMVGITAGAAQG LSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGF
Sbjct: 361 ELCMVGITAGAAQGALSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGF 420

Query: 421 DRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQ 480
           DRAMINHFDVI VALF SSA+RVLNVQLGERSRLAWLG+EADPLVQS ELL+KVYNRPS+
Sbjct: 421 DRAMINHFDVIEVALFFSSALRVLNVQLGERSRLAWLGVEADPLVQSSELLKKVYNRPSE 480

Query: 481 GVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 535
            VS+SSSKWFISKNAIISGLGLLGLKQ+G DS+SEGESVPKARRKRIVRRKVTAGSS
Sbjct: 481 DVSKSSSKWFISKNAIISGLGLLGLKQTGADSISEGESVPKARRKRIVRRKVTAGSS 537

[Close]

BLAST of CSPI06G22260 vs. NCBI nr
Match: XP_022155012.1 (protein RETICULATA-RELATED 1, chloroplastic [Momordica charantia])

HSP 1 Score: 915.6 bits (2365), Expect = 2.0e-262
Identity = 475/539 (88.13%), Postives = 502/539 (93.14%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWL---PAVVKLGPSY--RNRAVLVVKAFTASPPSSSS 60
           M+HAVFQTAQIMPINTQL T  LWL   P +VKLGPS   R++ VLVVKAFT S PSSSS
Sbjct: 1   MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSPSSSS 60

Query: 61  SGVSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLS 120
           S VS GDSI+ LERCF     PA      A SSSS GPVMKG+YG+ G+VTLEKSKLDLS
Sbjct: 61  SAVSDGDSIALLERCFVAPSAPA------ATSSSSLGPVMKGQYGSLGSVTLEKSKLDLS 120

Query: 121 QKQSKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRK 180
           QKQSKSSPE AIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRK
Sbjct: 121 QKQSKSSPETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRK 180

Query: 181 FLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFIS 240
           FLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMV+FLA+NARPTTTRFIS
Sbjct: 181 FLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFIS 240

Query: 241 RSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVL 300
           RSLPQGISRAFIGRMLADP+FLY+LLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVL
Sbjct: 241 RSLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVL 300

Query: 301 TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYK 360
           TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYP+REFDLQKRIHSFFYK
Sbjct: 301 TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPLREFDLQKRIHSFFYK 360

Query: 361 AAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLC 420
           AAELCMVGITAGAAQG LSNFLS KK+ERLSVSVPTVSTNALGYGAFLGLYANLRYQLLC
Sbjct: 361 AAELCMVGITAGAAQGALSNFLSRKKEERLSVSVPTVSTNALGYGAFLGLYANLRYQLLC 420

Query: 421 GFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRP 480
           GFDRAMI+HFDVIGVALF SSA+RVLNVQLGERSRLAWLG+EADPLVQS +LL++VYNRP
Sbjct: 421 GFDRAMISHFDVIGVALFFSSALRVLNVQLGERSRLAWLGVEADPLVQSSDLLKQVYNRP 480

Query: 481 SQGVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 535
           S+GV++ SSKWFISKNAIISGLGLLG+KQ+G DSVSEGES+PKARRKRIVR+KVTAGSS
Sbjct: 481 SEGVNEPSSKWFISKNAIISGLGLLGVKQTGADSVSEGESIPKARRKRIVRKKVTAGSS 533

[Close]

BLAST of CSPI06G22260 vs. NCBI nr
Match: XP_023529366.1 (protein RETICULATA-RELATED 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 907.1 bits (2343), Expect = 7.0e-260
Identity = 471/539 (87.38%), Postives = 501/539 (92.95%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTA-SPP---SSSSS 60
           MSHAVFQTAQIMPI+TQL T  LW+P  VKLG S R R VLVVKA T  SPP   SSSSS
Sbjct: 1   MSHAVFQTAQIMPIHTQLPTTKLWMPLPVKLGSSQRTRTVLVVKAVTTFSPPPSHSSSSS 60

Query: 61  GVSYGDSISFLERCFETSFPPAGVDPSLAV-SSSSFGPVMKGKYGAFGAVTLEKSKLDLS 120
             S G+SI+ LERCF     PAG D SLAV SSSS GPVMKGKYGA GAVTLEKSKLD+S
Sbjct: 61  DDSDGNSIALLERCFAAPSSPAGSDSSLAVTSSSSSGPVMKGKYGALGAVTLEKSKLDMS 120

Query: 121 QKQSKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRK 180
           QKQ++SSPE AIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRR+
Sbjct: 121 QKQTRSSPETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRQ 180

Query: 181 FLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFIS 240
           FLEELFDRKFVDAVLNEWQKT+MDLPAGFRQAYEMGLVSSAQMV+FLA+NARPTTTRFIS
Sbjct: 181 FLEELFDRKFVDAVLNEWQKTIMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFIS 240

Query: 241 RSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVL 300
           R+LPQGISR+FIGRMLADP+FLY+LLLEQAATIGC+AWWEIKNRKDRIKQEWDLALINVL
Sbjct: 241 RTLPQGISRSFIGRMLADPAFLYRLLLEQAATIGCTAWWEIKNRKDRIKQEWDLALINVL 300

Query: 301 TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYK 360
           TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNN+FEKSYPMREFDLQKRIHSFFYK
Sbjct: 301 TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNLFEKSYPMREFDLQKRIHSFFYK 360

Query: 361 AAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLC 420
           AAELCMVGITAGAAQG LSNFL+ KK++RLSVSVPTVSTNALGYGAFLGLYANLRYQLLC
Sbjct: 361 AAELCMVGITAGAAQGALSNFLAKKKKDRLSVSVPTVSTNALGYGAFLGLYANLRYQLLC 420

Query: 421 GFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRP 480
           GFDRAMINHFDVIGVALF SSA+RVLNVQLGERSRLAWLG+EADPLVQS +LL+KVYNR 
Sbjct: 421 GFDRAMINHFDVIGVALFFSSALRVLNVQLGERSRLAWLGVEADPLVQSSDLLQKVYNRR 480

Query: 481 SQGVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 535
           S+ V++SSSKWFISKNAI SGLGLLGLKQ+G DSVSEGES+PKARRKRIVR+KVTAGSS
Sbjct: 481 SEDVNRSSSKWFISKNAITSGLGLLGLKQTGADSVSEGESIPKARRKRIVRKKVTAGSS 539

[Close]

BLAST of CSPI06G22260 vs. TAIR 10
Match: AT5G24690.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 690.3 bits (1780), Expect = 1.3e-198
Identity = 356/489 (72.80%), Postives = 416/489 (85.07%), Query Frame = 0


Query: 53  SSSSGVSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFG------PVMKGKYGAFGAVT 112
           +SSS     DS+S LERC +    P+GV+   + SS SF       PVMKGK+G+ GAVT
Sbjct: 42  ASSSSFLVDDSVSGLERCLQL---PSGVELGTS-SSGSFSASTQMCPVMKGKFGSVGAVT 101

Query: 113 LEKSKLDLSQKQSKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGD 172
           LEK KLD++QK S++SPE+A GGGGG+IGK IN+GGGDGGDD+GDDDDY+DEFDDGDEGD
Sbjct: 102 LEKGKLDMTQKISETSPEIATGGGGGNIGKSINNGGGDGGDDNGDDDDYFDEFDDGDEGD 161

Query: 173 EGGLFRRRKFLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNA 232
           + GLFRRR FL E+FDRKFVDAVLNEWQKTMMDLPAG RQAYEMGLVSSAQMV+FLA+NA
Sbjct: 162 DDGLFRRRMFLAEIFDRKFVDAVLNEWQKTMMDLPAGLRQAYEMGLVSSAQMVKFLAINA 221

Query: 233 RPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCSAWWEIKNRKDRIKQE 292
           RPTTTR ISR+LPQG+SRAF+GRMLADP+FLYKLLLEQAAT+GCS WWE+KNRK+R+K+E
Sbjct: 222 RPTTTRMISRALPQGLSRAFVGRMLADPAFLYKLLLEQAATVGCSVWWEVKNRKNRLKEE 281

Query: 293 WDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQ 352
           WDLALINVLTV+ACNA  VW LAPCRSYGNTFRFDLQNTLQKLPNN+FE SYP+REFDLQ
Sbjct: 282 WDLALINVLTVSACNAAAVWLLAPCRSYGNTFRFDLQNTLQKLPNNLFEMSYPLREFDLQ 341

Query: 353 KRIHSFFYKAAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLY 412
           KR HS FYKAAEL ++G+ AG  QG LSN L+ KK+ R+SV+VP++STNALGYGAFLG+Y
Sbjct: 342 KRFHSLFYKAAELSILGLAAGTLQGSLSNVLAGKKKNRVSVTVPSISTNALGYGAFLGIY 401

Query: 413 ANLRYQLLCGFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRE 472
           ANLRYQLLCGF+R + +HFDVIGVALF  +A+R++NVQLGE+SR  WLG+EADPL QS +
Sbjct: 402 ANLRYQLLCGFERGVSSHFDVIGVALFFGTALRIMNVQLGEKSRQVWLGVEADPLAQSDD 461

Query: 473 LLEKVYNRPS-QGVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIV 532
           LL K YNRPS + V++ SSKWFISKNAI+S  GLLG KQ   DSVS+    PKARRKRIV
Sbjct: 462 LLAKAYNRPSEEAVAKPSSKWFISKNAIVS--GLLGKKQE--DSVSDSPP-PKARRKRIV 521

Query: 533 RRKVTAGSS 535
           R+KV A +S
Sbjct: 522 RKKVAASAS 521

[Close]

BLAST of CSPI06G22260 vs. TAIR 10
Match: AT5G22790.1 (reticulata-related 1 )

HSP 1 Score: 100.5 bits (249), Expect = 4.3e-21
Identity = 96/313 (30.67%), Postives = 153/313 (48.88%), Query Frame = 0


Query: 119 SKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLE 178
           S   PEL  G GG + G   N GGG+GG+ DG       E DDG+  DE      ++F  
Sbjct: 92  SDLEPELDDGDGGDENGN--NDGGGNGGNGDGGGGGGDGEGDDGE--DEADKAEEKEFGP 151

Query: 179 ELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSL 238
            L   KF + V+ E ++  + LP    +A +   +    ++R+L +        F+ RS 
Sbjct: 152 IL---KF-EEVMKETERRGITLPEDMLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLMRSC 211

Query: 239 PQGISRAFIGRMLADPSFLYKLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVT 298
                     RMLADPSFL+K+  E A    C+ + E++ R +    E++L   ++L   
Sbjct: 212 AM-----LRNRMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGL 271

Query: 299 ACNAIVVWSLAPCRSYG-----NTFRF-DLQNTLQKLPNNIFEKSYPMREFDLQKRIHSF 358
             +  +V  LAP    G     +T  F DL+     LP+++FE   P  +F + +RI +F
Sbjct: 272 VVDVALVGLLAPYARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATF 331

Query: 359 FYKAAELCMVGITAG-AAQGVLSNFLSSKKQERLS---VSVPTVSTNALGYGAFLGLYAN 418
           FYK      VG   G   QG+ +  +++K+  + S   V +P +  +A  +G FLGL +N
Sbjct: 332 FYKGLLYGSVGFGCGLIGQGIANLIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSN 391

Query: 419 LRYQLLCGFDRAM 422
            RYQ++ G +R +
Sbjct: 392 ARYQIINGLERVV 391

[Close]

BLAST of CSPI06G22260 vs. TAIR 10
Match: AT3G56140.1 (Protein of unknown function (DUF399 and DUF3411) )

HSP 1 Score: 90.9 bits (224), Expect = 3.4e-18
Identity = 72/251 (28.69%), Postives = 112/251 (44.62%), Query Frame = 0


Query: 181 FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240
           FDR  +  V+N   +    LP   +   ++GLVS   +     +   P  +    R    
Sbjct: 418 FDRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQR---- 477

Query: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTAC 300
              + F  R+LADP FL +L +E+A +I  +   + + RK+   +E D  + + +  +  
Sbjct: 478 --FQGFRERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVV 537

Query: 301 NAIVVWSLAPCRSY--------GNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSF 360
           +   VW  AP  S+        G      L+  L  +P+N F+KS   RE++L  RI S 
Sbjct: 538 DFFTVWLPAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASV 597

Query: 361 FYKAAELCMVGITAGAAQGVLSNFLSSK----KQERLSVSVPTVS---TNALGYGAFLGL 417
                +L  VG+ +  A    SN L+      K E +    P  S     A+ YG FLG 
Sbjct: 598 IVGGLKLAGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGT 657

[Close]

BLAST of CSPI06G22260 vs. TAIR 10
Match: AT2G40400.1 (Protein of unknown function (DUF399 and DUF3411) )

HSP 1 Score: 89.0 bits (219), Expect = 1.3e-17
Identity = 84/337 (24.93%), Postives = 152/337 (45.10%), Query Frame = 0


Query: 181 FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240
           FDR  +  V+N   +    LP   ++  ++GLVS   +  F  +   P  +    R    
Sbjct: 409 FDRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQR---- 468

Query: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTAC 300
              + F  R+LADP FL +L +E+A +I  +   + + RK+   +E D  + + +  +  
Sbjct: 469 --FQGFRERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVV 528

Query: 301 NAIVVWSLAPCRSY--------GNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSF 360
           +   VW  AP  S+        G      L+  L  +P+N F+KS   +E+ L  RI S 
Sbjct: 529 DFFTVWLPAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASV 588

Query: 361 FYKAAELCMVGITAG-AAQGVLSNFLSSKKQERLSVSV-------PTVSTNALGYGAFLG 420
                +L  VG+ +  AA G  +   + +K  +  + V       P + T AL YG +LG
Sbjct: 589 IIGGLKLAGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKT-ALVYGGYLG 648

Query: 421 LYANLRYQLLCGFDRAMINHFDVIG----VALFLSSAMRVLNVQLGERSRLAWLGIEADP 480
             +N+RYQ++ G     I+  D +     +   +S  +RV N   G +    W+ +    
Sbjct: 649 TSSNIRYQIIAGLIEHRIS--DELSSQPLLVNMISFVVRVANSYFGTQQ---WIDLARST 708

Query: 481 LVQSRELLEKVYNRPSQGVSQSSSKWFISKNAIISGL 498
            +Q+++ +    N+  +  SQS+ ++  ++ A +  L
Sbjct: 709 GLQTQKSV-TTSNQIPEVASQSTVEYSTTEEASMDDL 732

[Close]

BLAST of CSPI06G22260 vs. TAIR 10
Match: AT2G40400.2 (Protein of unknown function (DUF399 and DUF3411) )

HSP 1 Score: 89.0 bits (219), Expect = 1.3e-17
Identity = 84/337 (24.93%), Postives = 152/337 (45.10%), Query Frame = 0


Query: 181 FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240
           FDR  +  V+N   +    LP   ++  ++GLVS   +  F  +   P  +    R    
Sbjct: 409 FDRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQR---- 468

Query: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTAC 300
              + F  R+LADP FL +L +E+A +I  +   + + RK+   +E D  + + +  +  
Sbjct: 469 --FQGFRERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVV 528

Query: 301 NAIVVWSLAPCRSY--------GNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSF 360
           +   VW  AP  S+        G      L+  L  +P+N F+KS   +E+ L  RI S 
Sbjct: 529 DFFTVWLPAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASV 588

Query: 361 FYKAAELCMVGITAG-AAQGVLSNFLSSKKQERLSVSV-------PTVSTNALGYGAFLG 420
                +L  VG+ +  AA G  +   + +K  +  + V       P + T AL YG +LG
Sbjct: 589 IIGGLKLAGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKT-ALVYGGYLG 648

Query: 421 LYANLRYQLLCGFDRAMINHFDVIG----VALFLSSAMRVLNVQLGERSRLAWLGIEADP 480
             +N+RYQ++ G     I+  D +     +   +S  +RV N   G +    W+ +    
Sbjct: 649 TSSNIRYQIIAGLIEHRIS--DELSSQPLLVNMISFVVRVANSYFGTQQ---WIDLARST 708

Query: 481 LVQSRELLEKVYNRPSQGVSQSSSKWFISKNAIISGL 498
            +Q+++ +    N+  +  SQS+ ++  ++ A +  L
Sbjct: 709 GLQTQKSV-TTSNQIPEVASQSTVEYSTTEEASMDDL 732

The following BLAST results are available for this feature:

BLAST of CSPI06G22260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGP9	6.0e-20	30.67	Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q8RWG3	4.7e-17	28.69	Protein RETICULATA-RELATED 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9SIY5	1.8e-16	24.93	Protein RETICULATA-RELATED 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
B9DFK5	2.2e-14	26.07	Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=...	[more]

BLAST of CSPI06G22260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDZ4	3.1e-298	99.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411290 PE=3 SV=1	[more]
A0A1S3BMX1	2.9e-283	94.41	protein RETICULATA-RELATED 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491...	[more]
A0A6J1DN85	9.6e-263	88.13	protein RETICULATA-RELATED 1, chloroplastic OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1JKL8	2.2e-259	87.20	protein RETICULATA-RELATED 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1EHU7	2.4e-258	86.83	protein RETICULATA-RELATED 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of CSPI06G22260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140107.1	6.5e-298	99.81	protein RETICULATA-RELATED 1, chloroplastic [Cucumis sativus] >KGN47925.1 hypoth...	[more]
XP_008449416.1	5.9e-283	94.41	PREDICTED: protein RETICULATA-RELATED 1, chloroplastic [Cucumis melo]	[more]
XP_038888281.1	1.1e-273	91.06	protein RETICULATA-RELATED 1, chloroplastic [Benincasa hispida]	[more]
XP_022155012.1	2.0e-262	88.13	protein RETICULATA-RELATED 1, chloroplastic [Momordica charantia]	[more]
XP_023529366.1	7.0e-260	87.38	protein RETICULATA-RELATED 1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI06G22260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24690.1	1.3e-198	72.80	Protein of unknown function (DUF3411)	[more]
AT5G22790.1	4.3e-21	30.67	reticulata-related 1	[more]
AT3G56140.1	3.4e-18	28.69	Protein of unknown function (DUF399 and DUF3411)	[more]
AT2G40400.1	1.3e-17	24.93	Protein of unknown function (DUF399 and DUF3411)	[more]
AT2G40400.2	1.3e-17	24.93	Protein of unknown function (DUF399 and DUF3411)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021825	Protein RETICULATA-related	PFAM	PF11891	RETICULATA-like	coord: 248..417 e-value: 4.5E-62 score: 209.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..163
None	No IPR available	PANTHER	PTHR31038	EXPRESSED PROTEIN-RELATED	coord: 24..440
None	No IPR available	PANTHER	PTHR31038:SF2	PROTEIN RETICULATA-RELATED 1, CHLOROPLASTIC-LIKE	coord: 24..440

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G22260.1	CSPI06G22260.1	mRNA
CSPI06G22260.2	CSPI06G22260.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0099402	plant organ development
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009922	fatty acid elongase activity
molecular_function	GO:0102756	very-long-chain 3-ketoacyl-CoA synthase activity