CSPI06G19790 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G19790
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Transcription factor, K-box
Location	Chr6: 17785340 .. 17787549 (+)
RNA-Seq Expression	CSPI06G19790
Synteny	CSPI06G19790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAAATACTTGAACGGTATGAGAGATATTCTTTTGTGGGAAGGCAACAAAATGCAGCTTCTGAATCTGAATTTTCTTATGAAAATTGGACTCTTGAATACTACAGACTCAAGTCCAAAGTCGAACTTCTACAACGAAACAACAGGTATGTCTATGATTAAACTAACGTTTTAAATGTCATTGATATCGATAGATAGTCTTTTGATAATATTATTAAACTGAAAATAACGATGCATGATTGTCTTAAATTTTTTTGTTTTGAATTTGTTACTTGAGGATTCAAACAATCTCATATGAAAGTTCGATACACAGTTGACCTAGGGCGCGTTATTATTATTTTTTTTCTCCCTTTACCTTGTAGACATAGTTAATAGTAAACAACGTAAATCTCTATTTGTTGATTCACTATTATTTTACGTTCTTACTGCCTGTTCATATGTGTCACAAGTTGATCATAGCATTGCTGTATGATATTAACGTGTCGTCTGACAAAAAGTTAATAACCTCAGGTATATTTGTTTGTTTTGTAATTGCAGTCATTATATGGGAGAAGATTTGGATTCGTTGAGTGTCAAAGAACTGCAAAACTTGGAACAACAAATTGACACAGCACTTAAACATGTTCGAACCAGAAAAGTAGGGTTCTTTCTCCTAACGTTTTATAAATATTTGTGATTTATTATTGATTAATTATAAGTTTCTATTGGATTATTTTTCAGAACCAACTTATGTTTGAGTCCATCACTGACCTCCAAAAAAAGGCAAATACTCTTCACTTTTCCCATTTTTTAAATCTTAAATAGAACTTAAGTTCTTTTCGGTTGTTTATTTACTGGATAACTGCCATTGTTATAAATAATAACTAAGTATATAACCGTTTATATTCACAAATTTTATTATATTTACATTTTTAAAATTGTATAATTGCAATATTTGCAACTATCTTTTGTTTAATTTGCATCTTAATATATATATATTTTAATCTTACGTAAATGTCAGGTAAGAAATATAGAGGAGAACAATGTCCAACTGGCTAAGCAGGTGAGTTTTTCTTACATTTTAATTTAATCACATTTTCAATTCTTAAAACGATTTTTGTACCGGCCATAGGGACAAGAGTCGTGCCCCGATGAGTCCGAGGGCACATTGGTCACTGCAATTCCTTGGGTGTGAACCCAGACAAAGTGGTGGTAGTAACAAATATACCAAAATCTTAAAACACATATATATTTCAAATAAAAATATAGTCATCCTAAAATCGAGTAGGAAGTATTATGTTAAAGTTGTCGAAACAGGAAACTGTGTTTAGAGTAATGCATCATGTTATTTGTTTTGAGTTAACATAGGATGTTGTATGTTAATTTTTGATCTAACCCACTAAAAAGTGAAAAAGATTAAACATAATTATTATTAAGTGAAATATATATATATATATATATAGATAAAGGAGAAAGAGAAGAGTGTAGCATTGGCACAACAAGCAGAATGGGAGCACCAGCAACAGCAGGGTTACAATGCTTTGTCTTTCTTATTCCCACCACCTCCTCATCCCTCTCTAAACATTGGGTAATATAATTCATCCACAATATTATTTGTTTATTGTTTCTATTTTGTTAAATTGTGAAAGAAAAAAAATTGAGAGAAGCCTTTCAACAATTAGTGTTTCATACCGTAATTAAATTACAGATTTCCTATGACTAAAACAAAGTTTATAATTTAGTTCTTATCCTACACCTAACTCACATGACTATACCTGAGAAATCCTGATTATGGACTACAGGGACCGGTCCAAATGCATAATTTAACTAAAAATAAACTCTAGACGCTCTATACTAACATTACATGTATCACATTTTCTTTGCATTGTTTGAATCAATGTTAGGCTTGCAAGTTTTGATGGTCACCAATGAAACTTGTTACACGTCGGCAACGATCGGATAAGTACAGGAGATGTGTGTGGCAGAAGAAGAAGAAGAAGAAGAGGAGGTGGGAGGATGTAGTTACTTAATAATGGGAAAATGGAACTAGTTAATACCCTATAAGTGTAATGCTTTGACAACTTAATTATATATGAAGGGGGGTTTCTGGGCTTTTGTTAAATTGACAAAGAAAACATTTGAACTTTGCTGTGTTTGGAGGATTTCTACTAAAAACTTGAGTGTATCAGATTGCTAATATACTACTGAAATGGAGTTGTTTTGTTCCC

mRNA sequence

ATGGAGAAAATACTTGAACGGTATGAGAGATATTCTTTTGTGGGAAGGCAACAAAATGCAGCTTCTGAATCTGAATTTTCTTATGAAAATTGGACTCTTGAATACTACAGACTCAAGTCCAAAGTCGAACTTCTACAACGAAACAACAGTCATTATATGGGAGAAGATTTGGATTCGTTGAGTGTCAAAGAACTGCAAAACTTGGAACAACAAATTGACACAGCACTTAAACATGTTCGAACCAGAAAAAACCAACTTATGTTTGAGTCCATCACTGACCTCCAAAAAAAGGTAAGAAATATAGAGGAGAACAATGTCCAACTGGCTAAGCAGATAAAGGAGAAAGAGAAGAGTGTAGCATTGGCACAACAAGCAGAATGGGAGCACCAGCAACAGCAGGGTTACAATGCTTTGTCTTTCTTATTCCCACCACCTCCTCATCCCTCTCTAAACATTGGGCTTGCAAGTTTTGATGGTCACCAATGAAACTTGTTACACGTCGGCAACGATCGGATAAGTACAGGAGATGTGTGTGGCAGAAGAAGAAGAAGAAGAAGAGGAGGTGGGAGGATGTAGTTACTTAATAATGGGAAAATGGAACTAGTTAATACCCTATAAGTGTAATGCTTTGACAACTTAATTATATATGAAGGGGGGTTTCTGGGCTTTTGTTAAATTGACAAAGAAAACATTTGAACTTTGCTGTGTTTGGAGGATTTCTACTAAAAACTTGAGTGTATCAGATTGCTAATATACTACTGAAATGGAGTTGTTTTGTTCCC

Coding sequence (CDS)

ATGGAGAAAATACTTGAACGGTATGAGAGATATTCTTTTGTGGGAAGGCAACAAAATGCAGCTTCTGAATCTGAATTTTCTTATGAAAATTGGACTCTTGAATACTACAGACTCAAGTCCAAAGTCGAACTTCTACAACGAAACAACAGTCATTATATGGGAGAAGATTTGGATTCGTTGAGTGTCAAAGAACTGCAAAACTTGGAACAACAAATTGACACAGCACTTAAACATGTTCGAACCAGAAAAAACCAACTTATGTTTGAGTCCATCACTGACCTCCAAAAAAAGGTAAGAAATATAGAGGAGAACAATGTCCAACTGGCTAAGCAGATAAAGGAGAAAGAGAAGAGTGTAGCATTGGCACAACAAGCAGAATGGGAGCACCAGCAACAGCAGGGTTACAATGCTTTGTCTTTCTTATTCCCACCACCTCCTCATCCCTCTCTAAACATTGGGCTTGCAAGTTTTGATGGTCACCAATGA

Protein sequence

MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVALAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ*

Homology

[Close]

BLAST of CSPI06G19790 vs. ExPASy Swiss-Prot
Match: Q6E6S7 (Agamous-like MADS-box protein AP1 OS=Vitis vinifera OX=29760 GN=AP1 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 7.8e-40
Identity = 94/153 (61.44%), Postives = 117/153 (76.47%), Query Frame = 0


Query: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60
           MEKIL+RYERYS+  RQ  A      S  NW+LEY +LK+K+ELLQR+  H++GEDLDSL
Sbjct: 63  MEKILDRYERYSYAERQLTATDPE--SQGNWSLEYSKLKAKIELLQRSQRHFLGEDLDSL 122

Query: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120
           S+KELQNLEQQ+DTALKH+R+RKNQLM+ESI++LQ+K + ++E N  LAK+IKEKEK+V 
Sbjct: 123 SLKELQNLEQQLDTALKHIRSRKNQLMYESISELQRKEKAMQEQNNMLAKEIKEKEKTV- 182

Query: 121 LAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIG 154
            AQQ  WE QQ  G N  SFL  P   P LN+G
Sbjct: 183 -AQQTHWE-QQNHGLNTSSFLL-PQQLPCLNMG 209

[Close]

BLAST of CSPI06G19790 vs. ExPASy Swiss-Prot
Match: D7KWY6 (Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=AP1 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 5.6e-38
Identity = 90/148 (60.81%), Postives = 115/148 (77.70%), Query Frame = 0


Query: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60
           MEKILERYERYS+  RQ   A ES+ +  NW++EY RLK+K+ELL+RN  HY+GEDL+++
Sbjct: 63  MEKILERYERYSYAERQL-IAPESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLNAM 122

Query: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120
           S KELQNLEQQ+DTALKH+RTRKNQLM+ESI +LQ+K + I+E N  L+KQIKE+EK + 
Sbjct: 123 SPKELQNLEQQLDTALKHIRTRKNQLMYESINELQRKEKAIQEQNSMLSKQIKEREK-IL 182

Query: 121 LAQQAEWEHQQQQGYNALSFLFPPPPHP 149
            AQQ +W+ QQ  G+N      PPPP P
Sbjct: 183 RAQQEQWD-QQNHGHN-----MPPPPPP 201

[Close]

BLAST of CSPI06G19790 vs. ExPASy Swiss-Prot
Match: P35631 (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana OX=3702 GN=AP1 PE=1 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 9.6e-38
Identity = 91/148 (61.49%), Postives = 114/148 (77.03%), Query Frame = 0


Query: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60
           MEKILERYERYS+  RQ   A ES+ +  NW++EY RLK+K+ELL+RN  HY+GEDL ++
Sbjct: 63  MEKILERYERYSYAERQL-IAPESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 122

Query: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120
           S KELQNLEQQ+DTALKH+RTRKNQLM+ESI +LQKK + I+E N  L+KQIKE+EK + 
Sbjct: 123 SPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREK-IL 182

Query: 121 LAQQAEWEHQQQQGYNALSFLFPPPPHP 149
            AQQ +W+ QQ QG+N       PPP P
Sbjct: 183 RAQQEQWD-QQNQGHNM------PPPLP 200

[Close]

BLAST of CSPI06G19790 vs. ExPASy Swiss-Prot
Match: Q96355 (Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var. italica OX=36774 GN=1AP1 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 6.2e-37
Identity = 88/146 (60.27%), Postives = 114/146 (78.08%), Query Frame = 0


Query: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60
           MEKILERYERYS+  RQ   A ES+ +  NW++EY RLK+K+ELL+RN  HY+GEDL ++
Sbjct: 63  MEKILERYERYSYAERQL-IAPESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 122

Query: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120
           S KELQNLEQQ+DTALKH+R+RKNQLM++S+ +LQ+K + I+E N  L+KQIKE+EK V 
Sbjct: 123 SPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQIKEREK-VL 182

Query: 121 LAQQAEWEHQQQQGYNALSFLFPPPP 147
           +AQQ +W+ QQ  G N  S   PPPP
Sbjct: 183 MAQQEQWD-QQNHGQNMPS---PPPP 201

[Close]

BLAST of CSPI06G19790 vs. ExPASy Swiss-Prot
Match: B4YPV4 (Floral homeotic protein APETALA 1 C OS=Brassica oleracea var. alboglabra OX=3714 GN=AP1C PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 6.2e-37
Identity = 88/146 (60.27%), Postives = 114/146 (78.08%), Query Frame = 0


Query: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60
           MEKILERYERYS+  RQ   A ES+ +  NW++EY RLK+K+ELL+RN  HY+GEDL ++
Sbjct: 63  MEKILERYERYSYAERQL-IAPESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 122

Query: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120
           S KELQNLEQQ+DTALKH+R+RKNQLM++S+ +LQ+K + I+E N  L+KQIKE+EK V 
Sbjct: 123 SPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQIKEREK-VL 182

Query: 121 LAQQAEWEHQQQQGYNALSFLFPPPP 147
           +AQQ +W+ QQ  G N  S   PPPP
Sbjct: 183 MAQQEQWD-QQNHGQNMPS---PPPP 201

[Close]

BLAST of CSPI06G19790 vs. ExPASy TrEMBL
Match: A0A0A0KGY7 (K-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G367090 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 6.6e-82
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60
           MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL
Sbjct: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60

Query: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120
           SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA
Sbjct: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120

Query: 121 LAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ 162
           LAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ
Sbjct: 121 LAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ 161

[Close]

BLAST of CSPI06G19790 vs. ExPASy TrEMBL
Match: A0A1S3BCQ3 (truncated transcription factor CAULIFLOWER A OS=Cucumis melo OX=3656 GN=LOC103488455 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.4e-76
Identity = 151/161 (93.79%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60
           MEKILERYERYSFVGRQQNAASES FS+ENWTLEYYRLKSKVELLQRNNSHY+GEDLDSL
Sbjct: 63  MEKILERYERYSFVGRQQNAASESHFSHENWTLEYYRLKSKVELLQRNNSHYVGEDLDSL 122

Query: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120
           SVKELQNLEQQIDTALKHVR+RKNQLMFESITDLQKKVR IEENN QLAK+IKEKEKSVA
Sbjct: 123 SVKELQNLEQQIDTALKHVRSRKNQLMFESITDLQKKVRTIEENNAQLAKEIKEKEKSVA 182

Query: 121 LAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ 162
           LAQQAEWEHQQ  GY+ALSFLFPPPPHPSLNIGLASFDGHQ
Sbjct: 183 LAQQAEWEHQQHHGYSALSFLFPPPPHPSLNIGLASFDGHQ 223

[Close]

BLAST of CSPI06G19790 vs. ExPASy TrEMBL
Match: A0A6J1GHU4 (truncated transcription factor CAULIFLOWER A-like OS=Cucurbita moschata OX=3662 GN=LOC111454319 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.7e-67
Identity = 138/160 (86.25%), Postives = 147/160 (91.88%), Query Frame = 0


Query: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60
           MEKILERYERYS+VGRQQ AA+ESEFS ENWTLEYYRLKS+VELLQRNNSHYMGEDLDSL
Sbjct: 63  MEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSL 122

Query: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120
           SVKELQNLEQQIDTALKHVR+RKNQLM +SI+ LQ+K R I+E N  LAKQIKEKEKSVA
Sbjct: 123 SVKELQNLEQQIDTALKHVRSRKNQLMHDSISALQRKERAIQEQNALLAKQIKEKEKSVA 182

Query: 121 LAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGH 161
           +AQQAEWE QQQ GYNALSFLFP  PHPSLNIGLASFDGH
Sbjct: 183 MAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGH 222

[Close]

BLAST of CSPI06G19790 vs. ExPASy TrEMBL
Match: A0A6J1BSN0 (truncated transcription factor CAULIFLOWER A-like OS=Momordica charantia OX=3673 GN=LOC111004981 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.5e-67
Identity = 138/163 (84.66%), Postives = 151/163 (92.64%), Query Frame = 0


Query: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60
           MEKILERYERYS+VGRQQ A SE+EFS ENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL
Sbjct: 63  MEKILERYERYSYVGRQQIALSETEFSQENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 122

Query: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120
           SVKELQNLEQQIDTALKH+R+RKNQLM++SI+ LQ+K R I+E N  LAKQIKEKEKSVA
Sbjct: 123 SVKELQNLEQQIDTALKHIRSRKNQLMYDSISALQRKERAIQEQNALLAKQIKEKEKSVA 182

Query: 121 LAQQAEWEHQQQQ--GYNALSFLFPPPPHPSLNIGLASFDGHQ 162
           +AQQAEWEHQQQQ  GY+ALSFLFP PPHPSLNIGLASF+G+Q
Sbjct: 183 MAQQAEWEHQQQQHHGYSALSFLFPTPPHPSLNIGLASFEGNQ 225

[Close]

BLAST of CSPI06G19790 vs. ExPASy TrEMBL
Match: A0A6J1KPM9 (truncated transcription factor CAULIFLOWER A-like OS=Cucurbita maxima OX=3661 GN=LOC111496100 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 7.8e-67
Identity = 137/160 (85.62%), Postives = 146/160 (91.25%), Query Frame = 0


Query: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60
           MEKILERYERYS+VGRQQ AA+ESEFS ENWTLEYYRLKS+VELLQRNNSHYMGEDLDSL
Sbjct: 63  MEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSL 122

Query: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120
           SVKELQNLEQQIDTALKHVR+RKNQLM +SI+ LQ+K R I+E N  LAKQIKEKEKS A
Sbjct: 123 SVKELQNLEQQIDTALKHVRSRKNQLMHDSISALQRKERAIQEQNALLAKQIKEKEKSAA 182

Query: 121 LAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGH 161
           +AQQAEWE QQQ GYNALSFLFP  PHPSLNIGLASFDGH
Sbjct: 183 MAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGH 222

[Close]

BLAST of CSPI06G19790 vs. NCBI nr
Match: XP_004144163.1 (truncated transcription factor CAULIFLOWER A isoform X1 [Cucumis sativus] >KAE8647256.1 hypothetical protein Csa_018276 [Cucumis sativus])

HSP 1 Score: 313.2 bits (801), Expect = 1.4e-81
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60
           MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL
Sbjct: 63  MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 122

Query: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120
           SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA
Sbjct: 123 SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 182

Query: 121 LAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ 162
           LAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ
Sbjct: 183 LAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ 223

[Close]

BLAST of CSPI06G19790 vs. NCBI nr
Match: XP_008445435.1 (PREDICTED: truncated transcription factor CAULIFLOWER A [Cucumis melo])

HSP 1 Score: 295.4 bits (755), Expect = 2.9e-76
Identity = 151/161 (93.79%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60
           MEKILERYERYSFVGRQQNAASES FS+ENWTLEYYRLKSKVELLQRNNSHY+GEDLDSL
Sbjct: 63  MEKILERYERYSFVGRQQNAASESHFSHENWTLEYYRLKSKVELLQRNNSHYVGEDLDSL 122

Query: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120
           SVKELQNLEQQIDTALKHVR+RKNQLMFESITDLQKKVR IEENN QLAK+IKEKEKSVA
Sbjct: 123 SVKELQNLEQQIDTALKHVRSRKNQLMFESITDLQKKVRTIEENNAQLAKEIKEKEKSVA 182

Query: 121 LAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ 162
           LAQQAEWEHQQ  GY+ALSFLFPPPPHPSLNIGLASFDGHQ
Sbjct: 183 LAQQAEWEHQQHHGYSALSFLFPPPPHPSLNIGLASFDGHQ 223

[Close]

BLAST of CSPI06G19790 vs. NCBI nr
Match: XP_031742602.1 (truncated transcription factor CAULIFLOWER A isoform X2 [Cucumis sativus])

HSP 1 Score: 279.3 bits (713), Expect = 2.2e-71
Identity = 147/161 (91.30%), Postives = 147/161 (91.30%), Query Frame = 0


Query: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60
           MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL
Sbjct: 63  MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 122

Query: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120
           SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKK              IKEKEKSVA
Sbjct: 123 SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKK--------------IKEKEKSVA 182

Query: 121 LAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ 162
           LAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ
Sbjct: 183 LAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ 209

[Close]

BLAST of CSPI06G19790 vs. NCBI nr
Match: XP_038886329.1 (truncated transcription factor CAULIFLOWER A-like [Benincasa hispida])

HSP 1 Score: 268.9 bits (686), Expect = 2.9e-68
Identity = 139/161 (86.34%), Postives = 149/161 (92.55%), Query Frame = 0


Query: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60
           MEKILERYERYS+VGRQQ AASESEFS+ENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL
Sbjct: 63  MEKILERYERYSYVGRQQIAASESEFSHENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 122

Query: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120
           SVKELQNLEQQIDTALKHVR+RKNQLM++SI+ LQ+K R I+E N  LAKQIKEKEKSVA
Sbjct: 123 SVKELQNLEQQIDTALKHVRSRKNQLMYDSISALQRKERAIQEQNALLAKQIKEKEKSVA 182

Query: 121 LAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGHQ 162
           +AQQAEWE QQ  GYNALSFLFP  PHPSLNIGLASFDGH+
Sbjct: 183 MAQQAEWEQQQHHGYNALSFLFPSAPHPSLNIGLASFDGHE 223

[Close]

BLAST of CSPI06G19790 vs. NCBI nr
Match: XP_022951531.1 (truncated transcription factor CAULIFLOWER A-like [Cucurbita moschata] >XP_023537553.1 truncated transcription factor CAULIFLOWER A-like [Cucurbita pepo subsp. pepo] >KAG6585254.1 Agamous-like MADS-box protein AP1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020176.1 Floral homeotic protein APETALA 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 264.6 bits (675), Expect = 5.5e-67
Identity = 138/160 (86.25%), Postives = 147/160 (91.88%), Query Frame = 0


Query: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60
           MEKILERYERYS+VGRQQ AA+ESEFS ENWTLEYYRLKS+VELLQRNNSHYMGEDLDSL
Sbjct: 63  MEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSL 122

Query: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120
           SVKELQNLEQQIDTALKHVR+RKNQLM +SI+ LQ+K R I+E N  LAKQIKEKEKSVA
Sbjct: 123 SVKELQNLEQQIDTALKHVRSRKNQLMHDSISALQRKERAIQEQNALLAKQIKEKEKSVA 182

Query: 121 LAQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGH 161
           +AQQAEWE QQQ GYNALSFLFP  PHPSLNIGLASFDGH
Sbjct: 183 MAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGH 222

[Close]

BLAST of CSPI06G19790 vs. TAIR 10
Match: AT1G69120.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 157.9 bits (398), Expect = 6.8e-39
Identity = 91/148 (61.49%), Postives = 114/148 (77.03%), Query Frame = 0


Query: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60
           MEKILERYERYS+  RQ   A ES+ +  NW++EY RLK+K+ELL+RN  HY+GEDL ++
Sbjct: 63  MEKILERYERYSYAERQL-IAPESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 122

Query: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120
           S KELQNLEQQ+DTALKH+RTRKNQLM+ESI +LQKK + I+E N  L+KQIKE+EK + 
Sbjct: 123 SPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREK-IL 182

Query: 121 LAQQAEWEHQQQQGYNALSFLFPPPPHP 149
            AQQ +W+ QQ QG+N       PPP P
Sbjct: 183 RAQQEQWD-QQNQGHNM------PPPLP 200

[Close]

BLAST of CSPI06G19790 vs. TAIR 10
Match: AT1G26310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 134.8 bits (338), Expect = 6.2e-32
Identity = 69/123 (56.10%), Postives = 93/123 (75.61%), Query Frame = 0


Query: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60
           MEK+LERYERYS+  RQ  A      +  NW++EY RLK+K+ELL+RN  HY+GE+L+ +
Sbjct: 63  MEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELEPM 122

Query: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120
           S+K+LQNLEQQ++TALKH+R+RKNQLM ES+  LQ+K + I+E N  L KQIKE+E  + 
Sbjct: 123 SLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENILR 182

Query: 121 LAQ 124
             Q
Sbjct: 183 TKQ 185

[Close]

BLAST of CSPI06G19790 vs. TAIR 10
Match: AT5G60910.1 (AGAMOUS-like 8 )

HSP 1 Score: 118.2 bits (295), Expect = 6.0e-27
Identity = 70/143 (48.95%), Postives = 101/143 (70.63%), Query Frame = 0


Query: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60
           ME+ILERY+RY +  +Q      S+   ENW LE+ +LK++VE+L++N  ++MGEDLDSL
Sbjct: 63  MERILERYDRYLYSDKQLVGRDVSQ--SENWVLEHAKLKARVEVLEKNKRNFMGEDLDSL 122

Query: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120
           S+KELQ+LE Q+D A+K +R+RKNQ MFESI+ LQKK + ++++N  L K+IKE+EK   
Sbjct: 123 SLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREK--- 182

Query: 121 LAQQAEWEHQQQQGYNALSFLFP 144
             +  + E Q  Q  N+ S L P
Sbjct: 183 --KTGQQEGQLVQCSNSSSVLLP 198

[Close]

BLAST of CSPI06G19790 vs. TAIR 10
Match: AT5G60910.2 (AGAMOUS-like 8 )

HSP 1 Score: 118.2 bits (295), Expect = 6.0e-27
Identity = 70/143 (48.95%), Postives = 101/143 (70.63%), Query Frame = 0


Query: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60
           ME+ILERY+RY +  +Q      S+   ENW LE+ +LK++VE+L++N  ++MGEDLDSL
Sbjct: 1   MERILERYDRYLYSDKQLVGRDVSQ--SENWVLEHAKLKARVEVLEKNKRNFMGEDLDSL 60

Query: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVA 120
           S+KELQ+LE Q+D A+K +R+RKNQ MFESI+ LQKK + ++++N  L K+IKE+EK   
Sbjct: 61  SLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREK--- 120

Query: 121 LAQQAEWEHQQQQGYNALSFLFP 144
             +  + E Q  Q  N+ S L P
Sbjct: 121 --KTGQQEGQLVQCSNSSSVLLP 136

[Close]

BLAST of CSPI06G19790 vs. TAIR 10
Match: AT3G30260.1 (AGAMOUS-like 79 )

HSP 1 Score: 85.5 bits (210), Expect = 4.3e-17
Identity = 51/116 (43.97%), Postives = 77/116 (66.38%), Query Frame = 0


Query: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60
           ME+IL+RYER ++ G  Q+  + +  S    + E  +L   +++LQR+  H  GE++D L
Sbjct: 63  MERILDRYERSAYAG--QDIPTPNLDSQGECSTECSKLLRMIDVLQRSLRHLRGEEVDGL 122

Query: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKE 117
           S+++LQ +E Q+DTALK  R+RKNQLM ESI  LQKK + ++E   QL K+  E+E
Sbjct: 123 SIRDLQGVEMQLDTALKKTRSRKNQLMVESIAQLQKKEKELKELKKQLTKKAGERE 176

The following BLAST results are available for this feature:

BLAST of CSPI06G19790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6E6S7	7.8e-40	61.44	Agamous-like MADS-box protein AP1 OS=Vitis vinifera OX=29760 GN=AP1 PE=2 SV=1	[more]
D7KWY6	5.6e-38	60.81	Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 G...	[more]
P35631	9.6e-38	61.49	Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana OX=3702 GN=AP1 PE=1 SV...	[more]
Q96355	6.2e-37	60.27	Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var. italica OX=36774 G...	[more]
B4YPV4	6.2e-37	60.27	Floral homeotic protein APETALA 1 C OS=Brassica oleracea var. alboglabra OX=3714...	[more]

BLAST of CSPI06G19790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGY7	6.6e-82	100.00	K-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G367090 PE=4 ...	[more]
A0A1S3BCQ3	1.4e-76	93.79	truncated transcription factor CAULIFLOWER A OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A6J1GHU4	2.7e-67	86.25	truncated transcription factor CAULIFLOWER A-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1BSN0	3.5e-67	84.66	truncated transcription factor CAULIFLOWER A-like OS=Momordica charantia OX=3673...	[more]
A0A6J1KPM9	7.8e-67	85.63	truncated transcription factor CAULIFLOWER A-like OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of CSPI06G19790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144163.1	1.4e-81	100.00	truncated transcription factor CAULIFLOWER A isoform X1 [Cucumis sativus] >KAE86...	[more]
XP_008445435.1	2.9e-76	93.79	PREDICTED: truncated transcription factor CAULIFLOWER A [Cucumis melo]	[more]
XP_031742602.1	2.2e-71	91.30	truncated transcription factor CAULIFLOWER A isoform X2 [Cucumis sativus]	[more]
XP_038886329.1	2.9e-68	86.34	truncated transcription factor CAULIFLOWER A-like [Benincasa hispida]	[more]
XP_022951531.1	5.5e-67	86.25	truncated transcription factor CAULIFLOWER A-like [Cucurbita moschata] >XP_02353...	[more]

BLAST of CSPI06G19790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69120.1	6.8e-39	61.49	K-box region and MADS-box transcription factor family protein	[more]
AT1G26310.1	6.2e-32	56.10	K-box region and MADS-box transcription factor family protein	[more]
AT5G60910.1	6.0e-27	48.95	AGAMOUS-like 8	[more]
AT5G60910.2	6.0e-27	48.95	AGAMOUS-like 8	[more]
AT3G30260.1	4.3e-17	43.97	AGAMOUS-like 79	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 91..125
None	No IPR available	COILS	Coil	Coil	coord: 65..85
None	No IPR available	PANTHER	PTHR48019:SF79	TRUNCATED TRANSCRIPTION FACTOR CAULIFLOWER A	coord: 2..153
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 2..153
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 24..112 e-value: 5.3E-29 score: 100.3
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 28..118 score: 16.755291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G19790.1	CSPI06G19790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010582	floral meristem determinacy
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)+] activity
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity