CSPI06G19290 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G19290
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Transmembrane protein, putative
Location	Chr6: 17440035 .. 17440974 (+)
RNA-Seq Expression	CSPI06G19290
Synteny	CSPI06G19290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTAACCAAATCCTGCCTTTTTTTGTCTTCTTGTTCTTGTTCTTCCACCTTTCTGTTTTGTTTTATTTTGTGTTAGGTTGAAAAATAAAAACAAGAAGAAGAACAAAAAAAAAAGAAAAGAAAAAAAAACAGAGTATTCAGGGAATGAAGAGATGAAAACAGAGTTCCTCTGTTGGGTTTTCTTTTCCTCTGTTTTTTAAATGTTTTAGTCATGGTGAGAAGCTTTCCGACGGATGACAATCCGTTAATTCATCCGGCGATACCTCTGTTCCTTCTAGCGGCCGGAATGGCAGCAGCTATTTCCATGATCACGACGCTATGTGGTGTTCGATCTCGAAGAAGATCGACGCCGTCCGAAGATTCGTCTCATGCCGCCGCAGACAACAAAACAGACGAAAATGTTTCCCCAACAACAACGACACCGTTTCAGGCCGCAAACCCATCTGGTGGAGAAGCAGAGAACGAGGGGGAAATGAAAGAACTTCCCCTGCCTCCAAAAATGCAACAAGTGGCGAGTACGAGCCCACCGAGCCAAATATCGAAATCAGCATCGGAGAGGAAATTGAATCATATGAGAAGCATGAGCATTAAAGTTCCTAGAAGTCTTTCGGTTGTGAGGAATCATTTGGATGAAGGGAGACAGAGGAGGAAAGAGAGGATTAAAGGGGAAGATTCCATTTGGACAAAGACAATAATTTTAGGGGAAAAATGTAAAGTTTCAGATGAAGAAGATGGAATCATATATGAAGGAAAAGGGAAGAAGATAACAGCTTATCATCCGAGAGCTCCTAGTTCGATGTCGATATCAATGTCGAGGCAGAATTCCGCCGTTGAAGCTGAAGCTCTGCAAAGCTCAGAAGCAAAATAAACCCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGATACAATTTTAAAATCAATGGCTGATGAAATTTGA

mRNA sequence

ATTTTAACCAAATCCTGCCTTTTTTTGTCTTCTTGTTCTTGTTCTTCCACCTTTCTGTTTTGTTTTATTTTGTGTTAGGTTGAAAAATAAAAACAAGAAGAAGAACAAAAAAAAAAGAAAAGAAAAAAAAACAGAGTATTCAGGGAATGAAGAGATGAAAACAGAGTTCCTCTGTTGGGTTTTCTTTTCCTCTGTTTTTTAAATGTTTTAGTCATGGTGAGAAGCTTTCCGACGGATGACAATCCGTTAATTCATCCGGCGATACCTCTGTTCCTTCTAGCGGCCGGAATGGCAGCAGCTATTTCCATGATCACGACGCTATGTGGTGTTCGATCTCGAAGAAGATCGACGCCGTCCGAAGATTCGTCTCATGCCGCCGCAGACAACAAAACAGACGAAAATGTTTCCCCAACAACAACGACACCGTTTCAGGCCGCAAACCCATCTGGTGGAGAAGCAGAGAACGAGGGGGAAATGAAAGAACTTCCCCTGCCTCCAAAAATGCAACAAGTGGCGAGTACGAGCCCACCGAGCCAAATATCGAAATCAGCATCGGAGAGGAAATTGAATCATATGAGAAGCATGAGCATTAAAGTTCCTAGAAGTCTTTCGGTTGTGAGGAATCATTTGGATGAAGGGAGACAGAGGAGGAAAGAGAGGATTAAAGGGGAAGATTCCATTTGGACAAAGACAATAATTTTAGGGGAAAAATGTAAAGTTTCAGATGAAGAAGATGGAATCATATATGAAGGAAAAGGGAAGAAGATAACAGCTTATCATCCGAGAGCTCCTAGTTCGATGTCGATATCAATGTCGAGGCAGAATTCCGCCGTTGAAGCTGAAGCTCTGCAAAGCTCAGAAGCAAAATAAACCCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGATACAATTTTAAAATCAATGGCTGATGAAATTTGA

Coding sequence (CDS)

ATGGTGAGAAGCTTTCCGACGGATGACAATCCGTTAATTCATCCGGCGATACCTCTGTTCCTTCTAGCGGCCGGAATGGCAGCAGCTATTTCCATGATCACGACGCTATGTGGTGTTCGATCTCGAAGAAGATCGACGCCGTCCGAAGATTCGTCTCATGCCGCCGCAGACAACAAAACAGACGAAAATGTTTCCCCAACAACAACGACACCGTTTCAGGCCGCAAACCCATCTGGTGGAGAAGCAGAGAACGAGGGGGAAATGAAAGAACTTCCCCTGCCTCCAAAAATGCAACAAGTGGCGAGTACGAGCCCACCGAGCCAAATATCGAAATCAGCATCGGAGAGGAAATTGAATCATATGAGAAGCATGAGCATTAAAGTTCCTAGAAGTCTTTCGGTTGTGAGGAATCATTTGGATGAAGGGAGACAGAGGAGGAAAGAGAGGATTAAAGGGGAAGATTCCATTTGGACAAAGACAATAATTTTAGGGGAAAAATGTAAAGTTTCAGATGAAGAAGATGGAATCATATATGAAGGAAAAGGGAAGAAGATAACAGCTTATCATCCGAGAGCTCCTAGTTCGATGTCGATATCAATGTCGAGGCAGAATTCCGCCGTTGAAGCTGAAGCTCTGCAAAGCTCAGAAGCAAAATAA

Protein sequence

MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEAENEGEMKELPLPPKMQQVASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMSISMSRQNSAVEAEALQSSEAK*

Homology

[Close]

BLAST of CSPI06G19290 vs. ExPASy TrEMBL
Match: A0A5A7VC31 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00340 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 9.2e-95
Identity = 195/221 (88.24%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 1   MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAAD-NK 60
           MVRSFPTDDNPLIHPAI LFLLAAGMAAAI+MITTLCGVRSRRRSTPSE SS  A + NK
Sbjct: 1   MVRSFPTDDNPLIHPAISLFLLAAGMAAAIAMITTLCGVRSRRRSTPSEASSPTATENNK 60

Query: 61  TDENVSPTTTTP--FQAANPSGGEAENEGEMKELPLPPKMQQVASTSPPSQISKSASERK 120
            +ENVSPTTTTP    AANPS  E ENEGE+KELPLPPKMQQV S+SPP+QI KSASERK
Sbjct: 61  AEENVSPTTTTPSLATAANPSDRETENEGEVKELPLPPKMQQVTSSSPPNQILKSASERK 120

Query: 121 LNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGII 180
           LNHMRSMSIKVPRSLSVVRNHLDEGRQRRKE+IKGEDSIWTKTIILGEKCKVSDEEDGII
Sbjct: 121 LNHMRSMSIKVPRSLSVVRNHLDEGRQRRKEKIKGEDSIWTKTIILGEKCKVSDEEDGII 180

Query: 181 YEGKGKKITAYHPRAPSSMSISMSRQNSAVEAEALQSSEAK 219
           YEGKGKKITAYHPRAPSSMSISMSRQNSA EAEAL +SEAK
Sbjct: 181 YEGKGKKITAYHPRAPSSMSISMSRQNSANEAEALPNSEAK 221

[Close]

BLAST of CSPI06G19290 vs. ExPASy TrEMBL
Match: A0A0A0KD46 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G364120 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.5e-94
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 32  MITTLCGVRSRRRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEAENEGEMKEL 91
           MITTLCGVRSRRRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEAENEGEMKEL
Sbjct: 1   MITTLCGVRSRRRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEAENEGEMKEL 60

Query: 92  PLPPKMQQVASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIK 151
           PLPPKMQQVASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIK
Sbjct: 61  PLPPKMQQVASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIK 120

Query: 152 GEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMSISMSRQNSAVEAEA 211
           GEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMSISMSRQNSAVEAEA
Sbjct: 121 GEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMSISMSRQNSAVEAEA 180

Query: 212 LQSSEAK 219
           LQSSEAK
Sbjct: 181 LQSSEAK 187

[Close]

BLAST of CSPI06G19290 vs. ExPASy TrEMBL
Match: A0A6J1KUB9 (uncharacterized protein LOC111496482 OS=Cucurbita maxima OX=3661 GN=LOC111496482 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 1.1e-66
Identity = 148/223 (66.37%), Postives = 175/223 (78.48%), Query Frame = 0


Query: 1   MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAADNKT 60
           MV SFPTD+N LIHPAI L L+AAGM  AI+MIT LCGVRSRR  +PSE SS   AD K 
Sbjct: 17  MVGSFPTDENLLIHPAISLTLMAAGMVTAIAMITALCGVRSRRSPSPSEASS-KTADKKQ 76

Query: 61  DENVSPTTTTPFQAANPSGGEA-----ENEGEMKELPLPPKMQQVASTSPPSQISKSASE 120
           D N S TTT+    A P+ G++     E E  MKELPLPPKMQQVAS SPPSQI+KSASE
Sbjct: 77  DINGSRTTTSSTAGATPAAGDSGDDGGETEEFMKELPLPPKMQQVASPSPPSQIAKSASE 136

Query: 121 RKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDG 180
           R+L HM  M+++VPRS SV R  L+EG +RRKE++K E+ IW KTIILGEKC+VSDEEDG
Sbjct: 137 RRLKHMTGMNMEVPRSHSVARKDLEEGGERRKEKMKEEELIWKKTIILGEKCRVSDEEDG 196

Query: 181 IIYEGKGKKITAYHPRAPSSMSISMSRQNSAVEAEALQSSEAK 219
           +IYEGKGK+I+AYHPR+PSSMSIS+SRQ+SA++AEAL    AK
Sbjct: 197 VIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALPDLGAK 238

[Close]

BLAST of CSPI06G19290 vs. ExPASy TrEMBL
Match: A0A6A1WQ24 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR1G029376 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 3.3e-36
Identity = 102/231 (44.16%), Postives = 142/231 (61.47%), Query Frame = 0


Query: 1   MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSS--HAAADN 60
           MVR  PT++ PL HP +   LLA G+AAAI+ IT LCG R  +R +P   SS  H  A+ 
Sbjct: 72  MVRRIPTNEEPLTHPVLSFSLLAVGLAAAIATITALCGGRLWKRLSPPSPSSVHHKTAEK 131

Query: 61  KTDENVSPTTTT--------PFQAANPSGGEA---ENEGEMKELPLPPKMQQVASTSPPS 120
               N++ TT T        P +AA P+  E    + E + +ELPLPP M  +  +    
Sbjct: 132 LDASNLTATTMTITSQTPPSPRKAAKPTESEGTTHDKESQARELPLPPAMMPMRESQSRV 191

Query: 121 QISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKC 180
           +I+KS+S+R L   +++++K+PRSLS+ R    E   +RK+ +  EDSIW KTIILGEKC
Sbjct: 192 RITKSSSDRNL--AKNLTMKLPRSLSMARK---EDNNQRKKGLNSEDSIWMKTIILGEKC 251

Query: 181 KVSDEEDGIIYEGKGKKITAYHPRAPSSMSISMSRQNSAVEAEALQSSEAK 219
           KV DE+D +IY+GKGK+I+ YHP+ PS   IS+SR+ S  E EA    E +
Sbjct: 252 KVPDEDDAVIYDGKGKRISTYHPKTPS--MISLSRRGSFSEPEARPGPEGE 295

[Close]

BLAST of CSPI06G19290 vs. ExPASy TrEMBL
Match: A0A7N2KRH9 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.7e-32
Identity = 87/210 (41.43%), Postives = 128/210 (60.95%), Query Frame = 0


Query: 1   MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTP------SEDSSHA 60
           M R  P+D+N LIHP     LLA GM A I+MIT LCGVRSR++S+P      ++   ++
Sbjct: 1   MGRRIPSDENLLIHPEFSFSLLAIGMVATIAMITALCGVRSRKKSSPLSSPPLNKKEENS 60

Query: 61  AADNKTDENVSPTTTTPFQAANPSGGEAENEGEMKELPLPPKMQQVASTSPPSQISKSAS 120
              N     V+ T++   +           + ++KELPLPP M+ +  +   + I+KS+S
Sbjct: 61  VVSNSASSTVTITSSKAAEPVELEDSSHNKKPQIKELPLPPSMKPIKESHSCNLITKSSS 120

Query: 121 ERKLNHMRSMSIKVPRSLSVVR----NHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVS 180
           ER+L    S+S+K+PRSLS  +       +E  Q++K  +  ED++W KTIILGEKCKV 
Sbjct: 121 ERRL--PMSLSMKLPRSLSTAKREENRRKEENHQQKKRDLNSEDTVWMKTIILGEKCKVP 180

Query: 181 DEED-GIIYEGKGKKITAYHPRAPSSMSIS 200
            E+D  +IY+GKG +I+AYHP+ PS  S+S
Sbjct: 181 AEDDAAVIYDGKGNRISAYHPKTPSMFSLS 208

[Close]

BLAST of CSPI06G19290 vs. NCBI nr
Match: KGN47811.2 (hypothetical protein Csa_018925 [Cucumis sativus])

HSP 1 Score: 413.3 bits (1061), Expect = 1.3e-111
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAADNKT 60
           MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAADNKT
Sbjct: 1   MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAADNKT 60

Query: 61  DENVSPTTTTPFQAANPSGGEAENEGEMKELPLPPKMQQVASTSPPSQISKSASERKLNH 120
           DENVSPTTTTPFQAANPSGGEAENEGEMKELPLPPKMQQVASTSPPSQISKSASERKLNH
Sbjct: 61  DENVSPTTTTPFQAANPSGGEAENEGEMKELPLPPKMQQVASTSPPSQISKSASERKLNH 120

Query: 121 MRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEG 180
           MRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEG
Sbjct: 121 MRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEG 180

Query: 181 KGKKITAYHPRAPSSMSISMSRQNSAVEAEALQSSEAK 219
           KGKKITAYHPRAPSSMSISMSRQNSAVEAEALQSSEAK
Sbjct: 181 KGKKITAYHPRAPSSMSISMSRQNSAVEAEALQSSEAK 218

[Close]

BLAST of CSPI06G19290 vs. NCBI nr
Match: KAA0064730.1 (putative transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 356.3 bits (913), Expect = 1.9e-94
Identity = 195/221 (88.24%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 1   MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAAD-NK 60
           MVRSFPTDDNPLIHPAI LFLLAAGMAAAI+MITTLCGVRSRRRSTPSE SS  A + NK
Sbjct: 1   MVRSFPTDDNPLIHPAISLFLLAAGMAAAIAMITTLCGVRSRRRSTPSEASSPTATENNK 60

Query: 61  TDENVSPTTTTP--FQAANPSGGEAENEGEMKELPLPPKMQQVASTSPPSQISKSASERK 120
            +ENVSPTTTTP    AANPS  E ENEGE+KELPLPPKMQQV S+SPP+QI KSASERK
Sbjct: 61  AEENVSPTTTTPSLATAANPSDRETENEGEVKELPLPPKMQQVTSSSPPNQILKSASERK 120

Query: 121 LNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGII 180
           LNHMRSMSIKVPRSLSVVRNHLDEGRQRRKE+IKGEDSIWTKTIILGEKCKVSDEEDGII
Sbjct: 121 LNHMRSMSIKVPRSLSVVRNHLDEGRQRRKEKIKGEDSIWTKTIILGEKCKVSDEEDGII 180

Query: 181 YEGKGKKITAYHPRAPSSMSISMSRQNSAVEAEALQSSEAK 219
           YEGKGKKITAYHPRAPSSMSISMSRQNSA EAEAL +SEAK
Sbjct: 181 YEGKGKKITAYHPRAPSSMSISMSRQNSANEAEALPNSEAK 221

[Close]

BLAST of CSPI06G19290 vs. NCBI nr
Match: KAG6598610.1 (hypothetical protein SDJN03_08388, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029546.1 hypothetical protein SDJN02_07885, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 302.8 bits (774), Expect = 2.5e-78
Identity = 163/221 (73.76%), Postives = 186/221 (84.16%), Query Frame = 0


Query: 1   MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAADNKT 60
           MVRSFPTD+NPLIHPAI L LLAAGMAAAI+MITTLCG RSR+  T SE SS  AADNK 
Sbjct: 1   MVRSFPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKP 60

Query: 61  DENVSPTTTTPFQAANPSGGEAENEGE---MKELPLPPKMQQVASTSPPSQISKSASERK 120
           DEN SPT        NPSGGE  N+G+   +KELPLPPKMQQ+ S SPP+QISKSASERK
Sbjct: 61  DENASPT-------VNPSGGETGNDGDEQGVKELPLPPKMQQLGSASPPTQISKSASERK 120

Query: 121 LNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGII 180
           L HM+SM++ VPRSLSV R++LD+GR ++K++IKGEDSIWTKTIILGEKCKV+DEEDGII
Sbjct: 121 LTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGII 180

Query: 181 YEGKGKKITAYHPRAPSSMSISMSRQNSAVEAEALQSSEAK 219
           YEGKGKKI+AYHPRAPSSMS S+SRQ SA++AEAL S E K
Sbjct: 181 YEGKGKKISAYHPRAPSSMSASLSRQGSAIDAEALPSPEDK 214

[Close]

BLAST of CSPI06G19290 vs. NCBI nr
Match: XP_023002698.1 (uncharacterized protein LOC111496482 [Cucurbita maxima])

HSP 1 Score: 263.1 bits (671), Expect = 2.2e-66
Identity = 148/223 (66.37%), Postives = 175/223 (78.48%), Query Frame = 0


Query: 1   MVRSFPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAADNKT 60
           MV SFPTD+N LIHPAI L L+AAGM  AI+MIT LCGVRSRR  +PSE SS   AD K 
Sbjct: 17  MVGSFPTDENLLIHPAISLTLMAAGMVTAIAMITALCGVRSRRSPSPSEASS-KTADKKQ 76

Query: 61  DENVSPTTTTPFQAANPSGGEA-----ENEGEMKELPLPPKMQQVASTSPPSQISKSASE 120
           D N S TTT+    A P+ G++     E E  MKELPLPPKMQQVAS SPPSQI+KSASE
Sbjct: 77  DINGSRTTTSSTAGATPAAGDSGDDGGETEEFMKELPLPPKMQQVASPSPPSQIAKSASE 136

Query: 121 RKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDG 180
           R+L HM  M+++VPRS SV R  L+EG +RRKE++K E+ IW KTIILGEKC+VSDEEDG
Sbjct: 137 RRLKHMTGMNMEVPRSHSVARKDLEEGGERRKEKMKEEELIWKKTIILGEKCRVSDEEDG 196

Query: 181 IIYEGKGKKITAYHPRAPSSMSISMSRQNSAVEAEALQSSEAK 219
           +IYEGKGK+I+AYHPR+PSSMSIS+SRQ+SA++AEAL    AK
Sbjct: 197 VIYEGKGKRISAYHPRSPSSMSISISRQSSAIDAEALPDLGAK 238

[Close]

BLAST of CSPI06G19290 vs. NCBI nr
Match: KAG6585751.1 (hypothetical protein SDJN03_18484, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 231.9 bits (590), Expect = 5.4e-57
Identity = 131/203 (64.53%), Postives = 158/203 (77.83%), Query Frame = 0


Query: 22  LAAGMAAAISMITTLCGVRSR-RRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGG 81
           +AAGM AAI+MIT LCGVRSR RRS+P  ++S   AD K D N S TTT+      P  G
Sbjct: 1   MAAGMVAAIAMITALCGVRSRSRRSSPPSEASSKTADKKQDINGSRTTTSSTAGTTPVAG 60

Query: 82  EAENEGE-----MKELPLPPKMQQVASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVV 141
           E+ N+G      MKELPLPPKMQQVAS SPPS+I+KSASER+L HM S+++KVPRS SV 
Sbjct: 61  ESGNDGVETEELMKELPLPPKMQQVASPSPPSKIAKSASERRLKHMTSLNMKVPRSHSVA 120

Query: 142 RNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSS 201
           R  L+EG  RRKE++  E+ IW KTIILGEKC+VSDEEDG+IYEGKGK+I+AYHPR+PSS
Sbjct: 121 RKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPSS 180

Query: 202 MSISMSRQNSAVEAEALQSSEAK 219
           MSIS+SRQ+SA++AEAL    AK
Sbjct: 181 MSISISRQSSAIDAEALPDLGAK 203

[Close]

BLAST of CSPI06G19290 vs. TAIR 10
Match: AT5G26114.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 6.6e-05
Identity = 27/79 (34.18%), Postives = 48/79 (60.76%), Query Frame = 0


Query: 134 VVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKIT---AYHP 193
           V++   +E +  RK+++  ++SI    IILGE+C+V D E+G   E + +++     Y P
Sbjct: 2   VLKRDKEEDKSVRKKKLNADNSILVLPIILGERCRVLDAEEG--DEDQSQRMAENRIYRP 61

Query: 194 RAPSSMSISMSRQNSAVEA 210
           R+ SS+SIS ++ N  + A
Sbjct: 62  RSMSSISISRTKSNIDMNA 78

The following BLAST results are available for this feature:

BLAST of CSPI06G19290 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G19290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VC31	9.2e-95	88.24	Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A0A0KD46	4.5e-94	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G364120 PE=4 SV=1	[more]
A0A6J1KUB9	1.1e-66	66.37	uncharacterized protein LOC111496482 OS=Cucurbita maxima OX=3661 GN=LOC111496482...	[more]
A0A6A1WQ24	3.3e-36	44.16	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR1G029376 PE=4 SV=1	[more]
A0A7N2KRH9	1.7e-32	41.43	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of CSPI06G19290 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN47811.2	1.3e-111	100.00	hypothetical protein Csa_018925 [Cucumis sativus]	[more]
KAA0064730.1	1.9e-94	88.24	putative transmembrane protein [Cucumis melo var. makuwa]	[more]
KAG6598610.1	2.5e-78	73.76	hypothetical protein SDJN03_08388, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023002698.1	2.2e-66	66.37	uncharacterized protein LOC111496482 [Cucurbita maxima]	[more]
KAG6585751.1	5.4e-57	64.53	hypothetical protein SDJN03_18484, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CSPI06G19290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26114.1	6.6e-05	34.18	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..57
None	No IPR available	PANTHER	PTHR36801	OS06G0150200 PROTEIN	coord: 1..216
None	No IPR available	PANTHER	PTHR36801:SF3	OS06G0150200 PROTEIN	coord: 1..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G19290.1	CSPI06G19290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity