CSPI06G03720 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI06G03720
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr6: 3416435 .. 3416602 (+)
RNA-Seq ExpressionCSPI06G03720
SyntenyCSPI06G03720
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGCAGTGTTGGCCACAAAAACTCTACACTGTACAGATCTCAATTTGATGCCTGCCAAAAGATTAGTGAGACGATGGATGCTAGTTAAAGCTGCAGATGACAGATATAGAGATACAATGGCATTAAAGTGGAAGGCCAAAGCAGAAGCTGAGGTCAAAGAATAA

mRNA sequence

ATGGATGCAGTGTTGGCCACAAAAACTCTACACTGTACAGATCTCAATTTGATGCCTGCCAAAAGATTAGTGAGACGATGGATGCTAGTTAAAGCTGCAGATGACAGATATAGAGATACAATGGCATTAAAGTGGAAGGCCAAAGCAGAAGCTGAGGTCAAAGAATAA

Coding sequence (CDS)

ATGGATGCAGTGTTGGCCACAAAAACTCTACACTGTACAGATCTCAATTTGATGCCTGCCAAAAGATTAGTGAGACGATGGATGCTAGTTAAAGCTGCAGATGACAGATATAGAGATACAATGGCATTAAAGTGGAAGGCCAAAGCAGAAGCTGAGGTCAAAGAATAA

Protein sequence

MDAVLATKTLHCTDLNLMPAKRLVRRWMLVKAADDRYRDTMALKWKAKAEAEVKE*
Homology
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BLAST of CSPI06G03720 vs. ExPASy TrEMBL
Match: A0A0A0KB24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G042480 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.0e-21
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 0 

Query: 1  MDAVLATKTLHCTDLNLMPAKRLVRRWMLVKAADDRYRDTMALKWKAKAEAEVKE 56
          MDAVLATK LHCTDLNLMPAKRLVRRWMLVKAADDRYRDTMALKWKAKAEAEVKE
Sbjct: 1  MDAVLATKILHCTDLNLMPAKRLVRRWMLVKAADDRYRDTMALKWKAKAEAEVKE 55

The following BLAST results are available for this feature:
BLAST of CSPI06G03720 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI06G03720 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KB245.0e-2198.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G042480 PE=4 SV=1[more]
BLAST of CSPI06G03720 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of CSPI06G03720 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G03720.1CSPI06G03720.1mRNA