Homology
BLAST of CSPI05G17320 vs. ExPASy Swiss-Prot
Match:
O80634 (Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL1 PE=1 SV=2)
HSP 1 Score: 265.0 bits (676), Expect = 8.1e-70
Identity = 136/236 (57.63%), Postives = 167/236 (70.76%), Query Frame = 0
Query: 2 AVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTINCSIERISRDEG-IYNRRPL 61
++S C + P + K ++L N A SS + S + G + RR
Sbjct: 5 SLSIRCGGFSPTISH--KTEILCPNPSLKACCLLSSGGKADSSESTYQKGSGNNWKRRQA 64
Query: 62 LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 121
L+GVG L + + A+ L AEEIPK+Y FVD DGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 65 LVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDSAFKDRY 124
Query: 122 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGKNYYT 181
LQLQNVRV+FIPTEK DIHE GP++EVV LVKH++AAPNQ TIYDMKER DGKNYYT
Sbjct: 125 LQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVEDGKNYYT 184
Query: 182 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 237
FEY L + ++ TSFAT+A+ N RYYTL+VGAN+RRWR+ + L+VVADS ++L I
Sbjct: 185 FEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 238
BLAST of CSPI05G17320 vs. ExPASy Swiss-Prot
Match:
P82538 (PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 SV=1)
HSP 1 Score: 146.7 bits (369), Expect = 3.2e-34
Identity = 79/201 (39.30%), Postives = 111/201 (55.22%), Query Frame = 0
Query: 34 SFSSSSTINCSIERISRDEGIYNRRPLLLGVGALATSLLGASPL-FAEEIPKNYRAFVDS 93
S SSSS + +R R + GV A SLL +PL FA E K + A D+
Sbjct: 37 SSSSSSHLQDKCQR---------RLIVTFGVVAPWISLLSRAPLSFAAESKKGFLAVSDN 96
Query: 94 TDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLV 153
D Y++ YP W+E D +KD L++V V +PT K+ I E GP ++ L+
Sbjct: 97 KDAYAFLYPFGWQEVVIEGQDKVYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQIAETLI 156
Query: 154 KHRYAAPNQKTTIYDMKERTIDGKNYYTFEYKLSSRAFSRTSFATIAIANGRYYTLVVGA 213
K A PNQKTT+ D E +DGK YY FE+ + +R ++R + TI + NG +YTL GA
Sbjct: 157 KKVLAPPNQKTTLIDASEHDVDGKTYYQFEFTVQARNYTRHALGTITVFNGNFYTLTTGA 216
Query: 214 NDRRWRRYRDMLKVVADSFRV 234
N+RRW + +D L V DSF++
Sbjct: 217 NERRWEKMKDRLHTVVDSFKI 228
BLAST of CSPI05G17320 vs. ExPASy Swiss-Prot
Match:
O23403 (PsbP domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD1 PE=1 SV=1)
HSP 1 Score: 50.1 bits (118), Expect = 4.1e-05
Identity = 40/176 (22.73%), Postives = 72/176 (40.91%), Query Frame = 0
Query: 86 YRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKD---IHEEG 145
+R ++D+ DGYS+ YP +W + D F+D + +N+ V+F + + + G
Sbjct: 109 FREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYTSLEDLG 168
Query: 146 PLDEVVNFLVKH--------RYAAPNQKTTIYDMKERTIDGKNYYTFEYKLSSRA----- 205
+EV +++ R Q + DGK YY E + S A
Sbjct: 169 SPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSSRVADDGKLYYQVEVNIKSYANNNEL 228
Query: 206 ------------FSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV 234
++R A + + N R Y++ + ++ + L+ V DSFRV
Sbjct: 229 AVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQTPEKVFLEEEKDLRRVMDSFRV 284
BLAST of CSPI05G17320 vs. ExPASy TrEMBL
Match:
A0A0A0KNR7 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G505780 PE=4 SV=1)
HSP 1 Score: 473.0 bits (1216), Expect = 7.3e-130
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 0
Query: 1 MAVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTINCSIERISRDEGIYNRRPL 60
MAVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTINCSIERISRDEGIYNRRPL
Sbjct: 1 MAVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTINCSIERISRDEGIYNRRPL 60
Query: 61 LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61 LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGKNYYT 180
LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGK YYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGKIYYT 180
Query: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 237
FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
BLAST of CSPI05G17320 vs. ExPASy TrEMBL
Match:
A0A1S3CKZ3 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501649 PE=4 SV=1)
HSP 1 Score: 464.9 bits (1195), Expect = 2.0e-127
Identity = 228/236 (96.61%), Postives = 232/236 (98.31%), Query Frame = 0
Query: 1 MAVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTINCSIERISRDEGIYNRRPL 60
MAVSTSCLSWVP TASNWKLKLLPFNEP+TATSSFSSSSTINCSIER SRDEGIYNRRPL
Sbjct: 1 MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
Query: 61 LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
LLGVGALATSLLGASPLFA+E+PKNYRAFVD TDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61 LLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGKNYYT 180
LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQK TIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180
Query: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 237
FEYKLSSRAFSRT+FATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
BLAST of CSPI05G17320 vs. ExPASy TrEMBL
Match:
A0A1S3CJF3 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501649 PE=4 SV=1)
HSP 1 Score: 458.0 bits (1177), Expect = 2.4e-125
Identity = 227/236 (96.19%), Postives = 231/236 (97.88%), Query Frame = 0
Query: 1 MAVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTINCSIERISRDEGIYNRRPL 60
MAVSTSCLSWVP TASNWKLKLLPFNEP+TATSSFSSSSTINCSIER SRDEGIYNRRPL
Sbjct: 1 MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
Query: 61 LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
LLGVGALATSLLGASPLFA ++PKNYRAFVD TDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61 LLGVGALATSLLGASPLFA-QVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGKNYYT 180
LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQK TIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180
Query: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 237
FEYKLSSRAFSRT+FATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 235
BLAST of CSPI05G17320 vs. ExPASy TrEMBL
Match:
A0A6J1GN93 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455996 PE=4 SV=1)
HSP 1 Score: 431.0 bits (1107), Expect = 3.2e-117
Identity = 212/236 (89.83%), Postives = 220/236 (93.22%), Query Frame = 0
Query: 1 MAVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTINCSIERISRDEGIYNRRPL 60
MAVSTSCLSWVP +ASNWK +LLPFNEPSTAT S+SS +TI CS ER SR E NRRPL
Sbjct: 1 MAVSTSCLSWVPTSASNWKPRLLPFNEPSTATCSYSSCTTIICSTERTSRVESHCNRRPL 60
Query: 61 LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
LLGVGALA SL ASPLFAEE+PKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61 LLGVGALAASLFAASPLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGKNYYT 180
LQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQK TIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGSLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT 180
Query: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 237
FEYKLSSRA+SRTSFATIA+ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAYSRTSFATIAVANGRYYTLIVGANDRRWRRYRDMLKVVADSFRVLDI 236
BLAST of CSPI05G17320 vs. ExPASy TrEMBL
Match:
A0A6J1JS28 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487305 PE=4 SV=1)
HSP 1 Score: 430.6 bits (1106), Expect = 4.1e-117
Identity = 211/236 (89.41%), Postives = 220/236 (93.22%), Query Frame = 0
Query: 1 MAVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTINCSIERISRDEGIYNRRPL 60
MAVSTSCLSWVP +ASNWK +LLPFNEPSTAT S+SS +T+ CS ER SR E NRRPL
Sbjct: 1 MAVSTSCLSWVPTSASNWKPRLLPFNEPSTATCSYSSCTTVICSTERTSRVESQCNRRPL 60
Query: 61 LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
LLGVGALATSL A PLFAEE+PKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61 LLGVGALATSLFAARPLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGKNYYT 180
LQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQK TIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGSLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT 180
Query: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 237
FEYKLSSRA+SRTSFATIA+ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAYSRTSFATIAVANGRYYTLIVGANDRRWRRYRDMLKVVADSFRVLDI 236
BLAST of CSPI05G17320 vs. NCBI nr
Match:
XP_004149826.1 (photosynthetic NDH subunit of lumenal location 1, chloroplastic [Cucumis sativus] >KGN51268.1 hypothetical protein Csa_009408 [Cucumis sativus])
HSP 1 Score: 473.0 bits (1216), Expect = 1.5e-129
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 0
Query: 1 MAVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTINCSIERISRDEGIYNRRPL 60
MAVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTINCSIERISRDEGIYNRRPL
Sbjct: 1 MAVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTINCSIERISRDEGIYNRRPL 60
Query: 61 LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61 LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGKNYYT 180
LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGK YYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGKIYYT 180
Query: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 237
FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
BLAST of CSPI05G17320 vs. NCBI nr
Match:
XP_008463496.1 (PREDICTED: photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucumis melo])
HSP 1 Score: 464.9 bits (1195), Expect = 4.1e-127
Identity = 228/236 (96.61%), Postives = 232/236 (98.31%), Query Frame = 0
Query: 1 MAVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTINCSIERISRDEGIYNRRPL 60
MAVSTSCLSWVP TASNWKLKLLPFNEP+TATSSFSSSSTINCSIER SRDEGIYNRRPL
Sbjct: 1 MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
Query: 61 LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
LLGVGALATSLLGASPLFA+E+PKNYRAFVD TDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61 LLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGKNYYT 180
LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQK TIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180
Query: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 237
FEYKLSSRAFSRT+FATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
BLAST of CSPI05G17320 vs. NCBI nr
Match:
XP_008463498.1 (PREDICTED: photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 [Cucumis melo])
HSP 1 Score: 458.0 bits (1177), Expect = 5.0e-125
Identity = 227/236 (96.19%), Postives = 231/236 (97.88%), Query Frame = 0
Query: 1 MAVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTINCSIERISRDEGIYNRRPL 60
MAVSTSCLSWVP TASNWKLKLLPFNEP+TATSSFSSSSTINCSIER SRDEGIYNRRPL
Sbjct: 1 MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
Query: 61 LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
LLGVGALATSLLGASPLFA ++PKNYRAFVD TDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61 LLGVGALATSLLGASPLFA-QVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGKNYYT 180
LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQK TIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180
Query: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 237
FEYKLSSRAFSRT+FATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 235
BLAST of CSPI05G17320 vs. NCBI nr
Match:
XP_038889544.1 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Benincasa hispida])
HSP 1 Score: 448.7 bits (1153), Expect = 3.0e-122
Identity = 221/236 (93.64%), Postives = 226/236 (95.76%), Query Frame = 0
Query: 1 MAVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTINCSIERISRDEGIYNRRPL 60
MAVSTSC SWVP TASNWKL+LLPFNEPSTATSSFSS STINCS E+ SR+EG NRRPL
Sbjct: 1 MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATSSFSSCSTINCSTEKTSREEGHCNRRPL 60
Query: 61 LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
LLGVGALATSLL ASPLFAEE+PKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61 LLGVGALATSLLAASPLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGKNYYT 180
LQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQK TIYDMKERTIDG+NYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGSLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYT 180
Query: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 237
FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
BLAST of CSPI05G17320 vs. NCBI nr
Match:
XP_038889545.1 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 [Benincasa hispida])
HSP 1 Score: 441.8 bits (1135), Expect = 3.7e-120
Identity = 220/236 (93.22%), Postives = 225/236 (95.34%), Query Frame = 0
Query: 1 MAVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTINCSIERISRDEGIYNRRPL 60
MAVSTSC SWVP TASNWKL+LLPFNEPSTATSSFSS STINCS E+ SR+EG NRRPL
Sbjct: 1 MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATSSFSSCSTINCSTEKTSREEGHCNRRPL 60
Query: 61 LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
LLGVGALATSLL ASPLFA E+PKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61 LLGVGALATSLLAASPLFA-EVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGKNYYT 180
LQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQK TIYDMKERTIDG+NYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGSLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYT 180
Query: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 237
FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 235
BLAST of CSPI05G17320 vs. TAIR 10
Match:
AT2G39470.2 (PsbP-like protein 2 )
HSP 1 Score: 266.5 bits (680), Expect = 2.0e-71
Identity = 125/182 (68.68%), Postives = 148/182 (81.32%), Query Frame = 0
Query: 55 YNRRPLLLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDS 114
+ RR L+GVG L + + A+ L AEEIPK+Y FVD DGYSYYYPSDWREFDFRAHDS
Sbjct: 49 WKRRQALVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDS 108
Query: 115 AFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTID 174
AFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV LVKH++AAPNQ TIYDMKER D
Sbjct: 109 AFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVED 168
Query: 175 GKNYYTFEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVL 234
GKNYYTFEY L + ++ TSFAT+A+ N RYYTL+VGAN+RRWR+ + L+VVADS ++L
Sbjct: 169 GKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKIL 228
Query: 235 DI 237
I
Sbjct: 229 QI 230
BLAST of CSPI05G17320 vs. TAIR 10
Match:
AT2G39470.1 (PsbP-like protein 2 )
HSP 1 Score: 265.0 bits (676), Expect = 5.8e-71
Identity = 136/236 (57.63%), Postives = 167/236 (70.76%), Query Frame = 0
Query: 2 AVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTINCSIERISRDEG-IYNRRPL 61
++S C + P + K ++L N A SS + S + G + RR
Sbjct: 5 SLSIRCGGFSPTISH--KTEILCPNPSLKACCLLSSGGKADSSESTYQKGSGNNWKRRQA 64
Query: 62 LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 121
L+GVG L + + A+ L AEEIPK+Y FVD DGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 65 LVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDSAFKDRY 124
Query: 122 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGKNYYT 181
LQLQNVRV+FIPTEK DIHE GP++EVV LVKH++AAPNQ TIYDMKER DGKNYYT
Sbjct: 125 LQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVEDGKNYYT 184
Query: 182 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 237
FEY L + ++ TSFAT+A+ N RYYTL+VGAN+RRWR+ + L+VVADS ++L I
Sbjct: 185 FEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 238
BLAST of CSPI05G17320 vs. TAIR 10
Match:
AT2G39470.3 (PsbP-like protein 2 )
HSP 1 Score: 179.9 bits (455), Expect = 2.4e-45
Identity = 85/116 (73.28%), Postives = 96/116 (82.76%), Query Frame = 0
Query: 55 YNRRPLLLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDS 114
+ RR L+GVG L + + A+ L AEEIPK+Y FVD DGYSYYYPSDWREFDFRAHDS
Sbjct: 49 WKRRQALVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDS 108
Query: 115 AFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKE 171
AFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV LVKH++AAPNQ TIYDMKE
Sbjct: 109 AFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKE 164
BLAST of CSPI05G17320 vs. TAIR 10
Match:
AT3G55330.1 (PsbP-like protein 1 )
HSP 1 Score: 146.7 bits (369), Expect = 2.3e-35
Identity = 79/201 (39.30%), Postives = 111/201 (55.22%), Query Frame = 0
Query: 34 SFSSSSTINCSIERISRDEGIYNRRPLLLGVGALATSLLGASPL-FAEEIPKNYRAFVDS 93
S SSSS + +R R + GV A SLL +PL FA E K + A D+
Sbjct: 37 SSSSSSHLQDKCQR---------RLIVTFGVVAPWISLLSRAPLSFAAESKKGFLAVSDN 96
Query: 94 TDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLV 153
D Y++ YP W+E D +KD L++V V +PT K+ I E GP ++ L+
Sbjct: 97 KDAYAFLYPFGWQEVVIEGQDKVYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQIAETLI 156
Query: 154 KHRYAAPNQKTTIYDMKERTIDGKNYYTFEYKLSSRAFSRTSFATIAIANGRYYTLVVGA 213
K A PNQKTT+ D E +DGK YY FE+ + +R ++R + TI + NG +YTL GA
Sbjct: 157 KKVLAPPNQKTTLIDASEHDVDGKTYYQFEFTVQARNYTRHALGTITVFNGNFYTLTTGA 216
Query: 214 NDRRWRRYRDMLKVVADSFRV 234
N+RRW + +D L V DSF++
Sbjct: 217 NERRWEKMKDRLHTVVDSFKI 228
BLAST of CSPI05G17320 vs. TAIR 10
Match:
AT4G15510.1 (Photosystem II reaction center PsbP family protein )
HSP 1 Score: 50.1 bits (118), Expect = 2.9e-06
Identity = 40/176 (22.73%), Postives = 72/176 (40.91%), Query Frame = 0
Query: 86 YRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKD---IHEEG 145
+R ++D+ DGYS+ YP +W + D F+D + +N+ V+F + + + G
Sbjct: 109 FREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYTSLEDLG 168
Query: 146 PLDEVVNFLVKH--------RYAAPNQKTTIYDMKERTIDGKNYYTFEYKLSSRA----- 205
+EV +++ R Q + DGK YY E + S A
Sbjct: 169 SPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSSRVADDGKLYYQVEVNIKSYANNNEL 228
Query: 206 ------------FSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV 234
++R A + + N R Y++ + ++ + L+ V DSFRV
Sbjct: 229 AVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQTPEKVFLEEEKDLRRVMDSFRV 284
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
O80634 | 8.1e-70 | 57.63 | Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis t... | [more] |
P82538 | 3.2e-34 | 39.30 | PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 ... | [more] |
O23403 | 4.1e-05 | 22.73 | PsbP domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KNR7 | 7.3e-130 | 99.58 | PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G505780 PE=4 S... | [more] |
A0A1S3CKZ3 | 2.0e-127 | 96.61 | photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cu... | [more] |
A0A1S3CJF3 | 2.4e-125 | 96.19 | photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 OS=Cu... | [more] |
A0A6J1GN93 | 3.2e-117 | 89.83 | photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cu... | [more] |
A0A6J1JS28 | 4.1e-117 | 89.41 | photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cu... | [more] |
Match Name | E-value | Identity | Description | |
XP_004149826.1 | 1.5e-129 | 99.58 | photosynthetic NDH subunit of lumenal location 1, chloroplastic [Cucumis sativus... | [more] |
XP_008463496.1 | 4.1e-127 | 96.61 | PREDICTED: photosynthetic NDH subunit of lumenal location 1, chloroplastic isofo... | [more] |
XP_008463498.1 | 5.0e-125 | 96.19 | PREDICTED: photosynthetic NDH subunit of lumenal location 1, chloroplastic isofo... | [more] |
XP_038889544.1 | 3.0e-122 | 93.64 | photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Beni... | [more] |
XP_038889545.1 | 3.7e-120 | 93.22 | photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 [Beni... | [more] |