CSPI05G14780 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCGAGTGGTGGTGTGGAACATAATATCCCCATAAAATTCCAACCAGTTTTCCCCCAAAAGCCCACACTATTCTTCCCTTTCTTCCCATGCCATTCCCGGACCGGAAGAACCCAACCCCGACGGAACCCACCGCTGCACACGACGACTTAGCGGCGGTTAAGGCAGCCGCATGGGCCTGGTACCAGCATGGGTCCGGCTCCGAATCCAAGCCGATGCGGGAATTCGGACTCACCAGGCCCATCACTGTCCCCAAGCCATCTCGCTACAGACTCGAAGCCACAAACCGAAGTGATCCAACTATTTTGATTCAGGACAAGTTACAAACACCTACTCCGCATACCAACTCTCTCCTCGACAGCTACGAAATTGCCAGCATTTCTAGACGGTTATCTGACCTTTTAGACCCCAATGATCGCAATAATTTTAGCCTTAGGAGCTTTGAATCTGAGATTATGGATCTAGGACGACAAATTGAGGGGAAAACCACGAAGCCCAACAAATTCAGTGGCTTATGGCGGTGGCGGAGGCGGAAACCGTCGTTGATGTGCGGCAAAATGGAGGATGTGGTTCTTGCCACCCAAAAACATCACCGCCGGCCCATGCCACGGTGGACCTAAGCTAGCTAAGCCCGCCCTAAGGTTAGTTAGTTCTTCACTCATCTGCCATTTTTGTGTTTTTACGTTAAAATTTTGGTTAAATGGTTACCTTAAATTTGATTGAAGTTTCAAACTTTTTAGCTTTAAATACTTCCGGTTGATATATTAATTTTGGGTAGAATACGTTACTTTATTAATCGTTTTAGTTTATGGTCTTTTAATAGGTCGGAATTTATGCCCATTTCTTAGGCGTTTTCTTGAGAGAAAAAAGAAATTGAGCTCGCTCTTAAAATCTAAAAATTATAAAGCATGTTTTCAAAAACCTATTCTTTCTTTTTATTTTTTTTAGTTTTTCAGAACTTTTTAAAATTTTTGCGAACATTATAGGAAGTAGACAATATGTATAAAAAAAAAATTGAGAGAGAAGTAAGAGTTTTAGAAATTTAATTTTCAAATAAAAAAAACGACAAACAAAATAGTTATTATAAATGGGGTTATAGAAAATAAGCTTTTGGTTTCCATAACAATATTTTGCAAAATTTGTAAAATAATTTTTATACACAATTTACAAATTTTGGAGGTTTCAGTTTTGTTGGTCAACAGTTTGGTATGTTAATTGTATAAAAGAAAAAAAAAATAGTTAGATATTGAATACACATAATAGGAATAATAATTAAAATAAAATTAGTTAGGTTAAAATGTTGTTGGGTTGTTGGATTTTGTGAAGGAAAATTTTGGAATGGGCGAAAGGGCGCAAGGGCGGAAGGGCGAGGAGAGGGTGTGATTCCCCAATCGTCACATCGTGAAGCGGGGGAGTTAATACGGCCTTACAACATGTTAATTGTTAGGTATACTCATTTATTTTTGTATTTATTAACTTTACCACACAACAAACATCACATACCATTTCCTTTCTTACTCTCATTTTCATTCTCTTTTTCCCCTTTTCTTATCTACTCTCTAACACTACAAAATATGTTGTTGATTGAAAAATA ACCGAGTGGTGGTGTGGAACATAATATCCCCATAAAATTCCAACCAGTTTTCCCCCAAAAGCCCACACTATTCTTCCCTTTCTTCCCATGCCATTCCCGGACCGGAAGAACCCAACCCCGACGGAACCCACCGCTGCACACGACGACTTAGCGGCGGTTAAGGCAGCCGCATGGGCCTGGTACCAGCATGGGTCCGGCTCCGAATCCAAGCCGATGCGGGAATTCGGACTCACCAGGCCCATCACTGTCCCCAAGCCATCTCGCTACAGACTCGAAGCCACAAACCGAAGTGATCCAACTATTTTGATTCAGGACAAGTTACAAACACCTACTCCGCATACCAACTCTCTCCTCGACAGCTACGAAATTGCCAGCATTTCTAGACGGTTATCTGACCTTTTAGACCCCAATGATCGCAATAATTTTAGCCTTAGGAGCTTTGAATCTGAGATTATGGATCTAGGACGACAAATTGAGGGGAAAACCACGAAGCCCAACAAATTCAGTGGCTTATGGCGGTGGCGGAGGCGGAAACCGTCGTTGATGTGCGGCAAAATGGAGGATGTGGTTCTTGCCACCCAAAAACATCACCGCCGGCCCATGCCACGGTGGACCTAAGCTAGCTAAGCCCGCCCTAAGGAAAATTTTGGAATGGGCGAAAGGGCGCAAGGGCGGAAGGGCGAGGAGAGGGTGTGATTCCCCAATCGTCACATCGTGAAGCGGGGGAGTTAATACGGCCTTACAACATGTTAATTGTTAGGTATACTCATTTATTTTTGTATTTATTAACTTTACCACACAACAAACATCACATACCATTTCCTTTCTTACTCTCATTTTCATTCTCTTTTTCCCCTTTTCTTATCTACTCTCTAACACTACAAAATATGTTGTTGATTGAAAAATA ATGCCATTCCCGGACCGGAAGAACCCAACCCCGACGGAACCCACCGCTGCACACGACGACTTAGCGGCGGTTAAGGCAGCCGCATGGGCCTGGTACCAGCATGGGTCCGGCTCCGAATCCAAGCCGATGCGGGAATTCGGACTCACCAGGCCCATCACTGTCCCCAAGCCATCTCGCTACAGACTCGAAGCCACAAACCGAAGTGATCCAACTATTTTGATTCAGGACAAGTTACAAACACCTACTCCGCATACCAACTCTCTCCTCGACAGCTACGAAATTGCCAGCATTTCTAGACGGTTATCTGACCTTTTAGACCCCAATGATCGCAATAATTTTAGCCTTAGGAGCTTTGAATCTGAGATTATGGATCTAGGACGACAAATTGAGGGGAAAACCACGAAGCCCAACAAATTCAGTGGCTTATGGCGGTGGCGGAGGCGGAAACCGTCGTTGATGTGCGGCAAAATGGAGGATGTGGTTCTTGCCACCCAAAAACATCACCGCCGGCCCATGCCACGGTGGACCTAA MPFPDRKNPTPTEPTAAHDDLAAVKAAAWAWYQHGSGSESKPMREFGLTRPITVPKPSRYRLEATNRSDPTILIQDKLQTPTPHTNSLLDSYEIASISRRLSDLLDPNDRNNFSLRSFESEIMDLGRQIEGKTTKPNKFSGLWRWRRRKPSLMCGKMEDVVLATQKHHRRPMPRWT* Homology
BLAST of CSPI05G14780 vs. ExPASy TrEMBL
Match: A0A0A0KTL9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G410720 PE=4 SV=1) HSP 1 Score: 365.2 bits (936), Expect = 1.6e-97 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
BLAST of CSPI05G14780 vs. ExPASy TrEMBL
Match: A0A5D3DS63 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002400 PE=4 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 2.4e-85 Identity = 158/175 (90.29%), Postives = 167/175 (95.43%), Query Frame = 0
BLAST of CSPI05G14780 vs. ExPASy TrEMBL
Match: A0A1S4E2U9 (uncharacterized protein LOC103499304 OS=Cucumis melo OX=3656 GN=LOC103499304 PE=4 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 2.4e-85 Identity = 158/175 (90.29%), Postives = 167/175 (95.43%), Query Frame = 0
BLAST of CSPI05G14780 vs. ExPASy TrEMBL
Match: A0A6J1H668 (uncharacterized protein LOC111460520 OS=Cucurbita moschata OX=3662 GN=LOC111460520 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 9.4e-58 Identity = 118/162 (72.84%), Postives = 131/162 (80.86%), Query Frame = 0
BLAST of CSPI05G14780 vs. ExPASy TrEMBL
Match: A0A6J1JUC6 (uncharacterized protein LOC111487585 OS=Cucurbita maxima OX=3661 GN=LOC111487585 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 2.1e-57 Identity = 118/163 (72.39%), Postives = 132/163 (80.98%), Query Frame = 0
BLAST of CSPI05G14780 vs. NCBI nr
Match: KAE8648421.1 (hypothetical protein Csa_008961 [Cucumis sativus]) HSP 1 Score: 328.6 bits (841), Expect = 3.4e-86 Identity = 161/173 (93.06%), Postives = 163/173 (94.22%), Query Frame = 0
BLAST of CSPI05G14780 vs. NCBI nr
Match: XP_016902559.1 (PREDICTED: uncharacterized protein LOC103499304 [Cucumis melo] >KAA0062372.1 uncharacterized protein E6C27_scaffold154G001470 [Cucumis melo var. makuwa] >TYK26607.1 uncharacterized protein E5676_scaffold313G002400 [Cucumis melo var. makuwa]) HSP 1 Score: 324.7 bits (831), Expect = 4.9e-85 Identity = 158/175 (90.29%), Postives = 167/175 (95.43%), Query Frame = 0
BLAST of CSPI05G14780 vs. NCBI nr
Match: XP_011656214.2 (uncharacterized protein LOC105435673 [Cucumis sativus]) HSP 1 Score: 278.5 bits (711), Expect = 4.0e-71 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of CSPI05G14780 vs. NCBI nr
Match: XP_038906944.1 (uncharacterized protein LOC120092810 [Benincasa hispida]) HSP 1 Score: 275.8 bits (704), Expect = 2.6e-70 Identity = 140/179 (78.21%), Postives = 149/179 (83.24%), Query Frame = 0
BLAST of CSPI05G14780 vs. NCBI nr
Match: KAG7032736.1 (hypothetical protein SDJN02_06786, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 236.1 bits (601), Expect = 2.3e-58 Identity = 121/163 (74.23%), Postives = 132/163 (80.98%), Query Frame = 0
BLAST of CSPI05G14780 vs. TAIR 10
Match: AT5G37550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G66190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 80.1 bits (196), Expect = 2.0e-15 Identity = 64/171 (37.43%), Postives = 86/171 (50.29%), Query Frame = 0
BLAST of CSPI05G14780 vs. TAIR 10
Match: AT1G66190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G37550.1); Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 7; Plants - 19; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 68.2 bits (165), Expect = 7.7e-12 Identity = 44/103 (42.72%), Postives = 62/103 (60.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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