|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCAGCGCTTCGCGAAGAGAGGCAAATCGGAGTGGTAACAAACCACCTGATTCCAATCTATATGGCGCGACGCAGCATGGAGACTGTGACATTAACGGAACCAGAAGCAAAGACCCGCACGAGAGGGAGTTGTGCGCGAACGGGACGTGACGCTCGGTGCTCAGCTTGCGTGATCCGAATGATGGAAGGCTTCGCTTCTGATGAACGCGAGTGGCTCGGCTAA mRNA sequence ATGGCAGCGCTTCGCGAAGAGAGGCAAATCGGAGTGGTAACAAACCACCTGATTCCAATCTATATGGCGCGACGCAGCATGGAGACTGTGACATTAACGGAACCAGAAGCAAAGACCCGCACGAGAGGGAGTTGTGCGCGAACGGGACGTGACGCTCGGTGCTCAGCTTGCGTGATCCGAATGATGGAAGGCTTCGCTTCTGATGAACGCGAGTGGCTCGGCTAA Coding sequence (CDS) ATGGCAGCGCTTCGCGAAGAGAGGCAAATCGGAGTGGTAACAAACCACCTGATTCCAATCTATATGGCGCGACGCAGCATGGAGACTGTGACATTAACGGAACCAGAAGCAAAGACCCGCACGAGAGGGAGTTGTGCGCGAACGGGACGTGACGCTCGGTGCTCAGCTTGCGTGATCCGAATGATGGAAGGCTTCGCTTCTGATGAACGCGAGTGGCTCGGCTAA Protein sequence MAALREERQIGVVTNHLIPIYMARRSMETVTLTEPEAKTRTRGSCARTGRDARCSACVIRMMEGFASDEREWLG*
Homology
BLAST of CSPI05G13170 vs. ExPASy TrEMBL
Match: A0A0A0KMM8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G318410 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 3.4e-33 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
Query: 1 MAALREERQIGVVTNHLIPIYMARRSMETVTLTEPEAKTRTRGSCARTGRDARCSACVIR 60
MAALREERQIGVVTNHLIPIYMARRSMETVTLTEPEAKTRTRGSCARTGRDARCSACVIR
Sbjct: 1 MAALREERQIGVVTNHLIPIYMARRSMETVTLTEPEAKTRTRGSCARTGRDARCSACVIR 60
Query: 61 MMEGFASDEREWLG 75
MMEGFASDEREWLG
Sbjct: 61 MMEGFASDEREWLG 74
BLAST of CSPI05G13170 vs. NCBI nr
Match: KGN50900.1 (hypothetical protein Csa_023119 [Cucumis sativus]) HSP 1 Score: 150.2 bits (378), Expect = 7.0e-33 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
Query: 1 MAALREERQIGVVTNHLIPIYMARRSMETVTLTEPEAKTRTRGSCARTGRDARCSACVIR 60
MAALREERQIGVVTNHLIPIYMARRSMETVTLTEPEAKTRTRGSCARTGRDARCSACVIR
Sbjct: 1 MAALREERQIGVVTNHLIPIYMARRSMETVTLTEPEAKTRTRGSCARTGRDARCSACVIR 60
Query: 61 MMEGFASDEREWLG 75
MMEGFASDEREWLG
Sbjct: 61 MMEGFASDEREWLG 74
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KMM8 | 3.4e-33 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G318410 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN50900.1 | 7.0e-33 | 100.00 | hypothetical protein Csa_023119 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
|
