CSPI05G13170 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G13170
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr5: 12736038 .. 12736262 (+)
RNA-Seq ExpressionCSPI05G13170
SyntenyCSPI05G13170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCGCTTCGCGAAGAGAGGCAAATCGGAGTGGTAACAAACCACCTGATTCCAATCTATATGGCGCGACGCAGCATGGAGACTGTGACATTAACGGAACCAGAAGCAAAGACCCGCACGAGAGGGAGTTGTGCGCGAACGGGACGTGACGCTCGGTGCTCAGCTTGCGTGATCCGAATGATGGAAGGCTTCGCTTCTGATGAACGCGAGTGGCTCGGCTAA

mRNA sequence

ATGGCAGCGCTTCGCGAAGAGAGGCAAATCGGAGTGGTAACAAACCACCTGATTCCAATCTATATGGCGCGACGCAGCATGGAGACTGTGACATTAACGGAACCAGAAGCAAAGACCCGCACGAGAGGGAGTTGTGCGCGAACGGGACGTGACGCTCGGTGCTCAGCTTGCGTGATCCGAATGATGGAAGGCTTCGCTTCTGATGAACGCGAGTGGCTCGGCTAA

Coding sequence (CDS)

ATGGCAGCGCTTCGCGAAGAGAGGCAAATCGGAGTGGTAACAAACCACCTGATTCCAATCTATATGGCGCGACGCAGCATGGAGACTGTGACATTAACGGAACCAGAAGCAAAGACCCGCACGAGAGGGAGTTGTGCGCGAACGGGACGTGACGCTCGGTGCTCAGCTTGCGTGATCCGAATGATGGAAGGCTTCGCTTCTGATGAACGCGAGTGGCTCGGCTAA

Protein sequence

MAALREERQIGVVTNHLIPIYMARRSMETVTLTEPEAKTRTRGSCARTGRDARCSACVIRMMEGFASDEREWLG*
Homology
[Close]
BLAST of CSPI05G13170 vs. ExPASy TrEMBL
Match: A0A0A0KMM8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G318410 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.4e-33
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MAALREERQIGVVTNHLIPIYMARRSMETVTLTEPEAKTRTRGSCARTGRDARCSACVIR 60
          MAALREERQIGVVTNHLIPIYMARRSMETVTLTEPEAKTRTRGSCARTGRDARCSACVIR
Sbjct: 1  MAALREERQIGVVTNHLIPIYMARRSMETVTLTEPEAKTRTRGSCARTGRDARCSACVIR 60

Query: 61 MMEGFASDEREWLG 75
          MMEGFASDEREWLG
Sbjct: 61 MMEGFASDEREWLG 74

[Close]
BLAST of CSPI05G13170 vs. NCBI nr
Match: KGN50900.1 (hypothetical protein Csa_023119 [Cucumis sativus])

HSP 1 Score: 150.2 bits (378), Expect = 7.0e-33
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MAALREERQIGVVTNHLIPIYMARRSMETVTLTEPEAKTRTRGSCARTGRDARCSACVIR 60
          MAALREERQIGVVTNHLIPIYMARRSMETVTLTEPEAKTRTRGSCARTGRDARCSACVIR
Sbjct: 1  MAALREERQIGVVTNHLIPIYMARRSMETVTLTEPEAKTRTRGSCARTGRDARCSACVIR 60

Query: 61 MMEGFASDEREWLG 75
          MMEGFASDEREWLG
Sbjct: 61 MMEGFASDEREWLG 74

The following BLAST results are available for this feature:
BLAST of CSPI05G13170 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI05G13170 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMM83.4e-33100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G318410 PE=4 SV=1[more]
BLAST of CSPI05G13170 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50900.17.0e-33100.00hypothetical protein Csa_023119 [Cucumis sativus][more]
BLAST of CSPI05G13170 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G13170.1CSPI05G13170.1mRNA