CSPI05G07720 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G07720
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr5: 6617323 .. 6619314 (-)
RNA-Seq Expression	CSPI05G07720
Synteny	CSPI05G07720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAAGATCCAACTCCCATGGCGGAACCAACTAACTTAAAACGATCTTGCGGCTTTCACTTTCCTTTCATCCCCATTTGAAACGCATCGCAATTTTCTCTTTTCTGATCTTCACTTTCCTTTCTAAATTCAATGGTTCCCGCCATTTAGGATTGTCCCCAGGATCTTGTTTTCCTGTTTGTGGGCTTCAAATTCTTCTACAACCAACCCCAGGGTCATGAGCTTAGCTCCTTCCCTGTTCTCGCGGCAGCATTTAAACACTTCCTCCAAAAATCTTTACTTTGCCATATCTTCAGACCAAGCAAAACTACTTTCTCTATTGGAATCCTGCAATGGGACTTCAAAAATCTCCCAAATCCACTGCTACATGGTCAAGACTGCTCTTGATCTCGACCCTTTTACGTTGAGCAAACTTCTTGCTTCTGCCATATTAGATATCAAGTATGCAGCTTCCATTTTCAGGGAGATACGAAACCCAAATCTCTTTATGTTCAATACTATGCTACGAGGCTATTCTAATAGCAATGATTCAAAACAAGCTTTTGTTATTTTCAACGACCTTAGGAATCAGGACTTTTTGCCTGATCGGTTTTCTTTTATAACAACTCTTAAAGCTTGTGCTCGTGAATTGGCAATTCATGTTGGAAAGGGAATTCATGGGATTGTTCATAAATCTGGGCATGGTTTATTCAATGATGTTAACAATATAATTCTACATTTTTACGGTGCTTGTGAGCAAATTAAAGATGCCCATAAACTGTTTGATGAAATTTCTCAAAGAAATGATTTGGTTTCATGGAACACTTTGATGGATGGTTATCTTCGTGCATCTCAGCCCATTGTTGTTTTAGATACTTTTAGACAAATGTGTAGGAGAGGTTTGATAGCCAATACGGGTACACTTTTATCTGTTGCATCTGCTGTGGGTGATGTTGGCAATACCATGGACGGAAGGTCTCTTTACGGACATTGTATCAAGTTGGGTTTAGGTTCTAATCTCCGTGTAGTTACATGTTTGATTGATATGTATGGAAAGTTTGGTGATTTGGACGAAGCAGGAACTATTTTTAATGAAGTTGCTGAGAAAGATGTTATTGTGTGGAACTGTTTGATAGATAACTATGCTAAAAACGGGTTGATAAAAAAAGCAGTAGCTTCATTACATCTCATGAAACATGAAGGAATGAAACCCAATTCATCCACATTGGCAGGCTTAATCTCAGCTTGTGCTATCTCTGGTGCTGTCAGTCCAGGTAAATACCTTGCCAATTATGCAGATAATGAAGGATTGGATCTAGATGTCGTTCTTGGAACGACTCTAATTAGTATGTATGCTAAATTTGGGTTCCTAGACAAGGCGATTGACATTTTTGATAAGATGAAGGATAAGGATGTAAAAACTTGGACGGCAATGATAACTGGTTACGGAGATCATGGGCAGACAAGGAAGGTTATGGAAACTTTGTATAGGATGGAGGAGGAGGGTTTTCGGCCAAATGAGATAACATTCTTGGCAGTCTTGAATGCTTATAGTCATGGAGGCATAGTGGCAGAGGGGATGAAATGTTTCAAAAGAATGGTGTATGAATATGGGATAACACCAAAGATTGAGCACTATGGATGTATTATTGATCTTCTTGGCCGTGCAGGGTTGTTGGAGGAAGCTCATAAGCTAATAAAGAGCTTGCCTTCGACGAAGGGTGATATTACCGGATGGCGTACACTGCTGGCAGCTTGTAGGGTTTATGGAGATGTTGAATTGGGAGAGACTGTGAAGAGGAAGCTGGTTGATTTAAATGATGAACACCCCGCGGATTCAATGCTGCTTTCTAGCACTTATGCCATTGCTGGGAGGTTGTCTGATTATACACAATATCAACTAAGGAAGGAAGGAAACAAAGTGAAAGAAGCAAATGGATCATCTCAAGTGCAGATTGAGAAAGCAAAAAAGGAAGCTGGTTGTAGTGTGATTGAGATGGAGAGTTTGTATTAG

mRNA sequence

GTGAAGATCCAACTCCCATGGCGGAACCAACTAACTTAAAACGATCTTGCGGCTTTCACTTTCCTTTCATCCCCATTTGAAACGCATCGCAATTTTCTCTTTTCTGATCTTCACTTTCCTTTCTAAATTCAATGGTTCCCGCCATTTAGGATTGTCCCCAGGATCTTGTTTTCCTGTTTGTGGGCTTCAAATTCTTCTACAACCAACCCCAGGGTCATGAGCTTAGCTCCTTCCCTGTTCTCGCGGCAGCATTTAAACACTTCCTCCAAAAATCTTTACTTTGCCATATCTTCAGACCAAGCAAAACTACTTTCTCTATTGGAATCCTGCAATGGGACTTCAAAAATCTCCCAAATCCACTGCTACATGGTCAAGACTGCTCTTGATCTCGACCCTTTTACGTTGAGCAAACTTCTTGCTTCTGCCATATTAGATATCAAGTATGCAGCTTCCATTTTCAGGGAGATACGAAACCCAAATCTCTTTATGTTCAATACTATGCTACGAGGCTATTCTAATAGCAATGATTCAAAACAAGCTTTTGTTATTTTCAACGACCTTAGGAATCAGGACTTTTTGCCTGATCGGTTTTCTTTTATAACAACTCTTAAAGCTTGTGCTCGTGAATTGGCAATTCATGTTGGAAAGGGAATTCATGGGATTGTTCATAAATCTGGGCATGGTTTATTCAATGATGTTAACAATATAATTCTACATTTTTACGGTGCTTGTGAGCAAATTAAAGATGCCCATAAACTGTTTGATGAAATTTCTCAAAGAAATGATTTGGTTTCATGGAACACTTTGATGGATGGTTATCTTCGTGCATCTCAGCCCATTGTTGTTTTAGATACTTTTAGACAAATGTGTAGGAGAGGTTTGATAGCCAATACGGGTACACTTTTATCTGTTGCATCTGCTGTGGGTGATGTTGGCAATACCATGGACGGAAGGTCTCTTTACGGACATTGTATCAAGTTGGGTTTAGGTTCTAATCTCCGTGTAGTTACATGTTTGATTGATATGTATGGAAAGTTTGGTGATTTGGACGAAGCAGGAACTATTTTTAATGAAGTTGCTGAGAAAGATGTTATTGTGTGGAACTGTTTGATAGATAACTATGCTAAAAACGGGTTGATAAAAAAAGCAGTAGCTTCATTACATCTCATGAAACATGAAGGAATGAAACCCAATTCATCCACATTGGCAGGCTTAATCTCAGCTTGTGCTATCTCTGGTGCTGTCAGTCCAGGTAAATACCTTGCCAATTATGCAGATAATGAAGGATTGGATCTAGATGTCGTTCTTGGAACGACTCTAATTAGTATGTATGCTAAATTTGGGTTCCTAGACAAGGCGATTGACATTTTTGATAAGATGAAGGATAAGGATGTAAAAACTTGGACGGCAATGATAACTGGTTACGGAGATCATGGGCAGACAAGGAAGGTTATGGAAACTTTGTATAGGATGGAGGAGGAGGGTTTTCGGCCAAATGAGATAACATTCTTGGCAGTCTTGAATGCTTATAGTCATGGAGGCATAGTGGCAGAGGGGATGAAATGTTTCAAAAGAATGGTGTATGAATATGGGATAACACCAAAGATTGAGCACTATGGATGTATTATTGATCTTCTTGGCCGTGCAGGGTTGTTGGAGGAAGCTCATAAGCTAATAAAGAGCTTGCCTTCGACGAAGGGTGATATTACCGGATGGCGTACACTGCTGGCAGCTTGTAGGGTTTATGGAGATGTTGAATTGGGAGAGACTGTGAAGAGGAAGCTGGTTGATTTAAATGATGAACACCCCGCGGATTCAATGCTGCTTTCTAGCACTTATGCCATTGCTGGGAGGTTGTCTGATTATACACAATATCAACTAAGGAAGGAAGGAAACAAAGTGAAAGAAGCAAATGGATCATCTCAAGTGCAGATTGAGAAAGCAAAAAAGGAAGCTGGTTGTAGTGTGATTGAGATGGAGAGTTTGTATTAG

Coding sequence (CDS)

ATGAGCTTAGCTCCTTCCCTGTTCTCGCGGCAGCATTTAAACACTTCCTCCAAAAATCTTTACTTTGCCATATCTTCAGACCAAGCAAAACTACTTTCTCTATTGGAATCCTGCAATGGGACTTCAAAAATCTCCCAAATCCACTGCTACATGGTCAAGACTGCTCTTGATCTCGACCCTTTTACGTTGAGCAAACTTCTTGCTTCTGCCATATTAGATATCAAGTATGCAGCTTCCATTTTCAGGGAGATACGAAACCCAAATCTCTTTATGTTCAATACTATGCTACGAGGCTATTCTAATAGCAATGATTCAAAACAAGCTTTTGTTATTTTCAACGACCTTAGGAATCAGGACTTTTTGCCTGATCGGTTTTCTTTTATAACAACTCTTAAAGCTTGTGCTCGTGAATTGGCAATTCATGTTGGAAAGGGAATTCATGGGATTGTTCATAAATCTGGGCATGGTTTATTCAATGATGTTAACAATATAATTCTACATTTTTACGGTGCTTGTGAGCAAATTAAAGATGCCCATAAACTGTTTGATGAAATTTCTCAAAGAAATGATTTGGTTTCATGGAACACTTTGATGGATGGTTATCTTCGTGCATCTCAGCCCATTGTTGTTTTAGATACTTTTAGACAAATGTGTAGGAGAGGTTTGATAGCCAATACGGGTACACTTTTATCTGTTGCATCTGCTGTGGGTGATGTTGGCAATACCATGGACGGAAGGTCTCTTTACGGACATTGTATCAAGTTGGGTTTAGGTTCTAATCTCCGTGTAGTTACATGTTTGATTGATATGTATGGAAAGTTTGGTGATTTGGACGAAGCAGGAACTATTTTTAATGAAGTTGCTGAGAAAGATGTTATTGTGTGGAACTGTTTGATAGATAACTATGCTAAAAACGGGTTGATAAAAAAAGCAGTAGCTTCATTACATCTCATGAAACATGAAGGAATGAAACCCAATTCATCCACATTGGCAGGCTTAATCTCAGCTTGTGCTATCTCTGGTGCTGTCAGTCCAGGTAAATACCTTGCCAATTATGCAGATAATGAAGGATTGGATCTAGATGTCGTTCTTGGAACGACTCTAATTAGTATGTATGCTAAATTTGGGTTCCTAGACAAGGCGATTGACATTTTTGATAAGATGAAGGATAAGGATGTAAAAACTTGGACGGCAATGATAACTGGTTACGGAGATCATGGGCAGACAAGGAAGGTTATGGAAACTTTGTATAGGATGGAGGAGGAGGGTTTTCGGCCAAATGAGATAACATTCTTGGCAGTCTTGAATGCTTATAGTCATGGAGGCATAGTGGCAGAGGGGATGAAATGTTTCAAAAGAATGGTGTATGAATATGGGATAACACCAAAGATTGAGCACTATGGATGTATTATTGATCTTCTTGGCCGTGCAGGGTTGTTGGAGGAAGCTCATAAGCTAATAAAGAGCTTGCCTTCGACGAAGGGTGATATTACCGGATGGCGTACACTGCTGGCAGCTTGTAGGGTTTATGGAGATGTTGAATTGGGAGAGACTGTGAAGAGGAAGCTGGTTGATTTAAATGATGAACACCCCGCGGATTCAATGCTGCTTTCTAGCACTTATGCCATTGCTGGGAGGTTGTCTGATTATACACAATATCAACTAAGGAAGGAAGGAAACAAAGTGAAAGAAGCAAATGGATCATCTCAAGTGCAGATTGAGAAAGCAAAAAAGGAAGCTGGTTGTAGTGTGATTGAGATGGAGAGTTTGTATTAG

Protein sequence

MSLAPSLFSRQHLNTSSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDPFTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQDFLPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNIILHFYGACEQIKDAHKLFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDVGNTMDGRSLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLIDNYAKNGLIKKAVASLHLMKHEGMKPNSSTLAGLISACAISGAVSPGKYLANYADNEGLDLDVVLGTTLISMYAKFGFLDKAIDIFDKMKDKDVKTWTAMITGYGDHGQTRKVMETLYRMEEEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLLEEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPADSMLLSSTYAIAGRLSDYTQYQLRKEGNKVKEANGSSQVQIEKAKKEAGCSVIEMESLY*

Homology

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BLAST of CSPI05G07720 vs. ExPASy Swiss-Prot
Match: Q9ZVG8 (Pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E54 PE=2 SV=1)

HSP 1 Score: 584.7 bits (1506), Expect = 1.2e-165
Identity = 295/577 (51.13%), Postives = 405/577 (70.19%), Query Frame = 0


Query: 1   MSLAPSLFSRQHLNTSSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDP 60
           M+LA +   R++     +NL   +S    KL++ L SC  T ++S+IH YMVKT LD D 
Sbjct: 1   MTLAITSRLRRNFVFRRRNLESLLSPQCQKLINDLRSCRDTVEVSRIHGYMVKTGLDKDD 60

Query: 61  FTLSKLLA-SAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQD 120
           F +SKLLA S++LDI+YA+SIF  + N NLFMFNTM+RGYS S++ ++AF +FN LR + 
Sbjct: 61  FAVSKLLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKG 120

Query: 121 FLPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNIILHFYGACEQIKDAH 180
              DRFSFITTLK+C+REL + +G+G+HGI  +SG  +F D+ N ++HFY  C +I DA 
Sbjct: 121 LTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDAR 180

Query: 181 KLFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDV 240
           K+FDE+ Q  D V+++TLM+GYL+ S+  + LD FR M +  ++ N  TLLS  SA+ D+
Sbjct: 181 KVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDL 240

Query: 241 GNTMDGRSLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLI 300
           G+     S +  CIK+GL  +L ++T LI MYGK G +  A  IF+    KDV+ WNC+I
Sbjct: 241 GDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMI 300

Query: 301 DNYAKNGLIKKAVASLHLMKHEGMKPNSSTLAGLISACAISGAVSPGKYLANYADNEGLD 360
           D YAK GL+++ V  L  MK+E MKPNSST  GL+S+CA S A   G+ +A+  + E + 
Sbjct: 301 DQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIA 360

Query: 361 LDVVLGTTLISMYAKFGFLDKAIDIFDKMKDKDVKTWTAMITGYGDHGQTRKVMETLYRM 420
           LD +LGT L+ MYAK G L+KA++IF++MKDKDVK+WTAMI+GYG HG  R+ +    +M
Sbjct: 361 LDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKM 420

Query: 421 EEEG--FRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRA 480
           EEE    RPNEITFL VLNA SHGG+V EG++CFKRMV  Y  TPK+EHYGC++DLLGRA
Sbjct: 421 EEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRA 480

Query: 481 GLLEEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPADSMLL 540
           G LEEA++LI++LP T  D T WR LLAACRVYG+ +LGE+V  +L ++ + HPAD++LL
Sbjct: 481 GQLEEAYELIRNLPIT-SDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILL 540

Query: 541 SSTYAIAGRLSDYTQYQLRKEGNKVKEANGSSQVQIE 575
           + T+A+AG      +  L  E NK ++  G S ++IE
Sbjct: 541 AGTHAVAGN----PEKSLDNELNKGRKEAGYSAIEIE 572

[Close]

BLAST of CSPI05G07720 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 3.8e-92
Identity = 202/616 (32.79%), Postives = 327/616 (53.08%), Query Frame = 0


Query: 1   MSLAPSLFSRQHLNTSSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDP 60
           +++  S +    L +SS   Y +I +  +  LSLL +C     +  IH  M+K  L    
Sbjct: 8   LTVPSSSYPFHFLPSSSDPPYDSIRNHPS--LSLLHNCKTLQSLRIIHAQMIKIGLHNTN 67

Query: 61  FTLSKLLASAILD-----IKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDL 120
           + LSKL+   IL      + YA S+F+ I+ PNL ++NTM RG++ S+D   A  ++  +
Sbjct: 68  YALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCM 127

Query: 121 RNQDFLPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNIILHFYGACEQI 180
            +   LP+ ++F   LK+CA+  A   G+ IHG V K G  L   V+  ++  Y    ++
Sbjct: 128 ISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRL 187

Query: 181 KDAHKLFDEISQRN------------------------------DLVSWNTLMDGYLRAS 240
           +DAHK+FD+   R+                              D+VSWN ++ GY    
Sbjct: 188 EDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETG 247

Query: 241 QPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDVGNTMDGRSLYGHCIKLGLGSNLRVVT 300
                L+ F+ M +  +  +  T+++V SA    G+   GR ++      G GSNL++V 
Sbjct: 248 NYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVN 307

Query: 301 CLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLIDNYAKNGLIKKAVASLHLMKHEGMKP 360
            LID+Y K G+L+ A  +F  +  KDVI WN LI  Y    L K+A+     M   G  P
Sbjct: 308 ALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 367

Query: 361 NSSTLAGLISACAISGAVSPGKYLANYADN--EGLDLDVVLGTTLISMYAKFGFLDKAID 420
           N  T+  ++ ACA  GA+  G+++  Y D   +G+     L T+LI MYAK G ++ A  
Sbjct: 368 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ 427

Query: 421 IFDKMKDKDVKTWTAMITGYGDHGQTRKVMETLYRMEEEGFRPNEITFLAVLNAYSHGGI 480
           +F+ +  K + +W AMI G+  HG+     +   RM + G +P++ITF+ +L+A SH G+
Sbjct: 428 VFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGM 487

Query: 481 VAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLLEEAHKLIKSLPSTKGDITGWRTL 540
           +  G   F+ M  +Y +TPK+EHYGC+IDLLG +GL +EA ++I ++   + D   W +L
Sbjct: 488 LDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI-NMMEMEPDGVIWCSL 547

Query: 541 LAACRVYGDVELGETVKRKLVDLNDEHPADSMLLSSTYAIAGRLSDYTQYQLRKEGNKVK 580
           L AC+++G+VELGE+    L+ +  E+P   +LLS+ YA AGR ++  + +       +K
Sbjct: 548 LKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMK 607

[Close]

BLAST of CSPI05G07720 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.3e-87
Identity = 191/626 (30.51%), Postives = 334/626 (53.35%), Query Frame = 0


Query: 2   SLAPSLFSRQHLNTSSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDPF 61
           S A  L   +H N S+ N     ++++++ +SL+E C    ++ Q H +M++T    DP+
Sbjct: 5   STAQPLSLPRHPNFSNPN-QPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPY 64

Query: 62  TLSKLLASAIL----DIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRN 121
           + SKL A A L     ++YA  +F EI  PN F +NT++R Y++  D   +   F D+ +
Sbjct: 65  SASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVS 124

Query: 122 Q-DFLPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNIILHFYGACEQIK 181
           +    P++++F   +KA A   ++ +G+ +HG+  KS  G    V N ++H Y +C  + 
Sbjct: 125 ESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLD 184

Query: 182 DAHKLFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLLSVASAV 241
            A K+F  I ++ D+VSWN++++G+++   P   L+ F++M    + A+  T++ V SA 
Sbjct: 185 SACKVFTTIKEK-DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSAC 244

Query: 242 GDVGNTMDGRSLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIF------------ 301
             + N   GR +  +  +  +  NL +   ++DMY K G +++A  +F            
Sbjct: 245 AKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWT 304

Query: 302 -------------------NEVAEKDVIVWNCLIDNYAKNGLIKKAVASLH-LMKHEGMK 361
                              N + +KD++ WN LI  Y +NG   +A+   H L   + MK
Sbjct: 305 TMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMK 364

Query: 362 PNSSTLAGLISACAISGAVSPGKYLANYADNEGLDLDVVLGTTLISMYAKFGFLDKAIDI 421
            N  TL   +SACA  GA+  G+++ +Y    G+ ++  + + LI MY+K G L+K+ ++
Sbjct: 365 LNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREV 424

Query: 422 FDKMKDKDVKTWTAMITGYGDHGQTRKVMETLYRMEEEGFRPNEITFLAVLNAYSHGGIV 481
           F+ ++ +DV  W+AMI G   HG   + ++  Y+M+E   +PN +TF  V  A SH G+V
Sbjct: 425 FNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLV 484

Query: 482 AEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLLEEAHKLIKSLPSTKGDITGWRTLL 541
            E    F +M   YGI P+ +HY CI+D+LGR+G LE+A K I+++P      + W  LL
Sbjct: 485 DEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMP-IPPSTSVWGALL 544

Query: 542 AACRVYGDVELGETVKRKLVDLNDEHPADSMLLSSTYAIAGRLSDYTQYQLRKEGNKVKE 591
            AC+++ ++ L E    +L++L   +    +LLS+ YA  G+  + +  +LRK       
Sbjct: 545 GACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVS--ELRK------- 604

[Close]

BLAST of CSPI05G07720 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 4.5e-85
Identity = 170/544 (31.25%), Postives = 304/544 (55.88%), Query Frame = 0


Query: 33  SLLESCNGTSKISQIHCYMVKTALDLDPFTLSKLL--ASAILDIKYAASIFREIRNPNLF 92
           SL++S    +++ QIH  ++   L    F ++KL+  +S+  DI +A  +F ++  P +F
Sbjct: 26  SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIF 85

Query: 93  MFNTMLRGYSNSNDSKQAFVIFNDLRNQDFLPDRFSFITTLKACARELAIHVGKGIHGIV 152
            +N ++RGYS +N  + A +++++++     PD F+F   LKAC+    + +G+ +H  V
Sbjct: 86  PWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145

Query: 153 HKSGHGLFNDVNNIILHFYGACEQIKDAHKLFDEIS-QRNDLVSWNTLMDGYLRASQPIV 212
            + G      V N ++  Y  C ++  A  +F+ +      +VSW  ++  Y +  +P+ 
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205

Query: 213 VLDTFRQMCRRGLIANTGTLLSVASAVGDVGNTMDGRSLYGHCIKLGLGSNLRVVTCLID 272
            L+ F QM +  +  +   L+SV +A   + +   GRS++   +K+GL     ++  L  
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265

Query: 273 MYGKFGDLDEAGTIFNEVAEKDVIVWNCLIDNYAKNGLIKKAVASLHLMKHEGMKPNSST 332
           MY K G +  A  +F+++   ++I+WN +I  YAKNG  ++A+   H M ++ ++P++ +
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325

Query: 333 LAGLISACAISGAVSPGKYLANYADNEGLDLDVVLGTTLISMYAKFGFLDKAIDIFDKMK 392
           +   ISACA  G++   + +  Y        DV + + LI M+AK G ++ A  +FD+  
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385

Query: 393 DKDVKTWTAMITGYGDHGQTRKVMETLYRMEEEGFRPNEITFLAVLNAYSHGGIVAEGMK 452
           D+DV  W+AMI GYG HG+ R+ +     ME  G  PN++TFL +L A +H G+V EG  
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445

Query: 453 CFKRMVYEYGITPKIEHYGCIIDLLGRAGLLEEAHKLIKSLPSTKGDITGWRTLLAACRV 512
            F RM  ++ I P+ +HY C+IDLLGRAG L++A+++IK +P   G +T W  LL+AC+ 
Sbjct: 446 FFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG-VTVWGALLSACKK 505

Query: 513 YGDVELGETVKRKLVDLNDEHPADSMLLSSTYAIAGRLSDYTQYQLRKEGNKVKEANGSS 572
           +  VELGE   ++L  ++  +    + LS+ YA A       + ++R +   + +  G S
Sbjct: 506 HRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCS 565

Query: 573 QVQI 574
            V++
Sbjct: 566 WVEV 567

[Close]

BLAST of CSPI05G07720 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.3e-84
Identity = 180/581 (30.98%), Postives = 303/581 (52.15%), Query Frame = 0


Query: 31  LLSLLESCNGTSKISQIHCYMVKTALDLDPFTLSKLLASAILD----IKYAASIFREIRN 90
           LLSLLE C     + QI   M+   L LDPF  S+L+A   L     + Y+  I + I N
Sbjct: 56  LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIEN 115

Query: 91  PNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQ---DFLPDRFSFITTLKACARELAIHVG 150
           PN+F +N  +RG+S S + K++F+++  +      +  PD F++    K CA      +G
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175

Query: 151 KGIHGIVHKSGHGLFNDVNNIILHFYGACEQIKDAHKLFDEISQRNDLVSWNTLMDGYLR 210
             I G V K    L + V+N  +H + +C  +++A K+FDE S   DLVSWN L++GY +
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDE-SPVRDLVSWNCLINGYKK 235

Query: 211 ASQPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDVGNTMDGRSLYGHCIKLGLGSNLRV 270
             +    +  ++ M   G+  +  T++ + S+   +G+   G+  Y +  + GL   + +
Sbjct: 236 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 295

Query: 271 VTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLIDNYAKNGLI--------------- 330
           V  L+DM+ K GD+ EA  IF+ + ++ ++ W  +I  YA+ GL+               
Sbjct: 296 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 355

Query: 331 ----------------KKAVASLHLMKHEGMKPNSSTLAGLISACAISGAVSPGKYLANY 390
                           + A+A    M+    KP+  T+   +SAC+  GA+  G ++  Y
Sbjct: 356 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 415

Query: 391 ADNEGLDLDVVLGTTLISMYAKFGFLDKAIDIFDKMKDKDVKTWTAMITGYGDHGQTRKV 450
            +   L L+V LGT+L+ MYAK G + +A+ +F  ++ ++  T+TA+I G   HG     
Sbjct: 416 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 475

Query: 451 METLYRMEEEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIID 510
           +     M + G  P+EITF+ +L+A  HGG++  G   F +M   + + P+++HY  ++D
Sbjct: 476 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 535

Query: 511 LLGRAGLLEEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPA 570
           LLGRAGLLEEA +L++S+P  + D   W  LL  CR++G+VELGE   +KL++L+     
Sbjct: 536 LLGRAGLLEEADRLMESMP-MEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSG 595

Query: 571 DSMLLSSTYAIAGRLSDYTQYQLRKEGNKVKEANGSSQVQI 574
             +LL   Y  A    D  + +       V++  G S +++
Sbjct: 596 IYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEV 634

[Close]

BLAST of CSPI05G07720 vs. ExPASy TrEMBL
Match: A0A0A0KL36 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168810 PE=4 SV=1)

HSP 1 Score: 1164.8 bits (3012), Expect = 0.0e+00
Identity = 583/591 (98.65%), Postives = 586/591 (99.15%), Query Frame = 0


Query: 1   MSLAPSLFSRQHLNTSSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDP 60
           MSLAPSLFSRQHLN+SSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDP
Sbjct: 1   MSLAPSLFSRQHLNSSSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDP 60

Query: 61  FTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQDF 120
           FTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQDF
Sbjct: 61  FTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQDF 120

Query: 121 LPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNIILHFYGACEQIKDAHK 180
           LPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNI+LHFYGACEQIKDAHK
Sbjct: 121 LPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNILLHFYGACEQIKDAHK 180

Query: 181 LFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDVG 240
           LFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDVG
Sbjct: 181 LFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDVG 240

Query: 241 NTMDGRSLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLID 300
           NTMDGRSLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLID
Sbjct: 241 NTMDGRSLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLID 300

Query: 301 NYAKNGLIKKAVASLHLMKHEGMKPNSSTLAGLISACAISGAVSPGKYLANYADNEGLDL 360
           NYAKNGLIKKAVASLHLMK EGMKPNSSTLAGLISACA SGAVS GKYLANYADNEGLDL
Sbjct: 301 NYAKNGLIKKAVASLHLMKLEGMKPNSSTLAGLISACATSGAVSTGKYLANYADNEGLDL 360

Query: 361 DVVLGTTLISMYAKFGFLDKAIDIFDKMKDKDVKTWTAMITGYGDHGQTRKVMETLYRME 420
           DVVLGTTLI MYAKFGFLDKAIDIFDKMK+KDVKTWTAMITGYGDHGQTRKVMETLYRME
Sbjct: 361 DVVLGTTLIGMYAKFGFLDKAIDIFDKMKNKDVKTWTAMITGYGDHGQTRKVMETLYRME 420

Query: 421 EEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLL 480
           EEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLL
Sbjct: 421 EEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLL 480

Query: 481 EEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPADSMLLSST 540
           EEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPADSMLLSST
Sbjct: 481 EEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPADSMLLSST 540

Query: 541 YAIAGRLSDYTQYQLRKEGNKVKEANGSSQVQIEKAKKEAGCSVIEMESLY 592
           YAIAGRLSDYTQYQLRKEGNKVKEANGSSQVQIEKA KEAGCSVIEMESLY
Sbjct: 541 YAIAGRLSDYTQYQLRKEGNKVKEANGSSQVQIEKAIKEAGCSVIEMESLY 591

[Close]

BLAST of CSPI05G07720 vs. ExPASy TrEMBL
Match: A0A1S3CTA0 (pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103504696 PE=4 SV=1)

HSP 1 Score: 1063.1 bits (2748), Expect = 4.1e-307
Identity = 534/590 (90.51%), Postives = 553/590 (93.73%), Query Frame = 0


Query: 1   MSLAPSLFSRQHLNTSSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDP 60
           MSLAP+LF RQHLNT SKNLYFAISSDQAKLLSLLESCNGT+KISQIHCYMVKTA DL P
Sbjct: 1   MSLAPTLFLRQHLNTCSKNLYFAISSDQAKLLSLLESCNGTTKISQIHCYMVKTAFDLVP 60

Query: 61  FTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQDF 120
           FTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSN+SKQAFVIFNDLRNQDF
Sbjct: 61  FTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNESKQAFVIFNDLRNQDF 120

Query: 121 LPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNIILHFYGACEQIKDAHK 180
           LPDRFSFITTLKAC RELAI VG+GIHGIV KSGHG FNDVNNI++HFY  C QIKDAHK
Sbjct: 121 LPDRFSFITTLKACVRELAIDVGQGIHGIVLKSGHGSFNDVNNILVHFYCNCGQIKDAHK 180

Query: 181 LFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDVG 240
           LFDEI QRNDLVSWNTLMDGY+RA QP VVLD FRQMCRRGLIANT TLLSV+SAVGDVG
Sbjct: 181 LFDEIPQRNDLVSWNTLMDGYVRAPQPTVVLDLFRQMCRRGLIANTLTLLSVSSAVGDVG 240

Query: 241 NTMDGRSLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLID 300
           NTMDGRSLYGHC+KLGLGSNL VVTCLIDMYGKFGD+DEAG IF+EVAEKDVI+WNCLID
Sbjct: 241 NTMDGRSLYGHCVKLGLGSNLHVVTCLIDMYGKFGDVDEAGKIFDEVAEKDVILWNCLID 300

Query: 301 NYAKNGLIKKAVASLHLMKHEGMKPNSSTLAGLISACAISGAVSPGKYLANYADNEGLDL 360
           NYAKNGLIKKAVASLHLMK EGMKPNSSTLAGLISACA SGAVS GKYLA YA+ EGLDL
Sbjct: 301 NYAKNGLIKKAVASLHLMKLEGMKPNSSTLAGLISACATSGAVSTGKYLAKYAEKEGLDL 360

Query: 361 DVVLGTTLISMYAKFGFLDKAIDIFDKMKDKDVKTWTAMITGYGDHGQTRKVMETLYRME 420
           DV LGTTLI MYAKFGFLDKAIDIFDKMKDKDVKTW AMITGYG HGQ  K MET YRME
Sbjct: 361 DVFLGTTLIGMYAKFGFLDKAIDIFDKMKDKDVKTWAAMITGYGAHGQASKAMETSYRME 420

Query: 421 EEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLL 480
           EEGFRPNEITFLAVLNAYSHGG+VAEG+KCFKRMVYEY ITPKIEHYGCIIDLLGRAGLL
Sbjct: 421 EEGFRPNEITFLAVLNAYSHGGMVAEGLKCFKRMVYEYEITPKIEHYGCIIDLLGRAGLL 480

Query: 481 EEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPADSMLLSST 540
           EEAH L+KSLPS KGDITGWRTLLA+CRVYGDVELGETVKR LVDLNDEHPADSMLLSST
Sbjct: 481 EEAHNLLKSLPS-KGDITGWRTLLASCRVYGDVELGETVKRMLVDLNDEHPADSMLLSST 540

Query: 541 YAIAGRLSDYTQYQLRKEGNKVKEANGSSQVQIEKAKKEAGCSVIEMESL 591
           YAIAGRLSDYTQYQ  KEGNKVKEANGSS++QIEKAKKEAGCSVIEMESL
Sbjct: 541 YAIAGRLSDYTQYQQSKEGNKVKEANGSSRMQIEKAKKEAGCSVIEMESL 589

[Close]

BLAST of CSPI05G07720 vs. ExPASy TrEMBL
Match: A0A5A7UGZ7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00280 PE=4 SV=1)

HSP 1 Score: 978.8 bits (2529), Expect = 1.0e-281
Identity = 490/540 (90.74%), Postives = 506/540 (93.70%), Query Frame = 0


Query: 51  MVKTALDLDPFTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFV 110
           MVKTA DL PFTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSN+SKQAFV
Sbjct: 1   MVKTAFDLVPFTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNESKQAFV 60

Query: 111 IFNDLRNQDFLPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNIILHFYG 170
           IFNDLRNQDFLPDRFSFITTLKAC RELAI VG+GIHGIV KSGHG FNDVNNI+LHFY 
Sbjct: 61  IFNDLRNQDFLPDRFSFITTLKACVRELAIDVGQGIHGIVLKSGHGSFNDVNNILLHFYC 120

Query: 171 ACEQIKDAHKLFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLL 230
            C QIKDAHKLFDEI QRNDLVSWNTLMDGY+RA QP VVLD FRQMCRRGLIANT TLL
Sbjct: 121 NCGQIKDAHKLFDEIPQRNDLVSWNTLMDGYVRAPQPTVVLDLFRQMCRRGLIANTLTLL 180

Query: 231 SVASAVGDVGNTMDGRSLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEK 290
           SV+SAVGDVGNTMDGRSLYGHC+KLGLGSNL VVTCLIDMYGKFGD+DEAG IF+EVAEK
Sbjct: 181 SVSSAVGDVGNTMDGRSLYGHCVKLGLGSNLHVVTCLIDMYGKFGDVDEAGKIFDEVAEK 240

Query: 291 DVIVWNCLIDNYAKNGLIKKAVASLHLMKHEGMKPNSSTLAGLISACAISGAVSPGKYLA 350
           DVI+WNCLIDNYAKNGLIKKAVASLHLMK EGMKPNSSTLAGLISACA SGAVS GKYLA
Sbjct: 241 DVILWNCLIDNYAKNGLIKKAVASLHLMKLEGMKPNSSTLAGLISACATSGAVSTGKYLA 300

Query: 351 NYADNEGLDLDVVLGTTLISMYAKFGFLDKAIDIFDKMKDKDVKTWTAMITGYGDHGQTR 410
            YA+ EGLDLDV LGTTLI MYAKFGFLDKAIDIFDKMKDKDVKTW AMITGYG HGQ  
Sbjct: 301 KYAEKEGLDLDVFLGTTLIGMYAKFGFLDKAIDIFDKMKDKDVKTWAAMITGYGAHGQAS 360

Query: 411 KVMETLYRMEEEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCI 470
           K MET YRMEEEGFRPNEITFLAVLNAYSHGG+VAEG+KCFKRMVYEYGITPKIEHYGCI
Sbjct: 361 KAMETSYRMEEEGFRPNEITFLAVLNAYSHGGMVAEGLKCFKRMVYEYGITPKIEHYGCI 420

Query: 471 IDLLGRAGLLEEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEH 530
           IDLLGRAGLLEEAH L+KSLPS KGDITGWRTLLA+CRVYGDVELGETVKR LVDLNDEH
Sbjct: 421 IDLLGRAGLLEEAHNLLKSLPS-KGDITGWRTLLASCRVYGDVELGETVKRMLVDLNDEH 480

Query: 531 PADSMLLSSTYAIAGRLSDYTQYQLRKEGNKVKEANGSSQVQIEKAKKEAGCSVIEMESL 590
           PADSMLLSSTYAIAGRLSDYTQYQ  KEGNKVKEANGSS++QIEKAKKEAGCSVIEMESL
Sbjct: 481 PADSMLLSSTYAIAGRLSDYTQYQQSKEGNKVKEANGSSRMQIEKAKKEAGCSVIEMESL 539

[Close]

BLAST of CSPI05G07720 vs. ExPASy TrEMBL
Match: A0A6J1DA73 (pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111019088 PE=4 SV=1)

HSP 1 Score: 919.1 bits (2374), Expect = 9.6e-264
Identity = 458/590 (77.63%), Postives = 517/590 (87.63%), Query Frame = 0


Query: 1   MSLAPSLFSRQHLNTSSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDP 60
           MSLA +L  R++LNT SKN+  A+ SD  KLL LL+SCNGTS+ISQIHCYMVKTALDL P
Sbjct: 1   MSLAHALCLRRNLNTWSKNISHAVFSDDQKLLLLLKSCNGTSEISQIHCYMVKTALDLVP 60

Query: 61  FTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQDF 120
           FT SKLLASAILDIKYAASIFR+IRNPNLFMFNT+LRGYSNS+DS+QAFVIFNDLRNQ+F
Sbjct: 61  FTSSKLLASAILDIKYAASIFRDIRNPNLFMFNTLLRGYSNSDDSRQAFVIFNDLRNQNF 120

Query: 121 LPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNIILHFYGACEQIKDAHK 180
           LPD FSFIT LKACARELAI+ G+GIHGIVH++GHGLFN VNN++LHFY +C QI DA K
Sbjct: 121 LPDEFSFITILKACARELAINTGQGIHGIVHRTGHGLFNHVNNVLLHFYCSCGQIADARK 180

Query: 181 LFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDVG 240
           LFD++SQRNDLVSWNTLM GYL ASQP VVLD FRQMC RGLI +  T+L+V+SAVGD G
Sbjct: 181 LFDDVSQRNDLVSWNTLMSGYLHASQPTVVLDFFRQMCGRGLI-SVNTVLTVSSAVGDAG 240

Query: 241 NTMDGRSLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLID 300
           N++DGRSL+GHCIK+GL S L VVTCLIDMY KFGDL    TIF+EVAEKDVI+WNCLID
Sbjct: 241 NSLDGRSLHGHCIKVGLCSGLSVVTCLIDMYAKFGDLVSGQTIFDEVAEKDVILWNCLID 300

Query: 301 NYAKNGLIKKAVASLHLMKHEGMKPNSSTLAGLISACAISGAVSPGKYLANYADNEGLDL 360
           NYA+NG+++KAV SLHLMK EG++PNSSTLAGL+SACA  G VS GKYL NY + EGL +
Sbjct: 301 NYARNGMLEKAVFSLHLMKLEGIRPNSSTLAGLLSACATFGVVSTGKYLGNYVEEEGLAV 360

Query: 361 DVVLGTTLISMYAKFGFLDKAIDIFDKMKDKDVKTWTAMITGYGDHGQTRKVMETLYRME 420
           D VLGT L+ MYAK GFLDKAIDIFDK++DKDVK+WTAMITGYG HGQTRK + TLY ME
Sbjct: 361 DAVLGTALVDMYAKCGFLDKAIDIFDKIEDKDVKSWTAMITGYGAHGQTRKAIRTLYEME 420

Query: 421 EEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLL 480
           +EGF+PNEITFLAVLNA SHGG+V EGM+CFKRMVYEYG+TPKIEHYGCIIDLLGRAGLL
Sbjct: 421 DEGFQPNEITFLAVLNACSHGGVVVEGMRCFKRMVYEYGMTPKIEHYGCIIDLLGRAGLL 480

Query: 481 EEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPADSMLLSST 540
           EEAH LIK+LPS KGDITGWR LLAACRVYGDVELGE+VKR LVDLNDEHP DS+LLSST
Sbjct: 481 EEAHNLIKNLPS-KGDITGWRALLAACRVYGDVELGESVKRMLVDLNDEHPTDSVLLSST 540

Query: 541 YAIAGRLSDYTQYQLRKEGNKVKEANGSSQVQIEKAKKEAGCSVIEMESL 591
           YAIAGRLSDYT+ Q  KE N++KE   SS +Q E AKKEAG S+IEME+L
Sbjct: 541 YAIAGRLSDYTRTQQIKEENRMKEETRSSHMQNETAKKEAGRSIIEMENL 588

[Close]

BLAST of CSPI05G07720 vs. ExPASy TrEMBL
Match: A0A6J1HTY2 (pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111467439 PE=4 SV=1)

HSP 1 Score: 917.9 bits (2371), Expect = 2.1e-263
Identity = 460/591 (77.83%), Postives = 514/591 (86.97%), Query Frame = 0


Query: 1   MSLAPSLFSRQHLNTSSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDP 60
           MSL+ +L  R++LN  SKNL   +SSD  KLL LL+SCNGTS ISQIHCYMVKTALDL P
Sbjct: 1   MSLSHALCLRRNLNIWSKNLGHGVSSDDQKLLFLLKSCNGTSDISQIHCYMVKTALDLVP 60

Query: 61  FTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQDF 120
           FTLSKLLAS ILDI YAASIF+ IRNPNLFMFNTMLRGYSNS+DSKQAFVIFNDLRNQDF
Sbjct: 61  FTLSKLLASTILDINYAASIFKVIRNPNLFMFNTMLRGYSNSDDSKQAFVIFNDLRNQDF 120

Query: 121 LPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNIILHFYGACEQIKDAHK 180
           LPD FSFIT LKACARELAI+ G+GIHGIVH+SGHGLF+ +NN++LHFY AC QI DA K
Sbjct: 121 LPDEFSFITILKACARELAINSGQGIHGIVHRSGHGLFSHLNNMLLHFYCACGQIGDARK 180

Query: 181 LFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDVG 240
           LFDEI QRNDLVSWNTLM GYL ASQP VVLD FRQMCRRGLIA   T+L+V+SAVGDVG
Sbjct: 181 LFDEIPQRNDLVSWNTLMGGYLHASQPTVVLDFFRQMCRRGLIAGAYTVLTVSSAVGDVG 240

Query: 241 NTMDGRSLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLID 300
            ++DGRSL+G CIKLGL S+L VVTCLI+MY KF DL+    IF+EVAEKDV++WNCLID
Sbjct: 241 YSLDGRSLHGQCIKLGLCSDLNVVTCLINMYAKFKDLESGQLIFDEVAEKDVVLWNCLID 300

Query: 301 NYAKNGLIKKAVASLHLMKHEGMKPNSSTLAGLISACAISGAVSPGKYLANYADNEGLDL 360
           NYA+NG+++ A+ SLHLMKHEG +PNSSTLAGL+SAC+  GAV  GKYL +Y + EGL L
Sbjct: 301 NYARNGMLEIAIDSLHLMKHEGKQPNSSTLAGLLSACSTFGAVGTGKYLGHYVEEEGLVL 360

Query: 361 DVVLGTTLISMYAKFGFLDKAIDIFDKMKDKDVKTWTAMITGYGDHGQTRKVMETLYRME 420
           D  LGT LI MYAK GFLDKAIDIFDK+KDKDVKTWTAMITGYG HGQTRK ++TL+RME
Sbjct: 361 DTALGTALIDMYAKCGFLDKAIDIFDKIKDKDVKTWTAMITGYGAHGQTRKAIDTLFRME 420

Query: 421 EEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLL 480
           EEGFRPNEITFLAVLNA SHGGIV EGM+CFKRMVYEY +TPKIEHYGCIIDLLGRAGLL
Sbjct: 421 EEGFRPNEITFLAVLNACSHGGIVIEGMRCFKRMVYEYRMTPKIEHYGCIIDLLGRAGLL 480

Query: 481 EEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPADSMLLSST 540
           EEAHKLIKSLPS +GDITGWR LLAACRVYGDVELGE+  R LVDLNDEHP DSMLLSST
Sbjct: 481 EEAHKLIKSLPS-EGDITGWRALLAACRVYGDVELGESAMRMLVDLNDEHPTDSMLLSST 540

Query: 541 YAIAGRLSDYTQYQLRKEGNKVKEANGSSQVQIEKAKKEAGCSVIEMESLY 592
           YA+AGRLSDYTQYQ  +E N++KE   SSQ+Q EKA+KEAG S+IEM++LY
Sbjct: 541 YAVAGRLSDYTQYQQIEEENRMKEGIRSSQMQTEKARKEAGRSMIEMDNLY 590

[Close]

BLAST of CSPI05G07720 vs. NCBI nr
Match: XP_004143729.1 (pentatricopeptide repeat-containing protein At1g26900, mitochondrial [Cucumis sativus] >KGN50343.1 hypothetical protein Csa_000385 [Cucumis sativus])

HSP 1 Score: 1164.8 bits (3012), Expect = 0.0e+00
Identity = 583/591 (98.65%), Postives = 586/591 (99.15%), Query Frame = 0


Query: 1   MSLAPSLFSRQHLNTSSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDP 60
           MSLAPSLFSRQHLN+SSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDP
Sbjct: 1   MSLAPSLFSRQHLNSSSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDP 60

Query: 61  FTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQDF 120
           FTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQDF
Sbjct: 61  FTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQDF 120

Query: 121 LPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNIILHFYGACEQIKDAHK 180
           LPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNI+LHFYGACEQIKDAHK
Sbjct: 121 LPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNILLHFYGACEQIKDAHK 180

Query: 181 LFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDVG 240
           LFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDVG
Sbjct: 181 LFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDVG 240

Query: 241 NTMDGRSLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLID 300
           NTMDGRSLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLID
Sbjct: 241 NTMDGRSLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLID 300

Query: 301 NYAKNGLIKKAVASLHLMKHEGMKPNSSTLAGLISACAISGAVSPGKYLANYADNEGLDL 360
           NYAKNGLIKKAVASLHLMK EGMKPNSSTLAGLISACA SGAVS GKYLANYADNEGLDL
Sbjct: 301 NYAKNGLIKKAVASLHLMKLEGMKPNSSTLAGLISACATSGAVSTGKYLANYADNEGLDL 360

Query: 361 DVVLGTTLISMYAKFGFLDKAIDIFDKMKDKDVKTWTAMITGYGDHGQTRKVMETLYRME 420
           DVVLGTTLI MYAKFGFLDKAIDIFDKMK+KDVKTWTAMITGYGDHGQTRKVMETLYRME
Sbjct: 361 DVVLGTTLIGMYAKFGFLDKAIDIFDKMKNKDVKTWTAMITGYGDHGQTRKVMETLYRME 420

Query: 421 EEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLL 480
           EEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLL
Sbjct: 421 EEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLL 480

Query: 481 EEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPADSMLLSST 540
           EEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPADSMLLSST
Sbjct: 481 EEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPADSMLLSST 540

Query: 541 YAIAGRLSDYTQYQLRKEGNKVKEANGSSQVQIEKAKKEAGCSVIEMESLY 592
           YAIAGRLSDYTQYQLRKEGNKVKEANGSSQVQIEKA KEAGCSVIEMESLY
Sbjct: 541 YAIAGRLSDYTQYQLRKEGNKVKEANGSSQVQIEKAIKEAGCSVIEMESLY 591

[Close]

BLAST of CSPI05G07720 vs. NCBI nr
Match: XP_008467317.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g26900, mitochondrial [Cucumis melo])

HSP 1 Score: 1063.1 bits (2748), Expect = 8.5e-307
Identity = 534/590 (90.51%), Postives = 553/590 (93.73%), Query Frame = 0


Query: 1   MSLAPSLFSRQHLNTSSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDP 60
           MSLAP+LF RQHLNT SKNLYFAISSDQAKLLSLLESCNGT+KISQIHCYMVKTA DL P
Sbjct: 1   MSLAPTLFLRQHLNTCSKNLYFAISSDQAKLLSLLESCNGTTKISQIHCYMVKTAFDLVP 60

Query: 61  FTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQDF 120
           FTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSN+SKQAFVIFNDLRNQDF
Sbjct: 61  FTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNESKQAFVIFNDLRNQDF 120

Query: 121 LPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNIILHFYGACEQIKDAHK 180
           LPDRFSFITTLKAC RELAI VG+GIHGIV KSGHG FNDVNNI++HFY  C QIKDAHK
Sbjct: 121 LPDRFSFITTLKACVRELAIDVGQGIHGIVLKSGHGSFNDVNNILVHFYCNCGQIKDAHK 180

Query: 181 LFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDVG 240
           LFDEI QRNDLVSWNTLMDGY+RA QP VVLD FRQMCRRGLIANT TLLSV+SAVGDVG
Sbjct: 181 LFDEIPQRNDLVSWNTLMDGYVRAPQPTVVLDLFRQMCRRGLIANTLTLLSVSSAVGDVG 240

Query: 241 NTMDGRSLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLID 300
           NTMDGRSLYGHC+KLGLGSNL VVTCLIDMYGKFGD+DEAG IF+EVAEKDVI+WNCLID
Sbjct: 241 NTMDGRSLYGHCVKLGLGSNLHVVTCLIDMYGKFGDVDEAGKIFDEVAEKDVILWNCLID 300

Query: 301 NYAKNGLIKKAVASLHLMKHEGMKPNSSTLAGLISACAISGAVSPGKYLANYADNEGLDL 360
           NYAKNGLIKKAVASLHLMK EGMKPNSSTLAGLISACA SGAVS GKYLA YA+ EGLDL
Sbjct: 301 NYAKNGLIKKAVASLHLMKLEGMKPNSSTLAGLISACATSGAVSTGKYLAKYAEKEGLDL 360

Query: 361 DVVLGTTLISMYAKFGFLDKAIDIFDKMKDKDVKTWTAMITGYGDHGQTRKVMETLYRME 420
           DV LGTTLI MYAKFGFLDKAIDIFDKMKDKDVKTW AMITGYG HGQ  K MET YRME
Sbjct: 361 DVFLGTTLIGMYAKFGFLDKAIDIFDKMKDKDVKTWAAMITGYGAHGQASKAMETSYRME 420

Query: 421 EEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLL 480
           EEGFRPNEITFLAVLNAYSHGG+VAEG+KCFKRMVYEY ITPKIEHYGCIIDLLGRAGLL
Sbjct: 421 EEGFRPNEITFLAVLNAYSHGGMVAEGLKCFKRMVYEYEITPKIEHYGCIIDLLGRAGLL 480

Query: 481 EEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPADSMLLSST 540
           EEAH L+KSLPS KGDITGWRTLLA+CRVYGDVELGETVKR LVDLNDEHPADSMLLSST
Sbjct: 481 EEAHNLLKSLPS-KGDITGWRTLLASCRVYGDVELGETVKRMLVDLNDEHPADSMLLSST 540

Query: 541 YAIAGRLSDYTQYQLRKEGNKVKEANGSSQVQIEKAKKEAGCSVIEMESL 591
           YAIAGRLSDYTQYQ  KEGNKVKEANGSS++QIEKAKKEAGCSVIEMESL
Sbjct: 541 YAIAGRLSDYTQYQQSKEGNKVKEANGSSRMQIEKAKKEAGCSVIEMESL 589

[Close]

BLAST of CSPI05G07720 vs. NCBI nr
Match: KAA0055102.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 978.8 bits (2529), Expect = 2.1e-281
Identity = 490/540 (90.74%), Postives = 506/540 (93.70%), Query Frame = 0


Query: 51  MVKTALDLDPFTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFV 110
           MVKTA DL PFTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSN+SKQAFV
Sbjct: 1   MVKTAFDLVPFTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNESKQAFV 60

Query: 111 IFNDLRNQDFLPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNIILHFYG 170
           IFNDLRNQDFLPDRFSFITTLKAC RELAI VG+GIHGIV KSGHG FNDVNNI+LHFY 
Sbjct: 61  IFNDLRNQDFLPDRFSFITTLKACVRELAIDVGQGIHGIVLKSGHGSFNDVNNILLHFYC 120

Query: 171 ACEQIKDAHKLFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLL 230
            C QIKDAHKLFDEI QRNDLVSWNTLMDGY+RA QP VVLD FRQMCRRGLIANT TLL
Sbjct: 121 NCGQIKDAHKLFDEIPQRNDLVSWNTLMDGYVRAPQPTVVLDLFRQMCRRGLIANTLTLL 180

Query: 231 SVASAVGDVGNTMDGRSLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEK 290
           SV+SAVGDVGNTMDGRSLYGHC+KLGLGSNL VVTCLIDMYGKFGD+DEAG IF+EVAEK
Sbjct: 181 SVSSAVGDVGNTMDGRSLYGHCVKLGLGSNLHVVTCLIDMYGKFGDVDEAGKIFDEVAEK 240

Query: 291 DVIVWNCLIDNYAKNGLIKKAVASLHLMKHEGMKPNSSTLAGLISACAISGAVSPGKYLA 350
           DVI+WNCLIDNYAKNGLIKKAVASLHLMK EGMKPNSSTLAGLISACA SGAVS GKYLA
Sbjct: 241 DVILWNCLIDNYAKNGLIKKAVASLHLMKLEGMKPNSSTLAGLISACATSGAVSTGKYLA 300

Query: 351 NYADNEGLDLDVVLGTTLISMYAKFGFLDKAIDIFDKMKDKDVKTWTAMITGYGDHGQTR 410
            YA+ EGLDLDV LGTTLI MYAKFGFLDKAIDIFDKMKDKDVKTW AMITGYG HGQ  
Sbjct: 301 KYAEKEGLDLDVFLGTTLIGMYAKFGFLDKAIDIFDKMKDKDVKTWAAMITGYGAHGQAS 360

Query: 411 KVMETLYRMEEEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCI 470
           K MET YRMEEEGFRPNEITFLAVLNAYSHGG+VAEG+KCFKRMVYEYGITPKIEHYGCI
Sbjct: 361 KAMETSYRMEEEGFRPNEITFLAVLNAYSHGGMVAEGLKCFKRMVYEYGITPKIEHYGCI 420

Query: 471 IDLLGRAGLLEEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEH 530
           IDLLGRAGLLEEAH L+KSLPS KGDITGWRTLLA+CRVYGDVELGETVKR LVDLNDEH
Sbjct: 421 IDLLGRAGLLEEAHNLLKSLPS-KGDITGWRTLLASCRVYGDVELGETVKRMLVDLNDEH 480

Query: 531 PADSMLLSSTYAIAGRLSDYTQYQLRKEGNKVKEANGSSQVQIEKAKKEAGCSVIEMESL 590
           PADSMLLSSTYAIAGRLSDYTQYQ  KEGNKVKEANGSS++QIEKAKKEAGCSVIEMESL
Sbjct: 481 PADSMLLSSTYAIAGRLSDYTQYQQSKEGNKVKEANGSSRMQIEKAKKEAGCSVIEMESL 539

[Close]

BLAST of CSPI05G07720 vs. NCBI nr
Match: XP_038906998.1 (pentatricopeptide repeat-containing protein At1g26900, mitochondrial [Benincasa hispida])

HSP 1 Score: 966.8 bits (2498), Expect = 8.3e-278
Identity = 490/591 (82.91%), Postives = 530/591 (89.68%), Query Frame = 0


Query: 1   MSLAPSLFSRQHLNTSSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDP 60
           MSLAP+LF RQ+LN  SKNL  AISS  AKLL LL+SCNGT++ISQIHCYMVKTALDL P
Sbjct: 1   MSLAPALFLRQNLNIWSKNLSHAISSGDAKLLFLLKSCNGTAEISQIHCYMVKTALDLVP 60

Query: 61  FTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQDF 120
           FTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRG+SNSNDSKQAFVIFNDLRN+DF
Sbjct: 61  FTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGHSNSNDSKQAFVIFNDLRNRDF 120

Query: 121 LPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNIILHFYGACEQIKDAHK 180
           LPD FSFIT LKACARELAI VG+GIHGIVH+SGH LFN V NI+LHFY AC QI DAHK
Sbjct: 121 LPDEFSFITILKACARELAIDVGQGIHGIVHRSGHSLFNHVKNILLHFYCACGQIGDAHK 180

Query: 181 LFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDVG 240
           LFDEI QRNDLVSWNTLM GYL ASQPIVVLD FRQMCRRGLIA+  T+L+V+SAV DVG
Sbjct: 181 LFDEIPQRNDLVSWNTLMGGYLHASQPIVVLDFFRQMCRRGLIASVNTVLTVSSAVCDVG 240

Query: 241 NTMDGRSLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLID 300
           NTMDG+SL+G CIKLGL S+L VVTCLIDMY KFGDLDE  T+FNEVAEKDVI+WNCLID
Sbjct: 241 NTMDGKSLHGQCIKLGLCSDLNVVTCLIDMYAKFGDLDEGETLFNEVAEKDVILWNCLID 300

Query: 301 NYAKNGLIKKAVASLHLMKHEGMKPNSSTLAGLISACAISGAVSPGKYLANYADNEGLDL 360
           NYA+NGLI+KAVASLHLMK EG +PNSSTLA LISACA   AVS GKYL NY + EGL L
Sbjct: 301 NYARNGLIEKAVASLHLMKLEGTRPNSSTLACLISACATFNAVSTGKYLGNYVE-EGLVL 360

Query: 361 DVVLGTTLISMYAKFGFLDKAIDIFDKMKDKDVKTWTAMITGYGDHGQTRKVMETLYRME 420
           DVVLGTTLI MYAK GFLDKAID+F+K+++KDVKTWTAMITGYG HGQTRK +ETLYRME
Sbjct: 361 DVVLGTTLIDMYAKCGFLDKAIDVFNKIQNKDVKTWTAMITGYGAHGQTRKAIETLYRME 420

Query: 421 EEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLL 480
           +EGFRPNEITFLAVLNA SHGG VAEG++CFKRMVYEYG+TPKIEHYGCIIDLLGRAGLL
Sbjct: 421 KEGFRPNEITFLAVLNACSHGGKVAEGIRCFKRMVYEYGMTPKIEHYGCIIDLLGRAGLL 480

Query: 481 EEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPADSMLLSST 540
           EEAH LIKSLPS +GDITGWR LLAACRVYGDVELGE+VKR LVDLNDEHP DSMLLSST
Sbjct: 481 EEAHNLIKSLPS-EGDITGWRALLAACRVYGDVELGESVKRMLVDLNDEHPTDSMLLSST 540

Query: 541 YAIAGRLSDYTQYQLRKEGNKVKEANGSSQVQIEKAKKEAGCSVIEMESLY 592
           YAIAGRLSDYTQYQ  KEGN+ KE  GSSQ+QIE+AKKE GCS+IEM+  Y
Sbjct: 541 YAIAGRLSDYTQYQQIKEGNRRKEVTGSSQMQIERAKKEVGCSMIEMDYFY 589

[Close]

BLAST of CSPI05G07720 vs. NCBI nr
Match: XP_023542006.1 (pentatricopeptide repeat-containing protein At1g26900, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 932.9 bits (2410), Expect = 1.3e-267
Identity = 464/591 (78.51%), Postives = 521/591 (88.16%), Query Frame = 0


Query: 1   MSLAPSLFSRQHLNTSSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDP 60
           MSL+P+L  R++LN  SKNL   +SSD  KLL LL+SCNGTS+ISQIHCYMVKTALDL P
Sbjct: 1   MSLSPALCLRRNLNIWSKNLSHGVSSDDQKLLFLLKSCNGTSEISQIHCYMVKTALDLVP 60

Query: 61  FTLSKLLASAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQDF 120
           FTLSKLLASAILDIKYAASIF+ IRNPNLFMFNTMLRGYSNS+DSKQAFVIFNDLRNQDF
Sbjct: 61  FTLSKLLASAILDIKYAASIFKVIRNPNLFMFNTMLRGYSNSDDSKQAFVIFNDLRNQDF 120

Query: 121 LPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNIILHFYGACEQIKDAHK 180
           LPD FSFIT LKACARELAI  G+G+HGIVH+SGHGLF+ +NN++LHFY AC QI DA K
Sbjct: 121 LPDEFSFITILKACARELAIDAGQGVHGIVHRSGHGLFSQLNNMLLHFYCACGQIGDARK 180

Query: 181 LFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDVG 240
           LFDEI QRNDLVSWNTLM GYL ASQP VVLD FRQMCRRGLIA   T+L+V+SAVGDVG
Sbjct: 181 LFDEIPQRNDLVSWNTLMGGYLHASQPTVVLDFFRQMCRRGLIAGANTVLTVSSAVGDVG 240

Query: 241 NTMDGRSLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLID 300
           +++DGRSL+G CIKLGL S+L VVTCLI+MY KF DL+    IF+EVAEKDV+VWNCLID
Sbjct: 241 HSLDGRSLHGQCIKLGLCSDLNVVTCLINMYAKFKDLESGQLIFDEVAEKDVVVWNCLID 300

Query: 301 NYAKNGLIKKAVASLHLMKHEGMKPNSSTLAGLISACAISGAVSPGKYLANYADNEGLDL 360
           NYA+NG+++ A+ SLHLMKHEG +PNSSTLAGL+SAC+  GAV  GKYL +Y + EGL L
Sbjct: 301 NYARNGMLEIAIDSLHLMKHEGKQPNSSTLAGLLSACSTFGAVGTGKYLGHYVEEEGLVL 360

Query: 361 DVVLGTTLISMYAKFGFLDKAIDIFDKMKDKDVKTWTAMITGYGDHGQTRKVMETLYRME 420
           D VLGT LI MYAK GFLDKAIDIFDK+KDKDVKTWTAMITGYG HGQT+K ++TL+RME
Sbjct: 361 DAVLGTALIDMYAKCGFLDKAIDIFDKIKDKDVKTWTAMITGYGAHGQTKKAIDTLFRME 420

Query: 421 EEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLL 480
           EEGFRPNEITFLAVLNA SHGGIV EGM+CFKRMVYEY +TPKIEHYGCIIDLLGRAGLL
Sbjct: 421 EEGFRPNEITFLAVLNACSHGGIVIEGMRCFKRMVYEYRMTPKIEHYGCIIDLLGRAGLL 480

Query: 481 EEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPADSMLLSST 540
           EEAHKLIKSLPS +GDITGWR LLAACRVYGDVELGE+VKR LVDLNDEHP DSMLLSST
Sbjct: 481 EEAHKLIKSLPS-EGDITGWRALLAACRVYGDVELGESVKRMLVDLNDEHPTDSMLLSST 540

Query: 541 YAIAGRLSDYTQYQLRKEGNKVKEANGSSQVQIEKAKKEAGCSVIEMESLY 592
           YA+AGRLSDYTQYQ  +E N++KE   SSQ++ EKA+KEAG S+IEM++LY
Sbjct: 541 YAVAGRLSDYTQYQQIEEENRMKEGISSSQMRTEKARKEAGRSMIEMDNLY 590

[Close]

BLAST of CSPI05G07720 vs. TAIR 10
Match: AT1G26900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 584.7 bits (1506), Expect = 8.2e-167
Identity = 295/577 (51.13%), Postives = 405/577 (70.19%), Query Frame = 0


Query: 1   MSLAPSLFSRQHLNTSSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDP 60
           M+LA +   R++     +NL   +S    KL++ L SC  T ++S+IH YMVKT LD D 
Sbjct: 1   MTLAITSRLRRNFVFRRRNLESLLSPQCQKLINDLRSCRDTVEVSRIHGYMVKTGLDKDD 60

Query: 61  FTLSKLLA-SAILDIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQD 120
           F +SKLLA S++LDI+YA+SIF  + N NLFMFNTM+RGYS S++ ++AF +FN LR + 
Sbjct: 61  FAVSKLLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKG 120

Query: 121 FLPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNIILHFYGACEQIKDAH 180
              DRFSFITTLK+C+REL + +G+G+HGI  +SG  +F D+ N ++HFY  C +I DA 
Sbjct: 121 LTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDAR 180

Query: 181 KLFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDV 240
           K+FDE+ Q  D V+++TLM+GYL+ S+  + LD FR M +  ++ N  TLLS  SA+ D+
Sbjct: 181 KVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDL 240

Query: 241 GNTMDGRSLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLI 300
           G+     S +  CIK+GL  +L ++T LI MYGK G +  A  IF+    KDV+ WNC+I
Sbjct: 241 GDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMI 300

Query: 301 DNYAKNGLIKKAVASLHLMKHEGMKPNSSTLAGLISACAISGAVSPGKYLANYADNEGLD 360
           D YAK GL+++ V  L  MK+E MKPNSST  GL+S+CA S A   G+ +A+  + E + 
Sbjct: 301 DQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIA 360

Query: 361 LDVVLGTTLISMYAKFGFLDKAIDIFDKMKDKDVKTWTAMITGYGDHGQTRKVMETLYRM 420
           LD +LGT L+ MYAK G L+KA++IF++MKDKDVK+WTAMI+GYG HG  R+ +    +M
Sbjct: 361 LDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKM 420

Query: 421 EEEG--FRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRA 480
           EEE    RPNEITFL VLNA SHGG+V EG++CFKRMV  Y  TPK+EHYGC++DLLGRA
Sbjct: 421 EEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRA 480

Query: 481 GLLEEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPADSMLL 540
           G LEEA++LI++LP T  D T WR LLAACRVYG+ +LGE+V  +L ++ + HPAD++LL
Sbjct: 481 GQLEEAYELIRNLPIT-SDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILL 540

Query: 541 SSTYAIAGRLSDYTQYQLRKEGNKVKEANGSSQVQIE 575
           + T+A+AG      +  L  E NK ++  G S ++IE
Sbjct: 541 AGTHAVAGN----PEKSLDNELNKGRKEAGYSAIEIE 572

[Close]

BLAST of CSPI05G07720 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 340.5 bits (872), Expect = 2.7e-93
Identity = 202/616 (32.79%), Postives = 327/616 (53.08%), Query Frame = 0


Query: 1   MSLAPSLFSRQHLNTSSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDP 60
           +++  S +    L +SS   Y +I +  +  LSLL +C     +  IH  M+K  L    
Sbjct: 8   LTVPSSSYPFHFLPSSSDPPYDSIRNHPS--LSLLHNCKTLQSLRIIHAQMIKIGLHNTN 67

Query: 61  FTLSKLLASAILD-----IKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDL 120
           + LSKL+   IL      + YA S+F+ I+ PNL ++NTM RG++ S+D   A  ++  +
Sbjct: 68  YALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCM 127

Query: 121 RNQDFLPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNIILHFYGACEQI 180
            +   LP+ ++F   LK+CA+  A   G+ IHG V K G  L   V+  ++  Y    ++
Sbjct: 128 ISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRL 187

Query: 181 KDAHKLFDEISQRN------------------------------DLVSWNTLMDGYLRAS 240
           +DAHK+FD+   R+                              D+VSWN ++ GY    
Sbjct: 188 EDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETG 247

Query: 241 QPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDVGNTMDGRSLYGHCIKLGLGSNLRVVT 300
                L+ F+ M +  +  +  T+++V SA    G+   GR ++      G GSNL++V 
Sbjct: 248 NYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVN 307

Query: 301 CLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLIDNYAKNGLIKKAVASLHLMKHEGMKP 360
            LID+Y K G+L+ A  +F  +  KDVI WN LI  Y    L K+A+     M   G  P
Sbjct: 308 ALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 367

Query: 361 NSSTLAGLISACAISGAVSPGKYLANYADN--EGLDLDVVLGTTLISMYAKFGFLDKAID 420
           N  T+  ++ ACA  GA+  G+++  Y D   +G+     L T+LI MYAK G ++ A  
Sbjct: 368 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ 427

Query: 421 IFDKMKDKDVKTWTAMITGYGDHGQTRKVMETLYRMEEEGFRPNEITFLAVLNAYSHGGI 480
           +F+ +  K + +W AMI G+  HG+     +   RM + G +P++ITF+ +L+A SH G+
Sbjct: 428 VFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGM 487

Query: 481 VAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLLEEAHKLIKSLPSTKGDITGWRTL 540
           +  G   F+ M  +Y +TPK+EHYGC+IDLLG +GL +EA ++I ++   + D   W +L
Sbjct: 488 LDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI-NMMEMEPDGVIWCSL 547

Query: 541 LAACRVYGDVELGETVKRKLVDLNDEHPADSMLLSSTYAIAGRLSDYTQYQLRKEGNKVK 580
           L AC+++G+VELGE+    L+ +  E+P   +LLS+ YA AGR ++  + +       +K
Sbjct: 548 LKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMK 607

[Close]

BLAST of CSPI05G07720 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 323.2 bits (827), Expect = 4.5e-88
Identity = 191/626 (30.51%), Postives = 334/626 (53.35%), Query Frame = 0


Query: 2   SLAPSLFSRQHLNTSSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDPF 61
           S A  L   +H N S+ N     ++++++ +SL+E C    ++ Q H +M++T    DP+
Sbjct: 5   STAQPLSLPRHPNFSNPN-QPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPY 64

Query: 62  TLSKLLASAIL----DIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRN 121
           + SKL A A L     ++YA  +F EI  PN F +NT++R Y++  D   +   F D+ +
Sbjct: 65  SASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVS 124

Query: 122 Q-DFLPDRFSFITTLKACARELAIHVGKGIHGIVHKSGHGLFNDVNNIILHFYGACEQIK 181
           +    P++++F   +KA A   ++ +G+ +HG+  KS  G    V N ++H Y +C  + 
Sbjct: 125 ESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLD 184

Query: 182 DAHKLFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLLSVASAV 241
            A K+F  I ++ D+VSWN++++G+++   P   L+ F++M    + A+  T++ V SA 
Sbjct: 185 SACKVFTTIKEK-DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSAC 244

Query: 242 GDVGNTMDGRSLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIF------------ 301
             + N   GR +  +  +  +  NL +   ++DMY K G +++A  +F            
Sbjct: 245 AKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWT 304

Query: 302 -------------------NEVAEKDVIVWNCLIDNYAKNGLIKKAVASLH-LMKHEGMK 361
                              N + +KD++ WN LI  Y +NG   +A+   H L   + MK
Sbjct: 305 TMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMK 364

Query: 362 PNSSTLAGLISACAISGAVSPGKYLANYADNEGLDLDVVLGTTLISMYAKFGFLDKAIDI 421
            N  TL   +SACA  GA+  G+++ +Y    G+ ++  + + LI MY+K G L+K+ ++
Sbjct: 365 LNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREV 424

Query: 422 FDKMKDKDVKTWTAMITGYGDHGQTRKVMETLYRMEEEGFRPNEITFLAVLNAYSHGGIV 481
           F+ ++ +DV  W+AMI G   HG   + ++  Y+M+E   +PN +TF  V  A SH G+V
Sbjct: 425 FNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLV 484

Query: 482 AEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLLEEAHKLIKSLPSTKGDITGWRTLL 541
            E    F +M   YGI P+ +HY CI+D+LGR+G LE+A K I+++P      + W  LL
Sbjct: 485 DEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMP-IPPSTSVWGALL 544

Query: 542 AACRVYGDVELGETVKRKLVDLNDEHPADSMLLSSTYAIAGRLSDYTQYQLRKEGNKVKE 591
            AC+++ ++ L E    +L++L   +    +LLS+ YA  G+  + +  +LRK       
Sbjct: 545 GACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVS--ELRK------- 604

[Close]

BLAST of CSPI05G07720 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 317.0 bits (811), Expect = 3.2e-86
Identity = 170/544 (31.25%), Postives = 304/544 (55.88%), Query Frame = 0


Query: 33  SLLESCNGTSKISQIHCYMVKTALDLDPFTLSKLL--ASAILDIKYAASIFREIRNPNLF 92
           SL++S    +++ QIH  ++   L    F ++KL+  +S+  DI +A  +F ++  P +F
Sbjct: 26  SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIF 85

Query: 93  MFNTMLRGYSNSNDSKQAFVIFNDLRNQDFLPDRFSFITTLKACARELAIHVGKGIHGIV 152
            +N ++RGYS +N  + A +++++++     PD F+F   LKAC+    + +G+ +H  V
Sbjct: 86  PWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145

Query: 153 HKSGHGLFNDVNNIILHFYGACEQIKDAHKLFDEIS-QRNDLVSWNTLMDGYLRASQPIV 212
            + G      V N ++  Y  C ++  A  +F+ +      +VSW  ++  Y +  +P+ 
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205

Query: 213 VLDTFRQMCRRGLIANTGTLLSVASAVGDVGNTMDGRSLYGHCIKLGLGSNLRVVTCLID 272
            L+ F QM +  +  +   L+SV +A   + +   GRS++   +K+GL     ++  L  
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265

Query: 273 MYGKFGDLDEAGTIFNEVAEKDVIVWNCLIDNYAKNGLIKKAVASLHLMKHEGMKPNSST 332
           MY K G +  A  +F+++   ++I+WN +I  YAKNG  ++A+   H M ++ ++P++ +
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325

Query: 333 LAGLISACAISGAVSPGKYLANYADNEGLDLDVVLGTTLISMYAKFGFLDKAIDIFDKMK 392
           +   ISACA  G++   + +  Y        DV + + LI M+AK G ++ A  +FD+  
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385

Query: 393 DKDVKTWTAMITGYGDHGQTRKVMETLYRMEEEGFRPNEITFLAVLNAYSHGGIVAEGMK 452
           D+DV  W+AMI GYG HG+ R+ +     ME  G  PN++TFL +L A +H G+V EG  
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445

Query: 453 CFKRMVYEYGITPKIEHYGCIIDLLGRAGLLEEAHKLIKSLPSTKGDITGWRTLLAACRV 512
            F RM  ++ I P+ +HY C+IDLLGRAG L++A+++IK +P   G +T W  LL+AC+ 
Sbjct: 446 FFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG-VTVWGALLSACKK 505

Query: 513 YGDVELGETVKRKLVDLNDEHPADSMLLSSTYAIAGRLSDYTQYQLRKEGNKVKEANGSS 572
           +  VELGE   ++L  ++  +    + LS+ YA A       + ++R +   + +  G S
Sbjct: 506 HRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCS 565

Query: 573 QVQI 574
            V++
Sbjct: 566 WVEV 567

[Close]

BLAST of CSPI05G07720 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 315.5 bits (807), Expect = 9.3e-86
Identity = 180/581 (30.98%), Postives = 303/581 (52.15%), Query Frame = 0


Query: 31  LLSLLESCNGTSKISQIHCYMVKTALDLDPFTLSKLLASAILD----IKYAASIFREIRN 90
           LLSLLE C     + QI   M+   L LDPF  S+L+A   L     + Y+  I + I N
Sbjct: 56  LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIEN 115

Query: 91  PNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQ---DFLPDRFSFITTLKACARELAIHVG 150
           PN+F +N  +RG+S S + K++F+++  +      +  PD F++    K CA      +G
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175

Query: 151 KGIHGIVHKSGHGLFNDVNNIILHFYGACEQIKDAHKLFDEISQRNDLVSWNTLMDGYLR 210
             I G V K    L + V+N  +H + +C  +++A K+FDE S   DLVSWN L++GY +
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDE-SPVRDLVSWNCLINGYKK 235

Query: 211 ASQPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDVGNTMDGRSLYGHCIKLGLGSNLRV 270
             +    +  ++ M   G+  +  T++ + S+   +G+   G+  Y +  + GL   + +
Sbjct: 236 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 295

Query: 271 VTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLIDNYAKNGLI--------------- 330
           V  L+DM+ K GD+ EA  IF+ + ++ ++ W  +I  YA+ GL+               
Sbjct: 296 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 355

Query: 331 ----------------KKAVASLHLMKHEGMKPNSSTLAGLISACAISGAVSPGKYLANY 390
                           + A+A    M+    KP+  T+   +SAC+  GA+  G ++  Y
Sbjct: 356 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 415

Query: 391 ADNEGLDLDVVLGTTLISMYAKFGFLDKAIDIFDKMKDKDVKTWTAMITGYGDHGQTRKV 450
            +   L L+V LGT+L+ MYAK G + +A+ +F  ++ ++  T+TA+I G   HG     
Sbjct: 416 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 475

Query: 451 METLYRMEEEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIID 510
           +     M + G  P+EITF+ +L+A  HGG++  G   F +M   + + P+++HY  ++D
Sbjct: 476 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 535

Query: 511 LLGRAGLLEEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPA 570
           LLGRAGLLEEA +L++S+P  + D   W  LL  CR++G+VELGE   +KL++L+     
Sbjct: 536 LLGRAGLLEEADRLMESMP-MEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSG 595

Query: 571 DSMLLSSTYAIAGRLSDYTQYQLRKEGNKVKEANGSSQVQI 574
             +LL   Y  A    D  + +       V++  G S +++
Sbjct: 596 IYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEV 634

The following BLAST results are available for this feature:

BLAST of CSPI05G07720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVG8	1.2e-165	51.13	Pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Arabidop...	[more]
Q9LN01	3.8e-92	32.79	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
O82380	6.3e-87	30.51	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q9LTV8	4.5e-85	31.25	Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX...	[more]
Q9SJZ3	1.3e-84	30.98	Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop...	[more]

BLAST of CSPI05G07720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL36	0.0e+00	98.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168810 PE=4 SV=1	[more]
A0A1S3CTA0	4.1e-307	90.51	pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Cucumis ...	[more]
A0A5A7UGZ7	1.0e-281	90.74	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1DA73	9.6e-264	77.63	pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Momordic...	[more]
A0A6J1HTY2	2.1e-263	77.83	pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Cucurbit...	[more]

BLAST of CSPI05G07720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143729.1	0.0e+00	98.65	pentatricopeptide repeat-containing protein At1g26900, mitochondrial [Cucumis sa...	[more]
XP_008467317.1	8.5e-307	90.51	PREDICTED: pentatricopeptide repeat-containing protein At1g26900, mitochondrial ...	[more]
KAA0055102.1	2.1e-281	90.74	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_038906998.1	8.3e-278	82.91	pentatricopeptide repeat-containing protein At1g26900, mitochondrial [Benincasa ...	[more]
XP_023542006.1	1.3e-267	78.51	pentatricopeptide repeat-containing protein At1g26900, mitochondrial [Cucurbita ...	[more]

BLAST of CSPI05G07720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26900.1	8.2e-167	51.13	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G08070.1	2.7e-93	32.79	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G29760.1	4.5e-88	30.51	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G12770.1	3.2e-86	31.25	mitochondrial editing factor 22	[more]
AT2G22410.1	9.3e-86	30.98	SLOW GROWTH 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 293..326 e-value: 1.3E-6 score: 26.2 coord: 366..394 e-value: 7.8E-5 score: 20.6 coord: 91..123 e-value: 3.8E-5 score: 21.6 coord: 192..225 e-value: 5.4E-6 score: 24.2 coord: 395..428 e-value: 3.1E-7 score: 28.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 391..439 e-value: 3.3E-8 score: 33.6 coord: 87..136 e-value: 6.2E-9 score: 35.9 coord: 290..338 e-value: 5.4E-10 score: 39.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 466..489 e-value: 0.051 score: 13.9 coord: 192..222 e-value: 7.0E-5 score: 22.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 392..426 score: 11.882107
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 361..391 score: 9.13082
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 88..122 score: 9.941957
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 291..325 score: 11.32308
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 190..224 score: 10.150222
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 155..242 e-value: 1.3E-12 score: 49.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 406..589 e-value: 2.1E-24 score: 88.5 coord: 25..154 e-value: 1.3E-11 score: 46.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 243..357 e-value: 4.2E-20 score: 74.4
None	No IPR available	PANTHER	PTHR47924	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 39..589
None	No IPR available	PANTHER	PTHR47924:SF7	SUBFAMILY NOT NAMED	coord: 39..589

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G07720.1	CSPI05G07720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding