CSPI05G03540 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G03540
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionWD repeat-containing protein 91-like protein
LocationChr5: 3706732 .. 3707262 (-)
RNA-Seq ExpressionCSPI05G03540
SyntenyCSPI05G03540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCAACTTGGAGATTTGAGGAAGAATTTTGTGTTACTGAAACATATTAATGACAACCAAGAAACAAGCCTTCGTTACTGTGAAACCAAACTTCAAAACATTGTTCTTGGTTACCTTTCTTGGGGACGCCTCTTCTTCTTTGGCTTTTCTTTCTCCTTCAAGTGTAAGGATTGGTGGGTCGTTTTGTCTTTAACTCTGCTCTCTACCTTCCTCTACCTTTTGCTTTTCATGGATGCTGTCGTTATGTTATCTCGAACACACGATCAACTCGGCATAATTCGGAAGGAACTTACTGAAATTTGCCAACAAATTTTGGTAGCTCAAAACCAGGACACTGTGGATCTATCTATGGAGGGTGGAGAATGTTGTGATGGATTTGAATTGAGTTTCCACGAGAGGATGTTTATGCTCGATGAGTTTAGCGTTGTTGAGAATGGGAGGAAAGGGTATATTTATTTCATTGTCTGTGCCTTGCTTGTGATTACTGCTATTGAGTTATATGCTTGCAAGCGGTTATTGTGCAACTAA

mRNA sequence

ATGGCTCAACTTGGAGATTTGAGGAAGAATTTTGTGTTACTGAAACATATTAATGACAACCAAGAAACAAGCCTTCGTTACTGTGAAACCAAACTTCAAAACATTGTTCTTGGTTACCTTTCTTGGGGACGCCTCTTCTTCTTTGGCTTTTCTTTCTCCTTCAAGTGTAAGGATTGGTGGGTCGTTTTGTCTTTAACTCTGCTCTCTACCTTCCTCTACCTTTTGCTTTTCATGGATGCTGTCGTTATGTTATCTCGAACACACGATCAACTCGGCATAATTCGGAAGGAACTTACTGAAATTTGCCAACAAATTTTGGTAGCTCAAAACCAGGACACTGTGGATCTATCTATGGAGGGTGGAGAATGTTGTGATGGATTTGAATTGAGTTTCCACGAGAGGATGTTTATGCTCGATGAGTTTAGCGTTGTTGAGAATGGGAGGAAAGGGTATATTTATTTCATTGTCTGTGCCTTGCTTGTGATTACTGCTATTGAGTTATATGCTTGCAAGCGGTTATTGTGCAACTAA

Coding sequence (CDS)

ATGGCTCAACTTGGAGATTTGAGGAAGAATTTTGTGTTACTGAAACATATTAATGACAACCAAGAAACAAGCCTTCGTTACTGTGAAACCAAACTTCAAAACATTGTTCTTGGTTACCTTTCTTGGGGACGCCTCTTCTTCTTTGGCTTTTCTTTCTCCTTCAAGTGTAAGGATTGGTGGGTCGTTTTGTCTTTAACTCTGCTCTCTACCTTCCTCTACCTTTTGCTTTTCATGGATGCTGTCGTTATGTTATCTCGAACACACGATCAACTCGGCATAATTCGGAAGGAACTTACTGAAATTTGCCAACAAATTTTGGTAGCTCAAAACCAGGACACTGTGGATCTATCTATGGAGGGTGGAGAATGTTGTGATGGATTTGAATTGAGTTTCCACGAGAGGATGTTTATGCTCGATGAGTTTAGCGTTGTTGAGAATGGGAGGAAAGGGTATATTTATTTCATTGTCTGTGCCTTGCTTGTGATTACTGCTATTGAGTTATATGCTTGCAAGCGGTTATTGTGCAACTAA

Protein sequence

MAQLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFSFKCKDWWVVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEGGECCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN*
Homology
BLAST of CSPI05G03540 vs. ExPASy TrEMBL
Match: A0A0A0KJZ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139810 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 3.7e-94
Identity = 175/176 (99.43%), Postives = 176/176 (100.00%), Query Frame = 0

Query: 1   MAQLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFSFKCKDWW 60
           MAQLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFSFKCKDWW
Sbjct: 78  MAQLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFSFKCKDWW 137

Query: 61  VVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEG 120
           VVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEG
Sbjct: 138 VVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEG 197

Query: 121 GECCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 177
           GECCDGFELSFHERMFMLD+FSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN
Sbjct: 198 GECCDGFELSFHERMFMLDQFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 253

BLAST of CSPI05G03540 vs. ExPASy TrEMBL
Match: A0A5A7TMJ1 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00790 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.1e-77
Identity = 149/174 (85.63%), Postives = 155/174 (89.08%), Query Frame = 0

Query: 3   QLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFSFKCKDWWVV 62
           QLGDLR+NFVLLK INDNQETSLRYCETKLQN+VLGYLSWGRLFFFG SFSFKCKDWWV+
Sbjct: 46  QLGDLRRNFVLLKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFGVSFSFKCKDWWVI 105

Query: 63  LSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEGGE 122
           L+LTL  TF Y LLFMDAV+MLSRTHDQL IIRKEL EICQQILVAQNQD V LSME GE
Sbjct: 106 LALTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQILVAQNQDNVGLSMEAGE 165

Query: 123 CCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 177
             DGFELSFHERMFMLD+F VVE GRK YIYFIVC LL ITAIELYACK LLCN
Sbjct: 166 DSDGFELSFHERMFMLDQFRVVETGRKVYIYFIVCPLLAITAIELYACKCLLCN 219

BLAST of CSPI05G03540 vs. ExPASy TrEMBL
Match: A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 4.0e-48
Identity = 109/176 (61.93%), Postives = 129/176 (73.30%), Query Frame = 0

Query: 4   LGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGF---SFSFKCKDWW 63
           LG+L + F  LK IN+ QE+ +RY ETK+QNIV GYL + RLFFFG    S SF CKDWW
Sbjct: 3   LGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKDWW 62

Query: 64  VVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEG 123
           V+L+L+LL +F+Y LLF+DAV ML RT  QL II KEL E+ QQILV++NQD V LSME 
Sbjct: 63  VILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSMET 122

Query: 124 GECCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 177
           GE   GFE  FHE+M MLD F +V  GRK YIYF V ALL +TAIELY  K +LCN
Sbjct: 123 GESSGGFEFGFHEKMLMLDHFRIV--GRKVYIYFTVSALLAVTAIELYVSKYVLCN 176

BLAST of CSPI05G03540 vs. ExPASy TrEMBL
Match: A0A6J1DX74 (uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023953 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 8.9e-48
Identity = 107/175 (61.14%), Postives = 127/175 (72.57%), Query Frame = 0

Query: 4   LGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFS--FSFKCKDWWV 63
           +G+LR+ F  LK IN+ QE+ +RY E K Q IV GYL   RLFFFG S   S KC DWWV
Sbjct: 3   VGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDWWV 62

Query: 64  VLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEGG 123
           +LSL+LL +F+Y LLF+DA   L +T  QL +I KEL E+CQQILVAQNQD VDL+MEGG
Sbjct: 63  ILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAMEGG 122

Query: 124 ECCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 177
           +  DGFE  FHE+M +LD F  V  GRK YIYF VCAL+ +TAIELY  K LLCN
Sbjct: 123 DFSDGFEFGFHEKMLVLDHFRFV--GRKVYIYFTVCALVAVTAIELYVSKYLLCN 175

BLAST of CSPI05G03540 vs. ExPASy TrEMBL
Match: A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 7.0e-37
Identity = 89/179 (49.72%), Postives = 119/179 (66.48%), Query Frame = 0

Query: 3   QLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFS----FKCKD 62
           + G+L++NF  LK + + QE+ ++Y E++ QNI + YL WGRLFFF  S +     KC D
Sbjct: 2   EFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCID 61

Query: 63  WWVVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQ-DTVDLS 122
           WW+VL L++   F+Y L F++AV ML R   Q+ II KE  EICQQILVA++Q D VDL+
Sbjct: 62  WWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDLA 121

Query: 123 MEGGECCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 177
           ME G+  DGF+ SFH ++     F +VE  RK YI   V ALL +TAIELYAC  L C+
Sbjct: 122 MEAGDSSDGFQFSFHVKLLEYGAFRIVE--RKFYICATVSALLAVTAIELYACSWLYCD 178

BLAST of CSPI05G03540 vs. NCBI nr
Match: KAE8647812.1 (hypothetical protein Csa_000331 [Cucumis sativus])

HSP 1 Score: 354.0 bits (907), Expect = 7.6e-94
Identity = 175/176 (99.43%), Postives = 176/176 (100.00%), Query Frame = 0

Query: 1   MAQLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFSFKCKDWW 60
           MAQLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFSFKCKDWW
Sbjct: 1   MAQLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFSFKCKDWW 60

Query: 61  VVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEG 120
           VVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEG
Sbjct: 61  VVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEG 120

Query: 121 GECCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 177
           GECCDGFELSFHERMFMLD+FSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN
Sbjct: 121 GECCDGFELSFHERMFMLDQFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 176

BLAST of CSPI05G03540 vs. NCBI nr
Match: KAA0042579.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05983.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 299.3 bits (765), Expect = 2.2e-77
Identity = 149/174 (85.63%), Postives = 155/174 (89.08%), Query Frame = 0

Query: 3   QLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFSFKCKDWWVV 62
           QLGDLR+NFVLLK INDNQETSLRYCETKLQN+VLGYLSWGRLFFFG SFSFKCKDWWV+
Sbjct: 46  QLGDLRRNFVLLKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFGVSFSFKCKDWWVI 105

Query: 63  LSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEGGE 122
           L+LTL  TF Y LLFMDAV+MLSRTHDQL IIRKEL EICQQILVAQNQD V LSME GE
Sbjct: 106 LALTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQILVAQNQDNVGLSMEAGE 165

Query: 123 CCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 177
             DGFELSFHERMFMLD+F VVE GRK YIYFIVC LL ITAIELYACK LLCN
Sbjct: 166 DSDGFELSFHERMFMLDQFRVVETGRKVYIYFIVCPLLAITAIELYACKCLLCN 219

BLAST of CSPI05G03540 vs. NCBI nr
Match: XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])

HSP 1 Score: 201.1 bits (510), Expect = 8.2e-48
Identity = 109/176 (61.93%), Postives = 129/176 (73.30%), Query Frame = 0

Query: 4   LGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGF---SFSFKCKDWW 63
           LG+L + F  LK IN+ QE+ +RY ETK+QNIV GYL + RLFFFG    S SF CKDWW
Sbjct: 3   LGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKDWW 62

Query: 64  VVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEG 123
           V+L+L+LL +F+Y LLF+DAV ML RT  QL II KEL E+ QQILV++NQD V LSME 
Sbjct: 63  VILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSMET 122

Query: 124 GECCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 177
           GE   GFE  FHE+M MLD F +V  GRK YIYF V ALL +TAIELY  K +LCN
Sbjct: 123 GESSGGFEFGFHEKMLMLDHFRIV--GRKVYIYFTVSALLAVTAIELYVSKYVLCN 176

BLAST of CSPI05G03540 vs. NCBI nr
Match: XP_022157176.1 (uncharacterized protein LOC111023953 isoform X2 [Momordica charantia])

HSP 1 Score: 199.9 bits (507), Expect = 1.8e-47
Identity = 107/175 (61.14%), Postives = 127/175 (72.57%), Query Frame = 0

Query: 4   LGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFS--FSFKCKDWWV 63
           +G+LR+ F  LK IN+ QE+ +RY E K Q IV GYL   RLFFFG S   S KC DWWV
Sbjct: 3   VGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDWWV 62

Query: 64  VLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEGG 123
           +LSL+LL +F+Y LLF+DA   L +T  QL +I KEL E+CQQILVAQNQD VDL+MEGG
Sbjct: 63  ILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAMEGG 122

Query: 124 ECCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 177
           +  DGFE  FHE+M +LD F  V  GRK YIYF VCAL+ +TAIELY  K LLCN
Sbjct: 123 DFSDGFEFGFHEKMLVLDHFRFV--GRKVYIYFTVCALVAVTAIELYVSKYLLCN 175

BLAST of CSPI05G03540 vs. NCBI nr
Match: KAG7016840.1 (hypothetical protein SDJN02_21951, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 180.6 bits (457), Expect = 1.1e-41
Identity = 96/173 (55.49%), Postives = 122/173 (70.52%), Query Frame = 0

Query: 5   GDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFS--FSFKCKDWWVV 64
           G+L++    L  +N+ QET + Y + K+QNIV GYL W RLFF+G S   SFKC +WWV+
Sbjct: 39  GELKRRIKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFFYGISQALSFKCNNWWVI 98

Query: 65  LSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEGGE 124
           L+L+LL  F+Y LLF+DA+ ML R   QL II KEL E CQQ L+ +N+D +DL +E GE
Sbjct: 99  LALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDL-VEAGE 158

Query: 125 CCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLC 176
            CD FE  FH++M MLD  ++V  GR  YIYFIVCALL + AIELYA K LLC
Sbjct: 159 SCDRFEFGFHKKMLMLDHSTIV--GRNVYIYFIVCALLAVAAIELYAYKYLLC 208

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KJZ33.7e-9499.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139810 PE=4 SV=1[more]
A0A5A7TMJ11.1e-7785.63WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... [more]
A0A6J1DSQ04.0e-4861.93uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DX748.9e-4861.14uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1DS877.0e-3749.72uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
Match NameE-valueIdentityDescription
KAE8647812.17.6e-9499.43hypothetical protein Csa_000331 [Cucumis sativus][more]
KAA0042579.12.2e-7785.63WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... [more]
XP_022157182.18.2e-4861.93uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... [more]
XP_022157176.11.8e-4761.14uncharacterized protein LOC111023953 isoform X2 [Momordica charantia][more]
KAG7016840.11.1e-4155.49hypothetical protein SDJN02_21951, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33287:SF8SUBFAMILY NOT NAMEDcoord: 1..176
NoneNo IPR availablePANTHERPTHR33287OS03G0453550 PROTEINcoord: 1..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G03540.1CSPI05G03540.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane