Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCAACTTGGAGATTTGAGGAAGAATTTTGTGTTACTGAAACATATTAATGACAACCAAGAAACAAGCCTTCGTTACTGTGAAACCAAACTTCAAAACATTGTTCTTGGTTACCTTTCTTGGGGACGCCTCTTCTTCTTTGGCTTTTCTTTCTCCTTCAAGTGTAAGGATTGGTGGGTCGTTTTGTCTTTAACTCTGCTCTCTACCTTCCTCTACCTTTTGCTTTTCATGGATGCTGTCGTTATGTTATCTCGAACACACGATCAACTCGGCATAATTCGGAAGGAACTTACTGAAATTTGCCAACAAATTTTGGTAGCTCAAAACCAGGACACTGTGGATCTATCTATGGAGGGTGGAGAATGTTGTGATGGATTTGAATTGAGTTTCCACGAGAGGATGTTTATGCTCGATGAGTTTAGCGTTGTTGAGAATGGGAGGAAAGGGTATATTTATTTCATTGTCTGTGCCTTGCTTGTGATTACTGCTATTGAGTTATATGCTTGCAAGCGGTTATTGTGCAACTAA
mRNA sequence
ATGGCTCAACTTGGAGATTTGAGGAAGAATTTTGTGTTACTGAAACATATTAATGACAACCAAGAAACAAGCCTTCGTTACTGTGAAACCAAACTTCAAAACATTGTTCTTGGTTACCTTTCTTGGGGACGCCTCTTCTTCTTTGGCTTTTCTTTCTCCTTCAAGTGTAAGGATTGGTGGGTCGTTTTGTCTTTAACTCTGCTCTCTACCTTCCTCTACCTTTTGCTTTTCATGGATGCTGTCGTTATGTTATCTCGAACACACGATCAACTCGGCATAATTCGGAAGGAACTTACTGAAATTTGCCAACAAATTTTGGTAGCTCAAAACCAGGACACTGTGGATCTATCTATGGAGGGTGGAGAATGTTGTGATGGATTTGAATTGAGTTTCCACGAGAGGATGTTTATGCTCGATGAGTTTAGCGTTGTTGAGAATGGGAGGAAAGGGTATATTTATTTCATTGTCTGTGCCTTGCTTGTGATTACTGCTATTGAGTTATATGCTTGCAAGCGGTTATTGTGCAACTAA
Coding sequence (CDS)
ATGGCTCAACTTGGAGATTTGAGGAAGAATTTTGTGTTACTGAAACATATTAATGACAACCAAGAAACAAGCCTTCGTTACTGTGAAACCAAACTTCAAAACATTGTTCTTGGTTACCTTTCTTGGGGACGCCTCTTCTTCTTTGGCTTTTCTTTCTCCTTCAAGTGTAAGGATTGGTGGGTCGTTTTGTCTTTAACTCTGCTCTCTACCTTCCTCTACCTTTTGCTTTTCATGGATGCTGTCGTTATGTTATCTCGAACACACGATCAACTCGGCATAATTCGGAAGGAACTTACTGAAATTTGCCAACAAATTTTGGTAGCTCAAAACCAGGACACTGTGGATCTATCTATGGAGGGTGGAGAATGTTGTGATGGATTTGAATTGAGTTTCCACGAGAGGATGTTTATGCTCGATGAGTTTAGCGTTGTTGAGAATGGGAGGAAAGGGTATATTTATTTCATTGTCTGTGCCTTGCTTGTGATTACTGCTATTGAGTTATATGCTTGCAAGCGGTTATTGTGCAACTAA
Protein sequence
MAQLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFSFKCKDWWVVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEGGECCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN*
Homology
BLAST of CSPI05G03540 vs. ExPASy TrEMBL
Match:
A0A0A0KJZ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139810 PE=4 SV=1)
HSP 1 Score: 354.0 bits (907), Expect = 3.7e-94
Identity = 175/176 (99.43%), Postives = 176/176 (100.00%), Query Frame = 0
Query: 1 MAQLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFSFKCKDWW 60
MAQLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFSFKCKDWW
Sbjct: 78 MAQLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFSFKCKDWW 137
Query: 61 VVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEG 120
VVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEG
Sbjct: 138 VVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEG 197
Query: 121 GECCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 177
GECCDGFELSFHERMFMLD+FSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN
Sbjct: 198 GECCDGFELSFHERMFMLDQFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 253
BLAST of CSPI05G03540 vs. ExPASy TrEMBL
Match:
A0A5A7TMJ1 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00790 PE=4 SV=1)
HSP 1 Score: 299.3 bits (765), Expect = 1.1e-77
Identity = 149/174 (85.63%), Postives = 155/174 (89.08%), Query Frame = 0
Query: 3 QLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFSFKCKDWWVV 62
QLGDLR+NFVLLK INDNQETSLRYCETKLQN+VLGYLSWGRLFFFG SFSFKCKDWWV+
Sbjct: 46 QLGDLRRNFVLLKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFGVSFSFKCKDWWVI 105
Query: 63 LSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEGGE 122
L+LTL TF Y LLFMDAV+MLSRTHDQL IIRKEL EICQQILVAQNQD V LSME GE
Sbjct: 106 LALTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQILVAQNQDNVGLSMEAGE 165
Query: 123 CCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 177
DGFELSFHERMFMLD+F VVE GRK YIYFIVC LL ITAIELYACK LLCN
Sbjct: 166 DSDGFELSFHERMFMLDQFRVVETGRKVYIYFIVCPLLAITAIELYACKCLLCN 219
BLAST of CSPI05G03540 vs. ExPASy TrEMBL
Match:
A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)
HSP 1 Score: 201.1 bits (510), Expect = 4.0e-48
Identity = 109/176 (61.93%), Postives = 129/176 (73.30%), Query Frame = 0
Query: 4 LGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGF---SFSFKCKDWW 63
LG+L + F LK IN+ QE+ +RY ETK+QNIV GYL + RLFFFG S SF CKDWW
Sbjct: 3 LGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKDWW 62
Query: 64 VVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEG 123
V+L+L+LL +F+Y LLF+DAV ML RT QL II KEL E+ QQILV++NQD V LSME
Sbjct: 63 VILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSMET 122
Query: 124 GECCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 177
GE GFE FHE+M MLD F +V GRK YIYF V ALL +TAIELY K +LCN
Sbjct: 123 GESSGGFEFGFHEKMLMLDHFRIV--GRKVYIYFTVSALLAVTAIELYVSKYVLCN 176
BLAST of CSPI05G03540 vs. ExPASy TrEMBL
Match:
A0A6J1DX74 (uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023953 PE=4 SV=1)
HSP 1 Score: 199.9 bits (507), Expect = 8.9e-48
Identity = 107/175 (61.14%), Postives = 127/175 (72.57%), Query Frame = 0
Query: 4 LGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFS--FSFKCKDWWV 63
+G+LR+ F LK IN+ QE+ +RY E K Q IV GYL RLFFFG S S KC DWWV
Sbjct: 3 VGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDWWV 62
Query: 64 VLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEGG 123
+LSL+LL +F+Y LLF+DA L +T QL +I KEL E+CQQILVAQNQD VDL+MEGG
Sbjct: 63 ILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAMEGG 122
Query: 124 ECCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 177
+ DGFE FHE+M +LD F V GRK YIYF VCAL+ +TAIELY K LLCN
Sbjct: 123 DFSDGFEFGFHEKMLVLDHFRFV--GRKVYIYFTVCALVAVTAIELYVSKYLLCN 175
BLAST of CSPI05G03540 vs. ExPASy TrEMBL
Match:
A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)
HSP 1 Score: 163.7 bits (413), Expect = 7.0e-37
Identity = 89/179 (49.72%), Postives = 119/179 (66.48%), Query Frame = 0
Query: 3 QLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFS----FKCKD 62
+ G+L++NF LK + + QE+ ++Y E++ QNI + YL WGRLFFF S + KC D
Sbjct: 2 EFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCID 61
Query: 63 WWVVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQ-DTVDLS 122
WW+VL L++ F+Y L F++AV ML R Q+ II KE EICQQILVA++Q D VDL+
Sbjct: 62 WWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDLA 121
Query: 123 MEGGECCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 177
ME G+ DGF+ SFH ++ F +VE RK YI V ALL +TAIELYAC L C+
Sbjct: 122 MEAGDSSDGFQFSFHVKLLEYGAFRIVE--RKFYICATVSALLAVTAIELYACSWLYCD 178
BLAST of CSPI05G03540 vs. NCBI nr
Match:
KAE8647812.1 (hypothetical protein Csa_000331 [Cucumis sativus])
HSP 1 Score: 354.0 bits (907), Expect = 7.6e-94
Identity = 175/176 (99.43%), Postives = 176/176 (100.00%), Query Frame = 0
Query: 1 MAQLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFSFKCKDWW 60
MAQLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFSFKCKDWW
Sbjct: 1 MAQLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFSFKCKDWW 60
Query: 61 VVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEG 120
VVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEG
Sbjct: 61 VVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEG 120
Query: 121 GECCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 177
GECCDGFELSFHERMFMLD+FSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN
Sbjct: 121 GECCDGFELSFHERMFMLDQFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 176
BLAST of CSPI05G03540 vs. NCBI nr
Match:
KAA0042579.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05983.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 299.3 bits (765), Expect = 2.2e-77
Identity = 149/174 (85.63%), Postives = 155/174 (89.08%), Query Frame = 0
Query: 3 QLGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFSFSFKCKDWWVV 62
QLGDLR+NFVLLK INDNQETSLRYCETKLQN+VLGYLSWGRLFFFG SFSFKCKDWWV+
Sbjct: 46 QLGDLRRNFVLLKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFGVSFSFKCKDWWVI 105
Query: 63 LSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEGGE 122
L+LTL TF Y LLFMDAV+MLSRTHDQL IIRKEL EICQQILVAQNQD V LSME GE
Sbjct: 106 LALTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQILVAQNQDNVGLSMEAGE 165
Query: 123 CCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 177
DGFELSFHERMFMLD+F VVE GRK YIYFIVC LL ITAIELYACK LLCN
Sbjct: 166 DSDGFELSFHERMFMLDQFRVVETGRKVYIYFIVCPLLAITAIELYACKCLLCN 219
BLAST of CSPI05G03540 vs. NCBI nr
Match:
XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])
HSP 1 Score: 201.1 bits (510), Expect = 8.2e-48
Identity = 109/176 (61.93%), Postives = 129/176 (73.30%), Query Frame = 0
Query: 4 LGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGF---SFSFKCKDWW 63
LG+L + F LK IN+ QE+ +RY ETK+QNIV GYL + RLFFFG S SF CKDWW
Sbjct: 3 LGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKDWW 62
Query: 64 VVLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEG 123
V+L+L+LL +F+Y LLF+DAV ML RT QL II KEL E+ QQILV++NQD V LSME
Sbjct: 63 VILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSMET 122
Query: 124 GECCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 177
GE GFE FHE+M MLD F +V GRK YIYF V ALL +TAIELY K +LCN
Sbjct: 123 GESSGGFEFGFHEKMLMLDHFRIV--GRKVYIYFTVSALLAVTAIELYVSKYVLCN 176
BLAST of CSPI05G03540 vs. NCBI nr
Match:
XP_022157176.1 (uncharacterized protein LOC111023953 isoform X2 [Momordica charantia])
HSP 1 Score: 199.9 bits (507), Expect = 1.8e-47
Identity = 107/175 (61.14%), Postives = 127/175 (72.57%), Query Frame = 0
Query: 4 LGDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFS--FSFKCKDWWV 63
+G+LR+ F LK IN+ QE+ +RY E K Q IV GYL RLFFFG S S KC DWWV
Sbjct: 3 VGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDWWV 62
Query: 64 VLSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEGG 123
+LSL+LL +F+Y LLF+DA L +T QL +I KEL E+CQQILVAQNQD VDL+MEGG
Sbjct: 63 ILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAMEGG 122
Query: 124 ECCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLCN 177
+ DGFE FHE+M +LD F V GRK YIYF VCAL+ +TAIELY K LLCN
Sbjct: 123 DFSDGFEFGFHEKMLVLDHFRFV--GRKVYIYFTVCALVAVTAIELYVSKYLLCN 175
BLAST of CSPI05G03540 vs. NCBI nr
Match:
KAG7016840.1 (hypothetical protein SDJN02_21951, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 180.6 bits (457), Expect = 1.1e-41
Identity = 96/173 (55.49%), Postives = 122/173 (70.52%), Query Frame = 0
Query: 5 GDLRKNFVLLKHINDNQETSLRYCETKLQNIVLGYLSWGRLFFFGFS--FSFKCKDWWVV 64
G+L++ L +N+ QET + Y + K+QNIV GYL W RLFF+G S SFKC +WWV+
Sbjct: 39 GELKRRIKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFFYGISQALSFKCNNWWVI 98
Query: 65 LSLTLLSTFLYLLLFMDAVVMLSRTHDQLGIIRKELTEICQQILVAQNQDTVDLSMEGGE 124
L+L+LL F+Y LLF+DA+ ML R QL II KEL E CQQ L+ +N+D +DL +E GE
Sbjct: 99 LALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDL-VEAGE 158
Query: 125 CCDGFELSFHERMFMLDEFSVVENGRKGYIYFIVCALLVITAIELYACKRLLC 176
CD FE FH++M MLD ++V GR YIYFIVCALL + AIELYA K LLC
Sbjct: 159 SCDRFEFGFHKKMLMLDHSTIV--GRNVYIYFIVCALLAVAAIELYAYKYLLC 208
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KJZ3 | 3.7e-94 | 99.43 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139810 PE=4 SV=1 | [more] |
A0A5A7TMJ1 | 1.1e-77 | 85.63 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A6J1DSQ0 | 4.0e-48 | 61.93 | uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DX74 | 8.9e-48 | 61.14 | uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1DS87 | 7.0e-37 | 49.72 | uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
Match Name | E-value | Identity | Description | |
KAE8647812.1 | 7.6e-94 | 99.43 | hypothetical protein Csa_000331 [Cucumis sativus] | [more] |
KAA0042579.1 | 2.2e-77 | 85.63 | WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... | [more] |
XP_022157182.1 | 8.2e-48 | 61.93 | uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... | [more] |
XP_022157176.1 | 1.8e-47 | 61.14 | uncharacterized protein LOC111023953 isoform X2 [Momordica charantia] | [more] |
KAG7016840.1 | 1.1e-41 | 55.49 | hypothetical protein SDJN02_21951, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |