CSPI05G01590 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G01590
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr5: 2229329 .. 2229538 (+)
RNA-Seq ExpressionCSPI05G01590
SyntenyCSPI05G01590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACACTTCTCCACCTCCGACACAGCATCATTACAACCTCTTTATTGTTCTTCCGCACAACTTTTCCATTTCTGGCACAACGACTTCTACGGCACCATTTACGCGACCCCAACCACACAAGAATCGACCGACACCAACAACCATAGCGTTGAGCATGCCACTAAAGTTGGGCGAGAGCAATGTCAACAATATCGAGCAAGACACTAA

mRNA sequence

ATGTCACACTTCTCCACCTCCGACACAGCATCATTACAACCTCTTTATTGTTCTTCCGCACAACTTTTCCATTTCTGGCACAACGACTTCTACGGCACCATTTACGCGACCCCAACCACACAAGAATCGACCGACACCAACAACCATAGCGTTGAGCATGCCACTAAAGTTGGGCGAGAGCAATGTCAACAATATCGAGCAAGACACTAA

Coding sequence (CDS)

ATGTCACACTTCTCCACCTCCGACACAGCATCATTACAACCTCTTTATTGTTCTTCCGCACAACTTTTCCATTTCTGGCACAACGACTTCTACGGCACCATTTACGCGACCCCAACCACACAAGAATCGACCGACACCAACAACCATAGCGTTGAGCATGCCACTAAAGTTGGGCGAGAGCAATGTCAACAATATCGAGCAAGACACTAA

Protein sequence

MSHFSTSDTASLQPLYCSSAQLFHFWHNDFYGTIYATPTTQESTDTNNHSVEHATKVGREQCQQYRARH*
Homology
[Close]
BLAST of CSPI05G01590 vs. ExPASy TrEMBL
Match: A0A0A0KMR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G074690 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.6e-29
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0 

Query: 1  MSHFSTSDTASLQPLYCSSAQLFHFWHNDFYGTIYATPTTQESTDTNNHSVEHATKVGRE 60
          MSHFSTSDTASLQPLYCSSAQLFHFWHND YGTI+ATPTTQESTDTNNHSVEHATKVGRE
Sbjct: 1  MSHFSTSDTASLQPLYCSSAQLFHFWHNDSYGTIHATPTTQESTDTNNHSVEHATKVGRE 60

Query: 61 QCQQYRARH 70
          Q QQYRARH
Sbjct: 61 QRQQYRARH 69

[Close]
BLAST of CSPI05G01590 vs. NCBI nr
Match: KGN49697.1 (hypothetical protein Csa_018478 [Cucumis sativus])

HSP 1 Score: 137.9 bits (346), Expect = 3.4e-29
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0 

Query: 1  MSHFSTSDTASLQPLYCSSAQLFHFWHNDFYGTIYATPTTQESTDTNNHSVEHATKVGRE 60
          MSHFSTSDTASLQPLYCSSAQLFHFWHND YGTI+ATPTTQESTDTNNHSVEHATKVGRE
Sbjct: 1  MSHFSTSDTASLQPLYCSSAQLFHFWHNDSYGTIHATPTTQESTDTNNHSVEHATKVGRE 60

Query: 61 QCQQYRARH 70
          Q QQYRARH
Sbjct: 61 QRQQYRARH 69

The following BLAST results are available for this feature:
BLAST of CSPI05G01590 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI05G01590 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMR01.6e-2995.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G074690 PE=4 SV=1[more]
BLAST of CSPI05G01590 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49697.13.4e-2995.65hypothetical protein Csa_018478 [Cucumis sativus][more]
BLAST of CSPI05G01590 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G01590.1CSPI05G01590.1mRNA