CSPI04G26620 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G26620
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Protein TPR1-like isoform X1
Location	Chr4: 23665787 .. 23666863 (-)
RNA-Seq Expression	CSPI04G26620
Synteny	CSPI04G26620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCGATCCCGATCCCGATCGTGCCTTGCTCTTCCTCATCCTCCAATTCCTCGACCACCAAAATCTCTCTGAGACTGCTCGCTCGTAAGAGATTTTTACTGTTATTATTTTGTATATATTCACACGTTTAGATGGTATACGTACGACTGATTGTGTAATTATTTCGTTTATTTTGTAGATTGGAATGTGAAACGGGATTGTTCTTCAACATGACTTATTTTGAGGAGCTGTTGAACTGTTGTGCTTATAACGAGGCTGAAAGCTACCTTTGTGGATTCACTGATATTCACGATAATATTTATTCCACAAAGATCTACTTTGGGATTAGAAAGCTCAAATTCCTTGAAGCACTAACAGAGTACGTATGCATCTATTATAAAATATTTAATTTGTGGGATTAATTAAAAGGACAAATAATTAACTTATGATGAAAACTATATGCAGTGGAGAGCGAGAGGTTGCTCGTGAAGTGGTTGAAAAGGACATAGAAATCTTCGATCAATATAATCCAGGGTTGGTCCAGCAAGCTTTTGAGCTTCTCCAAATGGACAACTTTATGCAAGTTTTCAAATTCCTTATGATTTTCCTCTCCTTAATGTTAAAATTACGGATTTTGGTTCACACCACGTCGTAGTTTCTTGATATCTTTCATGCTCACTCTATTTATTATATGTTAGGATCTACAGATAGTAAACAAATATATACTAGATGGTTACTTCTTCATGTTTGATATTTCACGAAAATCTTAAGAAGAATAATGTAATCGAATTGGAATCAAAGGACCAAATTCGAACATATATTTGATGTCTATTTTTCAAGAACATGATGTAACATGTCATCGGTACTCATCATGAAATGCAGGTCTCACATGTTGCTTTCAAGTTACAGAAACATGAAAGAAGCAAGGAAAGTTGTGATGGAAAATATCAAGAAATGCATTGAAGCTAATCCTCTTCTTGAAGGGAAGCTTTCATTTCCGCCGCTTTCGACGACGCTGCAAGCCTTCTACACGGAGGCTATGGCTTCCCGGAGCAGGCCACCGGCGACTTGCAGGCGAGATTTCAAAGATTGA

mRNA sequence

ATGGCCACCGATCCCGATCCCGATCGTGCCTTGCTCTTCCTCATCCTCCAATTCCTCGACCACCAAAATCTCTCTGAGACTGCTCGCTCATTGGAATGTGAAACGGGATTGTTCTTCAACATGACTTATTTTGAGGAGCTGTTGAACTGTTGTGCTTATAACGAGGCTGAAAGCTACCTTTGTGGATTCACTGATATTCACGATAATATTTATTCCACAAAGATCTACTTTGGGATTAGAAAGCTCAAATTCCTTGAAGCACTAACAGATGGAGAGCGAGAGGTTGCTCGTGAAGTGGTTGAAAAGGACATAGAAATCTTCGATCAATATAATCCAGGGTCTCACATGTTGCTTTCAAGTTACAGAAACATGAAAGAAGCAAGGAAAGTTGTGATGGAAAATATCAAGAAATGCATTGAAGCTAATCCTCTTCTTGAAGGGAAGCTTTCATTTCCGCCGCTTTCGACGACGCTGCAAGCCTTCTACACGGAGGCTATGGCTTCCCGGAGCAGGCCACCGGCGACTTGCAGGCGAGATTTCAAAGATTGA

Coding sequence (CDS)

ATGGCCACCGATCCCGATCCCGATCGTGCCTTGCTCTTCCTCATCCTCCAATTCCTCGACCACCAAAATCTCTCTGAGACTGCTCGCTCATTGGAATGTGAAACGGGATTGTTCTTCAACATGACTTATTTTGAGGAGCTGTTGAACTGTTGTGCTTATAACGAGGCTGAAAGCTACCTTTGTGGATTCACTGATATTCACGATAATATTTATTCCACAAAGATCTACTTTGGGATTAGAAAGCTCAAATTCCTTGAAGCACTAACAGATGGAGAGCGAGAGGTTGCTCGTGAAGTGGTTGAAAAGGACATAGAAATCTTCGATCAATATAATCCAGGGTCTCACATGTTGCTTTCAAGTTACAGAAACATGAAAGAAGCAAGGAAAGTTGTGATGGAAAATATCAAGAAATGCATTGAAGCTAATCCTCTTCTTGAAGGGAAGCTTTCATTTCCGCCGCTTTCGACGACGCTGCAAGCCTTCTACACGGAGGCTATGGCTTCCCGGAGCAGGCCACCGGCGACTTGCAGGCGAGATTTCAAAGATTGA

Protein sequence

MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPGSHMLLSSYRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTTLQAFYTEAMASRSRPPATCRRDFKD*

Homology

[Close]

BLAST of CSPI04G26620 vs. ExPASy Swiss-Prot
Match: Q5NBT9 (Protein TPR1 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR1 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-29
Identity = 71/164 (43.29%), Postives = 96/164 (58.54%), Query Frame = 0


Query: 9   RALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHD 68
           R L+FLILQFLD +   ET   LE E+G FFNM YFEE ++   ++E E YL GFT + D
Sbjct: 6   RELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEEKVHAGEWDEVEKYLSGFTKVDD 65

Query: 69  NIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNP---------------G 128
           N YS KI+F IRK K+LEAL   +R  A +++ KD+++F  +N                 
Sbjct: 66  NRYSMKIFFEIRKQKYLEALDRHDRAKAVDILVKDLKVFSTFNEELYKEITQLLTLENFR 125

Query: 129 SHMLLSSYRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTT 158
            +  LS Y + K AR +++  +KK IEANPL   KL FP L  +
Sbjct: 126 ENEQLSKYGDTKSARSIMLIELKKLIEANPLFREKLVFPTLKAS 169

[Close]

BLAST of CSPI04G26620 vs. ExPASy Swiss-Prot
Match: Q0WV90 (Topless-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=TPR1 PE=1 SV=3)

HSP 1 Score: 130.6 bits (327), Expect = 1.8e-29
Identity = 71/164 (43.29%), Postives = 97/164 (59.15%), Query Frame = 0


Query: 9   RALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHD 68
           R L+FLILQFLD +   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + D
Sbjct: 6   RELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDD 65

Query: 69  NIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNP---------------G 128
           N YS KI+F IRK K+LEAL   +R  A +++ KD+++F  +N                 
Sbjct: 66  NRYSMKIFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFR 125

Query: 129 SHMLLSSYRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTT 158
            +  LS Y + K AR +++  +KK IEANPL   KL FP L T+
Sbjct: 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTS 169

[Close]

BLAST of CSPI04G26620 vs. ExPASy Swiss-Prot
Match: Q0J7U6 (Protein TOPLESS-RELATED PROTEIN 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR2 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.2e-29
Identity = 69/164 (42.07%), Postives = 96/164 (58.54%), Query Frame = 0


Query: 9   RALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHD 68
           R L+FLILQFLD +   ET   LE E+  +FNM +FE+L+    ++E E YL GFT + D
Sbjct: 6   RELVFLILQFLDEEKFKETVHKLEQESAFYFNMKHFEDLVQGGEWDEVEKYLSGFTKVED 65

Query: 69  NIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNP---------------G 128
           N YS KI+F IRK K+LEAL   +R  A E++ KD+++F  +N                 
Sbjct: 66  NRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFASFNEELFKEITQLLTLENFR 125

Query: 129 SHMLLSSYRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTT 158
            +  LS Y + K AR +++  +KK IEANPL   KL+FPP   +
Sbjct: 126 QNEQLSKYGDTKSARNIMLMELKKLIEANPLFRDKLNFPPFKVS 169

[Close]

BLAST of CSPI04G26620 vs. ExPASy Swiss-Prot
Match: Q94AI7 (Protein TOPLESS OS=Arabidopsis thaliana OX=3702 GN=TPL PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.1e-29
Identity = 70/161 (43.48%), Postives = 95/161 (59.01%), Query Frame = 0


Query: 9   RALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHD 68
           R L+FLILQFLD +   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + D
Sbjct: 6   RELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDD 65

Query: 69  NIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNP---------------G 128
           N YS KI+F IRK K+LEAL   +R  A +++ KD+++F  +N                 
Sbjct: 66  NRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFR 125

Query: 129 SHMLLSSYRNMKEARKVVMENIKKCIEANPLLEGKLSFPPL 155
            +  LS Y + K AR +++  +KK IEANPL   KL FP L
Sbjct: 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTL 166

[Close]

BLAST of CSPI04G26620 vs. ExPASy Swiss-Prot
Match: Q9LRZ0 (Topless-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=TPR2 PE=1 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 2.7e-28
Identity = 69/159 (43.40%), Postives = 92/159 (57.86%), Query Frame = 0


Query: 9   RALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHD 68
           R L+FLILQFLD +   E+   LE E+G FFN+ YFEE      ++E E YL GFT + D
Sbjct: 6   RELVFLILQFLDEEKFKESVHKLEQESGFFFNIKYFEEKALAGEWDEVEKYLSGFTKVDD 65

Query: 69  NIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNP---------------G 128
           N YS KI+F IRK K+LEAL   +R  A E++ KD+++F  +N                 
Sbjct: 66  NRYSMKIFFEIRKQKYLEALDRNDRAKAVEILAKDLKVFATFNEELYKEITQLLTLENFR 125

Query: 129 SHMLLSSYRNMKEARKVVMENIKKCIEANPLLEGKLSFP 153
            +  LS Y + K AR ++   +KK IEANPL   KL+FP
Sbjct: 126 ENEQLSKYGDTKSARSIMYTELKKLIEANPLFREKLAFP 164

[Close]

BLAST of CSPI04G26620 vs. ExPASy TrEMBL
Match: A0A0A0L5R0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652830 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 7.9e-100
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60
           MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPGSHMLLSS 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPGSHMLLSS
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPGSHMLLSS 120

Query: 121 YRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTTLQAFYTEAMASRSRPPATCRRDF 180
           YRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTTLQAFYTEAMASRSRPPATCRRDF
Sbjct: 121 YRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTTLQAFYTEAMASRSRPPATCRRDF 180

Query: 181 KD 183
           KD
Sbjct: 181 KD 182

[Close]

BLAST of CSPI04G26620 vs. ExPASy TrEMBL
Match: A0A5D3D8T8 (Protein TPR1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00900 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.3e-96
Identity = 175/182 (96.15%), Postives = 178/182 (97.80%), Query Frame = 0


Query: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60
           MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPGSHMLLSS 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEAL DGEREVAREVVEKDIEIFDQYNPGSH+LLSS
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS 120

Query: 121 YRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTTLQAFYTEAMASRSRPPATCRRDF 180
           Y+NMKEARKVVMENIKKCIEANPLL+GKLSFPPLSTTLQAFY EAMASR R PATCRRDF
Sbjct: 121 YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDF 180

Query: 181 KD 183
           KD
Sbjct: 181 KD 182

[Close]

BLAST of CSPI04G26620 vs. ExPASy TrEMBL
Match: E5GCC7 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.3e-96
Identity = 175/182 (96.15%), Postives = 178/182 (97.80%), Query Frame = 0


Query: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60
           MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPGSHMLLSS 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEAL DGEREVAREVVEKDIEIFDQYNPGSH+LLSS
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS 120

Query: 121 YRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTTLQAFYTEAMASRSRPPATCRRDF 180
           Y+NMKEARKVVMENIKKCIEANPLL+GKLSFPPLSTTLQAFY EAMASR R PATCRRDF
Sbjct: 121 YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDF 180

Query: 181 KD 183
           KD
Sbjct: 181 KD 182

[Close]

BLAST of CSPI04G26620 vs. ExPASy TrEMBL
Match: A0A1S3BVS3 (protein TPR1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493786 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.3e-96
Identity = 175/182 (96.15%), Postives = 178/182 (97.80%), Query Frame = 0


Query: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60
           MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPGSHMLLSS 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEAL DGEREVAREVVEKDIEIFDQYNPGSH+LLSS
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS 120

Query: 121 YRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTTLQAFYTEAMASRSRPPATCRRDF 180
           Y+NMKEARKVVMENIKKCIEANPLL+GKLSFPPLSTTLQAFY EAMASR R PATCRRDF
Sbjct: 121 YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDF 180

Query: 181 KD 183
           KD
Sbjct: 181 KD 182

[Close]

BLAST of CSPI04G26620 vs. ExPASy TrEMBL
Match: A0A1S3BUX9 (protein TPR1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493786 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 5.5e-93
Identity = 175/197 (88.83%), Postives = 178/197 (90.36%), Query Frame = 0


Query: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60
           MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPG------- 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEAL DGEREVAREVVEKDIEIFDQYNPG       
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGLVQQAFE 120

Query: 121 --------SHMLLSSYRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTTLQAFYTEA 180
                   SH+LLSSY+NMKEARKVVMENIKKCIEANPLL+GKLSFPPLSTTLQAFY EA
Sbjct: 121 LLQMDNFMSHILLSSYKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEA 180

Query: 181 MASRSRPPATCRRDFKD 183
           MASR R PATCRRDFKD
Sbjct: 181 MASRGRAPATCRRDFKD 197

[Close]

BLAST of CSPI04G26620 vs. NCBI nr
Match: KAE8649955.1 (hypothetical protein Csa_012980 [Cucumis sativus])

HSP 1 Score: 362.8 bits (930), Expect = 1.7e-96
Identity = 182/197 (92.39%), Postives = 182/197 (92.39%), Query Frame = 0


Query: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60
           MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPG------- 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPG       
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPGLVQQAFE 120

Query: 121 --------SHMLLSSYRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTTLQAFYTEA 180
                   SHMLLSSYRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTTLQAFYTEA
Sbjct: 121 LLQMDNFMSHMLLSSYRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTTLQAFYTEA 180

Query: 181 MASRSRPPATCRRDFKD 183
           MASRSRPPATCRRDFKD
Sbjct: 181 MASRSRPPATCRRDFKD 197

[Close]

BLAST of CSPI04G26620 vs. NCBI nr
Match: XP_008452906.1 (PREDICTED: protein TPR1-like isoform X2 [Cucumis melo] >ADN34126.1 hypothetical protein [Cucumis melo subsp. melo] >TYK19976.1 protein TPR1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 360.1 bits (923), Expect = 1.1e-95
Identity = 175/182 (96.15%), Postives = 178/182 (97.80%), Query Frame = 0


Query: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60
           MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPGSHMLLSS 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEAL DGEREVAREVVEKDIEIFDQYNPGSH+LLSS
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS 120

Query: 121 YRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTTLQAFYTEAMASRSRPPATCRRDF 180
           Y+NMKEARKVVMENIKKCIEANPLL+GKLSFPPLSTTLQAFY EAMASR R PATCRRDF
Sbjct: 121 YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDF 180

Query: 181 KD 183
           KD
Sbjct: 181 KD 182

[Close]

BLAST of CSPI04G26620 vs. NCBI nr
Match: XP_031740451.1 (protein TPR1 [Cucumis sativus])

HSP 1 Score: 353.6 bits (906), Expect = 1.0e-93
Identity = 182/221 (82.35%), Postives = 182/221 (82.35%), Query Frame = 0


Query: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60
           MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPG------- 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPG       
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPGLVQQAFE 120

Query: 121 --------------------------------SHMLLSSYRNMKEARKVVMENIKKCIEA 180
                                           SHMLLSSYRNMKEARKVVMENIKKCIEA
Sbjct: 121 LLQMDNFMQVFKFLMIFLSLMLKLRILVHTTSSHMLLSSYRNMKEARKVVMENIKKCIEA 180

Query: 181 NPLLEGKLSFPPLSTTLQAFYTEAMASRSRPPATCRRDFKD 183
           NPLLEGKLSFPPLSTTLQAFYTEAMASRSRPPATCRRDFKD
Sbjct: 181 NPLLEGKLSFPPLSTTLQAFYTEAMASRSRPPATCRRDFKD 221

[Close]

BLAST of CSPI04G26620 vs. NCBI nr
Match: XP_008452905.1 (PREDICTED: protein TPR1-like isoform X1 [Cucumis melo])

HSP 1 Score: 350.1 bits (897), Expect = 1.1e-92
Identity = 175/197 (88.83%), Postives = 178/197 (90.36%), Query Frame = 0


Query: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60
           MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPG------- 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEAL DGEREVAREVVEKDIEIFDQYNPG       
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGLVQQAFE 120

Query: 121 --------SHMLLSSYRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTTLQAFYTEA 180
                   SH+LLSSY+NMKEARKVVMENIKKCIEANPLL+GKLSFPPLSTTLQAFY EA
Sbjct: 121 LLQMDNFMSHILLSSYKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEA 180

Query: 181 MASRSRPPATCRRDFKD 183
           MASR R PATCRRDFKD
Sbjct: 181 MASRGRAPATCRRDFKD 197

[Close]

BLAST of CSPI04G26620 vs. NCBI nr
Match: KAA0064616.1 (protein TPR1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 342.8 bits (878), Expect = 1.8e-90
Identity = 175/216 (81.02%), Postives = 178/216 (82.41%), Query Frame = 0


Query: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60
           MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPG------- 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEAL DGEREVAREVVEKDIEIFDQYNPG       
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGLVQQAFE 120

Query: 121 ---------------------------SHMLLSSYRNMKEARKVVMENIKKCIEANPLLE 180
                                      SH+LLSSY+NMKEARKVVMENIKKCIEANPLL+
Sbjct: 121 LLQMDNFMQVFKFLIIFSLPNLKLRIWSHILLSSYKNMKEARKVVMENIKKCIEANPLLQ 180

Query: 181 GKLSFPPLSTTLQAFYTEAMASRSRPPATCRRDFKD 183
           GKLSFPPLSTTLQAFY EAMASR R PATCRRDFKD
Sbjct: 181 GKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDFKD 216

[Close]

BLAST of CSPI04G26620 vs. TAIR 10
Match: AT1G80490.1 (TOPLESS-related 1 )

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-30
Identity = 71/164 (43.29%), Postives = 97/164 (59.15%), Query Frame = 0


Query: 9   RALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHD 68
           R L+FLILQFLD +   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + D
Sbjct: 6   RELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDD 65

Query: 69  NIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNP---------------G 128
           N YS KI+F IRK K+LEAL   +R  A +++ KD+++F  +N                 
Sbjct: 66  NRYSMKIFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFR 125

Query: 129 SHMLLSSYRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTT 158
            +  LS Y + K AR +++  +KK IEANPL   KL FP L T+
Sbjct: 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTS 169

[Close]

BLAST of CSPI04G26620 vs. TAIR 10
Match: AT1G80490.2 (TOPLESS-related 1 )

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-30
Identity = 71/164 (43.29%), Postives = 97/164 (59.15%), Query Frame = 0


Query: 9   RALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHD 68
           R L+FLILQFLD +   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + D
Sbjct: 6   RELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDD 65

Query: 69  NIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNP---------------G 128
           N YS KI+F IRK K+LEAL   +R  A +++ KD+++F  +N                 
Sbjct: 66  NRYSMKIFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFR 125

Query: 129 SHMLLSSYRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTT 158
            +  LS Y + K AR +++  +KK IEANPL   KL FP L T+
Sbjct: 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTS 169

[Close]

BLAST of CSPI04G26620 vs. TAIR 10
Match: AT1G15750.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 129.4 bits (324), Expect = 2.9e-30
Identity = 70/161 (43.48%), Postives = 95/161 (59.01%), Query Frame = 0


Query: 9   RALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHD 68
           R L+FLILQFLD +   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + D
Sbjct: 6   RELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDD 65

Query: 69  NIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNP---------------G 128
           N YS KI+F IRK K+LEAL   +R  A +++ KD+++F  +N                 
Sbjct: 66  NRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFR 125

Query: 129 SHMLLSSYRNMKEARKVVMENIKKCIEANPLLEGKLSFPPL 155
            +  LS Y + K AR +++  +KK IEANPL   KL FP L
Sbjct: 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTL 166

[Close]

BLAST of CSPI04G26620 vs. TAIR 10
Match: AT1G15750.2 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 129.4 bits (324), Expect = 2.9e-30
Identity = 70/161 (43.48%), Postives = 95/161 (59.01%), Query Frame = 0


Query: 9   RALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHD 68
           R L+FLILQFLD +   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + D
Sbjct: 6   RELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDD 65

Query: 69  NIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNP---------------G 128
           N YS KI+F IRK K+LEAL   +R  A +++ KD+++F  +N                 
Sbjct: 66  NRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFR 125

Query: 129 SHMLLSSYRNMKEARKVVMENIKKCIEANPLLEGKLSFPPL 155
            +  LS Y + K AR +++  +KK IEANPL   KL FP L
Sbjct: 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTL 166

[Close]

BLAST of CSPI04G26620 vs. TAIR 10
Match: AT1G15750.3 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 129.4 bits (324), Expect = 2.9e-30
Identity = 70/161 (43.48%), Postives = 95/161 (59.01%), Query Frame = 0


Query: 9   RALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHD 68
           R L+FLILQFLD +   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + D
Sbjct: 6   RELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDD 65

Query: 69  NIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNP---------------G 128
           N YS KI+F IRK K+LEAL   +R  A +++ KD+++F  +N                 
Sbjct: 66  NRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFR 125

Query: 129 SHMLLSSYRNMKEARKVVMENIKKCIEANPLLEGKLSFPPL 155
            +  LS Y + K AR +++  +KK IEANPL   KL FP L
Sbjct: 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTL 166

The following BLAST results are available for this feature:

BLAST of CSPI04G26620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5NBT9	1.4e-29	43.29	Protein TPR1 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR1 PE=1 SV=1	[more]
Q0WV90	1.8e-29	43.29	Topless-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=TPR1 PE=1 SV=3	[more]
Q0J7U6	3.2e-29	42.07	Protein TOPLESS-RELATED PROTEIN 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TP...	[more]
Q94AI7	4.1e-29	43.48	Protein TOPLESS OS=Arabidopsis thaliana OX=3702 GN=TPL PE=1 SV=1	[more]
Q9LRZ0	2.7e-28	43.40	Topless-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=TPR2 PE=1 SV=2	[more]

BLAST of CSPI04G26620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5R0	7.9e-100	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652830 PE=4 SV=1	[more]
A0A5D3D8T8	5.3e-96	96.15	Protein TPR1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
E5GCC7	5.3e-96	96.15	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BVS3	5.3e-96	96.15	protein TPR1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493786 PE=4 SV=1	[more]
A0A1S3BUX9	5.5e-93	88.83	protein TPR1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493786 PE=4 SV=1	[more]

BLAST of CSPI04G26620 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649955.1	1.7e-96	92.39	hypothetical protein Csa_012980 [Cucumis sativus]	[more]
XP_008452906.1	1.1e-95	96.15	PREDICTED: protein TPR1-like isoform X2 [Cucumis melo] >ADN34126.1 hypothetical ...	[more]
XP_031740451.1	1.0e-93	82.35	protein TPR1 [Cucumis sativus]	[more]
XP_008452905.1	1.1e-92	88.83	PREDICTED: protein TPR1-like isoform X1 [Cucumis melo]	[more]
KAA0064616.1	1.8e-90	81.02	protein TPR1-like isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of CSPI04G26620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80490.1	1.3e-30	43.29	TOPLESS-related 1	[more]
AT1G80490.2	1.3e-30	43.29	TOPLESS-related 1	[more]
AT1G15750.1	2.9e-30	43.48	Transducin family protein / WD-40 repeat family protein	[more]
AT1G15750.2	2.9e-30	43.48	Transducin family protein / WD-40 repeat family protein	[more]
AT1G15750.3	2.9e-30	43.48	Transducin family protein / WD-40 repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006594	LIS1 homology motif	SMART	SM00667	Lish	coord: 7..39 e-value: 0.0016 score: 27.7
IPR006594	LIS1 homology motif	PROSITE	PS50896	LISH	coord: 7..39 score: 9.413857
IPR027728	Topless family	PANTHER	PTHR44083	TOPLESS-RELATED PROTEIN 1-RELATED	coord: 6..155
None	No IPR available	PANTHER	PTHR44083:SF26	1 ENHANCER LOCUS 2 PROTEIN, PUTATIVE-RELATED	coord: 6..155
IPR006595	CTLH, C-terminal LisH motif	PROSITE	PS50897	CTLH	coord: 38..95 score: 8.754301

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G26620.1	CSPI04G26620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0005515	protein binding