CSPI04G25580 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G25580
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	17.1 kDa class II heat shock protein-like
Location	Chr4: 22931821 .. 22932291 (-)
RNA-Seq Expression	CSPI04G25580
Synteny	CSPI04G25580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTCAGAATCATGGGCATAGACTCACCCATCTTCTCCACCCTCCAGCACGTGATGGACCTCGCCGATGAGGCCGACAAGTCCTTCAGCACACCTACCAGGGCTTACGTTCGGGACGCCAAGGCTATGGCAGCCACTCCAGCCGACGTCAAGGAGTATCCGAATTCCTATGTTTTCGTCGTTGACATGCCGGGATTAAAGGTCGGAGACATTCAGGTTCAGGTTGAGGATGACAATGTGCTACTCATAAGTGGGGAGAGGAAGAGGGAGGAGGAGAAAGAAGAAGCCAAGTATGTGAGGATGGAGAGGAGAGTTGGGAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCTAACACTGATGCCATATCGGCGGTTTGTCAGGATGGTGTGCTCACTGTGACTGTGCAAAAGTTGCCACCACCTCAGCCTAAGAAGCCCAAGATCGTTGAGGTCAAGGTCAATTGA

mRNA sequence

ATGGATCTCAGAATCATGGGCATAGACTCACCCATCTTCTCCACCCTCCAGCACGTGATGGACCTCGCCGATGAGGCCGACAAGTCCTTCAGCACACCTACCAGGGCTTACGTTCGGGACGCCAAGGCTATGGCAGCCACTCCAGCCGACGTCAAGGAGTATCCGAATTCCTATGTTTTCGTCGTTGACATGCCGGGATTAAAGGTCGGAGACATTCAGGTTCAGGTTGAGGATGACAATGTGCTACTCATAAGTGGGGAGAGGAAGAGGGAGGAGGAGAAAGAAGAAGCCAAGTATGTGAGGATGGAGAGGAGAGTTGGGAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCTAACACTGATGCCATATCGGCGGTTTGTCAGGATGGTGTGCTCACTGTGACTGTGCAAAAGTTGCCACCACCTCAGCCTAAGAAGCCCAAGATCGTTGAGGTCAAGGTCAATTGA

Coding sequence (CDS)

ATGGATCTCAGAATCATGGGCATAGACTCACCCATCTTCTCCACCCTCCAGCACGTGATGGACCTCGCCGATGAGGCCGACAAGTCCTTCAGCACACCTACCAGGGCTTACGTTCGGGACGCCAAGGCTATGGCAGCCACTCCAGCCGACGTCAAGGAGTATCCGAATTCCTATGTTTTCGTCGTTGACATGCCGGGATTAAAGGTCGGAGACATTCAGGTTCAGGTTGAGGATGACAATGTGCTACTCATAAGTGGGGAGAGGAAGAGGGAGGAGGAGAAAGAAGAAGCCAAGTATGTGAGGATGGAGAGGAGAGTTGGGAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCTAACACTGATGCCATATCGGCGGTTTGTCAGGATGGTGTGCTCACTGTGACTGTGCAAAAGTTGCCACCACCTCAGCCTAAGAAGCCCAAGATCGTTGAGGTCAAGGTCAATTGA

Protein sequence

MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN*

Homology

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BLAST of CSPI04G25580 vs. ExPASy Swiss-Prot
Match: P05477 (17.9 kDa class II heat shock protein OS=Glycine max OX=3847 GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.8e-64
Identity = 121/158 (76.58%), Postives = 144/158 (91.14%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEA---DKSFSTPTRAYVRDAKAMAATPADVKEYPNS 60
           MD R+MG++SP+F TLQH+MD++++    +K+ + PT +YVRDAKAMAATPADVKEYPNS
Sbjct: 1   MDFRVMGLESPLFHTLQHMMDMSEDGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNS 60

Query: 61  YVFVVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPE 120
           YVF +DMPGLK GDI+VQVEDDN+LLI GERKR+EEKE AKY+RMERRVGKLMRKFVLPE
Sbjct: 61  YVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPE 120

Query: 121 NANTDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
           NANTDAISAVCQDGVL+VTVQKLPPP+PKKP+ ++VKV
Sbjct: 121 NANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQVKV 158

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BLAST of CSPI04G25580 vs. ExPASy Swiss-Prot
Match: O82013 (17.3 kDa class II heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 8.3e-63
Identity = 125/156 (80.13%), Postives = 140/156 (89.74%), Query Frame = 0


Query: 1   MDLRIMGID-SPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYV 60
           MDLR++GID +P+F TL H+M+ A E   S + P++ YVRDAKAMAATPADVKEYPNSYV
Sbjct: 1   MDLRLLGIDNTPLFHTLHHMMEAAGE--DSVNAPSKIYVRDAKAMAATPADVKEYPNSYV 60

Query: 61  FVVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENA 120
           FVVDMPGLK GDI+VQVE+DNVLLISGERKREEEKE AK++RMERRVGK MRKF LPENA
Sbjct: 61  FVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENA 120

Query: 121 NTDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
           NTDAISAVCQDGVLTVTVQKLPPP+PKKPK +EVKV
Sbjct: 121 NTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKV 154

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BLAST of CSPI04G25580 vs. ExPASy Swiss-Prot
Match: P19242 (17.1 kDa class II heat shock protein OS=Pisum sativum OX=3888 GN=HSP17.7 PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.3e-60
Identity = 115/151 (76.16%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 6   MGIDSPIFSTLQHVMDLADE-ADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVFVVDM 65
           M +DSP+F+TL H+MDL D+  +K+ + PTR YVRDAKAMAATPADVKE+PNSYVF+VDM
Sbjct: 1   MDLDSPLFNTLHHIMDLTDDTTEKNLNAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDM 60

Query: 66  PGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENANTDAI 125
           PG+K GDI+VQVED+NVLLISGERKREEEKE  KY++MERR+GKLMRKFVLPENAN +AI
Sbjct: 61  PGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAI 120

Query: 126 SAVCQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
           SA+ QDGVLTVTV KLPPP+PKKPK ++VKV
Sbjct: 121 SAISQDGVLTVTVNKLPPPEPKKPKTIQVKV 151

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BLAST of CSPI04G25580 vs. ExPASy Swiss-Prot
Match: Q01544 (17.2 kDa class II heat shock protein OS=Ipomoea nil OX=35883 GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.4e-56
Identity = 113/157 (71.97%), Postives = 133/157 (84.71%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLA-DEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYV 60
           MDLR+MG D P+F    H+MD A D+   + S P+R ++ DAKAMAATPADVKEYPNSYV
Sbjct: 1   MDLRLMGFDHPLF---HHIMDYAGDDKSSNSSAPSRTFMLDAKAMAATPADVKEYPNSYV 60

Query: 61  FVVDMPGLKVGDIQVQVEDDNVLLISGERKRE-EEKEEAKYVRMERRVGKLMRKFVLPEN 120
           F++DMPGLK GDI+VQV+ DNVL ISGERKRE EEKE AKYVRMERRVGKLMRKFVLPEN
Sbjct: 61  FIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPEN 120

Query: 121 ANTDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
           AN + I+AVCQDGVLTVTV+ +PPP+PKKP+ +EVK+
Sbjct: 121 ANKEKITAVCQDGVLTVTVENVPPPEPKKPRTIEVKI 154

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BLAST of CSPI04G25580 vs. ExPASy Swiss-Prot
Match: P46516 (17.9 kDa class II heat shock protein OS=Helianthus annuus OX=4232 GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.9e-52
Identity = 107/155 (69.03%), Postives = 130/155 (83.87%), Query Frame = 0


Query: 5   IMGIDSPIFSTLQHVMDLADE---ADKS-FSTPTRAYVRDAKAMAATPADVKEYPNSYVF 64
           +MG D P+   L ++++  D+    +KS  S P+RAYVRDA+AMAATPADVKE PNSYVF
Sbjct: 6   LMGFD-PLLRNLHYILEATDDNTTGNKSNNSGPSRAYVRDARAMAATPADVKECPNSYVF 65

Query: 65  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 124
           +VDMPGLK GDI+VQVE DNVL+ISG+R REEEKE  KYVRMERR+GK M+KF LPE+AN
Sbjct: 66  IVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDAN 125

Query: 125 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
           TD ISA+CQDGVLTVTV+KLPPP+PKKPK ++V+V
Sbjct: 126 TDKISAICQDGVLTVTVEKLPPPEPKKPKTIQVQV 159

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BLAST of CSPI04G25580 vs. ExPASy TrEMBL
Match: A0A0A0L061 (Cytosolic class II low molecular weight heat shock protein OS=Cucumis sativus OX=3659 GN=Csa_4G646340 PE=3 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.5e-78
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 157
           TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 156

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BLAST of CSPI04G25580 vs. ExPASy TrEMBL
Match: H6TB44 (HSP17.4 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.2e-75
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMG+DSPIFSTLQHVMDLADEADKSFS PTR YVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDI+VQVEDDNVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 157
           TDAISAVCQDGVLTVTVQKLPPP+PKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

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BLAST of CSPI04G25580 vs. ExPASy TrEMBL
Match: A0A5A7VFP7 (17.9 kDa class II heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001920 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 7.5e-75
Identity = 151/156 (96.79%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MD RIMG++SPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDFRIMGLESPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEK EAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEK-EAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 157
            DAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN
Sbjct: 121 IDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 155

[Close]

BLAST of CSPI04G25580 vs. ExPASy TrEMBL
Match: A0A1S3BU21 (17.9 kDa class II heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103493686 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 7.5e-75
Identity = 151/156 (96.79%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MD RIMG++SPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDFRIMGLESPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEK EAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEK-EAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 157
            DAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN
Sbjct: 121 IDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 155

[Close]

BLAST of CSPI04G25580 vs. ExPASy TrEMBL
Match: A0A6J1FMP1 (17.1 kDa class II heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111446600 PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.9e-73
Identity = 144/156 (92.31%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMG+DSPIFSTL HVMDL DEADKSF+ PTR YVRDAKAMAATPAD+KEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDI+VQVEDDNVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 157
            DAISAVCQDGVLTVTVQKLPPP+PKKPK+VEVKVN
Sbjct: 121 VDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 156

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BLAST of CSPI04G25580 vs. NCBI nr
Match: KAE8649916.1 (hypothetical protein Csa_012089 [Cucumis sativus])

HSP 1 Score: 302.0 bits (772), Expect = 3.0e-78
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 168 MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 227

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 228 VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 287

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 157
           TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN
Sbjct: 288 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 323

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BLAST of CSPI04G25580 vs. NCBI nr
Match: XP_004141334.1 (17.9 kDa class II heat shock protein [Cucumis sativus])

HSP 1 Score: 302.0 bits (772), Expect = 3.0e-78
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 157
           TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 156

[Close]

BLAST of CSPI04G25580 vs. NCBI nr
Match: ADU55791.1 (HSP17.4 [Citrullus lanatus])

HSP 1 Score: 292.4 bits (747), Expect = 2.4e-75
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMG+DSPIFSTLQHVMDLADEADKSFS PTR YVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDI+VQVEDDNVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 157
           TDAISAVCQDGVLTVTVQKLPPP+PKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

[Close]

BLAST of CSPI04G25580 vs. NCBI nr
Match: XP_008452767.2 (PREDICTED: 17.9 kDa class II heat shock protein-like [Cucumis melo] >KAA0064521.1 17.9 kDa class II heat shock protein-like [Cucumis melo var. makuwa] >TYK20069.1 17.9 kDa class II heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 289.7 bits (740), Expect = 1.6e-74
Identity = 151/156 (96.79%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MD RIMG++SPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDFRIMGLESPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEK EAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEK-EAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 157
            DAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN
Sbjct: 121 IDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 155

[Close]

BLAST of CSPI04G25580 vs. NCBI nr
Match: XP_038898182.1 (17.9 kDa class II heat shock protein-like [Benincasa hispida])

HSP 1 Score: 288.1 bits (736), Expect = 4.5e-74
Identity = 148/156 (94.87%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 1   MDLRIMGIDSPIFSTLQHVMDLADEADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRIMG+DSPIFSTLQHVMDLADEADKSFS PTR YVRDAKAMAATPADVKEY NSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYTNSYVF 60

Query: 61  VVDMPGLKVGDIQVQVEDDNVLLISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDI+VQVEDDNVLLISGERKREEEKE AKYVRMERRVGKLMRKFVLP+NAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPDNAN 120

Query: 121 TDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 157
           TDAISAVCQDGVLTVTVQKLPPP+PKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

[Close]

BLAST of CSPI04G25580 vs. TAIR 10
Match: AT5G12020.1 (17.6 kDa class II heat shock protein )

HSP 1 Score: 185.3 bits (469), Expect = 3.9e-47
Identity = 95/148 (64.19%), Postives = 123/148 (83.11%), Query Frame = 0


Query: 11  PIFSTLQHVMDLADE--ADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVFVVDMPGLK 70
           PI S L+ ++++ ++   +K+ + P+R Y+RDAKAMAATPADV E+PN+Y FVVDMPG+K
Sbjct: 7   PIISILEDMLEVPEDHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNAYAFVVDMPGIK 66

Query: 71  VGDIQVQVEDDNVLLISGERKRE-EEKEEAKYVRMERRVGKLMRKFVLPENANTDAISAV 130
             +I+VQVE+DNVL++SGER+RE +E E  KYVRMERR+GK MRKF LPENA+ D ISAV
Sbjct: 67  GDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAV 126

Query: 131 CQDGVLTVTVQKLPPPQPKKPKIVEVKV 156
           C DGVL VTVQKLPPP+PKKPK ++V+V
Sbjct: 127 CHDGVLKVTVQKLPPPEPKKPKTIQVQV 154

[Close]

BLAST of CSPI04G25580 vs. TAIR 10
Match: AT5G12030.1 (heat shock protein 17.6A )

HSP 1 Score: 177.2 bits (448), Expect = 1.0e-44
Identity = 88/147 (59.86%), Postives = 122/147 (82.99%), Query Frame = 0


Query: 11  PIFSTLQHVMDLADE-ADKSFSTPTRAYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKV 70
           PIFS L+ +++  +E  +K+ + P+RAY+RDAKAMAATPADV E+P++YVF VDMPG+K 
Sbjct: 9   PIFSILEDMLEAPEEQTEKTRNNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKG 68

Query: 71  GDIQVQVEDDNVLLISGERKRE-EEKEEAKYVRMERRVGKLMRKFVLPENANTDAISAVC 130
            +IQVQ+E++NVL++SG+R+R+ +E E  K+VRMERR+GK MRKF LP+NA+ + ISA C
Sbjct: 69  DEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAAC 128

Query: 131 QDGVLTVTVQKLPPPQPKKPKIVEVKV 156
            DGVL VT+ KLPPP+PKKPK ++V+V
Sbjct: 129 NDGVLKVTIPKLPPPEPKKPKTIQVQV 155

[Close]

BLAST of CSPI04G25580 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 102.4 bits (254), Expect = 3.3e-22
Identity = 58/134 (43.28%), Postives = 82/134 (61.19%), Query Frame = 0


Query: 28  KSFSTPTRAY-----VRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIQVQVEDDNVL 87
           + F TP+ A       RD  A      D KE P ++VF  D+PGLK  +++V+VED NVL
Sbjct: 28  EGFFTPSSALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVL 87

Query: 88  LISGERKREEEKEEAKYVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQKLPP 147
            ISGER +E E++  K+ R+ER  GK MR+F LPENA  + + A  ++GVLTV V K P 
Sbjct: 88  QISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAP- 147

Query: 148 PQPKKPKIVEVKVN 157
              KKP++  + ++
Sbjct: 148 --EKKPQVKSIDIS 158

[Close]

BLAST of CSPI04G25580 vs. TAIR 10
Match: AT1G54050.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 2.1e-21
Identity = 53/114 (46.49%), Postives = 85/114 (74.56%), Query Frame = 0


Query: 48  PADVKEYPNSYVFVVDMPGLKVGDIQVQVEDDNVLLI--SGERKREEEKEE--AKYVRME 107
           P D+ E P  Y+F +D+PG+   DIQV VE++  L+I  +G+RKR++++ E  +KY+R+E
Sbjct: 43  PIDILESPKEYIFYLDIPGISKSDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIRLE 102

Query: 108 RRVGK-LMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVKVN 157
           RR+ + L++KF LPE+A+  +++A  Q+GVLTV ++KL PPQP KPK V++ V+
Sbjct: 103 RRLAQNLVKKFRLPEDADMASVTAKYQEGVLTVVIKKL-PPQPPKPKTVQIAVS 155

[Close]

BLAST of CSPI04G25580 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 97.1 bits (240), Expect = 1.4e-20
Identity = 55/131 (41.98%), Postives = 81/131 (61.83%), Query Frame = 0


Query: 28  KSFSTP--TRAYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIQVQVEDDNVLLIS 87
           + F TP  T A  +D  A      D +E P ++VF  D+PGLK  +++V+VED N+L IS
Sbjct: 28  EGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQIS 87

Query: 88  GERKREEEKEEAKYVRMERRVGKLMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQP 147
           GER  E E++   + R+ER  GK MR+F LPENA  + + A  ++GVL+VTV K+   Q 
Sbjct: 88  GERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKV---QE 147

Query: 148 KKPKIVEVKVN 157
            KP++  V ++
Sbjct: 148 SKPEVKSVDIS 155

The following BLAST results are available for this feature:

BLAST of CSPI04G25580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P05477	5.8e-64	76.58	17.9 kDa class II heat shock protein OS=Glycine max OX=3847 GN=HSP17.9-D PE=3 SV...	[more]
O82013	8.3e-63	80.13	17.3 kDa class II heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1	[more]
P19242	2.3e-60	76.16	17.1 kDa class II heat shock protein OS=Pisum sativum OX=3888 GN=HSP17.7 PE=1 SV...	[more]
Q01544	3.4e-56	71.97	17.2 kDa class II heat shock protein OS=Ipomoea nil OX=35883 GN=SHSP-1 PE=2 SV=1	[more]
P46516	3.9e-52	69.03	17.9 kDa class II heat shock protein OS=Helianthus annuus OX=4232 GN=HSP17.9 PE=...	[more]

BLAST of CSPI04G25580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L061	1.5e-78	100.00	Cytosolic class II low molecular weight heat shock protein OS=Cucumis sativus OX...	[more]
H6TB44	1.2e-75	96.15	HSP17.4 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A5A7VFP7	7.5e-75	96.79	17.9 kDa class II heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3BU21	7.5e-75	96.79	17.9 kDa class II heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC10349368...	[more]
A0A6J1FMP1	1.9e-73	92.31	17.1 kDa class II heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of CSPI04G25580 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649916.1	3.0e-78	100.00	hypothetical protein Csa_012089 [Cucumis sativus]	[more]
XP_004141334.1	3.0e-78	100.00	17.9 kDa class II heat shock protein [Cucumis sativus]	[more]
ADU55791.1	2.4e-75	96.15	HSP17.4 [Citrullus lanatus]	[more]
XP_008452767.2	1.6e-74	96.79	PREDICTED: 17.9 kDa class II heat shock protein-like [Cucumis melo] >KAA0064521....	[more]
XP_038898182.1	4.5e-74	94.87	17.9 kDa class II heat shock protein-like [Benincasa hispida]	[more]

BLAST of CSPI04G25580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12020.1	3.9e-47	64.19	17.6 kDa class II heat shock protein	[more]
AT5G12030.1	1.0e-44	59.86	heat shock protein 17.6A	[more]
AT5G59720.1	3.3e-22	43.28	heat shock protein 18.2	[more]
AT1G54050.1	2.1e-21	46.49	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	1.4e-20	41.98	heat shock protein 17.4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 92..112
None	No IPR available	PANTHER	PTHR11527:SF260	18.0 KDA CLASS II HEAT SHOCK PROTEIN	coord: 8..155
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 8..153 e-value: 9.4E-40 score: 137.7
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 15..150
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 50..153 e-value: 5.6E-29 score: 100.3
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 40..156 score: 28.635773
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 8..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G25580.1	CSPI04G25580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding