CSPI04G22510 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCATATTCAATCCGCTTTACAATGGGTGATCAAGGTTCAGCTTTGCGTGGAAGCACAGACAGGCAATGACTCTAGGCACAGGCTGAAGACCTTGAAAGAGTCCCTTCATGAAACTTCTCAAGGTCAGAGTGTGATGTCTGACTTGAACAGATATTTAGAAGGATCAGTGTTTCCTCGAAAATTCGATTTCAACTTAAACAAACATATTAAATTGATGAAAGGTCTACATGCAGAGGTAACCAATCTTGTCCATGATGGCTCGTGA ATGATGCATATTCAATCCGCTTTACAATGGGTGATCAAGGTTCAGCTTTGCGTGGAAGCACAGACAGGCAATGACTCTAGGCACAGGCTGAAGACCTTGAAAGAGTCCCTTCATGAAACTTCTCAAGGTCAGAGTGTGATGTCTGACTTGAACAGATATTTAGAAGGATCAGTGTTTCCTCGAAAATTCGATTTCAACTTAAACAAACATATTAAATTGATGAAAGGTCTACATGCAGAGGTAACCAATCTTGTCCATGATGGCTCGTGA ATGATGCATATTCAATCCGCTTTACAATGGGTGATCAAGGTTCAGCTTTGCGTGGAAGCACAGACAGGCAATGACTCTAGGCACAGGCTGAAGACCTTGAAAGAGTCCCTTCATGAAACTTCTCAAGGTCAGAGTGTGATGTCTGACTTGAACAGATATTTAGAAGGATCAGTGTTTCCTCGAAAATTCGATTTCAACTTAAACAAACATATTAAATTGATGAAAGGTCTACATGCAGAGGTAACCAATCTTGTCCATGATGGCTCGTGA MMHIQSALQWVIKVQLCVEAQTGNDSRHRLKTLKESLHETSQGQSVMSDLNRYLEGSVFPRKFDFNLNKHIKLMKGLHAEVTNLVHDGS* Homology
BLAST of CSPI04G22510 vs. ExPASy TrEMBL
Match: A0A6J1IN11 (zinc finger BED domain-containing protein RICESLEEPER 1-like OS=Cucurbita maxima OX=3661 GN=LOC111477023 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.3e-07 Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = 0
BLAST of CSPI04G22510 vs. ExPASy TrEMBL
Match: A0A6J1FC74 (zinc finger BED domain-containing protein RICESLEEPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111442712 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.3e-07 Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = 0
BLAST of CSPI04G22510 vs. ExPASy TrEMBL
Match: A0A0A0L1Z7 (BED-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G624400 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 3.0e-07 Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = 0
BLAST of CSPI04G22510 vs. ExPASy TrEMBL
Match: A0A1S4E4C0 (zinc finger BED domain-containing protein RICESLEEPER 1-like OS=Cucumis melo OX=3656 GN=LOC107992032 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.9e-07 Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 0
BLAST of CSPI04G22510 vs. ExPASy TrEMBL
Match: A0A5A7VEC8 (Zinc finger BED domain-containing protein RICESLEEPER 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00500 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.9e-07 Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 0
BLAST of CSPI04G22510 vs. NCBI nr
Match: KAG7024652.1 (Zinc finger BED domain-containing protein RICESLEEPER 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 64.7 bits (156), Expect = 4.7e-07 Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = 0
BLAST of CSPI04G22510 vs. NCBI nr
Match: KAG6591773.1 (Zinc finger BED domain-containing protein RICESLEEPER 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 64.7 bits (156), Expect = 4.7e-07 Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = 0
BLAST of CSPI04G22510 vs. NCBI nr
Match: XP_022935970.1 (zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucurbita moschata]) HSP 1 Score: 64.7 bits (156), Expect = 4.7e-07 Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = 0
BLAST of CSPI04G22510 vs. NCBI nr
Match: XP_022976722.1 (zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucurbita maxima] >XP_022976723.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucurbita maxima]) HSP 1 Score: 64.7 bits (156), Expect = 4.7e-07 Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = 0
BLAST of CSPI04G22510 vs. NCBI nr
Match: XP_011654029.1 (zinc finger BED domain-containing protein RICESLEEPER 1 [Cucumis sativus] >XP_031739904.1 zinc finger BED domain-containing protein RICESLEEPER 1 [Cucumis sativus] >XP_031739905.1 zinc finger BED domain-containing protein RICESLEEPER 1 [Cucumis sativus] >KGN55554.2 hypothetical protein Csa_012163 [Cucumis sativus]) HSP 1 Score: 64.3 bits (155), Expect = 6.1e-07 Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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