CSPI04G19410 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G19410
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTranslation factor GUF1 homolog, chloroplastic
LocationChr4: 17188164 .. 17194451 (-)
RNA-Seq ExpressionCSPI04G19410
SyntenyCSPI04G19410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGGCAGCTCGAATGCGCTACATGTATAAGAATGAAGCATACTGCTTGAATTTGATTGATACACCTGGCCATGTTGACTTCTCTTATGAGGTAATTTCGTGCAAGCCTTTTGATTTCTGCAACGCTTATATTTTATAATTGCATTTGATGGCTATCTTGCAATATAATGTACCAAATGATAAAGCTGATCCAAACAGTTACCATAAAACTTCAGCATTCTGGGTTGGAAAAGAAGAAGAATTGGTGGACTTGCATATACAACAATTTAATAAATTAATTCTGAAAGTAGCTAAAATGTAGGCCTAACGCTCTAAGTAGTGGACAAAAAGGGCCAACATACGATTAGAAAAAGGAGAGACCTTGTTCACCAAAGACAAGTAATCACTCTAGTAATGTGCTAAGCCTCCAATTGAGAATTGATATGTAAGAATGGGTAATAAAGGAAAATGCCACTGTGGACACATATCTGATGGAGGAAGGTGGGTGATCTAACCGGTGACATGGAGTGAAGTGGGAGATCTACACTGGGTCTGCCTCCGCTAACGATCGTTCGATGGAGGCAAAGATCAAATATGACTATGACGACTAGGGTTCAATTGAGACAAAAAACCTAATGCTCTGATACGATGATAATTTTATATAATGTATTGAATATTCAGAACGATCACCTTTTACATTGGTAAATAAATAGAAACCAAAATACTAATAAAGGAAAAGTACATAAATGTAAAATAATAATTAGGAATAAACCTAATTTAGTAATAAGCCCTAATTTTCTTTTGCAGAAATTGGAGGCAAATAAATATCAATTTCCTTTTTCGTTTATTGAATATATGCAAATTAGGTCTTCTAATATAGAAGAAAGACCTTACAAATATGGAAAGAATAAAAATAAAAAAGAACAAATATTTGAAAAATAATATCCATATACAAATAAAGAAATTCGAACTCTCCCTCAAGCTGGATGTGTTTTAGGTGATCTTCCCTAGATGAGCTATACATGAGTATGTCATCAAAGTATACCACAATGAATTGATTAAAAAAAGGTTGTAGGATTTGGTTCATCAAACTCATAAAGGTGCTAGGGGCATTAGAAAGACCAAAGGGCATAACTAACCATTCAAACAACTCTTCATTGGTTTTAAAGGCTGTTTTCCACTCATCCCCTGGGTTAATTCTAATTTGGTGGGAGCCACTCTTAAGATCTACTTTGGAAAAGATGGAAGCTTTACCTAATTGATCAAGGAGGTCGGATAAACGAGGTGTGGGAAACCTATATTTGACTGTAATTTTGTTTATAAATCTACTATCTACACAAAGTCTTCAGTTGCCATCTTTTTTTGGTGCAAGTAGAGCTGGGACAGCACAAAGACTTAGGCTAGGTTGGATATGACCTTTGTTAAGAAGCTCTTCTATTTGTTCATGTAATATTTTGTACTCTCTAGGGTTCATTCGATAATGTGGCAGATTTGTTAATTCTACTAATGATTGCTGTATATCCGACTGCCCTTTTCGAAGTTCTTCAACAGCTTGTTCTACCAACTGCAAGCGTTGGTTGAAGGAGGCTTCCACGTCCATGGATAAGAGTGGTAGGATCCAAGTTTTTTGAGGGAAGGGTGAGCTAGGATCACGCTCTGATACCAAATGATGCAGTAATTGCAAAGCTAGAAATCTTTATGTATAATGCCTCTTTTTTGATGATCTATTAATGAAAATGAGAAGCCTTTTTATACGCGGGAGATTACAAGAGTTATTAAACTAACTTGGGGTTGAGTTAGTTTAACTTGGAATTGAGTTAGTTTATTTATAACTAACTCAAGATACAAAATTGGTAATTCAAATAACTAATCCTAAACTATAAAAATGGTAATTCAAACCCCTCCTCTAGGACAAAACTCAAGAAACATCAAGAATAGAGGACAAAACTCAAGAAACATCAAGAAGGGAGATGTTCTACATCAGGTTCCTTCTCGGTAAAATCATTGGTTAAGTATCTCATGACTTCTTCTCCTTTAGAAAGTTCTTTGTACAAAAGGCTTTGGCAATCTAATAGTCCAAGAATGGTAAAATATCTCCACATGGATTATGCTGTTTGGAAAATTAAATTGTGCTTCAGTACTTCAAAGTAAGCTTCCCTCTCATGTTCTCTCACCTCATGCCTGCCCCCTTTGTGTTGGTAACATGGAAAATATTAAGCACCTTTTATTTGACTGTATCTTTGCATCTAAATGTTGGTTCCGTCTTCTCCAAGCATTCAATATTTGTTAGGCCTTTGATCATGAATTATTCTGCGGTAGAGCTTTTAACAAATTTTCCCATATTATATGAGATTTCTTGGGTAAAATTGGACCCAACAGCAGCTGAGCAACATTAGCGTTTAGTGATCGATCCAATACCCAATCAAAATTGAACAAGTAGAAAATCCTCACCCAGCAGAAGGAAGGACGGGGCAATTAAAAAAATATGAGGAAGATTCTCACAAGCCTTCATACATAGAGGACAAATCGAAGAAGAGAGGCATTTGTTTGGGGATTTCTTTTGCAAAATTTCTGAACTGTTGAGCTAAGAATCACATACACTTTAATTTGGATAGCATGTTCGTGTCCGACACGTGTTGGACAATCTGGAACTGGCTGAACACCTATTGGACGCTTGCTAGTGCAACAAATGTATTAGACATGCATAGAACACTCATTGAGTAGACTAAAAAAGACACGTATATGACAATAATATTAACTTTTGAGCATGGAATACATCAAGCCAAGTCTTTTAAGTATATAAATGCATCAATTCATTTACTATAAAAATGATATATATATTTTAAAAATGAATATTTTAATAAACGTATCCTTGCCTTGTCGTGTTCTAAATTTTTGAAATATAGTGTGTCACTGTGTCCGTGTCGTGTTGTATTCGTGTCTCGTATCTGTGTCCATGCTTCTTAGTTGTTGAGGGACCTGAAGACCATAATCCAAATCAAGATGTTAATTCTCTGTGGGCTGCCTGATTTTAATTCATCGGGGAGGCAGTTTTTAGGTGAGCCGAAAGAGACTTAATGAAAAACCGGCCATGGGGATCAATGGACCAAGATCTATAATCGTTGGATTTATTCACTTTCTTAGTTGAGAGGAGGGATGTAATGATTGAAATTCTCAATTTCATCATCTTTCAAACATCTTCTAAAGGCCAATGACCAAGATGAAATATCACAGTCCCAACGTGCTGCAACTGAACCGGTGGGCAAAAGAGCAATTCTAAAGAGCTTGGAAAATTGCTCCTTAATAAGGGCCTTACCAACCCAAGGATCTGTCCAAAAATCGATTCTACGACCGTTACCAAGTTTAAGTGAGGCTAATGAGTCTACCGACCTCCAAACTCCAGCAATGTTTACCCAAGGACTCCTTAGATTGTTTCTGGACTTTCCTTTAGTAAACCAATCAAAAACCTCCTTTTCGTGTATGCTTCTAATTATTTGTCTCCATAGAGCTGACTCTTCTTTTGAGAATCTCCACCTCCACTTAGCGAGCAAAGCAGTGTTATGGACTTTAATTCCTCCTAGGCCGAGACCCCCATCTTTTAGAGGTGGGTGAGACCTTGTTCAACTTCACAAGGTGGTTAATTTTGCTACCGGCGTAGCCTTCCCAAAAGAAGTTTTGCATGATTCTCTTTAAAGAGGCAGGCACATTTTCAGGTATTGAAAATAAAGATAGGTAATAGGTGGGAAGATTAACCAGCAATGAGTTATAAAAGGTGTGCTACCTCCTTTGAGATGGTATATCTTTTCCACCTATCTAGTTTCTTGTGAATTCGATCAATAACTGGCCGCCAAAATTCCTTTTGTCAAGGGTAGCCTCCCAAAGGGAAACCTAAATATTGAAGCGGTAACTTTTCTGCCTTGCAGCATAGCCGATTTTCTGTTTGAATCAAATCTTCCTCTCCCACATTAACACCACTAAGGGCTGATTTCTCTAAATTTTCTTTCTGCCTTGAATACCATTCGAATAGCCTAATGGCATCCTTAAGCTTTAGTAGCTTTTCTCATCATACTTACAGAATAGGAGAGTGTCACAGGCGAATTGGAGCGATGGGAGGTGGATCATGTCCTTGCCAACGAGAAAACCGTCAAACTGACCATTAATATGAAGTTTGTTATGATTTCTCCTAGAACCTCACTTTCTAAGAGAAATAAAAAGGGGGAAGGGGGTCCCCTTGGTGGATACCTTAAGAGGCTGTTATTCGATCTCTTGGCTTACCATTAATGAGAACTGAGAATTTTGGACTTCTTAGGCAGCCCATTATCCATGAAGTCCATGTGGAGCTAAACTTTTCAAATGATAAAACCTTTTCTAAAAAGTTCCAATCCACCCTATCAAAGCTTTTTCAAGATCGAGTCTTAAAATCCAGCCCTATCAATTACAGGATTTTATTCGCCTCCAATCTTCAACTTGGAATAAATCATGCTCGTGCCATATGTAGTAGGGAGAGCCAAAAACCTTGCAACTTTCTACTTCCATTTCGTGCTTTCTTGCTCGAGAAACAAATATCTGAAAATGTCGGAGGGGGAAGGCCGAGGGAGAAAGAGAAAAAGTGAGAGGAGAGAGGATAGAGGAGAGAACTTACCTTATAAAATAAAAATAATACCAATCCACTCTATCTTGGTCTATTGTTTTTAGAAGACCACTTAAAGAAGATGAAATCATAGAGTTTCAGCAATTGCTTCAACTTTTTTCGCAAAGGCGACTGGCAGAATCTCTAGATAGAAGGCTTTGGTCTTTAGAATCATCCGATAAGTTTTCAGTCAAATCTCTTGTGGCTCACCTTTCACCCTCATCTCTGATGAATTGAGAGACTTACATACCCTTATGGAAATCCAACAGCCCTAGTAGAGTTAATATTTTTGTATGGATTATGTTGTTTGAATTATTAAACTGTTCATTGGTCATGCGAAGGAGGCTTCCAAACAGTTGCCTCTTGCCCTCAGTATGCCTTCTTTGCCTTCAAGAAGAGCAAGATTTGCAACACTTGTTCTTCTCCTGCTCATATTCAGCTAAGTGTTGGGGCAGTTTGCTCTCTTTATTCGAAGTTGATTGGGTTTTTGATGGCACATTCAGCTTTAATGTAGTTAGATTATGATGAGTCCTTTCATAAAAAAGGGGCCAAGATTACTATGGATTAACTTGTCCAAAGCACCGCTCGCGAAAATATGGTTTGAACGTAACCAAAGGATATTCCATAATATATGAGTTGGTCAGAACAAATGGGCATTGCAAAAAGAAATGCAGCTGCTTGATGCGCTCAGAACAAGGAGTTTAGCGCATACTCTATTCAATATTTGTGTTTGAATTGGTCGGCTTTCACCTCTTAAGTTCGCTAGAATTGTGTGATTTGATCATACAATGCACTCTACCTTATTTTGAGGTACTCTTTTATTAAAATTTCTACTTTTACTAGTATTGTATGGACATGATGGACGCTAGTGCCTAGGGGGGTGTCAACCTAGTTGAGATGTCTGGGTGCGTCACCTAATCTCTAGGTCTCACTCATATATCTCATGTATGCTATTGGGTCTTAATTTTGAAACTTTTCGTAATTATTCTATTGGCGTTTTTTGTATAGTTTGAGTCTCTTCTAAGTTGAGATTCCCTCCTTTTATCGTGGGATTGCCTTTTTGTATGTCCTTGTATTCTTTCAATTTTTCTCCATGAATGTTTATAGAGAAAAATAGCCATAATATTTCAACTTCCCCTTTTTTGCTAGGTTTCTCGATCTCTTGCTGCCTGTGAGGGTGCTCTCCTTGTTGTAGATGCTTCACAGGTAAATCATTCTTGAGAATACTTTGTGTTTGCATAGTTTATTATTTCTCTTCCAATTTGCTACCCATGTCTGGAATCTATATGCATTGATTGTGTGCAATTTGGCCATAGCAATGTTTCTATGAACCTTCTAGTTTTTGTTATAGTTAAACCTATATTATCTTTTGTTATGTTTAACTCCTATTCAAATATGTATTCTTGATAATACTTTGTGTTTGCATAGTTTATTATTTCTCTTCCAATTTGCTACCCATGTCTGGAATCTATATGCATTAATTGTGTGCAATTTGGCCATAGCAATGTTTCTATGAACCTTCTAGTTTTTGTTATAGTTGAACCTATATTATCTTTTGTTATGTTTAACTCCTATTCAAATATGTATTAGGGCGTGGAGGCACAAACGTTGGCAAATGTCTATTTGGCTCTTGATAATAACTTAGAAATTATCCCCGTAAGTTTCATCATTATACTGCTC

mRNA sequence

CAGGCAGCTCGAATGCGCTACATGTATAAGAATGAAGCATACTGCTTGAATTTGATTGATACACCTGGCCATGTTGACTTCTCTTATGAGGTTTCTCGATCTCTTGCTGCCTGTGAGGGTGCTCTCCTTGTTGTAGATGCTTCACAGGGCGTGGAGGCACAAACGTTGGCAAATGTCTATTTGGCTCTTGATAATAACTTAGAAATTATCCCCGTAAGTTTCATCATTATACTGCTC

Coding sequence (CDS)

CAGGCAGCTCGAATGCGCTACATGTATAAGAATGAAGCATACTGCTTGAATTTGATTGATACACCTGGCCATGTTGACTTCTCTTATGAGGTTTCTCGATCTCTTGCTGCCTGTGAGGGTGCTCTCCTTGTTGTAGATGCTTCACAGGGCGTGGAGGCACAAACGTTGGCAAATGTCTATTTGGCTCTTGATAATAACTTAGAAATTATCCCCGTAAGTTTCATCATTATACTGCTC

Protein sequence

QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPVSFIIILL
Homology
[Close]
BLAST of CSPI04G19410 vs. ExPASy Swiss-Prot
Match: B9GHA6 (Translation factor GUF1 homolog, chloroplastic OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_815670 PE=3 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 5.0e-32
Identity = 68/72 (94.44%), Postives = 71/72 (98.61%), Query Frame = 0 

Query: 1   QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 60
           QAARMRY+Y+NE YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY
Sbjct: 136 QAARMRYVYENEGYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 195

Query: 61  LALDNNLEIIPV 73
           LAL+NNLEIIPV
Sbjct: 196 LALENNLEIIPV 207

[Close]
BLAST of CSPI04G19410 vs. ExPASy Swiss-Prot
Match: B9RHQ5 (Translation factor GUF1 homolog, chloroplastic OS=Ricinus communis OX=3988 GN=RCOM_1767360 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.9e-31
Identity = 67/72 (93.06%), Postives = 71/72 (98.61%), Query Frame = 0 

Query: 1   QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 60
           QAARMRY+Y+N+ YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY
Sbjct: 141 QAARMRYVYENKPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 200

Query: 61  LALDNNLEIIPV 73
           LAL+NNLEIIPV
Sbjct: 201 LALENNLEIIPV 212

[Close]
BLAST of CSPI04G19410 vs. ExPASy Swiss-Prot
Match: A5B4D2 (Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera OX=29760 GN=VITISV_013255 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.9e-31
Identity = 67/72 (93.06%), Postives = 71/72 (98.61%), Query Frame = 0 

Query: 1   QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 60
           QAARMRY+++NE YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY
Sbjct: 138 QAARMRYVFENEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 197

Query: 61  LALDNNLEIIPV 73
           LAL+NNLEIIPV
Sbjct: 198 LALENNLEIIPV 209

[Close]
BLAST of CSPI04G19410 vs. ExPASy Swiss-Prot
Match: Q9FNM5 (Translation factor GUF1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g08650 PE=1 SV=2)

HSP 1 Score: 131.7 bits (330), Expect = 3.6e-30
Identity = 65/72 (90.28%), Postives = 70/72 (97.22%), Query Frame = 0 

Query: 1   QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 60
           QAARMRY+Y++  +CLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY
Sbjct: 139 QAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 198

Query: 61  LALDNNLEIIPV 73
           LAL+NNLEIIPV
Sbjct: 199 LALENNLEIIPV 210

[Close]
BLAST of CSPI04G19410 vs. ExPASy Swiss-Prot
Match: B8AI54 (Translation factor GUF1 homolog, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_05919 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.0e-29
Identity = 65/72 (90.28%), Postives = 69/72 (95.83%), Query Frame = 0 

Query: 1   QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 60
           QAARMRY+  +E YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY
Sbjct: 86  QAARMRYIMNDEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 145

Query: 61  LALDNNLEIIPV 73
           LAL+N+LEIIPV
Sbjct: 146 LALENDLEIIPV 157

[Close]
BLAST of CSPI04G19410 vs. ExPASy TrEMBL
Match: A0A1S3BMN9 (Translation factor GUF1 homolog, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491317 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.6e-31
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1   QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 60
           QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY
Sbjct: 140 QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 199

Query: 61  LALDNNLEIIPV 73
           LALDNNLEIIPV
Sbjct: 200 LALDNNLEIIPV 211

[Close]
BLAST of CSPI04G19410 vs. ExPASy TrEMBL
Match: A0A0A0L295 (Tr-type G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G437520 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 5.7e-31
Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1   QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 60
           QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY
Sbjct: 140 QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 199

Query: 61  LALDNNLEIIPV 73
           LALDNNLEIIP+
Sbjct: 200 LALDNNLEIIPL 211

[Close]
BLAST of CSPI04G19410 vs. ExPASy TrEMBL
Match: A0A6J1HRW4 (Translation factor GUF1 homolog, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466184 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 7.5e-31
Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1   QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 60
           QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY
Sbjct: 143 QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 202

Query: 61  LALDNNLEIIPV 73
           LAL+NNLEIIPV
Sbjct: 203 LALENNLEIIPV 214

[Close]
BLAST of CSPI04G19410 vs. ExPASy TrEMBL
Match: A0A6J1DVN5 (Translation factor GUF1 homolog, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111024873 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 7.5e-31
Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1   QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 60
           QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY
Sbjct: 141 QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 200

Query: 61  LALDNNLEIIPV 73
           LAL+NNLEIIPV
Sbjct: 201 LALENNLEIIPV 212

[Close]
BLAST of CSPI04G19410 vs. ExPASy TrEMBL
Match: A0A2P5BIW9 (Translation factor GUF1 homolog, chloroplastic OS=Parasponia andersonii OX=3476 GN=PanWU01x14_234400 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.2e-30
Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1   QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 60
           QAARMRYM+KNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY
Sbjct: 143 QAARMRYMFKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 202

Query: 61  LALDNNLEIIPV 73
           LAL+NNLEIIPV
Sbjct: 203 LALENNLEIIPV 214

[Close]
BLAST of CSPI04G19410 vs. NCBI nr
Match: XP_031740278.1 (translation factor GUF1 homolog, chloroplastic isoform X4 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 5.3e-31
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1   QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 60
           QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY
Sbjct: 140 QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 199

Query: 61  LALDNNLEIIPV 73
           LALDNNLEIIPV
Sbjct: 200 LALDNNLEIIPV 211

[Close]
BLAST of CSPI04G19410 vs. NCBI nr
Match: XP_031740276.1 (translation factor GUF1 homolog, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 5.3e-31
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1   QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 60
           QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY
Sbjct: 140 QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 199

Query: 61  LALDNNLEIIPV 73
           LALDNNLEIIPV
Sbjct: 200 LALDNNLEIIPV 211

[Close]
BLAST of CSPI04G19410 vs. NCBI nr
Match: XP_008449438.1 (PREDICTED: translation factor GUF1 homolog, chloroplastic [Cucumis melo])

HSP 1 Score: 144.1 bits (362), Expect = 5.3e-31
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1   QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 60
           QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY
Sbjct: 140 QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 199

Query: 61  LALDNNLEIIPV 73
           LALDNNLEIIPV
Sbjct: 200 LALDNNLEIIPV 211

[Close]
BLAST of CSPI04G19410 vs. NCBI nr
Match: XP_031740277.1 (translation factor GUF1 homolog, chloroplastic isoform X3 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 5.3e-31
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1   QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 60
           QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY
Sbjct: 140 QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 199

Query: 61  LALDNNLEIIPV 73
           LALDNNLEIIPV
Sbjct: 200 LALDNNLEIIPV 211

[Close]
BLAST of CSPI04G19410 vs. NCBI nr
Match: XP_011653860.1 (translation factor GUF1 homolog, chloroplastic isoform X1 [Cucumis sativus] >KGN54948.2 hypothetical protein Csa_012600 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 5.3e-31
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1   QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 60
           QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY
Sbjct: 140 QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 199

Query: 61  LALDNNLEIIPV 73
           LALDNNLEIIPV
Sbjct: 200 LALDNNLEIIPV 211

[Close]
BLAST of CSPI04G19410 vs. TAIR 10
Match: AT5G08650.1 (Small GTP-binding protein )

HSP 1 Score: 131.7 bits (330), Expect = 2.5e-31
Identity = 65/72 (90.28%), Postives = 70/72 (97.22%), Query Frame = 0 

Query: 1   QAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 60
           QAARMRY+Y++  +CLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY
Sbjct: 139 QAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVY 198

Query: 61  LALDNNLEIIPV 73
           LAL+NNLEIIPV
Sbjct: 199 LALENNLEIIPV 210

[Close]
BLAST of CSPI04G19410 vs. TAIR 10
Match: AT5G39900.1 (Small GTP-binding protein )

HSP 1 Score: 99.4 bits (246), Expect = 1.4e-21
Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 0 

Query: 1   QAARMRYMYKNE-----AYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQT 60
           Q A M Y  K E      Y LNLIDTPGHVDFSYEVSRSL+AC+GALLVVDA+QGV+AQT
Sbjct: 119 QTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQGVQAQT 178

Query: 61  LANVYLALDNNLEIIPV 73
           +AN YLA + NL I+PV
Sbjct: 179 VANFYLAFEANLTIVPV 195

[Close]
BLAST of CSPI04G19410 vs. TAIR 10
Match: AT1G06220.2 (Ribosomal protein S5/Elongation factor G/III/V family protein )

HSP 1 Score: 56.2 bits (134), Expect = 1.4e-08
Identity = 26/63 (41.27%), Postives = 45/63 (71.43%), Query Frame = 0 

Query: 10  KNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEI 69
           ++++Y  N++DTPGHV+FS E++ SL   +GA+L+VDA++GV   T   +  A+ ++L I
Sbjct: 205 RSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAIQDHLPI 264

Query: 70  IPV 73
           + V
Sbjct: 265 VVV 267

[Close]
BLAST of CSPI04G19410 vs. TAIR 10
Match: AT1G06220.1 (Ribosomal protein S5/Elongation factor G/III/V family protein )

HSP 1 Score: 56.2 bits (134), Expect = 1.4e-08
Identity = 26/63 (41.27%), Postives = 45/63 (71.43%), Query Frame = 0 

Query: 10  KNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEI 69
           ++++Y  N++DTPGHV+FS E++ SL   +GA+L+VDA++GV   T   +  A+ ++L I
Sbjct: 205 RSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAIQDHLPI 264

Query: 70  IPV 73
           + V
Sbjct: 265 VVV 267

[Close]
BLAST of CSPI04G19410 vs. TAIR 10
Match: AT1G56070.1 (Ribosomal protein S5/Elongation factor G/III/V family protein )

HSP 1 Score: 53.1 bits (126), Expect = 1.2e-07
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 0 

Query: 14  YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQT 56
           Y +NLID+PGHVDFS EV+ +L   +GAL+VVD  +GV  QT
Sbjct: 98  YLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQT 139

The following BLAST results are available for this feature:
BLAST of CSPI04G19410 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B9GHA65.0e-3294.44Translation factor GUF1 homolog, chloroplastic OS=Populus trichocarpa OX=3694 GN... [more]
B9RHQ51.9e-3193.06Translation factor GUF1 homolog, chloroplastic OS=Ricinus communis OX=3988 GN=RC... [more]
A5B4D21.9e-3193.06Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera OX=29760 GN=VIT... [more]
Q9FNM53.6e-3090.28Translation factor GUF1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 G... [more]
B8AI541.0e-2990.28Translation factor GUF1 homolog, chloroplastic OS=Oryza sativa subsp. indica OX=... [more]
BLAST of CSPI04G19410 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BMN92.6e-31100.00Translation factor GUF1 homolog, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103... [more]
A0A0A0L2955.7e-3198.61Tr-type G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G437520 P... [more]
A0A6J1HRW47.5e-3198.61Translation factor GUF1 homolog, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1DVN57.5e-3198.61Translation factor GUF1 homolog, chloroplastic OS=Momordica charantia OX=3673 GN... [more]
A0A2P5BIW92.2e-3097.22Translation factor GUF1 homolog, chloroplastic OS=Parasponia andersonii OX=3476 ... [more]
BLAST of CSPI04G19410 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031740278.15.3e-31100.00translation factor GUF1 homolog, chloroplastic isoform X4 [Cucumis sativus][more]
XP_031740276.15.3e-31100.00translation factor GUF1 homolog, chloroplastic isoform X2 [Cucumis sativus][more]
XP_008449438.15.3e-31100.00PREDICTED: translation factor GUF1 homolog, chloroplastic [Cucumis melo][more]
XP_031740277.15.3e-31100.00translation factor GUF1 homolog, chloroplastic isoform X3 [Cucumis sativus][more]
XP_011653860.15.3e-31100.00translation factor GUF1 homolog, chloroplastic isoform X1 [Cucumis sativus] >KGN... [more]
BLAST of CSPI04G19410 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G08650.12.5e-3190.28Small GTP-binding protein [more]
AT5G39900.11.4e-2168.83Small GTP-binding protein [more]
AT1G06220.21.4e-0841.27Ribosomal protein S5/Elongation factor G/III/V family protein [more]
AT1G06220.11.4e-0841.27Ribosomal protein S5/Elongation factor G/III/V family protein [more]
AT1G56070.11.2e-0759.52Ribosomal protein S5/Elongation factor G/III/V family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..73
e-value: 2.0E-22
score: 81.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..72
IPR000795Translational (tr)-type GTP-binding domainPFAMPF00009GTP_EFTUcoord: 7..71
e-value: 2.4E-21
score: 76.2
IPR000795Translational (tr)-type GTP-binding domainPROSITEPS51722G_TR_2coord: 1..79
score: 23.686159
IPR006297Elongation factor 4PANTHERPTHR43512TRANSLATION FACTOR GUF1-RELATEDcoord: 1..72
NoneNo IPR availablePANTHERPTHR43512:SF4TRANSLATION FACTOR GUF1, MITOCHONDRIALcoord: 1..72

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G19410.1CSPI04G19410.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045727 positive regulation of translation
biological_process GO:0006414 translational elongation
cellular_component GO:0009507 chloroplast
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003746 translation elongation factor activity