CSPI04G18650 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G18650
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr4: 16172494 .. 16172802 (+)
RNA-Seq ExpressionCSPI04G18650
SyntenyCSPI04G18650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGATTCCAAGGTTTTTGGGTGTCGAGTTTGTTGACCAGTATCATGTTTTTGTTTATGTTGTTTGTTTGGAGTGTCATCAAGTGTCAGGTGTTGGCAACATGATTATTGATGGATATGCTTCATTGGTGGTTGCGATTGCTCTCCAAGTTCCTATTCTTTATACTCCGTTACTTGCGGAAGCCTGTGCTTTATGTGAAAAGGAATGCATTTTGCTCACCAACTTCTATTTCCCTTGGTCACTTTTGGTTTGGATTGTCTTGTTTTCCTTCATCTTGTTCAACGACTATCCTATTCTAATGGGGAAG

mRNA sequence

ATGTGGATTCCAAGGTTTTTGGGTGTCGAGTTTGTTGACCAGTATCATGTTTTTGTTTATGTTGTTTGTTTGGAGTGTCATCAAGTGTCAGGTGTTGGCAACATGATTATTGATGGATATGCTTCATTGGTGGTTGCGATTGCTCTCCAAGTTCCTATTCTTTATACTCCGTTACTTGCGGAAGCCTGTGCTTTATGTGAAAAGGAATGCATTTTGCTCACCAACTTCTATTTCCCTTGGTCACTTTTGGTTTGGATTGTCTTGTTTTCCTTCATCTTGTTCAACGACTATCCTATTCTAATGGGGAAG

Coding sequence (CDS)

ATGTGGATTCCAAGGTTTTTGGGTGTCGAGTTTGTTGACCAGTATCATGTTTTTGTTTATGTTGTTTGTTTGGAGTGTCATCAAGTGTCAGGTGTTGGCAACATGATTATTGATGGATATGCTTCATTGGTGGTTGCGATTGCTCTCCAAGTTCCTATTCTTTATACTCCGTTACTTGCGGAAGCCTGTGCTTTATGTGAAAAGGAATGCATTTTGCTCACCAACTTCTATTTCCCTTGGTCACTTTTGGTTTGGATTGTCTTGTTTTCCTTCATCTTGTTCAACGACTATCCTATTCTAATGGGGAAG

Protein sequence

MWIPRFLGVEFVDQYHVFVYVVCLECHQVSGVGNMIIDGYASLVVAIALQVPILYTPLLAEACALCEKECILLTNFYFPWSLLVWIVLFSFILFNDYPILMGK
Homology
[Close]
BLAST of CSPI04G18650 vs. ExPASy TrEMBL
Match: A0A0A0KYC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G416460 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 6.5e-51
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MWIPRFLGVEFVDQYHVFVYVVCLECHQVSGVGNMIIDGYASLVVAIALQVPILYTPLLA 60
           MWIPRFLGVEFVDQYHVFVYVVCLECHQVSGVGNMIIDGYASLVVAIALQVPILYTPLLA
Sbjct: 1   MWIPRFLGVEFVDQYHVFVYVVCLECHQVSGVGNMIIDGYASLVVAIALQVPILYTPLLA 60

Query: 61  EACALCEKECILLTNFYFPWSLLVWIVLFSFILFNDYPILMGK 104
           EACALCEKECILLTNFYFPWSLLVWIVLFSFILFNDYPILMGK
Sbjct: 61  EACALCEKECILLTNFYFPWSLLVWIVLFSFILFNDYPILMGK 103

[Close]
BLAST of CSPI04G18650 vs. NCBI nr
Match: KGN54650.1 (hypothetical protein Csa_012899 [Cucumis sativus])

HSP 1 Score: 209.5 bits (532), Expect = 1.3e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MWIPRFLGVEFVDQYHVFVYVVCLECHQVSGVGNMIIDGYASLVVAIALQVPILYTPLLA 60
           MWIPRFLGVEFVDQYHVFVYVVCLECHQVSGVGNMIIDGYASLVVAIALQVPILYTPLLA
Sbjct: 1   MWIPRFLGVEFVDQYHVFVYVVCLECHQVSGVGNMIIDGYASLVVAIALQVPILYTPLLA 60

Query: 61  EACALCEKECILLTNFYFPWSLLVWIVLFSFILFNDYPILMGK 104
           EACALCEKECILLTNFYFPWSLLVWIVLFSFILFNDYPILMGK
Sbjct: 61  EACALCEKECILLTNFYFPWSLLVWIVLFSFILFNDYPILMGK 103

The following BLAST results are available for this feature:
BLAST of CSPI04G18650 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI04G18650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYC16.5e-51100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G416460 PE=4 SV=1[more]
BLAST of CSPI04G18650 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54650.11.3e-50100.00hypothetical protein Csa_012899 [Cucumis sativus][more]
BLAST of CSPI04G18650 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G18650.1CSPI04G18650.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane