Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCGGCGGCAGATGATCGATCCACAATGAATGAGAAGTTAACCGAATTATCGATGAGGAATTTTCCGATGAAGAGCACAGACAAAGGCGAAGGATCTTCAAAGCGGGAAGAAGAAGATAAGAAGATAAAAAAGAAAACAGATGAGGAAAGTAACAATGATCGCAACGAATTCAAGAAGGTGGAAATGCCGATTTTCAGCGGGGATGATCCATATTCTTGGTTGTTTCGTGCCGAAAGGTATTTTCAAATTCATAAACTTACTGAATCTGAAAAAATGACGGTATCAACTATTAGTTTTGAAGGAGCGGCTTTAAATTGGTATCATTCTCAAGAAGAATGAGAGAAATTTGTCGATTGGGCAAACATGAAGGAGAGGTTATTAATCCGATTTCGATCGGTGAGGGAAGAATCTTTATATGGACGATTCTTACGAAGTCAACATAAAACAACGGTAGAAGAGTATAGAAACCTGTTTGATAAATGGGTAGCACCATTATCGGACATGTCGGAGAAGGTGGTAGAAGAAACGTTCATGTCACGGTTGAAACCATGGATTCAGGCAGAGATGGACTTCTGTGAACCAAAAGGCCTGACACAAATGATGAGAATAGCGCAAAAGGTTGAGAATAGAGAAGATATTCGGAGAGAAGTGAATCTTTCGGGATATTTCGGAGTAAAAGCAACTAATTACCATAACAATACGAAGGTTAATGCGAATGCAAATTTGGGAGAAAATAAAGGAGGAATTGGATGGCTGATGAGGACAATTACCTTAAGAGGAACGACAACAGAAGAGGTGCGAAAGGAAGGACCAACAAAACGATTATTTGACGCCAAATTTCAATCACGAAGAGAAAAGGGATTGTGTTTTCGTTGTAACGAAAAGTACTCTCATGATCATAAATGTAAAGCGAAATAGCAGAGAGAATTGAGAATGATTGTGGTTACGAAGGAAGGTGAAGAGTTCGAAATTAAGGAAGAGAGTAGGGATGGACAGAGAGAACTAAACGCCATTGAAATAACTGAAGAAGGTCGTGCAATAGTAGAATTGTCTATTAATTTAGTAGTTGGATTGCCAAATCCAGGAACAATGAAAGCAAAAGGGGAGATACAAGGGAAGGAAGTCATAGTGCTTGTAGATTGCGGAGCCACGCATAATTTCATATTACAGAAGTTGGTGAATGAACTGCAGTTGAGTACAAAAGATACCTCGAATTATGGTGTCATTTTGGGCTCAGGCACGACAATTAAAGGAAAAGGCATATGAAGTTGTTGAATTGATGTTGGGGGAATGGAGAGTAGTGGATGAATTTCTTCCACTATAATTGGGTGGAGTGGATGCTATCCTGGGAATGCAATGATTGTATTCCTTAGGAATAACTGAAGTCGATTGGAAAAAACTTAGTATTGTCATTTGAACATCAAGGGAAAAAGATAGTCATACAAGGAGATCCAAGCCTGACAAAAGCCAGAGTCAGTCTAAAAAGTTTGTTGAAGAATTTGGGGAGTGAAGATCAAAGATTTTTAGTAGAATGTAGATCCTTGGAAAGGAGCGAGTCATGGGAGGAGGAAAATCATATTGAAGAAGAATTGACTGATGAAGAGTCAATAACTGTGATACTTAAGAGGTTTGAGGATGTGTTTGAATGA
mRNA sequence
ATGGAATCGGCGGCAGATGATCGATCCACAATGAATGAGAAGTTAACCGAATTATCGATGAGGAATTTTCCGATGAAGAGCACAGACAAAGGCGAAGGATCTTCAAAGCGGGAAGAAGAAGATAAGAAGATAAAAAAGAAAACAGATGAGGAAAGTAACAATGATCGCAACGAATTCAAGAAGGTGGAAATGCCGATTTTCAGCGGGGATGATCCATATTCTTGGTTGTTTCGTGCCGAAAGGTATTTTCAAATTCATAAACTTACTGAATCTGAAAAAATGACGGAGAGGTTATTAATCCGATTTCGATCGGTGAGGGAAGAATCTTTATATGGACGATTCTTACGAAGTCAACATAAAACAACGGTAGAAGAGTATAGAAACCTGTTTGATAAATGGGTAGCACCATTATCGGACATGTCGGAGAAGGTGGTAGAAGAAACGTTCATGTCACGGTTGAAACCATGGATTCAGGCAGAGATGGACTTCTGTGAACCAAAAGGCCTGACACAAATGATGAGAATAGCGCAAAAGGTTGAGAATAGAGAAGATATTCGGAGAGAAGTGAATCTTTCGGGATATTTCGGAGTAAAAGCAACTAATTACCATAACAATACGAAGGTTAATGCGAATGCAAATTTGGGAGAAAATAAAGGAGGAATTGGATGGCTGATGAGGACAATTACCTTAAGAGGAACGACAACAGAAGAGGAAGGTGAAGAGTTCGAAATTAAGGAAGAGAGTAGGGATGGACAGAGAGAACTAAACGCCATTGAAATAACTGAAGAAGGTCGTGCAATAGTAGAATTGTCTATTAATTTAGTAGTTGGATTGCCAAATCCAGGAACAATGAAAGCAAAAGGGGAGATACAAGGGAAGGAAGTCATAGTGCTTGTAGATTGCGGAGCCACGCATAATTTCATATTACAGAAGTTGGTGAATGAACTGCAGTTGAGGAAAAAGATAGTCATACAAGGAGATCCAAGCCTGACAAAAGCCAGAGTCAGTCTAAAAAGTTTGTTGAAGAATTTGGGGAGTGAAGATCAAAGATTTTTAGTAGAATGTAGATCCTTGGAAAGGAGCGAGTCATGGGAGGAGGAAAATCATATTGAAGAAGAATTGACTGATGAAGAGTCAATAACTGTGATACTTAAGAGGTTTGAGGATGTGTTTGAATGA
Coding sequence (CDS)
ATGGAATCGGCGGCAGATGATCGATCCACAATGAATGAGAAGTTAACCGAATTATCGATGAGGAATTTTCCGATGAAGAGCACAGACAAAGGCGAAGGATCTTCAAAGCGGGAAGAAGAAGATAAGAAGATAAAAAAGAAAACAGATGAGGAAAGTAACAATGATCGCAACGAATTCAAGAAGGTGGAAATGCCGATTTTCAGCGGGGATGATCCATATTCTTGGTTGTTTCGTGCCGAAAGGTATTTTCAAATTCATAAACTTACTGAATCTGAAAAAATGACGGAGAGGTTATTAATCCGATTTCGATCGGTGAGGGAAGAATCTTTATATGGACGATTCTTACGAAGTCAACATAAAACAACGGTAGAAGAGTATAGAAACCTGTTTGATAAATGGGTAGCACCATTATCGGACATGTCGGAGAAGGTGGTAGAAGAAACGTTCATGTCACGGTTGAAACCATGGATTCAGGCAGAGATGGACTTCTGTGAACCAAAAGGCCTGACACAAATGATGAGAATAGCGCAAAAGGTTGAGAATAGAGAAGATATTCGGAGAGAAGTGAATCTTTCGGGATATTTCGGAGTAAAAGCAACTAATTACCATAACAATACGAAGGTTAATGCGAATGCAAATTTGGGAGAAAATAAAGGAGGAATTGGATGGCTGATGAGGACAATTACCTTAAGAGGAACGACAACAGAAGAGGAAGGTGAAGAGTTCGAAATTAAGGAAGAGAGTAGGGATGGACAGAGAGAACTAAACGCCATTGAAATAACTGAAGAAGGTCGTGCAATAGTAGAATTGTCTATTAATTTAGTAGTTGGATTGCCAAATCCAGGAACAATGAAAGCAAAAGGGGAGATACAAGGGAAGGAAGTCATAGTGCTTGTAGATTGCGGAGCCACGCATAATTTCATATTACAGAAGTTGGTGAATGAACTGCAGTTGAGGAAAAAGATAGTCATACAAGGAGATCCAAGCCTGACAAAAGCCAGAGTCAGTCTAAAAAGTTTGTTGAAGAATTTGGGGAGTGAAGATCAAAGATTTTTAGTAGAATGTAGATCCTTGGAAAGGAGCGAGTCATGGGAGGAGGAAAATCATATTGAAGAAGAATTGACTGATGAAGAGTCAATAACTGTGATACTTAAGAGGTTTGAGGATGTGTTTGAATGA
Protein sequence
MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGSSKREEEDKKIKKKTDEESNNDRNEFKKVEMPIFSGDDPYSWLFRAERYFQIHKLTESEKMTERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEKVVEETFMSRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVKATNYHNNTKVNANANLGENKGGIGWLMRTITLRGTTTEEEGEEFEIKEESRDGQRELNAIEITEEGRAIVELSINLVVGLPNPGTMKAKGEIQGKEVIVLVDCGATHNFILQKLVNELQLRKKIVIQGDPSLTKARVSLKSLLKNLGSEDQRFLVECRSLERSESWEEENHIEEELTDEESITVILKRFEDVFE*
Homology
BLAST of CSPI04G18050 vs. ExPASy TrEMBL
Match:
A0A5D3BEL2 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00340 PE=4 SV=1)
HSP 1 Score: 312.0 bits (798), Expect = 3.6e-81
Identity = 216/552 (39.13%), Postives = 276/552 (50.00%), Query Frame = 0
Query: 1 MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGSSKREEEDKKIKKKTDEESNNDRNEFK 60
ME A +RS E++ E +N P + + SS R+ E+ KK +E++NDR++FK
Sbjct: 59 MEMNAKERSMAGERMNESDTQNSPTVKSKNDKASSSRDVEEINTKKNEPDENSNDRSKFK 118
Query: 61 KVEMPIFSGDDPYSWLFRAERYFQIHKLTESEKM-------------------------- 120
KVEMP+F+G+DP SWLFRAERYFQIHKLTESEKM
Sbjct: 119 KVEMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRAQEEREKFVS 178
Query: 121 ----TERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEKVVEETFM 180
ERLLIRF+S RE + +GRFLR Q +TTVEEYRNLFDK VAPLSD+ ++VVEETFM
Sbjct: 179 WTNLKERLLIRFQSTREGTAFGRFLRIQQETTVEEYRNLFDKLVAPLSDVEDRVVEETFM 238
Query: 181 SRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVK-ATNYHNNTKVN 240
S L PWI+AE+ C PKGL +MMR AQ VE+RE +R NL+GY G K +T TK
Sbjct: 239 SGLFPWIRAEVILCRPKGLAEMMRTAQLVEDREVLRNAANLNGYIGGKSSTPTSTGTKHY 298
Query: 241 ANANLGENKGGIGWLMRTITLRGTT---TEEEG--------------------------- 300
+ ENK + +RTITL+ T +EG
Sbjct: 299 YHQQNKENKANAPFPIRTITLKSPNSGETRKEGTSKRLPDAEFQLRREKGLCFKCNEKYS 358
Query: 301 ----------------------EEFEIKEESRDGQRELNAIEITEEGRAIVELSINLVVG 360
EE EI EE+ EL +E+ + A VELSIN VVG
Sbjct: 359 ADHKCKMREQRELRMFVVKDNNEELEIVEETETDTAELRTVEVRPQATACVELSINSVVG 418
Query: 361 LPNPGTMKAKGEIQGKEVIVLVDCGATHNFILQKLVNELQL------------------- 393
L +PGTMK +G +QGKEV++L+DCGATHNF+ +KLV LQL
Sbjct: 419 LNDPGTMKVRGTLQGKEVVILIDCGATHNFVSEKLVTTLQLPIKETAHYGVILGSGTAIQ 478
BLAST of CSPI04G18050 vs. ExPASy TrEMBL
Match:
A0A5D3DC20 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00900 PE=4 SV=1)
HSP 1 Score: 312.0 bits (798), Expect = 3.6e-81
Identity = 216/552 (39.13%), Postives = 276/552 (50.00%), Query Frame = 0
Query: 1 MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGSSKREEEDKKIKKKTDEESNNDRNEFK 60
ME A +RS E++ E +N P + + SS R+ E+ KK +E++NDR++FK
Sbjct: 59 MEMNAKERSMAGERMNESDTQNSPTVKSKNDKASSSRDVEEINTKKNEPDENSNDRSKFK 118
Query: 61 KVEMPIFSGDDPYSWLFRAERYFQIHKLTESEKM-------------------------- 120
KVEMP+F+G+DP SWLFRAERYFQIHKLTESEKM
Sbjct: 119 KVEMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRAQEEREKFVS 178
Query: 121 ----TERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEKVVEETFM 180
ERLLIRF+S RE + +GRFLR Q +TTVEEYRNLFDK VAPLSD+ ++VVEETFM
Sbjct: 179 WTNLKERLLIRFQSTREGTAFGRFLRIQQETTVEEYRNLFDKLVAPLSDVEDRVVEETFM 238
Query: 181 SRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVK-ATNYHNNTKVN 240
S L PWI+AE+ C PKGL +MMR AQ VE+RE +R NL+GY G K +T TK
Sbjct: 239 SGLFPWIRAEVILCRPKGLAEMMRTAQLVEDREVLRNAANLNGYIGGKSSTPTSTGTKHY 298
Query: 241 ANANLGENKGGIGWLMRTITLRGTT---TEEEG--------------------------- 300
+ ENK + +RTITL+ T +EG
Sbjct: 299 YHQQNKENKANAPFPIRTITLKSPNSGETRKEGTSKRLPDAEFQLRREKGLCFKCNEKYS 358
Query: 301 ----------------------EEFEIKEESRDGQRELNAIEITEEGRAIVELSINLVVG 360
EE EI EE+ EL +E+ + A VELSIN VVG
Sbjct: 359 ADHKCKMREQRELRMFVVKDNNEELEIVEETETDTAELRTVEVRPQATACVELSINSVVG 418
Query: 361 LPNPGTMKAKGEIQGKEVIVLVDCGATHNFILQKLVNELQL------------------- 393
L +PGTMK +G +QGKEV++L+DCGATHNF+ +KLV LQL
Sbjct: 419 LNDPGTMKVRGTLQGKEVVILIDCGATHNFVSEKLVTTLQLPIKETAHYGVILGSGTAIQ 478
BLAST of CSPI04G18050 vs. ExPASy TrEMBL
Match:
A0A5A7VJA0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001740 PE=4 SV=1)
HSP 1 Score: 310.8 bits (795), Expect = 7.9e-81
Identity = 216/552 (39.13%), Postives = 275/552 (49.82%), Query Frame = 0
Query: 1 MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGSSKREEEDKKIKKKTDEESNNDRNEFK 60
ME A +RS E++ E +N P + + SS R+ E+ KK +E++NDR++FK
Sbjct: 59 MEMNAKERSMAGERMNESDTQNSPTVKSKNDKASSSRDVEEINTKKNEPDENSNDRSKFK 118
Query: 61 KVEMPIFSGDDPYSWLFRAERYFQIHKLTESEKM-------------------------- 120
KVEMP+F G+DP SWLFRAERYFQIHKLTESEKM
Sbjct: 119 KVEMPVFIGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRAQEEREKFVS 178
Query: 121 ----TERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEKVVEETFM 180
ERLLIRF+S RE + +GRFLR Q +TTVEEYRNLFDK VAPLSD+ ++VVEETFM
Sbjct: 179 WTNLKERLLIRFQSTREGTAFGRFLRIQQETTVEEYRNLFDKLVAPLSDVEDRVVEETFM 238
Query: 181 SRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVK-ATNYHNNTKVN 240
S L PWI+AE+ C PKGL +MMR AQ VE+RE +R NL+GY G K +T TK
Sbjct: 239 SGLFPWIRAEVILCRPKGLAEMMRTAQLVEDREVLRNAANLNGYIGGKSSTPTSTGTKHY 298
Query: 241 ANANLGENKGGIGWLMRTITLRGTT---TEEEG--------------------------- 300
+ ENK + +RTITL+ T +EG
Sbjct: 299 YHQQNKENKANAPFPIRTITLKSPNSGETRKEGTSKRLPDAEFQLRREKGLCFKCNEKYS 358
Query: 301 ----------------------EEFEIKEESRDGQRELNAIEITEEGRAIVELSINLVVG 360
EE EI EE+ EL +E+ + A VELSIN VVG
Sbjct: 359 ADHKCKMREQRELRMFVVKDNNEELEIVEETETDTAELRTVEVRPQATACVELSINSVVG 418
Query: 361 LPNPGTMKAKGEIQGKEVIVLVDCGATHNFILQKLVNELQL------------------- 393
L +PGTMK +G +QGKEV++L+DCGATHNF+ +KLV LQL
Sbjct: 419 LNDPGTMKVRGTLQGKEVVILIDCGATHNFVSEKLVTTLQLPIKETAHYGVILGSGTAIQ 478
BLAST of CSPI04G18050 vs. ExPASy TrEMBL
Match:
A0A5A7V5H5 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2406G00250 PE=4 SV=1)
HSP 1 Score: 308.5 bits (789), Expect = 3.9e-80
Identity = 215/552 (38.95%), Postives = 274/552 (49.64%), Query Frame = 0
Query: 1 MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGSSKREEEDKKIKKKTDEESNNDRNEFK 60
ME A +RS E++ E +N P + + SS R+ E+ KK +E++NDR++FK
Sbjct: 59 MEMNAKERSMAGERMNESDTQNSPTVKSKNDKASSSRDVEEINTKKNEPDENSNDRSKFK 118
Query: 61 KVEMPIFSGDDPYSWLFRAERYFQIHKLTESEKM-------------------------- 120
KVEMP+F G+DP SWLFRAERYFQIHKLTESEKM
Sbjct: 119 KVEMPVFIGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRAQEEREKFVS 178
Query: 121 ----TERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEKVVEETFM 180
ERLLIRF+S RE + +GRFLR Q +TTVEEYRNLFDK VAPL D+ ++VVEETFM
Sbjct: 179 WTNLKERLLIRFQSTREGTAFGRFLRIQQETTVEEYRNLFDKLVAPLFDVEDRVVEETFM 238
Query: 181 SRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVK-ATNYHNNTKVN 240
S L PWI+AE+ C PKGL +MMR AQ VE+RE +R NL+GY G K +T TK
Sbjct: 239 SGLFPWIRAEVILCRPKGLAEMMRTAQLVEDREILRNAANLNGYIGGKSSTPTSTGTKHY 298
Query: 241 ANANLGENKGGIGWLMRTITLRGTT---TEEEG--------------------------- 300
+ ENK + +RTITL+ T +EG
Sbjct: 299 HHQQNKENKANAPFPIRTITLKSPNSGETRKEGTSKRLPDAEFQLRREKGLCFKCNEKYS 358
Query: 301 ----------------------EEFEIKEESRDGQRELNAIEITEEGRAIVELSINLVVG 360
EE EI EE+ EL +E+ + A VELSIN VVG
Sbjct: 359 ADHKCKMREQRELRMFVVKDNNEELEIVEETETDTAELRTVEVQPQATACVELSINSVVG 418
Query: 361 LPNPGTMKAKGEIQGKEVIVLVDCGATHNFILQKLVNELQL------------------- 393
L +PGTMK +G +QGKEV++L+DCGATHNF+ +KLV LQL
Sbjct: 419 LNDPGTMKVRGTLQGKEVVILIDCGATHNFVSEKLVTTLQLPIKETAHYGVILGSGTAIQ 478
BLAST of CSPI04G18050 vs. ExPASy TrEMBL
Match:
A0A5A7TAV1 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold190G00200 PE=4 SV=1)
HSP 1 Score: 305.1 bits (780), Expect = 4.3e-79
Identity = 202/498 (40.56%), Postives = 276/498 (55.42%), Query Frame = 0
Query: 1 MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGSSKREEE-------DKKIKKKTDEESN 60
ME+ A +RS M +K E S RN E SS + EE D+ +K +E+
Sbjct: 59 METNAWERSAMKQKTIETSARNAENDKRKGNEASSSKTEESKQNFGDDRNERKSETDENY 118
Query: 61 NDRNEFKKVEMPIFSGDDPYSWLFRAERYFQIHKLTESEK-------------------- 120
+DRN+FKKVEM +F+ +DP SWLFRAERYFQIHKLTESEK
Sbjct: 119 SDRNKFKKVEMSVFTSEDPDSWLFRAERYFQIHKLTESEKVLVSTVSFDGPALNWFRSQE 178
Query: 121 ----------MTERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEK 180
+ ERLL+RFR ++E++ +FLR + ++++EEYRNLFDK VAPLSD+ E+
Sbjct: 179 ERDKFTSRTNLKERLLVRFRLSKDETISAQFLRIKQESSIEEYRNLFDKLVAPLSDLPER 238
Query: 181 VVEETFMSRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVKATNYH 240
VVE+TFM+ L PWI+AE+ FC PK L +MM +AQ VENRE+ RE NL+GY K
Sbjct: 239 VVEDTFMNGLLPWIRAEVAFCRPKSLAEMMEVAQLVENRENFTREANLNGYSDGKNFVQT 298
Query: 241 NNTKVNANANLGENKGGIGWLMRTITLR----------GTTTEEEGEEFEIKE------- 300
K N GE KG + + TITLR GT EF+I++
Sbjct: 299 LGGKKTTNNTTGETKGNTAFPIITITLRSPAQGENRREGTYKRLSDAEFQIRKKKVTNDQ 358
Query: 301 ---ESRDGQR----ELNAIEITEEGRAIVELSINLVVGLPNPGTMKAKGEIQGKEVIVLV 360
E DG+ ELN IE+ + V+LSIN VVGL +PGTMK +G+++ +EVI+L+
Sbjct: 359 EELEIVDGEEVKKGELNKIEVKGDTTTFVKLSINSVVGLNDPGTMKVRGKLRDEEVIILI 418
Query: 361 DCGATHNFILQKLVNELQLR---------------------------------------- 393
+CGATHNF+ +KLV +L ++
Sbjct: 419 NCGATHNFVSEKLVKKLLIQIKETAHYGVILGSGPAVQGMQWLHSLGVTTVDWKNLLLTS 478
BLAST of CSPI04G18050 vs. NCBI nr
Match:
XP_031745972.1 (uncharacterized protein LOC116406393 [Cucumis sativus])
HSP 1 Score: 314.3 bits (804), Expect = 1.5e-81
Identity = 211/550 (38.36%), Postives = 292/550 (53.09%), Query Frame = 0
Query: 1 MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGS-SKREEEDKKIKKKTDEESNNDRNEF 60
M+S A +R+T +EKL + + + +++GE S S+R E + K ++ DEE N+R++F
Sbjct: 52 MDSIAKERTTTSEKLADYGAQETGGRKSNEGESSTSRRGENETKERRTEDEEGANERDKF 111
Query: 61 KKVEMPIFSGDDPYSWLFRAERYFQIHKLTESEK-------------------------- 120
KKVEMP+F+G+DP SWLFRA+RYFQIHKL+++EK
Sbjct: 112 KKVEMPVFNGEDPDSWLFRADRYFQIHKLSDAEKVLVATISFEGPALNWYRAQEERDKFT 171
Query: 121 ----MTERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEKVVEETF 180
+ ERLL+RFRS RE S+ G+FLR + +TTVEEYRN FD+ +APL+D+ ++VVEETF
Sbjct: 172 GWHNLKERLLVRFRSSREGSICGQFLRIKQQTTVEEYRNEFDRLMAPLADLQDRVVEETF 231
Query: 181 MSRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVKATNYHNN-TKV 240
M+ L PWI+AE+ FC+P GL +MM AQ VENRE IR+E NL+GY K +++ +
Sbjct: 232 MNGLFPWIKAEVVFCKPVGLAEMMHAAQLVENREIIRKEANLNGYAKGKYPPPNSSIIRS 291
Query: 241 NANANLGENKGGIGWLMRTITLRGTTTE-------------------------------- 300
+A N E+KG + +RT+TLR T E
Sbjct: 292 SAAMNHSEDKGNTIFPIRTVTLRTATGEVKKEGPTKRLPDAEFQARKEKGLCFRCNEKYF 351
Query: 301 ------------------EEGEEFEIKEESRDGQRELNAIEITEEGRAIVELSINLVVGL 360
+E EE+EI EE+ + ELN +EI E +AIVELSIN VVGL
Sbjct: 352 HGHRCKGREQRELRMYVVKEDEEYEIVEEAEWDETELNCVEINPEDQAIVELSINSVVGL 411
Query: 361 PNPGTMKAKGEIQGKEVIVLVDCGATHNFILQKLVNELQL-------------------- 392
NPGTMK +G+I+ +EVI+L+DCGATHNFI K+V EL L
Sbjct: 412 TNPGTMKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILGSCAAVKG 471
BLAST of CSPI04G18050 vs. NCBI nr
Match:
TYJ96875.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK19540.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 312.0 bits (798), Expect = 7.3e-81
Identity = 216/552 (39.13%), Postives = 276/552 (50.00%), Query Frame = 0
Query: 1 MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGSSKREEEDKKIKKKTDEESNNDRNEFK 60
ME A +RS E++ E +N P + + SS R+ E+ KK +E++NDR++FK
Sbjct: 59 MEMNAKERSMAGERMNESDTQNSPTVKSKNDKASSSRDVEEINTKKNEPDENSNDRSKFK 118
Query: 61 KVEMPIFSGDDPYSWLFRAERYFQIHKLTESEKM-------------------------- 120
KVEMP+F+G+DP SWLFRAERYFQIHKLTESEKM
Sbjct: 119 KVEMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRAQEEREKFVS 178
Query: 121 ----TERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEKVVEETFM 180
ERLLIRF+S RE + +GRFLR Q +TTVEEYRNLFDK VAPLSD+ ++VVEETFM
Sbjct: 179 WTNLKERLLIRFQSTREGTAFGRFLRIQQETTVEEYRNLFDKLVAPLSDVEDRVVEETFM 238
Query: 181 SRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVK-ATNYHNNTKVN 240
S L PWI+AE+ C PKGL +MMR AQ VE+RE +R NL+GY G K +T TK
Sbjct: 239 SGLFPWIRAEVILCRPKGLAEMMRTAQLVEDREVLRNAANLNGYIGGKSSTPTSTGTKHY 298
Query: 241 ANANLGENKGGIGWLMRTITLRGTT---TEEEG--------------------------- 300
+ ENK + +RTITL+ T +EG
Sbjct: 299 YHQQNKENKANAPFPIRTITLKSPNSGETRKEGTSKRLPDAEFQLRREKGLCFKCNEKYS 358
Query: 301 ----------------------EEFEIKEESRDGQRELNAIEITEEGRAIVELSINLVVG 360
EE EI EE+ EL +E+ + A VELSIN VVG
Sbjct: 359 ADHKCKMREQRELRMFVVKDNNEELEIVEETETDTAELRTVEVRPQATACVELSINSVVG 418
Query: 361 LPNPGTMKAKGEIQGKEVIVLVDCGATHNFILQKLVNELQL------------------- 393
L +PGTMK +G +QGKEV++L+DCGATHNF+ +KLV LQL
Sbjct: 419 LNDPGTMKVRGTLQGKEVVILIDCGATHNFVSEKLVTTLQLPIKETAHYGVILGSGTAIQ 478
BLAST of CSPI04G18050 vs. NCBI nr
Match:
TYK21115.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 312.0 bits (798), Expect = 7.3e-81
Identity = 216/552 (39.13%), Postives = 276/552 (50.00%), Query Frame = 0
Query: 1 MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGSSKREEEDKKIKKKTDEESNNDRNEFK 60
ME A +RS E++ E +N P + + SS R+ E+ KK +E++NDR++FK
Sbjct: 59 MEMNAKERSMAGERMNESDTQNSPTVKSKNDKASSSRDVEEINTKKNEPDENSNDRSKFK 118
Query: 61 KVEMPIFSGDDPYSWLFRAERYFQIHKLTESEKM-------------------------- 120
KVEMP+F+G+DP SWLFRAERYFQIHKLTESEKM
Sbjct: 119 KVEMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRAQEEREKFVS 178
Query: 121 ----TERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEKVVEETFM 180
ERLLIRF+S RE + +GRFLR Q +TTVEEYRNLFDK VAPLSD+ ++VVEETFM
Sbjct: 179 WTNLKERLLIRFQSTREGTAFGRFLRIQQETTVEEYRNLFDKLVAPLSDVEDRVVEETFM 238
Query: 181 SRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVK-ATNYHNNTKVN 240
S L PWI+AE+ C PKGL +MMR AQ VE+RE +R NL+GY G K +T TK
Sbjct: 239 SGLFPWIRAEVILCRPKGLAEMMRTAQLVEDREVLRNAANLNGYIGGKSSTPTSTGTKHY 298
Query: 241 ANANLGENKGGIGWLMRTITLRGTT---TEEEG--------------------------- 300
+ ENK + +RTITL+ T +EG
Sbjct: 299 YHQQNKENKANAPFPIRTITLKSPNSGETRKEGTSKRLPDAEFQLRREKGLCFKCNEKYS 358
Query: 301 ----------------------EEFEIKEESRDGQRELNAIEITEEGRAIVELSINLVVG 360
EE EI EE+ EL +E+ + A VELSIN VVG
Sbjct: 359 ADHKCKMREQRELRMFVVKDNNEELEIVEETETDTAELRTVEVRPQATACVELSINSVVG 418
Query: 361 LPNPGTMKAKGEIQGKEVIVLVDCGATHNFILQKLVNELQL------------------- 393
L +PGTMK +G +QGKEV++L+DCGATHNF+ +KLV LQL
Sbjct: 419 LNDPGTMKVRGTLQGKEVVILIDCGATHNFVSEKLVTTLQLPIKETAHYGVILGSGTAIQ 478
BLAST of CSPI04G18050 vs. NCBI nr
Match:
KAA0068193.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 310.8 bits (795), Expect = 1.6e-80
Identity = 216/552 (39.13%), Postives = 275/552 (49.82%), Query Frame = 0
Query: 1 MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGSSKREEEDKKIKKKTDEESNNDRNEFK 60
ME A +RS E++ E +N P + + SS R+ E+ KK +E++NDR++FK
Sbjct: 59 MEMNAKERSMAGERMNESDTQNSPTVKSKNDKASSSRDVEEINTKKNEPDENSNDRSKFK 118
Query: 61 KVEMPIFSGDDPYSWLFRAERYFQIHKLTESEKM-------------------------- 120
KVEMP+F G+DP SWLFRAERYFQIHKLTESEKM
Sbjct: 119 KVEMPVFIGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRAQEEREKFVS 178
Query: 121 ----TERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEKVVEETFM 180
ERLLIRF+S RE + +GRFLR Q +TTVEEYRNLFDK VAPLSD+ ++VVEETFM
Sbjct: 179 WTNLKERLLIRFQSTREGTAFGRFLRIQQETTVEEYRNLFDKLVAPLSDVEDRVVEETFM 238
Query: 181 SRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVK-ATNYHNNTKVN 240
S L PWI+AE+ C PKGL +MMR AQ VE+RE +R NL+GY G K +T TK
Sbjct: 239 SGLFPWIRAEVILCRPKGLAEMMRTAQLVEDREVLRNAANLNGYIGGKSSTPTSTGTKHY 298
Query: 241 ANANLGENKGGIGWLMRTITLRGTT---TEEEG--------------------------- 300
+ ENK + +RTITL+ T +EG
Sbjct: 299 YHQQNKENKANAPFPIRTITLKSPNSGETRKEGTSKRLPDAEFQLRREKGLCFKCNEKYS 358
Query: 301 ----------------------EEFEIKEESRDGQRELNAIEITEEGRAIVELSINLVVG 360
EE EI EE+ EL +E+ + A VELSIN VVG
Sbjct: 359 ADHKCKMREQRELRMFVVKDNNEELEIVEETETDTAELRTVEVRPQATACVELSINSVVG 418
Query: 361 LPNPGTMKAKGEIQGKEVIVLVDCGATHNFILQKLVNELQL------------------- 393
L +PGTMK +G +QGKEV++L+DCGATHNF+ +KLV LQL
Sbjct: 419 LNDPGTMKVRGTLQGKEVVILIDCGATHNFVSEKLVTTLQLPIKETAHYGVILGSGTAIQ 478
BLAST of CSPI04G18050 vs. NCBI nr
Match:
KAA0062868.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 308.5 bits (789), Expect = 8.1e-80
Identity = 215/552 (38.95%), Postives = 274/552 (49.64%), Query Frame = 0
Query: 1 MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGSSKREEEDKKIKKKTDEESNNDRNEFK 60
ME A +RS E++ E +N P + + SS R+ E+ KK +E++NDR++FK
Sbjct: 59 MEMNAKERSMAGERMNESDTQNSPTVKSKNDKASSSRDVEEINTKKNEPDENSNDRSKFK 118
Query: 61 KVEMPIFSGDDPYSWLFRAERYFQIHKLTESEKM-------------------------- 120
KVEMP+F G+DP SWLFRAERYFQIHKLTESEKM
Sbjct: 119 KVEMPVFIGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRAQEEREKFVS 178
Query: 121 ----TERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEKVVEETFM 180
ERLLIRF+S RE + +GRFLR Q +TTVEEYRNLFDK VAPL D+ ++VVEETFM
Sbjct: 179 WTNLKERLLIRFQSTREGTAFGRFLRIQQETTVEEYRNLFDKLVAPLFDVEDRVVEETFM 238
Query: 181 SRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVK-ATNYHNNTKVN 240
S L PWI+AE+ C PKGL +MMR AQ VE+RE +R NL+GY G K +T TK
Sbjct: 239 SGLFPWIRAEVILCRPKGLAEMMRTAQLVEDREILRNAANLNGYIGGKSSTPTSTGTKHY 298
Query: 241 ANANLGENKGGIGWLMRTITLRGTT---TEEEG--------------------------- 300
+ ENK + +RTITL+ T +EG
Sbjct: 299 HHQQNKENKANAPFPIRTITLKSPNSGETRKEGTSKRLPDAEFQLRREKGLCFKCNEKYS 358
Query: 301 ----------------------EEFEIKEESRDGQRELNAIEITEEGRAIVELSINLVVG 360
EE EI EE+ EL +E+ + A VELSIN VVG
Sbjct: 359 ADHKCKMREQRELRMFVVKDNNEELEIVEETETDTAELRTVEVQPQATACVELSINSVVG 418
Query: 361 LPNPGTMKAKGEIQGKEVIVLVDCGATHNFILQKLVNELQL------------------- 393
L +PGTMK +G +QGKEV++L+DCGATHNF+ +KLV LQL
Sbjct: 419 LNDPGTMKVRGTLQGKEVVILIDCGATHNFVSEKLVTTLQLPIKETAHYGVILGSGTAIQ 478
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BEL2 | 3.6e-81 | 39.13 | Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5D3DC20 | 3.6e-81 | 39.13 | Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G... | [more] |
A0A5A7VJA0 | 7.9e-81 | 39.13 | Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5A7V5H5 | 3.9e-80 | 38.95 | Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5A7TAV1 | 4.3e-79 | 40.56 | Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G... | [more] |
Match Name | E-value | Identity | Description | |
XP_031745972.1 | 1.5e-81 | 38.36 | uncharacterized protein LOC116406393 [Cucumis sativus] | [more] |
TYJ96875.1 | 7.3e-81 | 39.13 | Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK19540.1 Ty3/gyp... | [more] |
TYK21115.1 | 7.3e-81 | 39.13 | transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] | [more] |
KAA0068193.1 | 1.6e-80 | 39.13 | Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0062868.1 | 8.1e-80 | 38.95 | Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |