CSPI04G18050 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G18050
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTy3/gypsy retrotransposon protein
LocationChr4: 15450546 .. 15452200 (-)
RNA-Seq ExpressionCSPI04G18050
SyntenyCSPI04G18050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCGGCGGCAGATGATCGATCCACAATGAATGAGAAGTTAACCGAATTATCGATGAGGAATTTTCCGATGAAGAGCACAGACAAAGGCGAAGGATCTTCAAAGCGGGAAGAAGAAGATAAGAAGATAAAAAAGAAAACAGATGAGGAAAGTAACAATGATCGCAACGAATTCAAGAAGGTGGAAATGCCGATTTTCAGCGGGGATGATCCATATTCTTGGTTGTTTCGTGCCGAAAGGTATTTTCAAATTCATAAACTTACTGAATCTGAAAAAATGACGGTATCAACTATTAGTTTTGAAGGAGCGGCTTTAAATTGGTATCATTCTCAAGAAGAATGAGAGAAATTTGTCGATTGGGCAAACATGAAGGAGAGGTTATTAATCCGATTTCGATCGGTGAGGGAAGAATCTTTATATGGACGATTCTTACGAAGTCAACATAAAACAACGGTAGAAGAGTATAGAAACCTGTTTGATAAATGGGTAGCACCATTATCGGACATGTCGGAGAAGGTGGTAGAAGAAACGTTCATGTCACGGTTGAAACCATGGATTCAGGCAGAGATGGACTTCTGTGAACCAAAAGGCCTGACACAAATGATGAGAATAGCGCAAAAGGTTGAGAATAGAGAAGATATTCGGAGAGAAGTGAATCTTTCGGGATATTTCGGAGTAAAAGCAACTAATTACCATAACAATACGAAGGTTAATGCGAATGCAAATTTGGGAGAAAATAAAGGAGGAATTGGATGGCTGATGAGGACAATTACCTTAAGAGGAACGACAACAGAAGAGGTGCGAAAGGAAGGACCAACAAAACGATTATTTGACGCCAAATTTCAATCACGAAGAGAAAAGGGATTGTGTTTTCGTTGTAACGAAAAGTACTCTCATGATCATAAATGTAAAGCGAAATAGCAGAGAGAATTGAGAATGATTGTGGTTACGAAGGAAGGTGAAGAGTTCGAAATTAAGGAAGAGAGTAGGGATGGACAGAGAGAACTAAACGCCATTGAAATAACTGAAGAAGGTCGTGCAATAGTAGAATTGTCTATTAATTTAGTAGTTGGATTGCCAAATCCAGGAACAATGAAAGCAAAAGGGGAGATACAAGGGAAGGAAGTCATAGTGCTTGTAGATTGCGGAGCCACGCATAATTTCATATTACAGAAGTTGGTGAATGAACTGCAGTTGAGTACAAAAGATACCTCGAATTATGGTGTCATTTTGGGCTCAGGCACGACAATTAAAGGAAAAGGCATATGAAGTTGTTGAATTGATGTTGGGGGAATGGAGAGTAGTGGATGAATTTCTTCCACTATAATTGGGTGGAGTGGATGCTATCCTGGGAATGCAATGATTGTATTCCTTAGGAATAACTGAAGTCGATTGGAAAAAACTTAGTATTGTCATTTGAACATCAAGGGAAAAAGATAGTCATACAAGGAGATCCAAGCCTGACAAAAGCCAGAGTCAGTCTAAAAAGTTTGTTGAAGAATTTGGGGAGTGAAGATCAAAGATTTTTAGTAGAATGTAGATCCTTGGAAAGGAGCGAGTCATGGGAGGAGGAAAATCATATTGAAGAAGAATTGACTGATGAAGAGTCAATAACTGTGATACTTAAGAGGTTTGAGGATGTGTTTGAATGA

mRNA sequence

ATGGAATCGGCGGCAGATGATCGATCCACAATGAATGAGAAGTTAACCGAATTATCGATGAGGAATTTTCCGATGAAGAGCACAGACAAAGGCGAAGGATCTTCAAAGCGGGAAGAAGAAGATAAGAAGATAAAAAAGAAAACAGATGAGGAAAGTAACAATGATCGCAACGAATTCAAGAAGGTGGAAATGCCGATTTTCAGCGGGGATGATCCATATTCTTGGTTGTTTCGTGCCGAAAGGTATTTTCAAATTCATAAACTTACTGAATCTGAAAAAATGACGGAGAGGTTATTAATCCGATTTCGATCGGTGAGGGAAGAATCTTTATATGGACGATTCTTACGAAGTCAACATAAAACAACGGTAGAAGAGTATAGAAACCTGTTTGATAAATGGGTAGCACCATTATCGGACATGTCGGAGAAGGTGGTAGAAGAAACGTTCATGTCACGGTTGAAACCATGGATTCAGGCAGAGATGGACTTCTGTGAACCAAAAGGCCTGACACAAATGATGAGAATAGCGCAAAAGGTTGAGAATAGAGAAGATATTCGGAGAGAAGTGAATCTTTCGGGATATTTCGGAGTAAAAGCAACTAATTACCATAACAATACGAAGGTTAATGCGAATGCAAATTTGGGAGAAAATAAAGGAGGAATTGGATGGCTGATGAGGACAATTACCTTAAGAGGAACGACAACAGAAGAGGAAGGTGAAGAGTTCGAAATTAAGGAAGAGAGTAGGGATGGACAGAGAGAACTAAACGCCATTGAAATAACTGAAGAAGGTCGTGCAATAGTAGAATTGTCTATTAATTTAGTAGTTGGATTGCCAAATCCAGGAACAATGAAAGCAAAAGGGGAGATACAAGGGAAGGAAGTCATAGTGCTTGTAGATTGCGGAGCCACGCATAATTTCATATTACAGAAGTTGGTGAATGAACTGCAGTTGAGGAAAAAGATAGTCATACAAGGAGATCCAAGCCTGACAAAAGCCAGAGTCAGTCTAAAAAGTTTGTTGAAGAATTTGGGGAGTGAAGATCAAAGATTTTTAGTAGAATGTAGATCCTTGGAAAGGAGCGAGTCATGGGAGGAGGAAAATCATATTGAAGAAGAATTGACTGATGAAGAGTCAATAACTGTGATACTTAAGAGGTTTGAGGATGTGTTTGAATGA

Coding sequence (CDS)

ATGGAATCGGCGGCAGATGATCGATCCACAATGAATGAGAAGTTAACCGAATTATCGATGAGGAATTTTCCGATGAAGAGCACAGACAAAGGCGAAGGATCTTCAAAGCGGGAAGAAGAAGATAAGAAGATAAAAAAGAAAACAGATGAGGAAAGTAACAATGATCGCAACGAATTCAAGAAGGTGGAAATGCCGATTTTCAGCGGGGATGATCCATATTCTTGGTTGTTTCGTGCCGAAAGGTATTTTCAAATTCATAAACTTACTGAATCTGAAAAAATGACGGAGAGGTTATTAATCCGATTTCGATCGGTGAGGGAAGAATCTTTATATGGACGATTCTTACGAAGTCAACATAAAACAACGGTAGAAGAGTATAGAAACCTGTTTGATAAATGGGTAGCACCATTATCGGACATGTCGGAGAAGGTGGTAGAAGAAACGTTCATGTCACGGTTGAAACCATGGATTCAGGCAGAGATGGACTTCTGTGAACCAAAAGGCCTGACACAAATGATGAGAATAGCGCAAAAGGTTGAGAATAGAGAAGATATTCGGAGAGAAGTGAATCTTTCGGGATATTTCGGAGTAAAAGCAACTAATTACCATAACAATACGAAGGTTAATGCGAATGCAAATTTGGGAGAAAATAAAGGAGGAATTGGATGGCTGATGAGGACAATTACCTTAAGAGGAACGACAACAGAAGAGGAAGGTGAAGAGTTCGAAATTAAGGAAGAGAGTAGGGATGGACAGAGAGAACTAAACGCCATTGAAATAACTGAAGAAGGTCGTGCAATAGTAGAATTGTCTATTAATTTAGTAGTTGGATTGCCAAATCCAGGAACAATGAAAGCAAAAGGGGAGATACAAGGGAAGGAAGTCATAGTGCTTGTAGATTGCGGAGCCACGCATAATTTCATATTACAGAAGTTGGTGAATGAACTGCAGTTGAGGAAAAAGATAGTCATACAAGGAGATCCAAGCCTGACAAAAGCCAGAGTCAGTCTAAAAAGTTTGTTGAAGAATTTGGGGAGTGAAGATCAAAGATTTTTAGTAGAATGTAGATCCTTGGAAAGGAGCGAGTCATGGGAGGAGGAAAATCATATTGAAGAAGAATTGACTGATGAAGAGTCAATAACTGTGATACTTAAGAGGTTTGAGGATGTGTTTGAATGA

Protein sequence

MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGSSKREEEDKKIKKKTDEESNNDRNEFKKVEMPIFSGDDPYSWLFRAERYFQIHKLTESEKMTERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEKVVEETFMSRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVKATNYHNNTKVNANANLGENKGGIGWLMRTITLRGTTTEEEGEEFEIKEESRDGQRELNAIEITEEGRAIVELSINLVVGLPNPGTMKAKGEIQGKEVIVLVDCGATHNFILQKLVNELQLRKKIVIQGDPSLTKARVSLKSLLKNLGSEDQRFLVECRSLERSESWEEENHIEEELTDEESITVILKRFEDVFE*
Homology
BLAST of CSPI04G18050 vs. ExPASy TrEMBL
Match: A0A5D3BEL2 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00340 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 3.6e-81
Identity = 216/552 (39.13%), Postives = 276/552 (50.00%), Query Frame = 0

Query: 1   MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGSSKREEEDKKIKKKTDEESNNDRNEFK 60
           ME  A +RS   E++ E   +N P   +   + SS R+ E+   KK   +E++NDR++FK
Sbjct: 59  MEMNAKERSMAGERMNESDTQNSPTVKSKNDKASSSRDVEEINTKKNEPDENSNDRSKFK 118

Query: 61  KVEMPIFSGDDPYSWLFRAERYFQIHKLTESEKM-------------------------- 120
           KVEMP+F+G+DP SWLFRAERYFQIHKLTESEKM                          
Sbjct: 119 KVEMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRAQEEREKFVS 178

Query: 121 ----TERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEKVVEETFM 180
                ERLLIRF+S RE + +GRFLR Q +TTVEEYRNLFDK VAPLSD+ ++VVEETFM
Sbjct: 179 WTNLKERLLIRFQSTREGTAFGRFLRIQQETTVEEYRNLFDKLVAPLSDVEDRVVEETFM 238

Query: 181 SRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVK-ATNYHNNTKVN 240
           S L PWI+AE+  C PKGL +MMR AQ VE+RE +R   NL+GY G K +T     TK  
Sbjct: 239 SGLFPWIRAEVILCRPKGLAEMMRTAQLVEDREVLRNAANLNGYIGGKSSTPTSTGTKHY 298

Query: 241 ANANLGENKGGIGWLMRTITLRGTT---TEEEG--------------------------- 300
            +    ENK    + +RTITL+      T +EG                           
Sbjct: 299 YHQQNKENKANAPFPIRTITLKSPNSGETRKEGTSKRLPDAEFQLRREKGLCFKCNEKYS 358

Query: 301 ----------------------EEFEIKEESRDGQRELNAIEITEEGRAIVELSINLVVG 360
                                 EE EI EE+     EL  +E+  +  A VELSIN VVG
Sbjct: 359 ADHKCKMREQRELRMFVVKDNNEELEIVEETETDTAELRTVEVRPQATACVELSINSVVG 418

Query: 361 LPNPGTMKAKGEIQGKEVIVLVDCGATHNFILQKLVNELQL------------------- 393
           L +PGTMK +G +QGKEV++L+DCGATHNF+ +KLV  LQL                   
Sbjct: 419 LNDPGTMKVRGTLQGKEVVILIDCGATHNFVSEKLVTTLQLPIKETAHYGVILGSGTAIQ 478

BLAST of CSPI04G18050 vs. ExPASy TrEMBL
Match: A0A5D3DC20 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00900 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 3.6e-81
Identity = 216/552 (39.13%), Postives = 276/552 (50.00%), Query Frame = 0

Query: 1   MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGSSKREEEDKKIKKKTDEESNNDRNEFK 60
           ME  A +RS   E++ E   +N P   +   + SS R+ E+   KK   +E++NDR++FK
Sbjct: 59  MEMNAKERSMAGERMNESDTQNSPTVKSKNDKASSSRDVEEINTKKNEPDENSNDRSKFK 118

Query: 61  KVEMPIFSGDDPYSWLFRAERYFQIHKLTESEKM-------------------------- 120
           KVEMP+F+G+DP SWLFRAERYFQIHKLTESEKM                          
Sbjct: 119 KVEMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRAQEEREKFVS 178

Query: 121 ----TERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEKVVEETFM 180
                ERLLIRF+S RE + +GRFLR Q +TTVEEYRNLFDK VAPLSD+ ++VVEETFM
Sbjct: 179 WTNLKERLLIRFQSTREGTAFGRFLRIQQETTVEEYRNLFDKLVAPLSDVEDRVVEETFM 238

Query: 181 SRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVK-ATNYHNNTKVN 240
           S L PWI+AE+  C PKGL +MMR AQ VE+RE +R   NL+GY G K +T     TK  
Sbjct: 239 SGLFPWIRAEVILCRPKGLAEMMRTAQLVEDREVLRNAANLNGYIGGKSSTPTSTGTKHY 298

Query: 241 ANANLGENKGGIGWLMRTITLRGTT---TEEEG--------------------------- 300
            +    ENK    + +RTITL+      T +EG                           
Sbjct: 299 YHQQNKENKANAPFPIRTITLKSPNSGETRKEGTSKRLPDAEFQLRREKGLCFKCNEKYS 358

Query: 301 ----------------------EEFEIKEESRDGQRELNAIEITEEGRAIVELSINLVVG 360
                                 EE EI EE+     EL  +E+  +  A VELSIN VVG
Sbjct: 359 ADHKCKMREQRELRMFVVKDNNEELEIVEETETDTAELRTVEVRPQATACVELSINSVVG 418

Query: 361 LPNPGTMKAKGEIQGKEVIVLVDCGATHNFILQKLVNELQL------------------- 393
           L +PGTMK +G +QGKEV++L+DCGATHNF+ +KLV  LQL                   
Sbjct: 419 LNDPGTMKVRGTLQGKEVVILIDCGATHNFVSEKLVTTLQLPIKETAHYGVILGSGTAIQ 478

BLAST of CSPI04G18050 vs. ExPASy TrEMBL
Match: A0A5A7VJA0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001740 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 7.9e-81
Identity = 216/552 (39.13%), Postives = 275/552 (49.82%), Query Frame = 0

Query: 1   MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGSSKREEEDKKIKKKTDEESNNDRNEFK 60
           ME  A +RS   E++ E   +N P   +   + SS R+ E+   KK   +E++NDR++FK
Sbjct: 59  MEMNAKERSMAGERMNESDTQNSPTVKSKNDKASSSRDVEEINTKKNEPDENSNDRSKFK 118

Query: 61  KVEMPIFSGDDPYSWLFRAERYFQIHKLTESEKM-------------------------- 120
           KVEMP+F G+DP SWLFRAERYFQIHKLTESEKM                          
Sbjct: 119 KVEMPVFIGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRAQEEREKFVS 178

Query: 121 ----TERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEKVVEETFM 180
                ERLLIRF+S RE + +GRFLR Q +TTVEEYRNLFDK VAPLSD+ ++VVEETFM
Sbjct: 179 WTNLKERLLIRFQSTREGTAFGRFLRIQQETTVEEYRNLFDKLVAPLSDVEDRVVEETFM 238

Query: 181 SRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVK-ATNYHNNTKVN 240
           S L PWI+AE+  C PKGL +MMR AQ VE+RE +R   NL+GY G K +T     TK  
Sbjct: 239 SGLFPWIRAEVILCRPKGLAEMMRTAQLVEDREVLRNAANLNGYIGGKSSTPTSTGTKHY 298

Query: 241 ANANLGENKGGIGWLMRTITLRGTT---TEEEG--------------------------- 300
            +    ENK    + +RTITL+      T +EG                           
Sbjct: 299 YHQQNKENKANAPFPIRTITLKSPNSGETRKEGTSKRLPDAEFQLRREKGLCFKCNEKYS 358

Query: 301 ----------------------EEFEIKEESRDGQRELNAIEITEEGRAIVELSINLVVG 360
                                 EE EI EE+     EL  +E+  +  A VELSIN VVG
Sbjct: 359 ADHKCKMREQRELRMFVVKDNNEELEIVEETETDTAELRTVEVRPQATACVELSINSVVG 418

Query: 361 LPNPGTMKAKGEIQGKEVIVLVDCGATHNFILQKLVNELQL------------------- 393
           L +PGTMK +G +QGKEV++L+DCGATHNF+ +KLV  LQL                   
Sbjct: 419 LNDPGTMKVRGTLQGKEVVILIDCGATHNFVSEKLVTTLQLPIKETAHYGVILGSGTAIQ 478

BLAST of CSPI04G18050 vs. ExPASy TrEMBL
Match: A0A5A7V5H5 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2406G00250 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 3.9e-80
Identity = 215/552 (38.95%), Postives = 274/552 (49.64%), Query Frame = 0

Query: 1   MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGSSKREEEDKKIKKKTDEESNNDRNEFK 60
           ME  A +RS   E++ E   +N P   +   + SS R+ E+   KK   +E++NDR++FK
Sbjct: 59  MEMNAKERSMAGERMNESDTQNSPTVKSKNDKASSSRDVEEINTKKNEPDENSNDRSKFK 118

Query: 61  KVEMPIFSGDDPYSWLFRAERYFQIHKLTESEKM-------------------------- 120
           KVEMP+F G+DP SWLFRAERYFQIHKLTESEKM                          
Sbjct: 119 KVEMPVFIGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRAQEEREKFVS 178

Query: 121 ----TERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEKVVEETFM 180
                ERLLIRF+S RE + +GRFLR Q +TTVEEYRNLFDK VAPL D+ ++VVEETFM
Sbjct: 179 WTNLKERLLIRFQSTREGTAFGRFLRIQQETTVEEYRNLFDKLVAPLFDVEDRVVEETFM 238

Query: 181 SRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVK-ATNYHNNTKVN 240
           S L PWI+AE+  C PKGL +MMR AQ VE+RE +R   NL+GY G K +T     TK  
Sbjct: 239 SGLFPWIRAEVILCRPKGLAEMMRTAQLVEDREILRNAANLNGYIGGKSSTPTSTGTKHY 298

Query: 241 ANANLGENKGGIGWLMRTITLRGTT---TEEEG--------------------------- 300
            +    ENK    + +RTITL+      T +EG                           
Sbjct: 299 HHQQNKENKANAPFPIRTITLKSPNSGETRKEGTSKRLPDAEFQLRREKGLCFKCNEKYS 358

Query: 301 ----------------------EEFEIKEESRDGQRELNAIEITEEGRAIVELSINLVVG 360
                                 EE EI EE+     EL  +E+  +  A VELSIN VVG
Sbjct: 359 ADHKCKMREQRELRMFVVKDNNEELEIVEETETDTAELRTVEVQPQATACVELSINSVVG 418

Query: 361 LPNPGTMKAKGEIQGKEVIVLVDCGATHNFILQKLVNELQL------------------- 393
           L +PGTMK +G +QGKEV++L+DCGATHNF+ +KLV  LQL                   
Sbjct: 419 LNDPGTMKVRGTLQGKEVVILIDCGATHNFVSEKLVTTLQLPIKETAHYGVILGSGTAIQ 478

BLAST of CSPI04G18050 vs. ExPASy TrEMBL
Match: A0A5A7TAV1 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold190G00200 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 4.3e-79
Identity = 202/498 (40.56%), Postives = 276/498 (55.42%), Query Frame = 0

Query: 1   MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGSSKREEE-------DKKIKKKTDEESN 60
           ME+ A +RS M +K  E S RN         E SS + EE       D+  +K   +E+ 
Sbjct: 59  METNAWERSAMKQKTIETSARNAENDKRKGNEASSSKTEESKQNFGDDRNERKSETDENY 118

Query: 61  NDRNEFKKVEMPIFSGDDPYSWLFRAERYFQIHKLTESEK-------------------- 120
           +DRN+FKKVEM +F+ +DP SWLFRAERYFQIHKLTESEK                    
Sbjct: 119 SDRNKFKKVEMSVFTSEDPDSWLFRAERYFQIHKLTESEKVLVSTVSFDGPALNWFRSQE 178

Query: 121 ----------MTERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEK 180
                     + ERLL+RFR  ++E++  +FLR + ++++EEYRNLFDK VAPLSD+ E+
Sbjct: 179 ERDKFTSRTNLKERLLVRFRLSKDETISAQFLRIKQESSIEEYRNLFDKLVAPLSDLPER 238

Query: 181 VVEETFMSRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVKATNYH 240
           VVE+TFM+ L PWI+AE+ FC PK L +MM +AQ VENRE+  RE NL+GY   K     
Sbjct: 239 VVEDTFMNGLLPWIRAEVAFCRPKSLAEMMEVAQLVENRENFTREANLNGYSDGKNFVQT 298

Query: 241 NNTKVNANANLGENKGGIGWLMRTITLR----------GTTTEEEGEEFEIKE------- 300
              K   N   GE KG   + + TITLR          GT       EF+I++       
Sbjct: 299 LGGKKTTNNTTGETKGNTAFPIITITLRSPAQGENRREGTYKRLSDAEFQIRKKKVTNDQ 358

Query: 301 ---ESRDGQR----ELNAIEITEEGRAIVELSINLVVGLPNPGTMKAKGEIQGKEVIVLV 360
              E  DG+     ELN IE+  +    V+LSIN VVGL +PGTMK +G+++ +EVI+L+
Sbjct: 359 EELEIVDGEEVKKGELNKIEVKGDTTTFVKLSINSVVGLNDPGTMKVRGKLRDEEVIILI 418

Query: 361 DCGATHNFILQKLVNELQLR---------------------------------------- 393
           +CGATHNF+ +KLV +L ++                                        
Sbjct: 419 NCGATHNFVSEKLVKKLLIQIKETAHYGVILGSGPAVQGMQWLHSLGVTTVDWKNLLLTS 478

BLAST of CSPI04G18050 vs. NCBI nr
Match: XP_031745972.1 (uncharacterized protein LOC116406393 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 1.5e-81
Identity = 211/550 (38.36%), Postives = 292/550 (53.09%), Query Frame = 0

Query: 1   MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGS-SKREEEDKKIKKKTDEESNNDRNEF 60
           M+S A +R+T +EKL +   +    + +++GE S S+R E + K ++  DEE  N+R++F
Sbjct: 52  MDSIAKERTTTSEKLADYGAQETGGRKSNEGESSTSRRGENETKERRTEDEEGANERDKF 111

Query: 61  KKVEMPIFSGDDPYSWLFRAERYFQIHKLTESEK-------------------------- 120
           KKVEMP+F+G+DP SWLFRA+RYFQIHKL+++EK                          
Sbjct: 112 KKVEMPVFNGEDPDSWLFRADRYFQIHKLSDAEKVLVATISFEGPALNWYRAQEERDKFT 171

Query: 121 ----MTERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEKVVEETF 180
               + ERLL+RFRS RE S+ G+FLR + +TTVEEYRN FD+ +APL+D+ ++VVEETF
Sbjct: 172 GWHNLKERLLVRFRSSREGSICGQFLRIKQQTTVEEYRNEFDRLMAPLADLQDRVVEETF 231

Query: 181 MSRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVKATNYHNN-TKV 240
           M+ L PWI+AE+ FC+P GL +MM  AQ VENRE IR+E NL+GY   K    +++  + 
Sbjct: 232 MNGLFPWIKAEVVFCKPVGLAEMMHAAQLVENREIIRKEANLNGYAKGKYPPPNSSIIRS 291

Query: 241 NANANLGENKGGIGWLMRTITLRGTTTE-------------------------------- 300
           +A  N  E+KG   + +RT+TLR  T E                                
Sbjct: 292 SAAMNHSEDKGNTIFPIRTVTLRTATGEVKKEGPTKRLPDAEFQARKEKGLCFRCNEKYF 351

Query: 301 ------------------EEGEEFEIKEESRDGQRELNAIEITEEGRAIVELSINLVVGL 360
                             +E EE+EI EE+   + ELN +EI  E +AIVELSIN VVGL
Sbjct: 352 HGHRCKGREQRELRMYVVKEDEEYEIVEEAEWDETELNCVEINPEDQAIVELSINSVVGL 411

Query: 361 PNPGTMKAKGEIQGKEVIVLVDCGATHNFILQKLVNELQL-------------------- 392
            NPGTMK +G+I+ +EVI+L+DCGATHNFI  K+V EL L                    
Sbjct: 412 TNPGTMKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILGSCAAVKG 471

BLAST of CSPI04G18050 vs. NCBI nr
Match: TYJ96875.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK19540.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 312.0 bits (798), Expect = 7.3e-81
Identity = 216/552 (39.13%), Postives = 276/552 (50.00%), Query Frame = 0

Query: 1   MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGSSKREEEDKKIKKKTDEESNNDRNEFK 60
           ME  A +RS   E++ E   +N P   +   + SS R+ E+   KK   +E++NDR++FK
Sbjct: 59  MEMNAKERSMAGERMNESDTQNSPTVKSKNDKASSSRDVEEINTKKNEPDENSNDRSKFK 118

Query: 61  KVEMPIFSGDDPYSWLFRAERYFQIHKLTESEKM-------------------------- 120
           KVEMP+F+G+DP SWLFRAERYFQIHKLTESEKM                          
Sbjct: 119 KVEMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRAQEEREKFVS 178

Query: 121 ----TERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEKVVEETFM 180
                ERLLIRF+S RE + +GRFLR Q +TTVEEYRNLFDK VAPLSD+ ++VVEETFM
Sbjct: 179 WTNLKERLLIRFQSTREGTAFGRFLRIQQETTVEEYRNLFDKLVAPLSDVEDRVVEETFM 238

Query: 181 SRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVK-ATNYHNNTKVN 240
           S L PWI+AE+  C PKGL +MMR AQ VE+RE +R   NL+GY G K +T     TK  
Sbjct: 239 SGLFPWIRAEVILCRPKGLAEMMRTAQLVEDREVLRNAANLNGYIGGKSSTPTSTGTKHY 298

Query: 241 ANANLGENKGGIGWLMRTITLRGTT---TEEEG--------------------------- 300
            +    ENK    + +RTITL+      T +EG                           
Sbjct: 299 YHQQNKENKANAPFPIRTITLKSPNSGETRKEGTSKRLPDAEFQLRREKGLCFKCNEKYS 358

Query: 301 ----------------------EEFEIKEESRDGQRELNAIEITEEGRAIVELSINLVVG 360
                                 EE EI EE+     EL  +E+  +  A VELSIN VVG
Sbjct: 359 ADHKCKMREQRELRMFVVKDNNEELEIVEETETDTAELRTVEVRPQATACVELSINSVVG 418

Query: 361 LPNPGTMKAKGEIQGKEVIVLVDCGATHNFILQKLVNELQL------------------- 393
           L +PGTMK +G +QGKEV++L+DCGATHNF+ +KLV  LQL                   
Sbjct: 419 LNDPGTMKVRGTLQGKEVVILIDCGATHNFVSEKLVTTLQLPIKETAHYGVILGSGTAIQ 478

BLAST of CSPI04G18050 vs. NCBI nr
Match: TYK21115.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 312.0 bits (798), Expect = 7.3e-81
Identity = 216/552 (39.13%), Postives = 276/552 (50.00%), Query Frame = 0

Query: 1   MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGSSKREEEDKKIKKKTDEESNNDRNEFK 60
           ME  A +RS   E++ E   +N P   +   + SS R+ E+   KK   +E++NDR++FK
Sbjct: 59  MEMNAKERSMAGERMNESDTQNSPTVKSKNDKASSSRDVEEINTKKNEPDENSNDRSKFK 118

Query: 61  KVEMPIFSGDDPYSWLFRAERYFQIHKLTESEKM-------------------------- 120
           KVEMP+F+G+DP SWLFRAERYFQIHKLTESEKM                          
Sbjct: 119 KVEMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRAQEEREKFVS 178

Query: 121 ----TERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEKVVEETFM 180
                ERLLIRF+S RE + +GRFLR Q +TTVEEYRNLFDK VAPLSD+ ++VVEETFM
Sbjct: 179 WTNLKERLLIRFQSTREGTAFGRFLRIQQETTVEEYRNLFDKLVAPLSDVEDRVVEETFM 238

Query: 181 SRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVK-ATNYHNNTKVN 240
           S L PWI+AE+  C PKGL +MMR AQ VE+RE +R   NL+GY G K +T     TK  
Sbjct: 239 SGLFPWIRAEVILCRPKGLAEMMRTAQLVEDREVLRNAANLNGYIGGKSSTPTSTGTKHY 298

Query: 241 ANANLGENKGGIGWLMRTITLRGTT---TEEEG--------------------------- 300
            +    ENK    + +RTITL+      T +EG                           
Sbjct: 299 YHQQNKENKANAPFPIRTITLKSPNSGETRKEGTSKRLPDAEFQLRREKGLCFKCNEKYS 358

Query: 301 ----------------------EEFEIKEESRDGQRELNAIEITEEGRAIVELSINLVVG 360
                                 EE EI EE+     EL  +E+  +  A VELSIN VVG
Sbjct: 359 ADHKCKMREQRELRMFVVKDNNEELEIVEETETDTAELRTVEVRPQATACVELSINSVVG 418

Query: 361 LPNPGTMKAKGEIQGKEVIVLVDCGATHNFILQKLVNELQL------------------- 393
           L +PGTMK +G +QGKEV++L+DCGATHNF+ +KLV  LQL                   
Sbjct: 419 LNDPGTMKVRGTLQGKEVVILIDCGATHNFVSEKLVTTLQLPIKETAHYGVILGSGTAIQ 478

BLAST of CSPI04G18050 vs. NCBI nr
Match: KAA0068193.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 310.8 bits (795), Expect = 1.6e-80
Identity = 216/552 (39.13%), Postives = 275/552 (49.82%), Query Frame = 0

Query: 1   MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGSSKREEEDKKIKKKTDEESNNDRNEFK 60
           ME  A +RS   E++ E   +N P   +   + SS R+ E+   KK   +E++NDR++FK
Sbjct: 59  MEMNAKERSMAGERMNESDTQNSPTVKSKNDKASSSRDVEEINTKKNEPDENSNDRSKFK 118

Query: 61  KVEMPIFSGDDPYSWLFRAERYFQIHKLTESEKM-------------------------- 120
           KVEMP+F G+DP SWLFRAERYFQIHKLTESEKM                          
Sbjct: 119 KVEMPVFIGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRAQEEREKFVS 178

Query: 121 ----TERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEKVVEETFM 180
                ERLLIRF+S RE + +GRFLR Q +TTVEEYRNLFDK VAPLSD+ ++VVEETFM
Sbjct: 179 WTNLKERLLIRFQSTREGTAFGRFLRIQQETTVEEYRNLFDKLVAPLSDVEDRVVEETFM 238

Query: 181 SRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVK-ATNYHNNTKVN 240
           S L PWI+AE+  C PKGL +MMR AQ VE+RE +R   NL+GY G K +T     TK  
Sbjct: 239 SGLFPWIRAEVILCRPKGLAEMMRTAQLVEDREVLRNAANLNGYIGGKSSTPTSTGTKHY 298

Query: 241 ANANLGENKGGIGWLMRTITLRGTT---TEEEG--------------------------- 300
            +    ENK    + +RTITL+      T +EG                           
Sbjct: 299 YHQQNKENKANAPFPIRTITLKSPNSGETRKEGTSKRLPDAEFQLRREKGLCFKCNEKYS 358

Query: 301 ----------------------EEFEIKEESRDGQRELNAIEITEEGRAIVELSINLVVG 360
                                 EE EI EE+     EL  +E+  +  A VELSIN VVG
Sbjct: 359 ADHKCKMREQRELRMFVVKDNNEELEIVEETETDTAELRTVEVRPQATACVELSINSVVG 418

Query: 361 LPNPGTMKAKGEIQGKEVIVLVDCGATHNFILQKLVNELQL------------------- 393
           L +PGTMK +G +QGKEV++L+DCGATHNF+ +KLV  LQL                   
Sbjct: 419 LNDPGTMKVRGTLQGKEVVILIDCGATHNFVSEKLVTTLQLPIKETAHYGVILGSGTAIQ 478

BLAST of CSPI04G18050 vs. NCBI nr
Match: KAA0062868.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 308.5 bits (789), Expect = 8.1e-80
Identity = 215/552 (38.95%), Postives = 274/552 (49.64%), Query Frame = 0

Query: 1   MESAADDRSTMNEKLTELSMRNFPMKSTDKGEGSSKREEEDKKIKKKTDEESNNDRNEFK 60
           ME  A +RS   E++ E   +N P   +   + SS R+ E+   KK   +E++NDR++FK
Sbjct: 59  MEMNAKERSMAGERMNESDTQNSPTVKSKNDKASSSRDVEEINTKKNEPDENSNDRSKFK 118

Query: 61  KVEMPIFSGDDPYSWLFRAERYFQIHKLTESEKM-------------------------- 120
           KVEMP+F G+DP SWLFRAERYFQIHKLTESEKM                          
Sbjct: 119 KVEMPVFIGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRAQEEREKFVS 178

Query: 121 ----TERLLIRFRSVREESLYGRFLRSQHKTTVEEYRNLFDKWVAPLSDMSEKVVEETFM 180
                ERLLIRF+S RE + +GRFLR Q +TTVEEYRNLFDK VAPL D+ ++VVEETFM
Sbjct: 179 WTNLKERLLIRFQSTREGTAFGRFLRIQQETTVEEYRNLFDKLVAPLFDVEDRVVEETFM 238

Query: 181 SRLKPWIQAEMDFCEPKGLTQMMRIAQKVENREDIRREVNLSGYFGVK-ATNYHNNTKVN 240
           S L PWI+AE+  C PKGL +MMR AQ VE+RE +R   NL+GY G K +T     TK  
Sbjct: 239 SGLFPWIRAEVILCRPKGLAEMMRTAQLVEDREILRNAANLNGYIGGKSSTPTSTGTKHY 298

Query: 241 ANANLGENKGGIGWLMRTITLRGTT---TEEEG--------------------------- 300
            +    ENK    + +RTITL+      T +EG                           
Sbjct: 299 HHQQNKENKANAPFPIRTITLKSPNSGETRKEGTSKRLPDAEFQLRREKGLCFKCNEKYS 358

Query: 301 ----------------------EEFEIKEESRDGQRELNAIEITEEGRAIVELSINLVVG 360
                                 EE EI EE+     EL  +E+  +  A VELSIN VVG
Sbjct: 359 ADHKCKMREQRELRMFVVKDNNEELEIVEETETDTAELRTVEVQPQATACVELSINSVVG 418

Query: 361 LPNPGTMKAKGEIQGKEVIVLVDCGATHNFILQKLVNELQL------------------- 393
           L +PGTMK +G +QGKEV++L+DCGATHNF+ +KLV  LQL                   
Sbjct: 419 LNDPGTMKVRGTLQGKEVVILIDCGATHNFVSEKLVTTLQLPIKETAHYGVILGSGTAIQ 478

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BEL23.6e-8139.13Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3DC203.6e-8139.13Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5A7VJA07.9e-8139.13Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7V5H53.9e-8038.95Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7TAV14.3e-7940.56Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
Match NameE-valueIdentityDescription
XP_031745972.11.5e-8138.36uncharacterized protein LOC116406393 [Cucumis sativus][more]
TYJ96875.17.3e-8139.13Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK19540.1 Ty3/gyp... [more]
TYK21115.17.3e-8139.13transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa][more]
KAA0068193.11.6e-8039.13Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0062868.18.1e-8038.95Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 278..346
e-value: 2.5E-6
score: 29.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..56
NoneNo IPR availablePANTHERPTHR34482:SF20SUBFAMILY NOT NAMEDcoord: 90..208
coord: 250..319
NoneNo IPR availablePANTHERPTHR34482DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKEcoord: 90..208
coord: 250..319
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 287..322
e-value: 2.37988E-7
score: 46.5608

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G18050.1CSPI04G18050.1mRNA