CSPI04G15820 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G15820
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	30S ribosomal protein S31, chloroplastic
Location	Chr4: 13134758 .. 13135738 (-)
RNA-Seq Expression	CSPI04G15820
Synteny	CSPI04G15820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTCGAAACTTATCTTTGTGATTCTCCCACAAGCGCTACCTCGCTCTGCTTCATCTTCATCCATCCATGGCGTCTCTTCCTTTCGGACTTCTTCAGGCTCCATCTCAATCTCCTCGTTTCTTCTCTTTCTCCAAATGTGAAGCCCTAGGAACATCTCTTCGTGCTTCTTCTACCGCTTCTCTTGCAATCTCTACACCTTCATCTCCTTCTTCAATTCCTGCTAGTATGTGTGTGTTAGCTTCAATTGAAGTATTTACATCGCTTCTGTTCACTTTTCATTGCTTAATTTCTGTTCTGTCTTTACTTTTTTTTCAGTATATTGTGGCAGAGGCGATAAGAAAACGGAGAGAGGAAAGCGGTTCAATCATTCGTATGGAAATGTATGTGTCTATATGTTTTCTTGAGTTTCTGTTTCTGTCTTCCATAAGTTTCTCTATCGTTTTTTATATTTTGAATTTTTTTTCGGGGGGAAAATGTTCAGGCAAGGCCTCGGGACAAGACCAAGGGGAGAGGGACTCCGAGAGTACCAACTCCTCCTTCTCCGCCTAGGAAGGATAAATTTGACGACAATGAGAAAATCAAGATCGAGATTGACGAGTCTCTTTTTGGTAGCTAGTCATAGGTCATCCTAATTCTGTTTATTTGAATGTGTTTTCTTAATTCAGAAGGTACTTCCACTTCTTCTAATAGCATTATTTTTGTATGAATTCTTCAGTCGCTTATCGGCTTCATGAATTTGTTCTTCGTTTTGAGTCAACTCCAAGTACGGCCTCTCTCTCTTTTTCCTTCTATCTTTGTCTTTAACCATTTCTGAGCAAGAGTCTAAGCATCGATGCTTCATAGATAGTCATTGCGTCACTACAGGCGTTTGTTTATGGAATTTAAGTTAACTTCCGCATACATGTTATTCGAAGACTAGAGTTGAGCTATTTAATATTAACGTTAGATATAGAAAGATTCTACCAGCTCCTTGTTGGTTTT

mRNA sequence

ACTCGAAACTTATCTTTGTGATTCTCCCACAAGCGCTACCTCGCTCTGCTTCATCTTCATCCATCCATGGCGTCTCTTCCTTTCGGACTTCTTCAGGCTCCATCTCAATCTCCTCGTTTCTTCTCTTTCTCCAAATGTGAAGCCCTAGGAACATCTCTTCGTGCTTCTTCTACCGCTTCTCTTGCAATCTCTACACCTTCATCTCCTTCTTCAATTCCTGCTATATATTGTGGCAGAGGCGATAAGAAAACGGAGAGAGGAAAGCGGTTCAATCATTCGTATGGAAATGCAAGGCCTCGGGACAAGACCAAGGGGAGAGGGACTCCGAGAGTACCAACTCCTCCTTCTCCGCCTAGGAAGGATAAATTTGACGACAATGAGAAAATCAAGATCGAGATTGACGAGTCTCTTTTTGGTAGCTAGTCATAGGTCATCCTAATTCTGTTTATTTGAATGTGTTTTCTTAATTCAGAAGGTACTTCCACTTCTTCTAATAGCATTATTTTTGTATGAATTCTTCAGTCGCTTATCGGCTTCATGAATTTGTTCTTCGTTTTGAGTCAACTCCAAGTACGGCCTCTCTCTCTTTTTCCTTCTATCTTTGTCTTTAACCATTTCTGAGCAAGAGTCTAAGCATCGATGCTTCATAGATAGTCATTGCGTCACTACAGGCGTTTGTTTATGGAATTTAAGTTAACTTCCGCATACATGTTATTCGAAGACTAGAGTTGAGCTATTTAATATTAACGTTAGATATAGAAAGATTCTACCAGCTCCTTGTTGGTTTT

Coding sequence (CDS)

ATGGCGTCTCTTCCTTTCGGACTTCTTCAGGCTCCATCTCAATCTCCTCGTTTCTTCTCTTTCTCCAAATGTGAAGCCCTAGGAACATCTCTTCGTGCTTCTTCTACCGCTTCTCTTGCAATCTCTACACCTTCATCTCCTTCTTCAATTCCTGCTATATATTGTGGCAGAGGCGATAAGAAAACGGAGAGAGGAAAGCGGTTCAATCATTCGTATGGAAATGCAAGGCCTCGGGACAAGACCAAGGGGAGAGGGACTCCGAGAGTACCAACTCCTCCTTCTCCGCCTAGGAAGGATAAATTTGACGACAATGAGAAAATCAAGATCGAGATTGACGAGTCTCTTTTTGGTAGCTAG

Protein sequence

MASLPFGLLQAPSQSPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS*

Homology

[Close]

BLAST of CSPI04G15820 vs. ExPASy Swiss-Prot
Match: O80439 (30S ribosomal protein S31, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS31 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-26
Identity = 64/99 (64.65%), Postives = 79/99 (79.80%), Query Frame = 0


Query: 20  SFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRD 79
           S S  E  G SL +  T   ++ST SS SSIP +YCGRGD+KT +GKRFNHS+GNARPR+
Sbjct: 22  SSSHSETAGVSL-SCFTHQFSLST-SSSSSIPLVYCGRGDRKTAKGKRFNHSFGNARPRN 81

Query: 80  KTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS 119
           K+KGRG  RVP PP+PPRKDKF+++EKIKI+IDESLF +
Sbjct: 82  KSKGRGPERVPVPPAPPRKDKFENDEKIKIDIDESLFSN 118

[Close]

BLAST of CSPI04G15820 vs. ExPASy Swiss-Prot
Match: P47910 (30S ribosomal protein S31, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS31 PE=1 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-14
Identity = 53/105 (50.48%), Postives = 68/105 (64.76%), Query Frame = 0


Query: 1   MASLPFGLLQAPSQSPR--FFSFSKCEAL-GTSLRASSTASLAISTPSSPSSIPAIYCGR 60
           MASL   LL  PS +     FSFS  +++ G SL +  T SL+ S  +SP ++P IYCGR
Sbjct: 1   MASL---LLGTPSMACHSVSFSFSHSQSVAGVSLSSPPTLSLSSSVSTSP-ALPLIYCGR 60

Query: 61  GDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFD 103
           GD+KT +GKRFNHS+GNARP++K KGRG P+ P  P      K D
Sbjct: 61  GDRKTAKGKRFNHSFGNARPKNKNKGRGPPKAPIFPKGDPSQKED 101

[Close]

BLAST of CSPI04G15820 vs. ExPASy Swiss-Prot
Match: P47909 (30S ribosomal protein S31, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0528100 PE=3 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 3.5e-05
Identity = 30/54 (55.56%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 44 PSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARP-RDKTKGRGTPRVPTPPSPP 97
          P   +   A+ CGRGDKKT+RGKRF  SYGNARP R+K   R   RV  P S P
Sbjct: 21 PVISAEAEAVTCGRGDKKTKRGKRFKGSYGNARPKREKKIERIKDRVEVPRSTP 74

[Close]

BLAST of CSPI04G15820 vs. ExPASy TrEMBL
Match: A0A0A0KXY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308630 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.7e-56
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MASLPFGLLQAPSQSPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDK 60
           MASLPFGLLQAPSQSPRFFSFSK EALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDK
Sbjct: 1   MASLPFGLLQAPSQSPRFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDK 60

Query: 61  KTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS 119
           KTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS
Sbjct: 61  KTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS 118

[Close]

BLAST of CSPI04G15820 vs. ExPASy TrEMBL
Match: A0A5A7TU27 (30S ribosomal protein S31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00930 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.6e-51
Identity = 110/122 (90.16%), Postives = 113/122 (92.62%), Query Frame = 0


Query: 1   MASLPFGLLQAPSQS----PRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCG 60
           M SLPFGLLQAPSQS    P +FSFSK E LGTSLRASSTASLAISTPSSPSSIPA+YCG
Sbjct: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLF 119
           RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDD+EKIKIEIDESLF
Sbjct: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120

[Close]

BLAST of CSPI04G15820 vs. ExPASy TrEMBL
Match: A0A1S3BL51 (30S ribosomal protein S31, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491228 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.6e-51
Identity = 110/122 (90.16%), Postives = 113/122 (92.62%), Query Frame = 0


Query: 1   MASLPFGLLQAPSQS----PRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCG 60
           M SLPFGLLQAPSQS    P +FSFSK E LGTSLRASSTASLAISTPSSPSSIPA+YCG
Sbjct: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLF 119
           RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDD+EKIKIEIDESLF
Sbjct: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120

[Close]

BLAST of CSPI04G15820 vs. ExPASy TrEMBL
Match: A0A6J1DDL3 (30S ribosomal protein S31, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111019400 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 9.5e-46
Identity = 102/120 (85.00%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 1   MASLPFGLLQAPSQ----SPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCG 60
           MASLPFGLLQA SQ    SPRFFSFSK E LGTSLRA STASLA S  SSPSS+PA+YCG
Sbjct: 52  MASLPFGLLQAASQSPTLSPRFFSFSKSETLGTSLRA-STASLATSATSSPSSVPAVYCG 111

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLF 117
           RGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVPTPP+PPRKDKF+D+EKIKIEID+SLF
Sbjct: 112 RGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLF 170

[Close]

BLAST of CSPI04G15820 vs. ExPASy TrEMBL
Match: A0A6J1HRX4 (30S ribosomal protein S31, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466195 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.1e-41
Identity = 96/120 (80.00%), Postives = 102/120 (85.00%), Query Frame = 0


Query: 1   MASLPFGLLQA----PSQSPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCG 60
           MASLPFGLLQA    P+ SPR FSFSK E LGTSLR S+      S  SSPSSIPA+YCG
Sbjct: 1   MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTST----GTSATSSPSSIPAVYCG 60

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLF 117
           RGDKKTE+GKRF HS+GNARPRDKTKGRGTPRVPTPPSPPRKDKFDD+EKIKIEIDESLF
Sbjct: 61  RGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 116

[Close]

BLAST of CSPI04G15820 vs. NCBI nr
Match: XP_004147884.1 (30S ribosomal protein S31, chloroplastic [Cucumis sativus] >KGN54373.1 hypothetical protein Csa_018058 [Cucumis sativus])

HSP 1 Score: 227.6 bits (579), Expect = 5.5e-56
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MASLPFGLLQAPSQSPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDK 60
           MASLPFGLLQAPSQSPRFFSFSK EALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDK
Sbjct: 1   MASLPFGLLQAPSQSPRFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDK 60

Query: 61  KTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS 119
           KTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS
Sbjct: 61  KTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS 118

[Close]

BLAST of CSPI04G15820 vs. NCBI nr
Match: XP_008449316.1 (PREDICTED: 30S ribosomal protein S31, chloroplastic [Cucumis melo] >KAA0045031.1 30S ribosomal protein S31 [Cucumis melo var. makuwa] >TYJ96295.1 30S ribosomal protein S31 [Cucumis melo var. makuwa])

HSP 1 Score: 211.1 bits (536), Expect = 5.3e-51
Identity = 110/122 (90.16%), Postives = 113/122 (92.62%), Query Frame = 0


Query: 1   MASLPFGLLQAPSQS----PRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCG 60
           M SLPFGLLQAPSQS    P +FSFSK E LGTSLRASSTASLAISTPSSPSSIPA+YCG
Sbjct: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLF 119
           RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDD+EKIKIEIDESLF
Sbjct: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120

[Close]

BLAST of CSPI04G15820 vs. NCBI nr
Match: XP_038882305.1 (30S ribosomal protein S31, chloroplastic [Benincasa hispida])

HSP 1 Score: 198.7 bits (504), Expect = 2.7e-47
Identity = 105/122 (86.07%), Postives = 111/122 (90.98%), Query Frame = 0


Query: 1   MASLPFGLLQAPSQ----SPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCG 60
           MASLPFGLLQA SQ    SPRFFSFSK E LGTSLRASSTASLA ST SSPSSIPA+YCG
Sbjct: 1   MASLPFGLLQAASQSPTLSPRFFSFSKSETLGTSLRASSTASLATSTTSSPSSIPAVYCG 60

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLF 119
           RGDKKTE+GKRFN SYGNARPR+KTKGRGTPRVPTPPSPPRKDKF+D+EKIKIEIDESLF
Sbjct: 61  RGDKKTEKGKRFNRSYGNARPRNKTKGRGTPRVPTPPSPPRKDKFEDDEKIKIEIDESLF 120

[Close]

BLAST of CSPI04G15820 vs. NCBI nr
Match: XP_022151467.1 (30S ribosomal protein S31, chloroplastic [Momordica charantia])

HSP 1 Score: 192.6 bits (488), Expect = 2.0e-45
Identity = 102/120 (85.00%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 1   MASLPFGLLQAPSQ----SPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCG 60
           MASLPFGLLQA SQ    SPRFFSFSK E LGTSLRA STASLA S  SSPSS+PA+YCG
Sbjct: 52  MASLPFGLLQAASQSPTLSPRFFSFSKSETLGTSLRA-STASLATSATSSPSSVPAVYCG 111

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLF 117
           RGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVPTPP+PPRKDKF+D+EKIKIEID+SLF
Sbjct: 112 RGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLF 170

[Close]

BLAST of CSPI04G15820 vs. NCBI nr
Match: XP_023517799.1 (30S ribosomal protein S31, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181.0 bits (458), Expect = 5.9e-42
Identity = 97/120 (80.83%), Postives = 103/120 (85.83%), Query Frame = 0


Query: 1   MASLPFGLLQA----PSQSPRFFSFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCG 60
           MASLPFGLLQA    P+ SPR FSFSK E LGTSLR S+     IS  SSPSSIPA+YCG
Sbjct: 1   MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTST----GISATSSPSSIPAVYCG 60

Query: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLF 117
           RGDKKTE+GKRF HS+GNARPRDKTKGRGTPRVPTPPSPPRKDKFDD+EKIKIEIDESLF
Sbjct: 61  RGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 116

[Close]

BLAST of CSPI04G15820 vs. TAIR 10
Match: AT2G38140.1 (plastid-specific ribosomal protein 4 )

HSP 1 Score: 119.8 bits (299), Expect = 1.5e-27
Identity = 64/99 (64.65%), Postives = 79/99 (79.80%), Query Frame = 0


Query: 20  SFSKCEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRD 79
           S S  E  G SL +  T   ++ST SS SSIP +YCGRGD+KT +GKRFNHS+GNARPR+
Sbjct: 22  SSSHSETAGVSL-SCFTHQFSLST-SSSSSIPLVYCGRGDRKTAKGKRFNHSFGNARPRN 81

Query: 80  KTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS 119
           K+KGRG  RVP PP+PPRKDKF+++EKIKI+IDESLF +
Sbjct: 82  KSKGRGPERVPVPPAPPRKDKFENDEKIKIDIDESLFSN 118

The following BLAST results are available for this feature:

BLAST of CSPI04G15820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80439	2.1e-26	64.65	30S ribosomal protein S31, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS3...	[more]
P47910	1.4e-14	50.48	30S ribosomal protein S31, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS31 P...	[more]
P47909	3.5e-05	55.56	30S ribosomal protein S31, mitochondrial OS=Oryza sativa subsp. japonica OX=3994...	[more]

BLAST of CSPI04G15820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXY4	2.7e-56	99.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308630 PE=3 SV=1	[more]
A0A5A7TU27	2.6e-51	90.16	30S ribosomal protein S31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BL51	2.6e-51	90.16	30S ribosomal protein S31, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491228...	[more]
A0A6J1DDL3	9.5e-46	85.00	30S ribosomal protein S31, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1HRX4	1.1e-41	80.00	30S ribosomal protein S31, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11146...	[more]

BLAST of CSPI04G15820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147884.1	5.5e-56	99.15	30S ribosomal protein S31, chloroplastic [Cucumis sativus] >KGN54373.1 hypotheti...	[more]
XP_008449316.1	5.3e-51	90.16	PREDICTED: 30S ribosomal protein S31, chloroplastic [Cucumis melo] >KAA0045031.1...	[more]
XP_038882305.1	2.7e-47	86.07	30S ribosomal protein S31, chloroplastic [Benincasa hispida]	[more]
XP_022151467.1	2.0e-45	85.00	30S ribosomal protein S31, chloroplastic [Momordica charantia]	[more]
XP_023517799.1	5.9e-42	80.83	30S ribosomal protein S31, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI04G15820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38140.1	1.5e-27	64.65	plastid-specific ribosomal protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR030826	30S ribosomal protein	PFAM	PF17067	RPS31	coord: 19..99 e-value: 6.9E-29 score: 99.9
IPR030826	30S ribosomal protein	TIGRFAM	TIGR04560	TIGR04560	coord: 56..80 e-value: 6.2E-11 score: 40.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..50
None	No IPR available	PANTHER	PTHR34550:SF2	30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC	coord: 1..116
IPR044695	30S ribosomal protein S31, plant	PANTHER	PTHR34550	30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC	coord: 1..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G15820.1	CSPI04G15820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032544	plastid translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding