CSPI04G15750 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G15750
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	Chr4: 13096953 .. 13098597 (+)
RNA-Seq Expression	CSPI04G15750
Synteny	CSPI04G15750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGGGATAAGGGCAGAGGTCACAGAAGCCATCAGATGGATTCGTCCCACAATCCAACGGACAAAAAACCACAACAATCAGATTATGTGGCAATCGCCGATCACACTTCCCCTTTCTCAACCACATAATAACCCAACCAAAATCCCCAATTTCCCATCTCACATTCTCCAATCCCTCACTCAAACTCCTCCTAATGGCCACCGCCGCCGCAACCTCCTCCTTCCTCGGTACACGCCTCGCCGAAATAGTCCCCAGTTCTGGCAGAGTCCAAGCCCGGTTCGGCTTTGGAAAGAAAAAGAGTCCGCCGAAGAAATCGCCGTCGTCTAAGGTGATTTCCGACCGGCCCCTGTGGTTTCCAGGAGCCAAGGCCCCGGAATGGCTGGACGGAAGCTTGGTAGGGGACTATGGATTTGATCCATTTGGGTTGGGGAAACCGGCGGAGTATTTGCAGTATGATTTGGACTCGTTGGATCAAAATTTGGCCAAGAATGTGGCCGGAGATATAATTGGGACAAGATTTGAGAGCGCGGAAGTGAAATCGACGCCGTTTCAGCCGTACACGGAGGTATTTGGATTGCAGAGATTCCGTGAGTGTGAGCTTATTCATGGACGGTGGGCAATGCTGGCTACACTCGGTGCTCTCTCTGTTGAATGGCTCACCGGTGTTACTTGGCAAGACGCCGGAAAAGTGAGTATATTTTCGTCACTGATTTCCTTTTATTTATTTATTTATTTATATACCGACAGTCTTGCATTATATTTAGTTGTGGACTGTTCATTTGATTTAAAGAAATAATTTGATATTCTTTTTGTTGACTATGAACTAAAAATTTCATAATACACAACAATGACATCGTTACCTATTGAAAGTTTTAAGTTCAAATGTAAAGATCTATTAAATACGTTCCAAAGTTCATAAGATCTAATATCATATACATACTTTGAACGATTAATGATGAGTTGATCATGTACTAATCATTTCAGGTAGAATTAGTGGAAGGTTCATCGTACCTAGGCCAACCACTTCCCTTCTCCATCACTACACTAATCTGGATCGAAGTTCTAGTGATCGGCTACATTGAGTTCCAAAGGAATGCGGAGCTGGACCCGGAGAAAAGGTTGTACCCAGGAGGCAAGTTTTTCGACCCTCTGGGGTTGGCTGAGGACCCAGAAAAGAAAGCAGTGCTACAATTGGCTGAGATCAAGCATGCTCGCCTAGCCATGGTTGCGTTCCTTGGGTTTGCGGTTCAAGCTGCTGTGACTGGCAAAGGTCCACTCAACAACTGGGCTACCCATCTCAGTGACCCTCTCCACACCACTATTATTGACAACTTCTCTTCTTAAGGCTCCTCTTAATTGTCTCCTCCATTACTCGTCTTCTTCATTATTGTCTCTTTCCAGTTTGTATAAAACTTGACTGAGTTATGTGATCCTGAGCTGTAAGTAGTACTTTGCTTCGCGATTCCTATGTTAAATTATATTATATATGGTGTTACGACACAAATCAAAAACCGTTCTTTATTTCATTCCGATTGGTTTTGAATCATTCTTGAGGTGATTTTATATTGCCTAAAATTTTGTGGTTTCAATTGGGGAAGATGAATTGGAAAATAAAGTTATGGTACAATCAAAGTTTTTAATGGTCA

mRNA sequence

CGGGGATAAGGGCAGAGGTCACAGAAGCCATCAGATGGATTCGTCCCACAATCCAACGGACAAAAAACCACAACAATCAGATTATGTGGCAATCGCCGATCACACTTCCCCTTTCTCAACCACATAATAACCCAACCAAAATCCCCAATTTCCCATCTCACATTCTCCAATCCCTCACTCAAACTCCTCCTAATGGCCACCGCCGCCGCAACCTCCTCCTTCCTCGGTACACGCCTCGCCGAAATAGTCCCCAGTTCTGGCAGAGTCCAAGCCCGGTTCGGCTTTGGAAAGAAAAAGAGTCCGCCGAAGAAATCGCCGTCGTCTAAGGTGATTTCCGACCGGCCCCTGTGGTTTCCAGGAGCCAAGGCCCCGGAATGGCTGGACGGAAGCTTGGTAGGGGACTATGGATTTGATCCATTTGGGTTGGGGAAACCGGCGGAGTATTTGCAGTATGATTTGGACTCGTTGGATCAAAATTTGGCCAAGAATGTGGCCGGAGATATAATTGGGACAAGATTTGAGAGCGCGGAAGTGAAATCGACGCCGTTTCAGCCGTACACGGAGGTATTTGGATTGCAGAGATTCCGTGAGTGTGAGCTTATTCATGGACGGTGGGCAATGCTGGCTACACTCGGTGCTCTCTCTGTTGAATGGCTCACCGGTGTTACTTGGCAAGACGCCGGAAAAGTAGAATTAGTGGAAGGTTCATCGTACCTAGGCCAACCACTTCCCTTCTCCATCACTACACTAATCTGGATCGAAGTTCTAGTGATCGGCTACATTGAGTTCCAAAGGAATGCGGAGCTGGACCCGGAGAAAAGGTTGTACCCAGGAGGCAAGTTTTTCGACCCTCTGGGGTTGGCTGAGGACCCAGAAAAGAAAGCAGTGCTACAATTGGCTGAGATCAAGCATGCTCGCCTAGCCATGGTTGCGTTCCTTGGGTTTGCGGTTCAAGCTGCTGTGACTGGCAAAGGTCCACTCAACAACTGGGCTACCCATCTCAGTGACCCTCTCCACACCACTATTATTGACAACTTCTCTTCTTAAGGCTCCTCTTAATTGTCTCCTCCATTACTCGTCTTCTTCATTATTGTCTCTTTCCAGTTTGTATAAAACTTGACTGAGTTATGTGATCCTGAGCTGTAAGTAGTACTTTGCTTCGCGATTCCTATGTTAAATTATATTATATATGGTGTTACGACACAAATCAAAAACCGTTCTTTATTTCATTCCGATTGGTTTTGAATCATTCTTGAGGTGATTTTATATTGCCTAAAATTTTGTGGTTTCAATTGGGGAAGATGAATTGGAAAATAAAGTTATGGTACAATCAAAGTTTTTAATGGTCA

Coding sequence (CDS)

ATGGCCACCGCCGCCGCAACCTCCTCCTTCCTCGGTACACGCCTCGCCGAAATAGTCCCCAGTTCTGGCAGAGTCCAAGCCCGGTTCGGCTTTGGAAAGAAAAAGAGTCCGCCGAAGAAATCGCCGTCGTCTAAGGTGATTTCCGACCGGCCCCTGTGGTTTCCAGGAGCCAAGGCCCCGGAATGGCTGGACGGAAGCTTGGTAGGGGACTATGGATTTGATCCATTTGGGTTGGGGAAACCGGCGGAGTATTTGCAGTATGATTTGGACTCGTTGGATCAAAATTTGGCCAAGAATGTGGCCGGAGATATAATTGGGACAAGATTTGAGAGCGCGGAAGTGAAATCGACGCCGTTTCAGCCGTACACGGAGGTATTTGGATTGCAGAGATTCCGTGAGTGTGAGCTTATTCATGGACGGTGGGCAATGCTGGCTACACTCGGTGCTCTCTCTGTTGAATGGCTCACCGGTGTTACTTGGCAAGACGCCGGAAAAGTAGAATTAGTGGAAGGTTCATCGTACCTAGGCCAACCACTTCCCTTCTCCATCACTACACTAATCTGGATCGAAGTTCTAGTGATCGGCTACATTGAGTTCCAAAGGAATGCGGAGCTGGACCCGGAGAAAAGGTTGTACCCAGGAGGCAAGTTTTTCGACCCTCTGGGGTTGGCTGAGGACCCAGAAAAGAAAGCAGTGCTACAATTGGCTGAGATCAAGCATGCTCGCCTAGCCATGGTTGCGTTCCTTGGGTTTGCGGTTCAAGCTGCTGTGACTGGCAAAGGTCCACTCAACAACTGGGCTACCCATCTCAGTGACCCTCTCCACACCACTATTATTGACAACTTCTCTTCTTAA

Protein sequence

MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS*

Homology

[Close]

BLAST of CSPI04G15750 vs. ExPASy Swiss-Prot
Match: Q07473 (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB4.1 PE=1 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 6.9e-140
Identity = 242/284 (85.21%), Postives = 259/284 (91.20%), Query Frame = 0


Query: 2   ATAAATSSFLGTRLAE-IVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAP 61
           A AAA SS +GTR+A  I P SGR  A FGFGKKK+ PKKS    V +DRPLW+PGA +P
Sbjct: 6   AAAAAASSIMGTRVAPGIHPGSGRFTAVFGFGKKKAAPKKSAKKTVTTDRPLWYPGAISP 65

Query: 62  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 121
           +WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQNLAKN+AGD+IGTR E+A+ KSTPFQ
Sbjct: 66  DWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQ 125

Query: 122 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 181
           PY+EVFG+QRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELV+GSSYLGQPLP
Sbjct: 126 PYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYLGQPLP 185

Query: 182 FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 241
           FSI+TLIWIEVLVIGYIEFQRNAELD EKRLYPGGKFFDPLGLA DPEK A LQLAEIKH
Sbjct: 186 FSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKH 245

Query: 242 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           ARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Sbjct: 246 ARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 289

[Close]

BLAST of CSPI04G15750 vs. ExPASy Swiss-Prot
Match: Q9XF88 (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB4.2 PE=1 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 2.1e-136
Identity = 238/284 (83.80%), Postives = 260/284 (91.55%), Query Frame = 0


Query: 2   ATAAATSSFLGTR-LAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAP 61
           +TAAA SS +GTR +++I  +S R  ARFGFG KK+ PKK+ +  VISDRPLWFPGAK+P
Sbjct: 5   STAAAASSIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKT--VISDRPLWFPGAKSP 64

Query: 62  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 121
           E+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+ G++IGTR E+ + KSTPFQ
Sbjct: 65  EYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQ 124

Query: 122 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 181
           PY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKVELV+GSSYLGQPLP
Sbjct: 125 PYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLGQPLP 184

Query: 182 FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 241
           FSI+TLIWIEVLVIGYIEFQRNAELD EKRLYPGGKFFDPLGLA DP KKA LQLAEIKH
Sbjct: 185 FSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKH 244

Query: 242 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           ARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Sbjct: 245 ARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 286

[Close]

BLAST of CSPI04G15750 vs. ExPASy Swiss-Prot
Match: Q9S7W1 (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB4.3 PE=2 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 1.1e-113
Identity = 205/270 (75.93%), Postives = 228/270 (84.44%), Query Frame = 0


Query: 3   TAAATSSFLGTRLAEIVPSSGRVQARFG--FGKKK--SPPKKSPSSKVISDRPLWFPGAK 62
           TAAA S   G R+ +  P +GRVQARFG  FGKKK   PPKKS   +   DR +WFPGA 
Sbjct: 5   TAAAASGIFGIRIQDPRPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWFPGAN 64

Query: 63  APEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTP 122
            PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAKNVAGDIIG   ES+E+K TP
Sbjct: 65  PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124

Query: 123 FQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQP 182
           FQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVELVEGSSYLGQP
Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEGSSYLGQP 184

Query: 183 LPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEI 242
           LPFS+TTLIWIEVLV+GYIEFQRN+ELDPEKR+YPGG +FDPLGLA DPEK   L+LAEI
Sbjct: 185 LPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGG-YFDPLGLAADPEKLDTLKLAEI 244

Query: 243 KHARLAMVAFLGFAVQAAVTGKGPLNNWAT 269
           KH+RLAMVAFL FA+QAA TGKGP++  AT
Sbjct: 245 KHSRLAMVAFLIFALQAAFTGKGPVSFLAT 273

[Close]

BLAST of CSPI04G15750 vs. ExPASy Swiss-Prot
Match: Q93WD2 (Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii OX=3055 GN=Lhcb4 PE=1 SV=3)

HSP 1 Score: 250.4 bits (638), Expect = 2.5e-65
Identity = 132/225 (58.67%), Postives = 157/225 (69.78%), Query Frame = 0


Query: 52  LWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFES 111
           LW P    PEWLDGSL GD GFDP GL KP+E++   +D  DQN AKN  G +       
Sbjct: 52  LWLPNTTRPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSV------E 111

Query: 112 AEVKSTP--------FQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDA 171
           A V++TP          PY+EVFGL RFRECELIHGRWAMLA LGAL  E  TGV+W +A
Sbjct: 112 AIVQATPDEVSSENRLAPYSEVFGLARFRECELIHGRWAMLACLGALVAEATTGVSWVEA 171

Query: 172 GKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGL 231
           GKVEL +G+SY G  LPFSIT LIWIEV+++G  EF RN+E +PEKR YPGG  FDPL L
Sbjct: 172 GKVEL-DGASYAGLSLPFSITQLIWIEVILVGGAEFYRNSETNPEKRCYPGG-VFDPLKL 231

Query: 232 AEDPEKKAV-LQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWA 268
           A + E++A  L+ AEIKHARLAMV+F G+ VQA  TG+G L + A
Sbjct: 232 ASEDEERAFRLKTAEIKHARLAMVSFFGYGVQALSTGEGALGSLA 268

[Close]

BLAST of CSPI04G15750 vs. ExPASy Swiss-Prot
Match: Q01667 (Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA1 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 8.9e-39
Identity = 97/233 (41.63%), Postives = 128/233 (54.94%), Query Frame = 0


Query: 53  WFPGAKAPEWLDGSLVGDYGFDPFGLGK-PAEYLQYDLDSLDQNLAKNVAGDIIGTRFES 112
           W PG   P +LDGS  GD+GFDP GLG+ PA                             
Sbjct: 48  WMPGEPRPAYLDGSAPGDFGFDPLGLGEVPA----------------------------- 107

Query: 113 AEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEG 172
                           L+R++E ELIH RWAMLA  G L  E L    W  A +   + G
Sbjct: 108 ---------------NLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWAALPG 167

Query: 173 --SSYLGQPLPF-SITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPE 232
             ++YLG P+P+ ++ T++ IE L I ++E QR+ E DPEK+ YPGG  FDPLG ++DP+
Sbjct: 168 GQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPK 227

Query: 233 KKAVLQLAEIKHARLAMVAFLGFAV-QAAVTGKGPLNNWATHLSDPLHTTIID 281
           K   L++ EIK+ RLA++AF+GF V Q+A  G GPL N ATHL+DP H  I D
Sbjct: 228 KLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD 235

[Close]

BLAST of CSPI04G15750 vs. ExPASy TrEMBL
Match: A0A0A0KXI3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_4G308550 PE=3 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 1.5e-161
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAP 60
           MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAP
Sbjct: 1   MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAP 60

Query: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120
           EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ
Sbjct: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120

Query: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180
           PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP
Sbjct: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180

Query: 181 FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240
           FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH
Sbjct: 181 FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240

Query: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of CSPI04G15750 vs. ExPASy TrEMBL
Match: A0A5D3BBB3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00840 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 2.8e-160
Identity = 281/284 (98.94%), Postives = 283/284 (99.65%), Query Frame = 0


Query: 1   MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAP 60
           MATAAATSSF+GTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSK ISDRPLWFPGAKAP
Sbjct: 1   MATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP 60

Query: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120
           EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ
Sbjct: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120

Query: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180
           PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP
Sbjct: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180

Query: 181 FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240
           FS+TTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH
Sbjct: 181 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240

Query: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of CSPI04G15750 vs. ExPASy TrEMBL
Match: A0A1S3BMH8 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491174 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 2.8e-160
Identity = 281/284 (98.94%), Postives = 283/284 (99.65%), Query Frame = 0


Query: 1   MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAP 60
           MATAAATSSF+GTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSK ISDRPLWFPGAKAP
Sbjct: 1   MATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP 60

Query: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120
           EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ
Sbjct: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120

Query: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180
           PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP
Sbjct: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180

Query: 181 FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240
           FS+TTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH
Sbjct: 181 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240

Query: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of CSPI04G15750 vs. ExPASy TrEMBL
Match: A0A6J1IPG0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111478268 PE=3 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 6.6e-154
Identity = 268/283 (94.70%), Postives = 278/283 (98.23%), Query Frame = 0


Query: 2   ATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPE 61
           ATAAATSSF+GTRL ++ PSSGRVQARFGFGKKK+P KKSPSSK ISDRPLWFPGAKAPE
Sbjct: 4   ATAAATSSFIGTRLVDVRPSSGRVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPE 63

Query: 62  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQP 121
           WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFE+A+VKSTPFQP
Sbjct: 64  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFENADVKSTPFQP 123

Query: 122 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 181
           Y+EVFGLQRFRECELIHGRWAMLATLGAL+VE LTG+TWQDAGKVELVEGSSYLGQPLPF
Sbjct: 124 YSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPF 183

Query: 182 SITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 241
           S+TTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA
Sbjct: 184 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 243

Query: 242 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 244 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 286

[Close]

BLAST of CSPI04G15750 vs. ExPASy TrEMBL
Match: A0A6J1GFC4 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111453669 PE=3 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 1.5e-153
Identity = 268/283 (94.70%), Postives = 277/283 (97.88%), Query Frame = 0


Query: 2   ATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPE 61
           ATAAATSSF+GTRL ++ PSS RVQARFGFGKKK+P KKSPSSK ISDRPLWFPGAKAPE
Sbjct: 4   ATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPE 63

Query: 62  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQP 121
           WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESA+VKSTPFQP
Sbjct: 64  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESADVKSTPFQP 123

Query: 122 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 181
           Y+EVFGLQRFRECELIHGRWAMLATLGAL+VE LTG+TWQDAGKVELVEGSSYLGQPLPF
Sbjct: 124 YSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPF 183

Query: 182 SITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 241
           S+TTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA
Sbjct: 184 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 243

Query: 242 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 244 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 286

[Close]

BLAST of CSPI04G15750 vs. NCBI nr
Match: XP_004147887.1 (chlorophyll a-b binding protein CP29.1, chloroplastic [Cucumis sativus] >KGN54365.1 hypothetical protein Csa_017948 [Cucumis sativus])

HSP 1 Score: 578.6 bits (1490), Expect = 3.0e-161
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAP 60
           MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAP
Sbjct: 1   MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAP 60

Query: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120
           EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ
Sbjct: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120

Query: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180
           PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP
Sbjct: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180

Query: 181 FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240
           FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH
Sbjct: 181 FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240

Query: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of CSPI04G15750 vs. NCBI nr
Match: XP_008449241.1 (PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucumis melo] >KAA0045037.1 chlorophyll a-b binding protein CP29.1 [Cucumis melo var. makuwa] >TYJ96289.1 chlorophyll a-b binding protein CP29.1 [Cucumis melo var. makuwa])

HSP 1 Score: 574.3 bits (1479), Expect = 5.7e-160
Identity = 281/284 (98.94%), Postives = 283/284 (99.65%), Query Frame = 0


Query: 1   MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAP 60
           MATAAATSSF+GTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSK ISDRPLWFPGAKAP
Sbjct: 1   MATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP 60

Query: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120
           EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ
Sbjct: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120

Query: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180
           PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP
Sbjct: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180

Query: 181 FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240
           FS+TTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH
Sbjct: 181 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240

Query: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of CSPI04G15750 vs. NCBI nr
Match: XP_038882769.1 (chlorophyll a-b binding protein CP29.1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 569.3 bits (1466), Expect = 1.8e-158
Identity = 278/284 (97.89%), Postives = 280/284 (98.59%), Query Frame = 0


Query: 1   MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAP 60
           MATAAATSSF+GTRLAE+ P SGRVQARFGFGKKKSPPKKSPSSK ISDRPLWFPGAKAP
Sbjct: 1   MATAAATSSFIGTRLAELRPCSGRVQARFGFGKKKSPPKKSPSSKTISDRPLWFPGAKAP 60

Query: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120
           EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ
Sbjct: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120

Query: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180
           PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP
Sbjct: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180

Query: 181 FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240
           FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKK VLQLAEIKH
Sbjct: 181 FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKH 240

Query: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of CSPI04G15750 vs. NCBI nr
Match: XP_022978220.1 (chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 553.1 bits (1424), Expect = 1.4e-153
Identity = 268/283 (94.70%), Postives = 278/283 (98.23%), Query Frame = 0


Query: 2   ATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPE 61
           ATAAATSSF+GTRL ++ PSSGRVQARFGFGKKK+P KKSPSSK ISDRPLWFPGAKAPE
Sbjct: 4   ATAAATSSFIGTRLVDVRPSSGRVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPE 63

Query: 62  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQP 121
           WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFE+A+VKSTPFQP
Sbjct: 64  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFENADVKSTPFQP 123

Query: 122 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 181
           Y+EVFGLQRFRECELIHGRWAMLATLGAL+VE LTG+TWQDAGKVELVEGSSYLGQPLPF
Sbjct: 124 YSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPF 183

Query: 182 SITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 241
           S+TTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA
Sbjct: 184 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 243

Query: 242 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 244 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 286

[Close]

BLAST of CSPI04G15750 vs. NCBI nr
Match: XP_022950626.1 (chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 552.0 bits (1421), Expect = 3.1e-153
Identity = 268/283 (94.70%), Postives = 277/283 (97.88%), Query Frame = 0


Query: 2   ATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPE 61
           ATAAATSSF+GTRL ++ PSS RVQARFGFGKKK+P KKSPSSK ISDRPLWFPGAKAPE
Sbjct: 4   ATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPE 63

Query: 62  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQP 121
           WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESA+VKSTPFQP
Sbjct: 64  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESADVKSTPFQP 123

Query: 122 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 181
           Y+EVFGLQRFRECELIHGRWAMLATLGAL+VE LTG+TWQDAGKVELVEGSSYLGQPLPF
Sbjct: 124 YSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPF 183

Query: 182 SITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 241
           S+TTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA
Sbjct: 184 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 243

Query: 242 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 244 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 286

[Close]

BLAST of CSPI04G15750 vs. TAIR 10
Match: AT5G01530.1 (light harvesting complex photosystem II )

HSP 1 Score: 498.0 bits (1281), Expect = 4.9e-141
Identity = 242/284 (85.21%), Postives = 259/284 (91.20%), Query Frame = 0


Query: 2   ATAAATSSFLGTRLAE-IVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAP 61
           A AAA SS +GTR+A  I P SGR  A FGFGKKK+ PKKS    V +DRPLW+PGA +P
Sbjct: 6   AAAAAASSIMGTRVAPGIHPGSGRFTAVFGFGKKKAAPKKSAKKTVTTDRPLWYPGAISP 65

Query: 62  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 121
           +WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQNLAKN+AGD+IGTR E+A+ KSTPFQ
Sbjct: 66  DWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQ 125

Query: 122 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 181
           PY+EVFG+QRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELV+GSSYLGQPLP
Sbjct: 126 PYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYLGQPLP 185

Query: 182 FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 241
           FSI+TLIWIEVLVIGYIEFQRNAELD EKRLYPGGKFFDPLGLA DPEK A LQLAEIKH
Sbjct: 186 FSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKH 245

Query: 242 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           ARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Sbjct: 246 ARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 289

[Close]

BLAST of CSPI04G15750 vs. TAIR 10
Match: AT3G08940.2 (light harvesting complex photosystem II )

HSP 1 Score: 486.5 bits (1251), Expect = 1.5e-137
Identity = 238/284 (83.80%), Postives = 260/284 (91.55%), Query Frame = 0


Query: 2   ATAAATSSFLGTR-LAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAP 61
           +TAAA SS +GTR +++I  +S R  ARFGFG KK+ PKK+ +  VISDRPLWFPGAK+P
Sbjct: 5   STAAAASSIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKT--VISDRPLWFPGAKSP 64

Query: 62  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 121
           E+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+ G++IGTR E+ + KSTPFQ
Sbjct: 65  EYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQ 124

Query: 122 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 181
           PY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKVELV+GSSYLGQPLP
Sbjct: 125 PYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLGQPLP 184

Query: 182 FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 241
           FSI+TLIWIEVLVIGYIEFQRNAELD EKRLYPGGKFFDPLGLA DP KKA LQLAEIKH
Sbjct: 185 FSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKH 244

Query: 242 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           ARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Sbjct: 245 ARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 286

[Close]

BLAST of CSPI04G15750 vs. TAIR 10
Match: AT2G40100.1 (light harvesting complex photosystem II )

HSP 1 Score: 411.0 bits (1055), Expect = 7.8e-115
Identity = 205/270 (75.93%), Postives = 228/270 (84.44%), Query Frame = 0


Query: 3   TAAATSSFLGTRLAEIVPSSGRVQARFG--FGKKK--SPPKKSPSSKVISDRPLWFPGAK 62
           TAAA S   G R+ +  P +GRVQARFG  FGKKK   PPKKS   +   DR +WFPGA 
Sbjct: 5   TAAAASGIFGIRIQDPRPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWFPGAN 64

Query: 63  APEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTP 122
            PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAKNVAGDIIG   ES+E+K TP
Sbjct: 65  PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124

Query: 123 FQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQP 182
           FQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVELVEGSSYLGQP
Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEGSSYLGQP 184

Query: 183 LPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEI 242
           LPFS+TTLIWIEVLV+GYIEFQRN+ELDPEKR+YPGG +FDPLGLA DPEK   L+LAEI
Sbjct: 185 LPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGG-YFDPLGLAADPEKLDTLKLAEI 244

Query: 243 KHARLAMVAFLGFAVQAAVTGKGPLNNWAT 269
           KH+RLAMVAFL FA+QAA TGKGP++  AT
Sbjct: 245 KHSRLAMVAFLIFALQAAFTGKGPVSFLAT 273

[Close]

BLAST of CSPI04G15750 vs. TAIR 10
Match: AT3G08940.1 (light harvesting complex photosystem II )

HSP 1 Score: 270.0 bits (689), Expect = 2.2e-72
Identity = 134/181 (74.03%), Postives = 155/181 (85.64%), Query Frame = 0


Query: 2   ATAAATSSFLGTR-LAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAP 61
           +TAAA SS +GTR +++I  +S R  ARFGFG KK+ PKK+ +  VISDRPLWFPGAK+P
Sbjct: 5   STAAAASSIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKT--VISDRPLWFPGAKSP 64

Query: 62  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 121
           E+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+ G++IGTR E+ + KSTPFQ
Sbjct: 65  EYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQ 124

Query: 122 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 181
           PY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKV  +  SS L   L 
Sbjct: 125 PYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVSPLFFSSLLRLCLA 183

[Close]

BLAST of CSPI04G15750 vs. TAIR 10
Match: AT2G40100.2 (light harvesting complex photosystem II )

HSP 1 Score: 250.0 bits (637), Expect = 2.3e-66
Identity = 123/169 (72.78%), Postives = 136/169 (80.47%), Query Frame = 0


Query: 3   TAAATSSFLGTRLAEIVPSSGRVQARFG--FGKKK--SPPKKSPSSKVISDRPLWFPGAK 62
           TAAA S   G R+ +  P +GRVQARFG  FGKKK   PPKKS   +   DR +WFPGA 
Sbjct: 5   TAAAASGIFGIRIQDPRPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWFPGAN 64

Query: 63  APEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTP 122
            PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAKNVAGDIIG   ES+E+K TP
Sbjct: 65  PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124

Query: 123 FQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVE 168
           FQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVE
Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVE 173

The following BLAST results are available for this feature:

BLAST of CSPI04G15750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q07473	6.9e-140	85.21	Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q9XF88	2.1e-136	83.80	Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q9S7W1	1.1e-113	75.93	Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q93WD2	2.5e-65	58.67	Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii OX=3055 GN=Lhc...	[more]
Q01667	8.9e-39	41.63	Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of CSPI04G15750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXI3	1.5e-161	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A5D3BBB3	2.8e-160	98.94	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BMH8	2.8e-160	98.94	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1IPG0	6.6e-154	94.70	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1GFC4	1.5e-153	94.70	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of CSPI04G15750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147887.1	3.0e-161	100.00	chlorophyll a-b binding protein CP29.1, chloroplastic [Cucumis sativus] >KGN5436...	[more]
XP_008449241.1	5.7e-160	98.94	PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucumis m...	[more]
XP_038882769.1	1.8e-158	97.89	chlorophyll a-b binding protein CP29.1, chloroplastic-like [Benincasa hispida]	[more]
XP_022978220.1	1.4e-153	94.70	chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita maxima]	[more]
XP_022950626.1	3.1e-153	94.70	chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of CSPI04G15750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01530.1	4.9e-141	85.21	light harvesting complex photosystem II	[more]
AT3G08940.2	1.5e-137	83.80	light harvesting complex photosystem II	[more]
AT2G40100.1	7.8e-115	75.93	light harvesting complex photosystem II	[more]
AT3G08940.1	2.2e-72	74.03	light harvesting complex photosystem II	[more]
AT2G40100.2	2.3e-66	72.78	light harvesting complex photosystem II	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 59..255 e-value: 4.0E-51 score: 173.8
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 53..284 e-value: 5.0E-70 score: 237.5
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 2..284
None	No IPR available	PANTHER	PTHR21649:SF71	CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC	coord: 2..284
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 47..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G15750.1	CSPI04G15750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding