CSPI04G13750 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G13750
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	60s ribosomal protein L18
Location	Chr4: 11686321 .. 11686599 (-)
RNA-Seq Expression	CSPI04G13750
Synteny	CSPI04G13750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAAAGGAAAGTAAGGTTTCTATTGTTGGGAAAATTGCCGATGAAATTCGCATCTGTGAAGTTCCAGCATTGAAAGCTCTGAGGCTTACTCAGACAGCAAGGTCAAGGATCGAAAAGGCTGGCTGGGAATGTTTGTCATTTGACCAGCTTGCTTTGAGGGCTCATCTGGGTCAGAACACGTTCCTCTTAGAGGTCCTAAGAACTCCCAAGAGGCATGAAAGCATTTTGGTCCAGCACCTGGTGTGTTACACAGCCATTCCTAGCCATATGTGA

mRNA sequence

ATGGAAGGAAAGGAAAGTAAGGTTTCTATTGTTGGGAAAATTGCCGATGAAATTCGCATCTGTGAAGTTCCAGCATTGAAAGCTCTGAGGCTTACTCAGACAGCAAGGTCAAGGATCGAAAAGGCTGGCTGGGAATGTTTGTCATTTGACCAGCTTGCTTTGAGGGCTCATCTGGGTCAGAACACGTTCCTCTTAGAGGTCCTAAGAACTCCCAAGAGGCATGAAAGCATTTTGGTCCAGCACCTGGTGTGTTACACAGCCATTCCTAGCCATATGTGA

Coding sequence (CDS)

ATGGAAGGAAAGGAAAGTAAGGTTTCTATTGTTGGGAAAATTGCCGATGAAATTCGCATCTGTGAAGTTCCAGCATTGAAAGCTCTGAGGCTTACTCAGACAGCAAGGTCAAGGATCGAAAAGGCTGGCTGGGAATGTTTGTCATTTGACCAGCTTGCTTTGAGGGCTCATCTGGGTCAGAACACGTTCCTCTTAGAGGTCCTAAGAACTCCCAAGAGGCATGAAAGCATTTTGGTCCAGCACCTGGTGTGTTACACAGCCATTCCTAGCCATATGTGA

Protein sequence

MEGKESKVSIVGKIADEIRICEVPALKALRLTQTARSRIEKAGWECLSFDQLALRAHLGQNTFLLEVLRTPKRHESILVQHLVCYTAIPSHM*

Homology

[Close]

BLAST of CSPI04G13750 vs. ExPASy Swiss-Prot
Match: P42791 (60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 1.0e-15
Identity = 47/75 (62.67%), Postives = 58/75 (77.33%), Query Frame = 0


Query: 1   MEGKESKVSI-VGKIADEIRICEVPALK--ALRLTQTARSRIEKAGWECLSFDQLALRAH 60
           M GKE K+++ VG I D++R+ E+PA+K  ALR T+ AR+RIEKAG ECL+FDQLALRA 
Sbjct: 71  MTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAP 130

Query: 61  LGQNTFLLEVLRTPK 73
           LGQNT L   LR PK
Sbjct: 131 LGQNTVL---LRGPK 142

[Close]

BLAST of CSPI04G13750 vs. ExPASy Swiss-Prot
Match: Q940B0 (60S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.2e-15
Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = 0


Query: 1   MEGKESKVSI-VGKIADEIRICEVPALK--ALRLTQTARSRIEKAGWECLSFDQLALRAH 60
           M GK+ K+++ VG I D++R+ E+PA+K  ALR T+ AR+RIEKAG ECL+FDQLALRA 
Sbjct: 71  MTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAP 130

Query: 61  LGQNTFLLEVLRTPK 73
           LGQNT L   LR PK
Sbjct: 131 LGQNTVL---LRGPK 142

[Close]

BLAST of CSPI04G13750 vs. ExPASy Swiss-Prot
Match: O65729 (60S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 8.8e-12
Identity = 39/75 (52.00%), Postives = 53/75 (70.67%), Query Frame = 0


Query: 1   MEGKESKVS-IVGKIADEIRICEVPALK--ALRLTQTARSRIEKAGWECLSFDQLALRAH 60
           M+GKE K+  +VG + D+IR+ +VP +K  AL+ T+TAR+RI+KAG ECL+FDQLALR  
Sbjct: 68  MQGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALRLP 127

Query: 61  LGQNTFLLEVLRTPK 73
           L        +LR PK
Sbjct: 128 LTDTV----LLRGPK 138

[Close]

BLAST of CSPI04G13750 vs. ExPASy Swiss-Prot
Match: Q9VS34 (60S ribosomal protein L18 OS=Drosophila melanogaster OX=7227 GN=RpL18 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.3e-10
Identity = 37/70 (52.86%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 5   ESKVSIVGKIADEIRICEVPALK--ALRLTQTARSRIEKAGWECLSFDQLALRAHLGQNT 64
           ES + +VG + D+ R+  VP L   AL +TQTAR RI KAG E L+FDQLALR+  G+NT
Sbjct: 77  ESTIVVVGTVTDDARLLVVPKLTVCALHVTQTARERILKAGGEVLTFDQLALRSPTGKNT 136

Query: 65  FLLEVLRTPK 73
            LL+  RT +
Sbjct: 137 LLLQGRRTAR 146

[Close]

BLAST of CSPI04G13750 vs. ExPASy Swiss-Prot
Match: O22254 (Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18A PE=3 SV=3)

HSP 1 Score: 66.6 bits (161), Expect = 1.7e-10
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 0


Query: 1   MEGKESKVS-IVGKIADEIRICEVPAL--KALRLTQTARSRIEKAGWECLSFDQLALRAH 60
           M+GK+ K++ IVG + D++RI +VPAL   ALR T++AR+RI KAG ECL+FDQLAL   
Sbjct: 71  MDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECLTFDQLALPCP 130

Query: 61  L-GQNTFLLEVLRTPK 73
              +NT L   LR PK
Sbjct: 131 TWSENTVL---LRGPK 143

[Close]

BLAST of CSPI04G13750 vs. ExPASy TrEMBL
Match: A0A0A0L0N3 (Ribosomal_L18e/L15P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G290780 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.5e-43
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MEGKESKVSIVGKIADEIRICEVPALKALRLTQTARSRIEKAGWECLSFDQLALRAHLGQ 60
          MEGKESKVSIVGKIADEIRICEVPALKALRLTQTARSRIEKAGWECLSFDQLALRAHLGQ
Sbjct: 1  MEGKESKVSIVGKIADEIRICEVPALKALRLTQTARSRIEKAGWECLSFDQLALRAHLGQ 60

Query: 61 NTFLLEVLRTPKRHESILVQHLVCYTAIPSHM 93
          NTFLLEVLRTPKRHESILVQHLVCYTAIPSHM
Sbjct: 61 NTFLLEVLRTPKRHESILVQHLVCYTAIPSHM 92

[Close]

BLAST of CSPI04G13750 vs. ExPASy TrEMBL
Match: A0A5A7TD77 (60S ribosomal protein L18-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00400 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 8.8e-23
Identity = 60/79 (75.95%), Postives = 67/79 (84.81%), Query Frame = 0


Query: 1  MEGKESKVS-IVGKIADEIRICEVPALKALRLTQTARSRIEKAGWECLSFDQLALRAHLG 60
          M+GKES++S +VG +ADEIRICEVPALKALRLTQTARSRIEKAGWECL+FDQLA RAHLG
Sbjct: 1  MKGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLG 60

Query: 61 QNTFLLEVLRTPKRHESIL 79
          QNT L   LR PK  +  L
Sbjct: 61 QNTVL---LRGPKNSQEAL 76

[Close]

BLAST of CSPI04G13750 vs. ExPASy TrEMBL
Match: A0A5D3BA35 (60S ribosomal protein L18-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G001230 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 8.8e-23
Identity = 60/79 (75.95%), Postives = 67/79 (84.81%), Query Frame = 0


Query: 1  MEGKESKVS-IVGKIADEIRICEVPALKALRLTQTARSRIEKAGWECLSFDQLALRAHLG 60
          M+GKES++S +VG +ADEIRICEVPALKALRLTQTARSRIEKAGWECL+FDQLA RAHLG
Sbjct: 1  MKGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLG 60

Query: 61 QNTFLLEVLRTPKRHESIL 79
          QNT L   LR PK  +  L
Sbjct: 61 QNTVL---LRGPKNSQEAL 76

[Close]

BLAST of CSPI04G13750 vs. ExPASy TrEMBL
Match: A0A2P5CXV4 (Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_113630 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.6e-18
Identity = 57/101 (56.44%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 2   EGKESKVS-IVGKIADEIRICEVPALK--ALRLTQTARSRIEKAGWECLSFDQLALRAHL 61
           +GKE K++ +VG + D+IR+ EVPALK  ALR T+TAR+RIEKAG ECL+FDQLALRA L
Sbjct: 72  KGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPL 131

Query: 62  GQNTFLLEV-------LRTPKRHESILVQHLVCYTAIPSHM 93
           GQNT  +E+       L +PK    +++QHLVC+TA P+ M
Sbjct: 132 GQNTVKVELFFEDDLCLISPK--SFLILQHLVCHTATPNPM 170

[Close]

BLAST of CSPI04G13750 vs. ExPASy TrEMBL
Match: A0A445CMH8 (Ribosomal_L18e/L15P domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A06g027051 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.6e-18
Identity = 61/117 (52.14%), Postives = 71/117 (60.68%), Query Frame = 0


Query: 1   MEGKESKVS-IVGKIADEIRICEVPALK--ALRLTQTARSRIEKAGWECLSFDQLALRAH 60
           M+GKE K++ +VG + D+IR+ EVPALK  ALR T+TAR+RIEKAG ECL+FDQLALRA 
Sbjct: 71  MKGKEGKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAP 130

Query: 61  LGQNT------------------------FLLEVLRTPKRHESILVQHLVCYTAIPS 91
           LGQNT                        F LE LR P R  S L QHLVC    PS
Sbjct: 131 LGQNTLLVMVIVLADVPIAIPTLNIIDDWFFLEALRMPARLSSTLDQHLVCPIVTPS 187

[Close]

BLAST of CSPI04G13750 vs. NCBI nr
Match: KAA0041394.1 (60S ribosomal protein L18-2 [Cucumis melo var. makuwa])

HSP 1 Score: 115.9 bits (289), Expect = 1.8e-22
Identity = 60/79 (75.95%), Postives = 67/79 (84.81%), Query Frame = 0


Query: 1  MEGKESKVS-IVGKIADEIRICEVPALKALRLTQTARSRIEKAGWECLSFDQLALRAHLG 60
          M+GKES++S +VG +ADEIRICEVPALKALRLTQTARSRIEKAGWECL+FDQLA RAHLG
Sbjct: 1  MKGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLG 60

Query: 61 QNTFLLEVLRTPKRHESIL 79
          QNT L   LR PK  +  L
Sbjct: 61 QNTVL---LRGPKNSQEAL 76

[Close]

BLAST of CSPI04G13750 vs. NCBI nr
Match: TYJ96153.1 (60S ribosomal protein L18-2 [Cucumis melo var. makuwa])

HSP 1 Score: 115.9 bits (289), Expect = 1.8e-22
Identity = 60/79 (75.95%), Postives = 67/79 (84.81%), Query Frame = 0


Query: 1  MEGKESKVS-IVGKIADEIRICEVPALKALRLTQTARSRIEKAGWECLSFDQLALRAHLG 60
          M+GKES++S +VG +ADEIRICEVPALKALRLTQTARSRIEKAGWECL+FDQLA RAHLG
Sbjct: 1  MKGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLG 60

Query: 61 QNTFLLEVLRTPKRHESIL 79
          QNT L   LR PK  +  L
Sbjct: 61 QNTVL---LRGPKNSQEAL 76

[Close]

BLAST of CSPI04G13750 vs. NCBI nr
Match: RYR52134.1 (hypothetical protein Ahy_A06g027051 [Arachis hypogaea])

HSP 1 Score: 99.8 bits (247), Expect = 1.4e-17
Identity = 61/117 (52.14%), Postives = 71/117 (60.68%), Query Frame = 0


Query: 1   MEGKESKVS-IVGKIADEIRICEVPALK--ALRLTQTARSRIEKAGWECLSFDQLALRAH 60
           M+GKE K++ +VG + D+IR+ EVPALK  ALR T+TAR+RIEKAG ECL+FDQLALRA 
Sbjct: 71  MKGKEGKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAP 130

Query: 61  LGQNT------------------------FLLEVLRTPKRHESILVQHLVCYTAIPS 91
           LGQNT                        F LE LR P R  S L QHLVC    PS
Sbjct: 131 LGQNTLLVMVIVLADVPIAIPTLNIIDDWFFLEALRMPARLSSTLDQHLVCPIVTPS 187

[Close]

BLAST of CSPI04G13750 vs. NCBI nr
Match: PON35675.1 (Ribosomal protein [Trema orientale])

HSP 1 Score: 99.8 bits (247), Expect = 1.4e-17
Identity = 55/99 (55.56%), Postives = 73/99 (73.74%), Query Frame = 0


Query: 2   EGKESKVS-IVGKIADEIRICEVPALK--ALRLTQTARSRIEKAGWECLSFDQLALRAHL 61
           +GKE K++ +VG + D+IR+ EVPALK  ALR T+TAR+RIEKAG ECL+FDQLALRA L
Sbjct: 72  KGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPL 131

Query: 62  GQNTFLLEVLRTP-----KRHESILVQHLVCYTAIPSHM 93
           GQNT  +E+L         +   +++QHLVC+TA P+ M
Sbjct: 132 GQNTVKVELLFEDDLCLISQKSFLILQHLVCHTATPNPM 170

[Close]

BLAST of CSPI04G13750 vs. NCBI nr
Match: PON65874.1 (Ribosomal protein [Parasponia andersonii])

HSP 1 Score: 99.8 bits (247), Expect = 1.4e-17
Identity = 57/101 (56.44%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 2   EGKESKVS-IVGKIADEIRICEVPALK--ALRLTQTARSRIEKAGWECLSFDQLALRAHL 61
           +GKE K++ +VG + D+IR+ EVPALK  ALR T+TAR+RIEKAG ECL+FDQLALRA L
Sbjct: 72  KGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPL 131

Query: 62  GQNTFLLEV-------LRTPKRHESILVQHLVCYTAIPSHM 93
           GQNT  +E+       L +PK    +++QHLVC+TA P+ M
Sbjct: 132 GQNTVKVELFFEDDLCLISPK--SFLILQHLVCHTATPNPM 170

[Close]

BLAST of CSPI04G13750 vs. TAIR 10
Match: AT3G05590.1 (ribosomal protein L18 )

HSP 1 Score: 84.0 bits (206), Expect = 7.2e-17
Identity = 47/75 (62.67%), Postives = 58/75 (77.33%), Query Frame = 0


Query: 1   MEGKESKVSI-VGKIADEIRICEVPALK--ALRLTQTARSRIEKAGWECLSFDQLALRAH 60
           M GKE K+++ VG I D++R+ E+PA+K  ALR T+ AR+RIEKAG ECL+FDQLALRA 
Sbjct: 71  MTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAP 130

Query: 61  LGQNTFLLEVLRTPK 73
           LGQNT L   LR PK
Sbjct: 131 LGQNTVL---LRGPK 142

[Close]

BLAST of CSPI04G13750 vs. TAIR 10
Match: AT5G27850.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 1.6e-16
Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = 0


Query: 1   MEGKESKVSI-VGKIADEIRICEVPALK--ALRLTQTARSRIEKAGWECLSFDQLALRAH 60
           M GK+ K+++ VG I D++R+ E+PA+K  ALR T+ AR+RIEKAG ECL+FDQLALRA 
Sbjct: 71  MTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAP 130

Query: 61  LGQNTFLLEVLRTPK 73
           LGQNT L   LR PK
Sbjct: 131 LGQNTVL---LRGPK 142

[Close]

BLAST of CSPI04G13750 vs. TAIR 10
Match: AT2G47570.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.2e-11
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 0


Query: 1  MEGKESKVS-IVGKIADEIRICEVPAL--KALRLTQTARSRIEKAGWECLSFDQLALRAH 60
          M+GK+ K++ IVG + D++RI +VPAL   ALR T++AR+RI KAG ECL+FDQLAL   
Sbjct: 18 MDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECLTFDQLALPCP 77

Query: 61 L-GQNTFLLEVLRTPK 73
             +NT L   LR PK
Sbjct: 78 TWSENTVL---LRGPK 90

[Close]

BLAST of CSPI04G13750 vs. TAIR 10
Match: AT2G47570.2 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.2e-11
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 0


Query: 1  MEGKESKVS-IVGKIADEIRICEVPAL--KALRLTQTARSRIEKAGWECLSFDQLALRAH 60
          M+GK+ K++ IVG + D++RI +VPAL   ALR T++AR+RI KAG ECL+FDQLAL   
Sbjct: 18 MDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECLTFDQLALPCP 77

Query: 61 L-GQNTFLLEVLRTPK 73
             +NT L   LR PK
Sbjct: 78 TWSENTVL---LRGPK 90

The following BLAST results are available for this feature:

BLAST of CSPI04G13750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42791	1.0e-15	62.67	60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2	[more]
Q940B0	2.2e-15	61.33	60S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1	[more]
O65729	8.8e-12	52.00	60S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV...	[more]
Q9VS34	1.3e-10	52.86	60S ribosomal protein L18 OS=Drosophila melanogaster OX=7227 GN=RpL18 PE=1 SV=1	[more]
O22254	1.7e-10	53.95	Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18A P...	[more]

BLAST of CSPI04G13750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0N3	1.5e-43	100.00	Ribosomal_L18e/L15P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_...	[more]
A0A5A7TD77	8.8e-23	75.95	60S ribosomal protein L18-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5D3BA35	8.8e-23	75.95	60S ribosomal protein L18-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A2P5CXV4	6.6e-18	56.44	Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_113630 PE=3 SV=...	[more]
A0A445CMH8	6.6e-18	52.14	Ribosomal_L18e/L15P domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy...	[more]

BLAST of CSPI04G13750 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041394.1	1.8e-22	75.95	60S ribosomal protein L18-2 [Cucumis melo var. makuwa]	[more]
TYJ96153.1	1.8e-22	75.95	60S ribosomal protein L18-2 [Cucumis melo var. makuwa]	[more]
RYR52134.1	1.4e-17	52.14	hypothetical protein Ahy_A06g027051 [Arachis hypogaea]	[more]
PON35675.1	1.4e-17	55.56	Ribosomal protein [Trema orientale]	[more]
PON65874.1	1.4e-17	56.44	Ribosomal protein [Parasponia andersonii]	[more]

BLAST of CSPI04G13750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05590.1	7.2e-17	62.67	ribosomal protein L18	[more]
AT5G27850.1	1.6e-16	61.33	Ribosomal protein L18e/L15 superfamily protein	[more]
AT2G47570.1	1.2e-11	53.95	Ribosomal protein L18e/L15 superfamily protein	[more]
AT2G47570.2	1.2e-11	53.95	Ribosomal protein L18e/L15 superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021131	Ribosomal protein L18e/L15P	PFAM	PF17135	Ribosomal_L18	coord: 5..70 e-value: 1.7E-20 score: 73.2
None	No IPR available	GENE3D	3.100.10.10		coord: 1..85 e-value: 2.5E-20 score: 74.9
None	No IPR available	PANTHER	PTHR10934:SF18	60S RIBOSOMAL PROTEIN L18-1-RELATED	coord: 1..73
IPR000039	Ribosomal protein L18e	PANTHER	PTHR10934	60S RIBOSOMAL PROTEIN L18	coord: 1..73
IPR036227	Ribosomal L18e/L15P superfamily	SUPERFAMILY	52080	Ribosomal proteins L15p and L18e	coord: 9..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G13750.1	CSPI04G13750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome