CSPI04G10460 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G10460
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Nuclear transcription factor Y subunit
Location	Chr4: 8591091 .. 8596193 (-)
RNA-Seq Expression	CSPI04G10460
Synteny	CSPI04G10460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATCTCAATCTATGCTTTGTGTTTACCCATTTGCCACCTGTTACCTTTTTCTCCCCAAAGAAAATTTTCTTTCATTGGAAATCTAGAATTTTCTCCCATCCCAAACACTCATCATCTCTTCTCTCTCCTCTTAACTCTGAGTTCTCTCCTTCCATATAATTTATTTGAGAGGTTGTATTTGGTGAGTAGATATCTGTTGGGGGCTTTAGAAATTTCGTTTTCTTTCTTATAATCCCAAATTTTCTTGCACTCCAAACACTGTTTTGTGTTGGGAAATTGTTTTCACTTTCTTTTGGGATTCTTACATTTTCTCACACCCCAAACACTGATCTTCTCTTCTCTCTACTGTGAGTTTATTTTTTTCATTTCTTAAATCTTTTATTACTTTGATTTGTTTGTTTCCTTTCTTTTGATTCTTCTTAATTCGGTTGTACATTGGTAGAAGTTATTTGCCTTTACAAAAGAAAAGCCGCTTGTAGATTGATATATATATGTATGTGTGCATGCATGAAGTGATATGAATGTATGTCTAAATGGGAATTAAGCAACTAACTATGAATTTTGTCATATGTATGTCCAATTTTATGATAGAACTTATGCTAAAAGAATAGAGGTTAATTAAATCATGTACATACCCATATTTCTAGAATTTCATATATATATATATATATATTTCCTAAATTTTGTCAGATATATAACTCACAATTACCTAAGTCATTCAAATATATGTTGTTTCTTTGTTATATATGATATAATGAGACTTGCTTTTGTTTGATAAATAAATTTTCCCATAACAATTAAGAATATCAAAAGTATATAAAAGCTGGTGAAAGTTAAAACTAAATGAAGATATTAATTATGTTACACACTATAAGTTAAAAATCAAAACGAACAAAAAAGACAATAATTTGTTTGAATAGTCAATTATTTTATTATTCACACAGAAATATTTAAAAGAATTATATTATTATTTTCCAATTTTTCATAATTAAATGGTTGGGATACTTTTCTTTCAATCTGTTTTCTCCTTTTCTATGTTACTAGAGAAAAAAAAATCTTTTGTTGGGGACAAAAGTTCCAACATTATCAGATTTCTTTTTAAATTGTCTTTTTAAAGACCATTCTAATTATCTCATTTTCTTTTAGTTAAATATGAACAATATGACTTTTTCCCCCAACAACTTTCAAGTTCTCAATCCAATGTTATCATACTTAATAACATTTTAAAAAAGACAACGATTTCATTTTTTTTATACTTTTGTTTTTTATTTTAAGCTTATAGACAATTTTTTCTATTGTTATCTATACGGTTAAAAGGTAAACTAAAATTTGGAAGAAAAAAAAAAGTAACATCCAAACGCTTGTTTACAAAAAAAACCATATATTTTTGCAAGCCACTAACTTTAGTTTTATATACTGTGATTTCTTTAATCAGAAGTCACCCTTTTGATACCTAAAAGTTTGAAAAAAATCTAGGCAAATGTCCCTTTTAACATGTAGTTCATACACTAAATTGAACAAGTTGAAAGAACTAAGGATGGAGATAATTTAAAAAGTTGAAAGCAAATTTTCTATTCTTTTGTTTAGTTTTCCTCCATCAAGATGGATTTTTGGAGATTTTTCTTTTTGAGTACAATTCGAGAGTTTGGATGCAATGTGCCACGAAGCTTAATTTTTGTTAGTTTAAATTTTGATTTTGTTTTATGTCTTTTTACCTTTATTGTTCTTCAGAAAATAGTGCAAATGATGAGCTCTGAAATAGAATGCAGAAACCATCCAGATTGTGACAATCAGCAAATCACAAACTACTCCACCAATAATTCTCAACCTTGTAGGTTGCACGGCTGCGTTCACGGCGTCAATAGCACCACTGCCTATATGCCGAAAGAAGAAAAAAGAAACTGGGCTTGGCTCAAGCCCTTGGTTGACAGTGAACCAGAGCACAAAACAAGCCCTAAGGAATTGCATATAACTTTGTCCGGTAATTACAATAATTTAATTAAGTATGCATCACCATTCAAACGAGAAAAAAATAATTGAAAATATAGAAAAGCGTATAAGTGATAGACTCCTGTAGACAAACATTTGGAACATGATCTAATAGTGATAGATTTCTGTCATTGATAAGCTTTGACAAACTTTGCTGTATTTACAAGTTTTTTTAAATGTTGTTAAATACCTAATTATTTTGAAATTCAATTGTTATATTTGCAACTATTCATAACTTTGTCTCTATCTTCGAGATAATGTTTAAATATAGGTATAAAATTACGTTTTTGTTACTCAAGTTTTAGTTTATGTTTTTTAACCTATCTTAAATTTAATATAAGTTTTTTTACTAAATATAATTTCATTTTTAAGTCAATTTAATTTTTTTATTAAATATAATAGGGATATTTTTAAAAATAACAAAATAAATTAAAATATTTACAAGTTATGATAAATTTTTAGATTCTATCACTAATAGTCTTCTCTCACTCTGATATATCAATAACTATCAATCATATAATTTGTTATTAGTTGTAAATATTTTGTAAAATTTGTTATTTTTTAAAATTTCTCAATATAATATTCACTTTTTAAGTGAGGAGGGAATATACATTAGTCAACTTAAAATAATTATAAAGTTAAATTATATATTTATTAATTTTAATAGAATGAAAAAGAGTGAAACTTAATTAATTACAACTTCATAATTTTTTTAAAAAAAGTTAGATAGTATGTATCACCTTTTAAGAATAGACAGAAAGTTTGTATTTGATGAAAAGTTGAAGCAAAAGTACTATTGAAACTCCCTATCCAAATTGAGACAAAGAACCAGAGACAACATAACAATTTTTGAAATGAAATGCTGCATAATAATGTTATTAAGAATGATAAGTTTTGGATATGATCAGGTGTAGGACCAACACTACCATATAAGAGTAGAGATGTATCCACTGTTCTTCCATTCATGAATAATGAACACTACCATGCTTCTACTTCTCAATCAGAGCTTCTTACCCTTTCAATGGTTCTTTCTCTCTCTAGGTCTCTATTTTTTCTCTCTCTCTCCTTCATATTGAAACTGATCATTTCTATTTTTTAACAGACAGCCAATACGTCCTATGCATACCACGACCCGTCCTATGGAGGACTGCTGTCTCCATTTGGATTTCAAACAATGGTATGTGGACAAGTTATTTCAAAAAGTCTCATTCCATAATGTTCTCGTTTTTTATTAACGTATGTTTTCTAATTTTTAATTTTTTAATGTAAGAAAACAGTGAAACATGCATGTTTAGTATCCTTCAGCCTTAAGAATAAGAGCTTATTTATTAACTATTTGGTAGTTTTTAGATTTTAATTTTGGAAATTTAAGGTTTTAGTTTCATAATCATTTGGTTAACCATAACCCTACTTTCCTACTTTCAAACTATTAATTTATTTATTTTGTTGTACATATATACACACACATATGCTGTCAAAATTGTATTCAAATAACCAAGTTTTGAAAACACACATCCCATTTGGTAGCCACATGAGTTTTTATTTTAGTTTTTAAAAAACAATTAAGTATTAAATATCATTTCCATTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTGCTGCCTACGGATCTTTTCAAACACCAAATTAAATTATGAAAACTAAAACTAGTAGTCTTACAAAAATTTGTCTTAAAAATTCAACTCTTTTACTTATAATTAACAATCAGCTAAATTGACTTAATTTTAAAAAAGAAAAAAAATTTGTAATCAAATGTAGTTAAATAAACTATTTTTATAAAAAATAACAAATTTGATCAAATATTTACAACATATAGTAAAATTTTAGATCCTACCAATAATAGACACCAATAGAAGTTTATCACTTACTATATTCATAGAATCTAAAATTTTCTATAGTTTGTAAATATTTTAATTTATTTTGCTATTTTTAAAAATACTTCTAATAATATTATTTTAAAAGAATAGTTAAGAATTGGTAACAAAATAAACACCATCTTTTGGAAAAAAATGGTTATAAAATAGAGTTGTATCTTTTTAAACGATTAATACTACGATAAGTGGATGATACTTAAATAGACCATTTGAAATAAGTTATATTGTTGGAGAACAAAGACGTACAATTTTTAAAATTCAAACCATACAAGTAAACCAATGACGAACATATTTGAATTAACGACTATAATAATTAAGTGTACTATTAAATAATTAAGTGTACTATTAATAATAGTTCATATACTGCATCCATTTTTGGGGTACCATGTCTCGCATTTAATTTCCTATATCGAAAAATTTGTTTCTATAAAAACCACTTTCGAGTTTGTTAGGCTCAAGGAGTTGAGCTGAAGGAGTGACCTGTTCTCCTTGTTTTGTTTAAGCCCTACATGAAAAAAAAAAACATTCTTTTTCAACTTTGTATAATTGGAGTCTCATAGCTTTATTCCTACATAAAGCCGTCCACAATTTAACTAAAAAGGTTGATTTTTACTTTAGGATTGTATAGAGTTAAGTTTTAGCTAAAAATAATGTTGATTGTTACTCAGCATAATTCAGACTATAGTAGAATGGCTTTGCCTTTAGCGATGGCAGAAGAACCTGTTTACGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGACAATCCCGAGCCAAGGCCGAAGTCGAAAATAAAATATCCAGATCACAAAGAAAGGTAGACAAACGTAACCAACTATCTATATACAACATAAACATAAATCTCTAACTTTTTAGTTTAAGCTTTTTTCTTCGATAACCAACATGTGTGTGGATCGCAGCCATATCTTCATGAATCGAGACACCTGCACGCCATGAGAAGGGAAAGGGGATGCGGAGGGCGTTTCTTGAGCAAAAACAAGAAGGCAGAAGCTTCGTCTTTGTTGGATGATGATGATGGGGAAGGCAGCAACATTAGTTTAGGCTCTGAATCAATGTGCAATGGCAGCAAGTGTTATCAAGGATCCCAACTACATTTATCTGCATATATATGAACGGTTAGGTGTTCTGGCTTTGAAAATAACTTGTCCTTCCGTTCCTTCAGCTACTTGGAAAGATGAACACTAAATTAGGAC

mRNA sequence

GAAATCTCAATCTATGCTTTGTGTTTACCCATTTGCCACCTGTTACCTTTTTCTCCCCAAAGAAAATTTTCTTTCATTGGAAATCTAGAATTTTCTCCCATCCCAAACACTCATCATCTCTTCTCTCTCCTCTTAACTCTGAGTTCTCTCCTTCCATATAATTTATTTGAGAGGTTGTATTTGGTGAGTAGATATCTGTTGGGGGCTTTAGAAATTTCGTTTTCTTTCTTATAATCCCAAATTTTCTTGCACTCCAAACACTGTTTTGTGTTGGGAAATTGTTTTCACTTTCTTTTGGGATTCTTACATTTTCTCACACCCCAAACACTGATCTTCTCTTCTCTCTACTAAAATAGTGCAAATGATGAGCTCTGAAATAGAATGCAGAAACCATCCAGATTGTGACAATCAGCAAATCACAAACTACTCCACCAATAATTCTCAACCTTGTAGGTTGCACGGCTGCGTTCACGGCGTCAATAGCACCACTGCCTATATGCCGAAAGAAGAAAAAAGAAACTGGGCTTGGCTCAAGCCCTTGGTTGACAGTGAACCAGAGCACAAAACAAGCCCTAAGGAATTGCATATAACTTTGTCCGGTGTAGGACCAACACTACCATATAAGAGTAGAGATGTATCCACTGTTCTTCCATTCATGAATAATGAACACTACCATGCTTCTACTTCTCAATCAGAGCTTCTTACCCTTTCAATGACAGCCAATACGTCCTATGCATACCACGACCCGTCCTATGGAGGACTGCTGTCTCCATTTGGATTTCAAACAATGCATAATTCAGACTATAGTAGAATGGCTTTGCCTTTAGCGATGGCAGAAGAACCTGTTTACGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGACAATCCCGAGCCAAGGCCGAAGTCGAAAATAAAATATCCAGATCACAAAGAAAGCCATATCTTCATGAATCGAGACACCTGCACGCCATGAGAAGGGAAAGGGGATGCGGAGGGCGTTTCTTGAGCAAAAACAAGAAGGCAGAAGCTTCGTCTTTGTTGGATGATGATGATGGGGAAGGCAGCAACATTAGTTTAGGCTCTGAATCAATGTGCAATGGCAGCAAGTGTTATCAAGGATCCCAACTACATTTATCTGCATATATATGAACGGTTAGGTGTTCTGGCTTTGAAAATAACTTGTCCTTCCGTTCCTTCAGCTACTTGGAAAGATGAACACTAAATTAGGAC

Coding sequence (CDS)

ATGATGAGCTCTGAAATAGAATGCAGAAACCATCCAGATTGTGACAATCAGCAAATCACAAACTACTCCACCAATAATTCTCAACCTTGTAGGTTGCACGGCTGCGTTCACGGCGTCAATAGCACCACTGCCTATATGCCGAAAGAAGAAAAAAGAAACTGGGCTTGGCTCAAGCCCTTGGTTGACAGTGAACCAGAGCACAAAACAAGCCCTAAGGAATTGCATATAACTTTGTCCGGTGTAGGACCAACACTACCATATAAGAGTAGAGATGTATCCACTGTTCTTCCATTCATGAATAATGAACACTACCATGCTTCTACTTCTCAATCAGAGCTTCTTACCCTTTCAATGACAGCCAATACGTCCTATGCATACCACGACCCGTCCTATGGAGGACTGCTGTCTCCATTTGGATTTCAAACAATGCATAATTCAGACTATAGTAGAATGGCTTTGCCTTTAGCGATGGCAGAAGAACCTGTTTACGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGACAATCCCGAGCCAAGGCCGAAGTCGAAAATAAAATATCCAGATCACAAAGAAAGCCATATCTTCATGAATCGAGACACCTGCACGCCATGAGAAGGGAAAGGGGATGCGGAGGGCGTTTCTTGAGCAAAAACAAGAAGGCAGAAGCTTCGTCTTTGTTGGATGATGATGATGGGGAAGGCAGCAACATTAGTTTAGGCTCTGAATCAATGTGCAATGGCAGCAAGTGTTATCAAGGATCCCAACTACATTTATCTGCATATATATGA

Protein sequence

MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAYMPKEEKRNWAWLKPLVDSEPEHKTSPKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLTLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI*

Homology

[Close]

BLAST of CSPI04G10460 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.5e-24
Identity = 70/131 (53.44%), Postives = 85/131 (64.89%), Query Frame = 0


Query: 126 YHDPSYGGLLSPFGFQTMHNSDY-----SRMALPLAMAEEPVYVNAKQYHGILRRRQSRA 185
           Y DP YGGL+  +G Q +    Y      R ALPL MA+EPVYVNAKQY GILRRR++RA
Sbjct: 133 YQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARA 192

Query: 186 KAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNIS 245
           KAE+E K+ R  RKPYLHESRH HAMRR R  GGRF +K  + EA      +D  G +  
Sbjct: 193 KAELERKVIR-DRKPYLHESRHKHAMRRARASGGRF-AKKSEVEAG-----EDAGGRDRE 252

Query: 246 LGSESMCNGSK 252
            GS +  +GS+
Sbjct: 253 RGSATNSSGSE 256

[Close]

BLAST of CSPI04G10460 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.6e-24
Identity = 97/271 (35.79%), Postives = 127/271 (46.86%), Query Frame = 0


Query: 10  NHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAYMPKEEKRNWAWLKPLVDSEPEHK- 69
           N  D +     + S N+  P          NS+     K  K     L+      P ++ 
Sbjct: 15  NKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIALALESNGSKSPSNRD 74

Query: 70  -TSPKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQ----SELLTLSMTANTS 129
            T  KE  +T      T P  + D S      N E  H   +Q     +L+  ++   +S
Sbjct: 75  NTVNKESQVT------TSPQSAGDYSD----KNQESLHHGITQPPPHPQLVGHTVGWASS 134

Query: 130 YAYHDPSYGGLLS-----PFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQS 189
             Y DP Y G++      P GF       +SRM LP  MA+EPV+VNAKQY  ILRRRQ+
Sbjct: 135 NPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVNAKQYQAILRRRQA 194

Query: 190 RAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSK------NKKAEASSLLDDD 249
           RAKAE+E K+ +S RKPYLHESRH HAMRR RG GGRF  K       +KAE  S     
Sbjct: 195 RAKAELEKKLIKS-RKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASKRKAEEKSNGHVT 254

Query: 250 DGEGSNISLGSESMCNGSKCYQGSQLHLSAY 264
               S+ S   E+     +  QG ++  SAY
Sbjct: 255 QSPSSSNSDQGEAWNGDYRTPQGDEMQSSAY 274

[Close]

BLAST of CSPI04G10460 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.3e-23
Identity = 78/187 (41.71%), Postives = 99/187 (52.94%), Query Frame = 0


Query: 74  LHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHA---STSQSELLTLSMTANTSYAYHDPS 133
           +H     +G     + RD     P  +  +Y +   S   S+  T +  A   Y Y DP 
Sbjct: 5   IHELSDNIGSHEKQEQRDSHFQPPIPSARNYESIVTSLVYSDPGTTNSMAPGQYPYPDPY 64

Query: 134 YGGLLSP-------FGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAE 193
           Y  + +P          Q M       + LP    EEPV+VNAKQYHGILRRRQSRA+ E
Sbjct: 65  YRSIFAPPPQPYTGVHLQLM-GVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRARLE 124

Query: 194 VENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGS 251
            +NK+ +S RKPYLHESRHLHA+RR RGCGGRFL+  K+ E     D    E SN+S G 
Sbjct: 125 SQNKVIKS-RKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHE--DSSHEEKSNLSAGK 184

[Close]

BLAST of CSPI04G10460 vs. ExPASy Swiss-Prot
Match: Q9LNP6 (Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana OX=3702 GN=NFYA8 PE=1 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-21
Identity = 59/116 (50.86%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 120 ANTSYAYHDPSYGGLLSPFGF---QTMHNSDYSRMALPLAMAE-EPVYVNAKQYHGILRR 179
           AN S+ Y DP +GGL+ P  +    T+ N   +R+ LP  + E EPV+VNAKQ+H I+RR
Sbjct: 129 ANFSFHYADPHFGGLM-PAAYLPQATIWNPQMTRVPLPFDLIENEPVFVNAKQFHAIMRR 188

Query: 180 RQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDD 232
           RQ RAK E +NK+ ++ RKPYLHESRH+HA++R RG GGRFL+  K  E++    D
Sbjct: 189 RQQRAKLEAQNKLIKA-RKPYLHESRHVHALKRPRGSGGRFLNTKKLQESTDPKQD 242

[Close]

BLAST of CSPI04G10460 vs. ExPASy Swiss-Prot
Match: Q93ZH2 (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 7.8e-21
Identity = 63/137 (45.99%), Postives = 82/137 (59.85%), Query Frame = 0


Query: 98  FMNNEHYHASTSQSELLTLSMTANTSYAYHDPSYGGLL-------SPFGFQTMHNSDYSR 157
           F +N    + T    +      AN S+ Y DP YGGLL       +P     M +    R
Sbjct: 109 FASNPKQGSMTGFPNIHFAPAQANFSFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGR 168

Query: 158 MALPLAMAE-EPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRE 217
           + LP  + E +PV+VNAKQYH I+RRRQ RAK E +NK+ R+ RKPYLHESRH+HA++R 
Sbjct: 169 VPLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRA-RKPYLHESRHVHALKRP 228

Query: 218 RGCGGRFLSKNKKAEAS 227
           RG GGRFL+  K  + S
Sbjct: 229 RGSGGRFLNTKKLLQES 244

[Close]

BLAST of CSPI04G10460 vs. ExPASy TrEMBL
Match: A0A0A0KWA0 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_4G159320 PE=3 SV=1)

HSP 1 Score: 529.3 bits (1362), Expect = 9.5e-147
Identity = 259/264 (98.11%), Postives = 262/264 (99.24%), Query Frame = 0


Query: 1   MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAYMPKEEKRNWAWLKPL 60
           MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTA+MPKEEKRNWAW KPL
Sbjct: 81  MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPL 140

Query: 61  VDSEPEHKTSPKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLTLSMTA 120
           VDS+PEHKTS KELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELL+LSMTA
Sbjct: 141 VDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTA 200

Query: 121 NTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRA 180
           NTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRA
Sbjct: 201 NTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRA 260

Query: 181 KAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNIS 240
           KAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNIS
Sbjct: 261 KAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNIS 320

Query: 241 LGSESMCNGSKCYQGSQLHLSAYI 265
           LGSESMCNGSKCYQGSQLHLSAYI
Sbjct: 321 LGSESMCNGSKCYQGSQLHLSAYI 344

[Close]

BLAST of CSPI04G10460 vs. ExPASy TrEMBL
Match: A0A1S3CEE5 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103499544 PE=3 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 1.9e-118
Identity = 230/270 (85.19%), Postives = 235/270 (87.04%), Query Frame = 0


Query: 1   MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAYMPKEEKRNWAWLKPL 60
           MMSSEIEC N PDCDNQQITNY TNNSQPC+L    HG NSTTA M KEEKRNWAW K L
Sbjct: 1   MMSSEIECGNRPDCDNQQITNY-TNNSQPCKL----HGGNSTTANMSKEEKRNWAWPKGL 60

Query: 61  VDSEPEHKTSPKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLTLSMTA 120
           VDSEP  +TS KE+ ITLSGV  TLPYKSRD STVLP MNNEHYHASTSQ ELLTLSMT 
Sbjct: 61  VDSEPVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYHASTSQPELLTLSMTT 120

Query: 121 NTSYAYHDPSYGGLLSPFGFQTMHNSDYS-----RMALPLAMAEEPVYVNAKQYHGILRR 180
           +TSY YHDPSYGGL SPF FQTMHNSDYS     RMALPLAMAEEPVYVNAKQYHGILRR
Sbjct: 121 DTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRR 180

Query: 181 RQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEAS-SLLDDDDG 240
           RQSRAKAEVEN+ISRSQRKPYLHESRHLHAMRRERGCGGRFLSK KK EAS SL DDDDG
Sbjct: 181 RQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDG 240

Query: 241 EGSNISLGSESMCNGSKCYQGSQLHLSAYI 265
           EGSNISLGSESMCNGS CYQGSQLHLSAYI
Sbjct: 241 EGSNISLGSESMCNGSNCYQGSQLHLSAYI 265

[Close]

BLAST of CSPI04G10460 vs. ExPASy TrEMBL
Match: A0A6J1DFC4 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111019574 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.4e-81
Identity = 182/280 (65.00%), Postives = 206/280 (73.57%), Query Frame = 0


Query: 1   MMSSEIECRNHPDCDNQQI----TNYSTNNSQPCRLHGCVHG--VNSTTAYMPKEEKRNW 60
           MMSS  E RN P CDN Q      NY+T+NSQ    HG  HG    +TT  M KE++ NW
Sbjct: 1   MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNW 60

Query: 61  AWLKPLVDSEPEHKTSPKELHITLS----GVGPTLPYKSRDVSTVLPFMNNEHYHASTSQ 120
           AW K LV S P  KTS K++  T+S    G     P KSRD S +LP MNNEH  ASTS 
Sbjct: 61  AWPKGLVSSGPGPKTSIKQMQTTISPPQGGESAATPNKSRDASIMLPLMNNEHL-ASTSH 120

Query: 121 SELLTLSMTANTSYAYHDPSYGGL-LSPFGFQTMHNSDYS-----RMALPLAMAEEPVYV 180
           SEL+TL MTA TSY YHD   GG+ + PFGFQT+ NS+YS     RMALPLA+AEEPVYV
Sbjct: 121 SELVTLPMTA-TSYQYHDACNGGITMPPFGFQTL-NSEYSKVAHGRMALPLAIAEEPVYV 180

Query: 181 NAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAE 240
           NAKQYHGILRRRQSRAKAEVEN+I+RSQ+KPYLHESRHLHAMRRERGCGGRF+SK KK E
Sbjct: 181 NAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVE 240

Query: 241 ASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI 265
           +S+ +DDD+  GSNISLGSE M NGS CY+GS LHLSAYI
Sbjct: 241 SSASMDDDE-NGSNISLGSEPMSNGSSCYEGSGLHLSAYI 276

[Close]

BLAST of CSPI04G10460 vs. ExPASy TrEMBL
Match: A0A6J1DBT5 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111019574 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.4e-81
Identity = 182/280 (65.00%), Postives = 206/280 (73.57%), Query Frame = 0


Query: 1   MMSSEIECRNHPDCDNQQI----TNYSTNNSQPCRLHGCVHG--VNSTTAYMPKEEKRNW 60
           MMSS  E RN P CDN Q      NY+T+NSQ    HG  HG    +TT  M KE++ NW
Sbjct: 8   MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNW 67

Query: 61  AWLKPLVDSEPEHKTSPKELHITLS----GVGPTLPYKSRDVSTVLPFMNNEHYHASTSQ 120
           AW K LV S P  KTS K++  T+S    G     P KSRD S +LP MNNEH  ASTS 
Sbjct: 68  AWPKGLVSSGPGPKTSIKQMQTTISPPQGGESAATPNKSRDASIMLPLMNNEHL-ASTSH 127

Query: 121 SELLTLSMTANTSYAYHDPSYGGL-LSPFGFQTMHNSDYS-----RMALPLAMAEEPVYV 180
           SEL+TL MTA TSY YHD   GG+ + PFGFQT+ NS+YS     RMALPLA+AEEPVYV
Sbjct: 128 SELVTLPMTA-TSYQYHDACNGGITMPPFGFQTL-NSEYSKVAHGRMALPLAIAEEPVYV 187

Query: 181 NAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAE 240
           NAKQYHGILRRRQSRAKAEVEN+I+RSQ+KPYLHESRHLHAMRRERGCGGRF+SK KK E
Sbjct: 188 NAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVE 247

Query: 241 ASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI 265
           +S+ +DDD+  GSNISLGSE M NGS CY+GS LHLSAYI
Sbjct: 248 SSASMDDDE-NGSNISLGSEPMSNGSSCYEGSGLHLSAYI 283

[Close]

BLAST of CSPI04G10460 vs. ExPASy TrEMBL
Match: A0A6J1EKQ7 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111435455 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 4.5e-64
Identity = 151/267 (56.55%), Postives = 177/267 (66.29%), Query Frame = 0


Query: 1   MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAYMPKEEKRNWAWLKPL 60
           MMSS+ + R HPD            N QP    G       TT  + KE+K NW W   L
Sbjct: 1   MMSSKTDYRYHPD----------GYNFQPSWWLGA-----PTTIAISKEDKVNWVWPNGL 60

Query: 61  VDSEPEHKTSPKELHITLS--GVGPTL-PYKSRDVSTVLPFMNNEHYHASTSQSELLTLS 120
           VD+ P+   S KE+  T++    G ++   +S+D S VLP MNNEHYHAST +       
Sbjct: 61  VDNGPQPNRSTKEVQETMTPPPYGESIVARQSKDASIVLPLMNNEHYHASTYE------- 120

Query: 121 MTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQ 180
            T  TSY Y+D  YG L+ PFGFQT+HNS+Y+RM LPLAMAEEPVYVNAKQYHGILRRRQ
Sbjct: 121 -TTATSYQYNDVYYGQLMPPFGFQTLHNSEYTRMTLPLAMAEEPVYVNAKQYHGILRRRQ 180

Query: 181 SRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGS 240
           SRAKAEV NKISRSQ+KPYLHESRHLHAMRRERGC GRF+SK K  E  + +  DDG+GS
Sbjct: 181 SRAKAEVLNKISRSQKKPYLHESRHLHAMRRERGCRGRFVSKKKTVEPIASM-ADDGKGS 234

Query: 241 NISLGSESMCNGSKCYQGSQLHLSAYI 265
           N+S         S CYQGS+LHLSAYI
Sbjct: 241 NMS---------SNCYQGSELHLSAYI 234

[Close]

BLAST of CSPI04G10460 vs. NCBI nr
Match: XP_031739714.1 (nuclear transcription factor Y subunit A-7 isoform X2 [Cucumis sativus])

HSP 1 Score: 529.3 bits (1362), Expect = 2.0e-146
Identity = 259/264 (98.11%), Postives = 262/264 (99.24%), Query Frame = 0


Query: 1   MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAYMPKEEKRNWAWLKPL 60
           MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTA+MPKEEKRNWAW KPL
Sbjct: 1   MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPL 60

Query: 61  VDSEPEHKTSPKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLTLSMTA 120
           VDS+PEHKTS KELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELL+LSMTA
Sbjct: 61  VDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTA 120

Query: 121 NTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRA 180
           NTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRA
Sbjct: 121 NTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRA 180

Query: 181 KAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNIS 240
           KAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNIS
Sbjct: 181 KAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNIS 240

Query: 241 LGSESMCNGSKCYQGSQLHLSAYI 265
           LGSESMCNGSKCYQGSQLHLSAYI
Sbjct: 241 LGSESMCNGSKCYQGSQLHLSAYI 264

[Close]

BLAST of CSPI04G10460 vs. NCBI nr
Match: XP_004150466.2 (nuclear transcription factor Y subunit A-7 isoform X1 [Cucumis sativus])

HSP 1 Score: 529.3 bits (1362), Expect = 2.0e-146
Identity = 259/264 (98.11%), Postives = 262/264 (99.24%), Query Frame = 0


Query: 1   MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAYMPKEEKRNWAWLKPL 60
           MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTA+MPKEEKRNWAW KPL
Sbjct: 81  MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPL 140

Query: 61  VDSEPEHKTSPKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLTLSMTA 120
           VDS+PEHKTS KELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELL+LSMTA
Sbjct: 141 VDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTA 200

Query: 121 NTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRA 180
           NTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRA
Sbjct: 201 NTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRA 260

Query: 181 KAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNIS 240
           KAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNIS
Sbjct: 261 KAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNIS 320

Query: 241 LGSESMCNGSKCYQGSQLHLSAYI 265
           LGSESMCNGSKCYQGSQLHLSAYI
Sbjct: 321 LGSESMCNGSKCYQGSQLHLSAYI 344

[Close]

BLAST of CSPI04G10460 vs. NCBI nr
Match: XP_008460780.1 (PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis melo])

HSP 1 Score: 435.3 bits (1118), Expect = 3.9e-118
Identity = 230/270 (85.19%), Postives = 235/270 (87.04%), Query Frame = 0


Query: 1   MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAYMPKEEKRNWAWLKPL 60
           MMSSEIEC N PDCDNQQITNY TNNSQPC+L    HG NSTTA M KEEKRNWAW K L
Sbjct: 1   MMSSEIECGNRPDCDNQQITNY-TNNSQPCKL----HGGNSTTANMSKEEKRNWAWPKGL 60

Query: 61  VDSEPEHKTSPKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLTLSMTA 120
           VDSEP  +TS KE+ ITLSGV  TLPYKSRD STVLP MNNEHYHASTSQ ELLTLSMT 
Sbjct: 61  VDSEPVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYHASTSQPELLTLSMTT 120

Query: 121 NTSYAYHDPSYGGLLSPFGFQTMHNSDYS-----RMALPLAMAEEPVYVNAKQYHGILRR 180
           +TSY YHDPSYGGL SPF FQTMHNSDYS     RMALPLAMAEEPVYVNAKQYHGILRR
Sbjct: 121 DTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRR 180

Query: 181 RQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEAS-SLLDDDDG 240
           RQSRAKAEVEN+ISRSQRKPYLHESRHLHAMRRERGCGGRFLSK KK EAS SL DDDDG
Sbjct: 181 RQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDG 240

Query: 241 EGSNISLGSESMCNGSKCYQGSQLHLSAYI 265
           EGSNISLGSESMCNGS CYQGSQLHLSAYI
Sbjct: 241 EGSNISLGSESMCNGSNCYQGSQLHLSAYI 265

[Close]

BLAST of CSPI04G10460 vs. NCBI nr
Match: XP_031739715.1 (nuclear transcription factor Y subunit A-7 isoform X3 [Cucumis sativus] >XP_031739716.1 nuclear transcription factor Y subunit A-7 isoform X3 [Cucumis sativus] >KAE8649351.1 hypothetical protein Csa_019119 [Cucumis sativus])

HSP 1 Score: 433.3 bits (1113), Expect = 1.5e-117
Identity = 215/219 (98.17%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 46  MPKEEKRNWAWLKPLVDSEPEHKTSPKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYH 105
           MPKEEKRNWAW KPLVDS+PEHKTS KELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYH
Sbjct: 1   MPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYH 60

Query: 106 ASTSQSELLTLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVN 165
           ASTSQSELL+LSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVN
Sbjct: 61  ASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVN 120

Query: 166 AKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEA 225
           AKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEA
Sbjct: 121 AKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEA 180

Query: 226 SSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI 265
           SSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI
Sbjct: 181 SSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI 219

[Close]

BLAST of CSPI04G10460 vs. NCBI nr
Match: XP_022151660.1 (nuclear transcription factor Y subunit A-7-like isoform X1 [Momordica charantia])

HSP 1 Score: 312.8 bits (800), Expect = 2.9e-81
Identity = 182/280 (65.00%), Postives = 206/280 (73.57%), Query Frame = 0


Query: 1   MMSSEIECRNHPDCDNQQI----TNYSTNNSQPCRLHGCVHG--VNSTTAYMPKEEKRNW 60
           MMSS  E RN P CDN Q      NY+T+NSQ    HG  HG    +TT  M KE++ NW
Sbjct: 8   MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNW 67

Query: 61  AWLKPLVDSEPEHKTSPKELHITLS----GVGPTLPYKSRDVSTVLPFMNNEHYHASTSQ 120
           AW K LV S P  KTS K++  T+S    G     P KSRD S +LP MNNEH  ASTS 
Sbjct: 68  AWPKGLVSSGPGPKTSIKQMQTTISPPQGGESAATPNKSRDASIMLPLMNNEHL-ASTSH 127

Query: 121 SELLTLSMTANTSYAYHDPSYGGL-LSPFGFQTMHNSDYS-----RMALPLAMAEEPVYV 180
           SEL+TL MTA TSY YHD   GG+ + PFGFQT+ NS+YS     RMALPLA+AEEPVYV
Sbjct: 128 SELVTLPMTA-TSYQYHDACNGGITMPPFGFQTL-NSEYSKVAHGRMALPLAIAEEPVYV 187

Query: 181 NAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAE 240
           NAKQYHGILRRRQSRAKAEVEN+I+RSQ+KPYLHESRHLHAMRRERGCGGRF+SK KK E
Sbjct: 188 NAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVE 247

Query: 241 ASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI 265
           +S+ +DDD+  GSNISLGSE M NGS CY+GS LHLSAYI
Sbjct: 248 SSASMDDDE-NGSNISLGSEPMSNGSSCYEGSGLHLSAYI 283

[Close]

BLAST of CSPI04G10460 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-25
Identity = 70/131 (53.44%), Postives = 85/131 (64.89%), Query Frame = 0


Query: 126 YHDPSYGGLLSPFGFQTMHNSDY-----SRMALPLAMAEEPVYVNAKQYHGILRRRQSRA 185
           Y DP YGGL+  +G Q +    Y      R ALPL MA+EPVYVNAKQY GILRRR++RA
Sbjct: 133 YQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARA 192

Query: 186 KAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNIS 245
           KAE+E K+ R  RKPYLHESRH HAMRR R  GGRF +K  + EA      +D  G +  
Sbjct: 193 KAELERKVIR-DRKPYLHESRHKHAMRRARASGGRF-AKKSEVEAG-----EDAGGRDRE 252

Query: 246 LGSESMCNGSK 252
            GS +  +GS+
Sbjct: 253 RGSATNSSGSE 256

[Close]

BLAST of CSPI04G10460 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-25
Identity = 70/131 (53.44%), Postives = 85/131 (64.89%), Query Frame = 0


Query: 126 YHDPSYGGLLSPFGFQTMHNSDY-----SRMALPLAMAEEPVYVNAKQYHGILRRRQSRA 185
           Y DP YGGL+  +G Q +    Y      R ALPL MA+EPVYVNAKQY GILRRR++RA
Sbjct: 132 YQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARA 191

Query: 186 KAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNIS 245
           KAE+E K+ R  RKPYLHESRH HAMRR R  GGRF +K  + EA      +D  G +  
Sbjct: 192 KAELERKVIR-DRKPYLHESRHKHAMRRARASGGRF-AKKSEVEAG-----EDAGGRDRE 251

Query: 246 LGSESMCNGSK 252
            GS +  +GS+
Sbjct: 252 RGSATNSSGSE 255

[Close]

BLAST of CSPI04G10460 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-25
Identity = 70/131 (53.44%), Postives = 85/131 (64.89%), Query Frame = 0


Query: 126 YHDPSYGGLLSPFGFQTMHNSDY-----SRMALPLAMAEEPVYVNAKQYHGILRRRQSRA 185
           Y DP YGGL+  +G Q +    Y      R ALPL MA+EPVYVNAKQY GILRRR++RA
Sbjct: 132 YQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARA 191

Query: 186 KAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNIS 245
           KAE+E K+ R  RKPYLHESRH HAMRR R  GGRF +K  + EA      +D  G +  
Sbjct: 192 KAELERKVIR-DRKPYLHESRHKHAMRRARASGGRF-AKKSEVEAG-----EDAGGRDRE 251

Query: 246 LGSESMCNGSK 252
            GS +  +GS+
Sbjct: 252 RGSATNSSGSE 255

[Close]

BLAST of CSPI04G10460 vs. TAIR 10
Match: AT5G12840.3 (nuclear factor Y, subunit A1 )

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-25
Identity = 70/131 (53.44%), Postives = 85/131 (64.89%), Query Frame = 0


Query: 126 YHDPSYGGLLSPFGFQTMHNSDY-----SRMALPLAMAEEPVYVNAKQYHGILRRRQSRA 185
           Y DP YGGL+  +G Q +    Y      R ALPL MA+EPVYVNAKQY GILRRR++RA
Sbjct: 133 YQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARA 192

Query: 186 KAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNIS 245
           KAE+E K+ R  RKPYLHESRH HAMRR R  GGRF +K  + EA      +D  G +  
Sbjct: 193 KAELERKVIR-DRKPYLHESRHKHAMRRARASGGRF-AKKSEVEAG-----EDAGGRDRE 252

Query: 246 LGSESMCNGSK 252
            GS +  +GS+
Sbjct: 253 RGSATNSSGSE 256

[Close]

BLAST of CSPI04G10460 vs. TAIR 10
Match: AT1G30500.1 (nuclear factor Y, subunit A7 )

HSP 1 Score: 114.0 bits (284), Expect = 1.8e-25
Identity = 76/182 (41.76%), Postives = 99/182 (54.40%), Query Frame = 0


Query: 74  LHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHA---STSQSELLTLSMTANTSYAYHDPS 133
           +H     +G     + RD     P  +  +Y +   S   S+  T +  A   Y Y DP 
Sbjct: 5   IHELSDNIGSHEKQEQRDSHFQPPIPSARNYESIVTSLVYSDPGTTNSMAPGQYPYPDPY 64

Query: 134 YGGLLS--PFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKI 193
           Y  + +  P  +  +       + LP    EEPV+VNAKQYHGILRRRQSRA+ E +NK+
Sbjct: 65  YRSIFAPPPQPYTGLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKV 124

Query: 194 SRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSESMCN 251
            +S RKPYLHESRHLHA+RR RGCGGRFL+  K+ E     D    E SN+S G  +M  
Sbjct: 125 IKS-RKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHE--DSSHEEKSNLSAGKSAMAA 183

The following BLAST results are available for this feature:

BLAST of CSPI04G10460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXV5	1.5e-24	53.44	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	2.6e-24	35.79	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	1.3e-23	41.71	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9LNP6	1.2e-21	50.86	Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q93ZH2	7.8e-21	45.99	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of CSPI04G10460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWA0	9.5e-147	98.11	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_4G15932...	[more]
A0A1S3CEE5	1.9e-118	85.19	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103499544 P...	[more]
A0A6J1DFC4	1.4e-81	65.00	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1DBT5	1.4e-81	65.00	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1EKQ7	4.5e-64	56.55	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

BLAST of CSPI04G10460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031739714.1	2.0e-146	98.11	nuclear transcription factor Y subunit A-7 isoform X2 [Cucumis sativus]	[more]
XP_004150466.2	2.0e-146	98.11	nuclear transcription factor Y subunit A-7 isoform X1 [Cucumis sativus]	[more]
XP_008460780.1	3.9e-118	85.19	PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis melo]	[more]
XP_031739715.1	1.5e-117	98.17	nuclear transcription factor Y subunit A-7 isoform X3 [Cucumis sativus] >XP_0317...	[more]
XP_022151660.1	2.9e-81	65.00	nuclear transcription factor Y subunit A-7-like isoform X1 [Momordica charantia]	[more]

BLAST of CSPI04G10460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12840.1	1.1e-25	53.44	nuclear factor Y, subunit A1	[more]
AT5G12840.2	1.1e-25	53.44	nuclear factor Y, subunit A1	[more]
AT5G12840.4	1.1e-25	53.44	nuclear factor Y, subunit A1	[more]
AT5G12840.3	1.1e-25	53.44	nuclear factor Y, subunit A1	[more]
AT1G30500.1	1.8e-25	41.76	nuclear factor Y, subunit A7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 174..194
None	No IPR available	GENE3D	6.10.250.2430		coord: 158..221 e-value: 9.3E-32 score: 111.4
None	No IPR available	PANTHER	PTHR12632:SF43	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1	coord: 64..238
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 161..183 score: 77.29 coord: 193..216 score: 80.56
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 157..219 e-value: 1.0E-34 score: 131.4
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 160..216 e-value: 2.0E-26 score: 92.3
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 64..238
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 158..219 score: 38.138588
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 163..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G10460.1	CSPI04G10460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity