CSPI03G44760 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G44760
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	calcium homeostasis endoplasmic reticulum protein
Location	Chr3: 38305808 .. 38306559 (-)
RNA-Seq Expression	CSPI03G44760
Synteny	CSPI03G44760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCCTGTTGTGGGTTATTCCTGGAATGCTGAGAAAAATGAAGATTGGAGGTGGAGTCCCATACTCTTCCATGAACCCTTTGGATATTCCTTTCCTCCATCCAATATATCTCCCTTTGAAGTTCTCAAGAGAGTGTCGAAGCTCTCTAAAGGTGAGGTTAATCTCCCATAAGGACCCATGAGTTTTGATGGTAAAGAGGATGATTTTGAGTATGAGAGAGAGAGTTACGTGTACGTAAGGGTGGAGCTTGCATTCCTCCTCCTCCCAACGTTCAGGTTGACCTAGAGACTGGTGCTTACGCTGGTGGAGATGTAGAACGAAAAGGCTCTAAAAGATTAGGACTTGAACCAACAACCAACTCAAACGAGAATAGTGTCAATATGATGATGTTTATACTTCTTATAGAAAACAAAGAAGTACCAATTACCACTCCTCTACAAGCACAAGGCCCACAACATAGTGAAAAGAAACCGTTCAATTTATTACTAGGAGTGACCTCATGTTTGGAACATGTAACGTACCAACCTTTTTTTTCTATTTTCTTCTAAGTTTTGCTGAATTTGTTCATCATTATTAGGACATTAGCATCAGATTCAAACAGTTGAATTGTGCATTTAGTTTTGATCTAAAGAATCATTCTCGAGAAAACATACATTACAAATTGAGACTCGGTTTTCTTTTAGGATTTTGACTTCTCGAGTAAATTGAACAGTGAGTTTTCTAGTGCATGGATGCTTTACAACAGTTGA

mRNA sequence

ATGCCTCCTGTTGTGGGTTATTCCTGGAATGCTGAGAAAAATGAAGATTGGAGGTGGAGTCCCATACTCTTCCATGAACCCTTTGGATATTCCTTTCCTCCATCCAATATATCTCCCTTTGAAGTTCTCAAGAGAGTGTCGAAGCTCTCTAAAGGTGAGGGTGGAGCTTGCATTCCTCCTCCTCCCAACGTTCAGGTTGACCTAGAGACTGGTGCTTACGCTGGTGGAGATGTAGAACGAAAAGGCTCTAAAAGATTAGGACTTGAACCAACAACCAACTCAAACGAGAATAGTGATTTTGACTTCTCGAGTAAATTGAACAGTGAGTTTTCTAGTGCATGGATGCTTTACAACAGTTGA

Coding sequence (CDS)

ATGCCTCCTGTTGTGGGTTATTCCTGGAATGCTGAGAAAAATGAAGATTGGAGGTGGAGTCCCATACTCTTCCATGAACCCTTTGGATATTCCTTTCCTCCATCCAATATATCTCCCTTTGAAGTTCTCAAGAGAGTGTCGAAGCTCTCTAAAGGTGAGGGTGGAGCTTGCATTCCTCCTCCTCCCAACGTTCAGGTTGACCTAGAGACTGGTGCTTACGCTGGTGGAGATGTAGAACGAAAAGGCTCTAAAAGATTAGGACTTGAACCAACAACCAACTCAAACGAGAATAGTGATTTTGACTTCTCGAGTAAATTGAACAGTGAGTTTTCTAGTGCATGGATGCTTTACAACAGTTGA

Protein sequence

MPPVVGYSWNAEKNEDWRWSPILFHEPFGYSFPPSNISPFEVLKRVSKLSKGEGGACIPPPPNVQVDLETGAYAGGDVERKGSKRLGLEPTTNSNENSDFDFSSKLNSEFSSAWMLYNS*

Homology

[Close]

BLAST of CSPI03G44760 vs. ExPASy TrEMBL
Match: A0A0A0LJH0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G882920 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.1e-60
Identity = 114/119 (95.80%), Postives = 116/119 (97.48%), Query Frame = 0


Query: 1   MPPVVGYSWNAEKNEDWRWSPILFHEPFGYSFPPSNISPFEVLKRVSKLSKGEGGACIPP 60
           MPPVVGYSWNAEKNEDWRWSPILFHEPFGYSFPPSNISPFEVLKRVSKL KGEGGACIPP
Sbjct: 1   MPPVVGYSWNAEKNEDWRWSPILFHEPFGYSFPPSNISPFEVLKRVSKLFKGEGGACIPP 60

Query: 61  PPNVQVDLETGAYAGGDVERKGSKRLGLEPTTNSNENSDFDFSSKLNSEFSSAWMLYNS 120
           PPNVQVDLETGAYAGGDVERKGS+RLGL+PTTNSNENSDFD SSKLNSEFSSA MLYNS
Sbjct: 61  PPNVQVDLETGAYAGGDVERKGSERLGLKPTTNSNENSDFDLSSKLNSEFSSAGMLYNS 119

[Close]

BLAST of CSPI03G44760 vs. ExPASy TrEMBL
Match: A0A6J1DTD5 (calcium homeostasis endoplasmic reticulum protein OS=Momordica charantia OX=3673 GN=LOC111024140 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.5e-14
Identity = 52/98 (53.06%), Postives = 57/98 (58.16%), Query Frame = 0


Query: 33  PPSNISPFEVLKRVSKLSK--GE---------------------------GGACIPPPPN 92
           PPSNISP EVL+RVSK  K  GE                           GGACIPPPPN
Sbjct: 558 PPSNISPSEVLERVSKFFKEIGEVNPSEGPMSSDTKDDDYEYEREPQVRKGGACIPPPPN 617

Query: 93  VQVDLETGAYAGGDVERKGSKRLGLEPTTNSNENSDFD 102
           +QVD ETGAYA G V+RKGS RLGL  T N NE+S +D
Sbjct: 618 LQVDPETGAYADGSVDRKGSGRLGLGATPNPNEDSQYD 655

[Close]

BLAST of CSPI03G44760 vs. ExPASy TrEMBL
Match: A0A0A0KSG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G215110 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.5e-14
Identity = 52/98 (53.06%), Postives = 57/98 (58.16%), Query Frame = 0


Query: 33  PPSNISPFEVLKRVSKLSK--GE---------------------------GGACIPPPPN 92
           PPS ISP EVL+RVSK  K  GE                           GGACIPPPPN
Sbjct: 565 PPSTISPSEVLERVSKFFKEIGEVNPSEGPMGSDGKDDDFEYEREPPVRKGGACIPPPPN 624

Query: 93  VQVDLETGAYAGGDVERKGSKRLGLEPTTNSNENSDFD 102
           +QVD ETGAYA G V+RKGS RLGL  TTN NE+S +D
Sbjct: 625 LQVDPETGAYADGSVDRKGSGRLGLGATTNPNEDSQYD 662

[Close]

BLAST of CSPI03G44760 vs. ExPASy TrEMBL
Match: A0A6J1IF87 (calcium homeostasis endoplasmic reticulum protein OS=Cucurbita maxima OX=3661 GN=LOC111476699 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 4.3e-14
Identity = 51/98 (52.04%), Postives = 58/98 (59.18%), Query Frame = 0


Query: 33  PPSNISPFEVLKRVSKLSK--GE---------------------------GGACIPPPPN 92
           PPSNISP EVL+RVSK  K  GE                           GGACIPPPPN
Sbjct: 562 PPSNISPSEVLERVSKFFKEIGEVNPSEGPMSSDSKDDDYEYEREPPVRKGGACIPPPPN 621

Query: 93  VQVDLETGAYAGGDVERKGSKRLGLEPTTNSNENSDFD 102
           +QVD ETGAYA G V+RKGS RLGL  ++N NE+S +D
Sbjct: 622 LQVDPETGAYADGSVDRKGSGRLGLGASSNPNEDSQYD 659

[Close]

BLAST of CSPI03G44760 vs. ExPASy TrEMBL
Match: A0A5A7T2P6 (Calcium homeostasis endoplasmic reticulum protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold529G00010 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 5.7e-14
Identity = 51/98 (52.04%), Postives = 57/98 (58.16%), Query Frame = 0


Query: 33  PPSNISPFEVLKRVSKLSK--GE---------------------------GGACIPPPPN 92
           PPS ISP EVL+RVSK  K  GE                           GGACIPPPPN
Sbjct: 565 PPSTISPSEVLERVSKFFKEIGEVNPSEGPMSSDGKDEDFEYEREPPVRKGGACIPPPPN 624

Query: 93  VQVDLETGAYAGGDVERKGSKRLGLEPTTNSNENSDFD 102
           +QVD +TGAYA G V+RKGS RLGL  TTN NE+S +D
Sbjct: 625 LQVDPDTGAYADGSVDRKGSGRLGLGATTNPNEDSQYD 662

[Close]

BLAST of CSPI03G44760 vs. NCBI nr
Match: XP_038897955.1 (calcium homeostasis endoplasmic reticulum protein [Benincasa hispida])

HSP 1 Score: 88.6 bits (218), Expect = 4.0e-14
Identity = 52/98 (53.06%), Postives = 57/98 (58.16%), Query Frame = 0


Query: 33  PPSNISPFEVLKRVSKLSK--GE---------------------------GGACIPPPPN 92
           PPSNISP EVL+RVSK  K  GE                           GGACIPPPPN
Sbjct: 564 PPSNISPSEVLERVSKFFKEIGEVNPSEGPMSSDAKDDDFEYEREPPVRKGGACIPPPPN 623

Query: 93  VQVDLETGAYAGGDVERKGSKRLGLEPTTNSNENSDFD 102
           +QVD ETGAYA G V+RKGS RLGL  T N NE+S +D
Sbjct: 624 LQVDPETGAYADGSVDRKGSGRLGLGATANPNEDSQYD 661

[Close]

BLAST of CSPI03G44760 vs. NCBI nr
Match: XP_004148173.1 (calcium homeostasis endoplasmic reticulum protein [Cucumis sativus] >KGN50691.1 hypothetical protein Csa_005819 [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 5.3e-14
Identity = 52/98 (53.06%), Postives = 57/98 (58.16%), Query Frame = 0


Query: 33  PPSNISPFEVLKRVSKLSK--GE---------------------------GGACIPPPPN 92
           PPS ISP EVL+RVSK  K  GE                           GGACIPPPPN
Sbjct: 565 PPSTISPSEVLERVSKFFKEIGEVNPSEGPMGSDGKDDDFEYEREPPVRKGGACIPPPPN 624

Query: 93  VQVDLETGAYAGGDVERKGSKRLGLEPTTNSNENSDFD 102
           +QVD ETGAYA G V+RKGS RLGL  TTN NE+S +D
Sbjct: 625 LQVDPETGAYADGSVDRKGSGRLGLGATTNPNEDSQYD 662

[Close]

BLAST of CSPI03G44760 vs. NCBI nr
Match: XP_022157442.1 (calcium homeostasis endoplasmic reticulum protein [Momordica charantia] >XP_022157443.1 calcium homeostasis endoplasmic reticulum protein [Momordica charantia])

HSP 1 Score: 88.2 bits (217), Expect = 5.3e-14
Identity = 52/98 (53.06%), Postives = 57/98 (58.16%), Query Frame = 0


Query: 33  PPSNISPFEVLKRVSKLSK--GE---------------------------GGACIPPPPN 92
           PPSNISP EVL+RVSK  K  GE                           GGACIPPPPN
Sbjct: 558 PPSNISPSEVLERVSKFFKEIGEVNPSEGPMSSDTKDDDYEYEREPQVRKGGACIPPPPN 617

Query: 93  VQVDLETGAYAGGDVERKGSKRLGLEPTTNSNENSDFD 102
           +QVD ETGAYA G V+RKGS RLGL  T N NE+S +D
Sbjct: 618 LQVDPETGAYADGSVDRKGSGRLGLGATPNPNEDSQYD 655

[Close]

BLAST of CSPI03G44760 vs. NCBI nr
Match: XP_022976247.1 (calcium homeostasis endoplasmic reticulum protein [Cucurbita maxima])

HSP 1 Score: 87.4 bits (215), Expect = 9.0e-14
Identity = 51/98 (52.04%), Postives = 58/98 (59.18%), Query Frame = 0


Query: 33  PPSNISPFEVLKRVSKLSK--GE---------------------------GGACIPPPPN 92
           PPSNISP EVL+RVSK  K  GE                           GGACIPPPPN
Sbjct: 562 PPSNISPSEVLERVSKFFKEIGEVNPSEGPMSSDSKDDDYEYEREPPVRKGGACIPPPPN 621

Query: 93  VQVDLETGAYAGGDVERKGSKRLGLEPTTNSNENSDFD 102
           +QVD ETGAYA G V+RKGS RLGL  ++N NE+S +D
Sbjct: 622 LQVDPETGAYADGSVDRKGSGRLGLGASSNPNEDSQYD 659

[Close]

BLAST of CSPI03G44760 vs. NCBI nr
Match: XP_023536597.1 (calcium homeostasis endoplasmic reticulum protein isoform X1 [Cucurbita pepo subsp. pepo] >XP_023536598.1 calcium homeostasis endoplasmic reticulum protein isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-13
Identity = 51/98 (52.04%), Postives = 57/98 (58.16%), Query Frame = 0


Query: 33  PPSNISPFEVLKRVSKLSK--GE---------------------------GGACIPPPPN 92
           PPSNISP EVL+RVSK  K  GE                           GGACIPPPPN
Sbjct: 564 PPSNISPSEVLERVSKFFKEIGEVNPSEGPMSSDSKDDDYEYDREPPVRKGGACIPPPPN 623

Query: 93  VQVDLETGAYAGGDVERKGSKRLGLEPTTNSNENSDFD 102
           +QVD ETGAYA G V+RKGS RLGL  + N NE+S +D
Sbjct: 624 LQVDPETGAYADGSVDRKGSGRLGLGASANPNEDSQYD 661

[Close]

BLAST of CSPI03G44760 vs. TAIR 10
Match: AT4G31200.2 (SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11
Identity = 43/99 (43.43%), Postives = 51/99 (51.52%), Query Frame = 0


Query: 33  PPSNISPFEVLKRVSKLSK--GE---------------------------GGACIPPPPN 92
           PPS+    EVL+RVSK  K  GE                           GGACIPPPPN
Sbjct: 527 PPSDTPQSEVLERVSKFFKEIGEVNPSEGPMGSESQDDYDNYERDSPQRKGGACIPPPPN 586

Query: 93  VQVDLETGAYAGGDVERK-GSKRLGLEPTTNSNENSDFD 102
           +QVD ETG YA G  ++K GS RLGL  T + NE + +D
Sbjct: 587 LQVDPETGTYADGSTDKKSGSGRLGLGATADPNEPTQYD 625

[Close]

BLAST of CSPI03G44760 vs. TAIR 10
Match: AT4G31200.3 (SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11
Identity = 43/99 (43.43%), Postives = 51/99 (51.52%), Query Frame = 0


Query: 33  PPSNISPFEVLKRVSKLSK--GE---------------------------GGACIPPPPN 92
           PPS+    EVL+RVSK  K  GE                           GGACIPPPPN
Sbjct: 527 PPSDTPQSEVLERVSKFFKEIGEVNPSEGPMGSESQDDYDNYERDSPQRKGGACIPPPPN 586

Query: 93  VQVDLETGAYAGGDVERK-GSKRLGLEPTTNSNENSDFD 102
           +QVD ETG YA G  ++K GS RLGL  T + NE + +D
Sbjct: 587 LQVDPETGTYADGSTDKKSGSGRLGLGATADPNEPTQYD 625

[Close]

BLAST of CSPI03G44760 vs. TAIR 10
Match: AT4G31200.1 (SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11
Identity = 43/99 (43.43%), Postives = 51/99 (51.52%), Query Frame = 0


Query: 33  PPSNISPFEVLKRVSKLSK--GE---------------------------GGACIPPPPN 92
           PPS+    EVL+RVSK  K  GE                           GGACIPPPPN
Sbjct: 527 PPSDTPQSEVLERVSKFFKEIGEVNPSEGPMGSESQDDYDNYERDSPQRKGGACIPPPPN 586

Query: 93  VQVDLETGAYAGGDVERK-GSKRLGLEPTTNSNENSDFD 102
           +QVD ETG YA G  ++K GS RLGL  T + NE + +D
Sbjct: 587 LQVDPETGTYADGSTDKKSGSGRLGLGATADPNEPTQYD 625

The following BLAST results are available for this feature:

BLAST of CSPI03G44760 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G44760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJH0	1.1e-60	95.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G882920 PE=4 SV=1	[more]
A0A6J1DTD5	2.5e-14	53.06	calcium homeostasis endoplasmic reticulum protein OS=Momordica charantia OX=3673...	[more]
A0A0A0KSG0	2.5e-14	53.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G215110 PE=4 SV=1	[more]
A0A6J1IF87	4.3e-14	52.04	calcium homeostasis endoplasmic reticulum protein OS=Cucurbita maxima OX=3661 GN...	[more]
A0A5A7T2P6	5.7e-14	52.04	Calcium homeostasis endoplasmic reticulum protein-like OS=Cucumis melo var. maku...	[more]

BLAST of CSPI03G44760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897955.1	4.0e-14	53.06	calcium homeostasis endoplasmic reticulum protein [Benincasa hispida]	[more]
XP_004148173.1	5.3e-14	53.06	calcium homeostasis endoplasmic reticulum protein [Cucumis sativus] >KGN50691.1 ...	[more]
XP_022157442.1	5.3e-14	53.06	calcium homeostasis endoplasmic reticulum protein [Momordica charantia] >XP_0221...	[more]
XP_022976247.1	9.0e-14	52.04	calcium homeostasis endoplasmic reticulum protein [Cucurbita maxima]	[more]
XP_023536597.1	1.2e-13	52.04	calcium homeostasis endoplasmic reticulum protein isoform X1 [Cucurbita pepo sub...	[more]

BLAST of CSPI03G44760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31200.2	1.5e-11	43.43	SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein	[more]
AT4G31200.3	1.5e-11	43.43	SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein	[more]
AT4G31200.1	1.5e-11	43.43	SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G44760.1	CSPI03G44760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process