Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGACTGTGAACGCAAAGAAGACGGGGAATGTGAACGTCATAGGAGATGAGGAATTTGAGGCTGAAGAAGTCGGTGGCTGTCGAAGTAGTTTGCCAGATGGATTGTCTCCACCGTCCAACGTCCATCTTGGCTATCATGTAGATGATGATCCAACCCTGCGGAGTTGA
mRNA sequence
ATGGTGACTGTGAACGCAAAGAAGACGGGGAATGTGAACGTCATAGGAGATGAGGAATTTGAGGCTGAAGAAGTCGGTGGCTGTCGAAGTAGTTTGCCAGATGGATTGTCTCCACCGTCCAACGTCCATCTTGGCTATCATGTAGATGATGATCCAACCCTGCGGAGTTGA
Coding sequence (CDS)
ATGGTGACTGTGAACGCAAAGAAGACGGGGAATGTGAACGTCATAGGAGATGAGGAATTTGAGGCTGAAGAAGTCGGTGGCTGTCGAAGTAGTTTGCCAGATGGATTGTCTCCACCGTCCAACGTCCATCTTGGCTATCATGTAGATGATGATCCAACCCTGCGGAGTTGA
Protein sequence
MVTVNAKKTGNVNVIGDEEFEAEEVGGCRSSLPDGLSPPSNVHLGYHVDDDPTLRS*
Homology
BLAST of CSPI03G23790 vs. ExPASy TrEMBL
Match:
A0A0A0LBM3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G444550 PE=4 SV=1)
HSP 1 Score: 114.8 bits (286), Expect = 1.2e-22
Identity = 53/56 (94.64%), Postives = 54/56 (96.43%), Query Frame = 0
Query: 1 MVTVNAKKTGNVNVIGDEEFEAEEVGGCRSSLPDGLSPPSNVHLGYHVDDDPTLRS 57
MVTVNAKKTGNVNVIGDEEFEAEEVGGCRSSLPDGLSPP N+HLGYHVDDDPTL S
Sbjct: 1 MVTVNAKKTGNVNVIGDEEFEAEEVGGCRSSLPDGLSPPPNIHLGYHVDDDPTLWS 56
BLAST of CSPI03G23790 vs. ExPASy TrEMBL
Match:
A0A0A0KH57 (AMPKBI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G511020 PE=3 SV=1)
HSP 1 Score: 55.8 bits (133), Expect = 6.7e-05
Identity = 30/52 (57.69%), Postives = 34/52 (65.38%), Query Frame = 0
Query: 1 MVTVNAKKTGNVNVIGDEEFEAEEVGGCRSSLPDGLSPPSNVHLGYHVDDDP 53
M VN ++ + N G EE E EEVGG RSSLPDGLS P + HLGYH D P
Sbjct: 1 MGNVNGREDEDGNPSGAEE-EDEEVGGRRSSLPDGLSVPPDAHLGYHAGDPP 51
BLAST of CSPI03G23790 vs. ExPASy TrEMBL
Match:
A0A5D3CKN6 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00280 PE=3 SV=1)
HSP 1 Score: 55.1 bits (131), Expect = 1.1e-04
Identity = 29/52 (55.77%), Postives = 34/52 (65.38%), Query Frame = 0
Query: 1 MVTVNAKKTGNVNVIGDEEFEAEEVGGCRSSLPDGLSPPSNVHLGYHVDDDP 53
M VN ++ + N G EE E EEVGG RSSLPDGL+ P + HLGYH D P
Sbjct: 1 MGNVNGREDEDGNPSGAEE-EDEEVGGRRSSLPDGLAAPPDAHLGYHAGDPP 51
BLAST of CSPI03G23790 vs. ExPASy TrEMBL
Match:
A0A1S3B352 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo OX=3656 GN=LOC103485228 PE=3 SV=1)
HSP 1 Score: 55.1 bits (131), Expect = 1.1e-04
Identity = 29/52 (55.77%), Postives = 34/52 (65.38%), Query Frame = 0
Query: 1 MVTVNAKKTGNVNVIGDEEFEAEEVGGCRSSLPDGLSPPSNVHLGYHVDDDP 53
M VN ++ + N G EE E EEVGG RSSLPDGL+ P + HLGYH D P
Sbjct: 1 MGNVNGREDEDGNPSGAEE-EDEEVGGRRSSLPDGLAAPPDAHLGYHAGDPP 51
BLAST of CSPI03G23790 vs. NCBI nr
Match:
KGN58027.1 (hypothetical protein Csa_010141 [Cucumis sativus])
HSP 1 Score: 114.8 bits (286), Expect = 2.5e-22
Identity = 53/56 (94.64%), Postives = 54/56 (96.43%), Query Frame = 0
Query: 1 MVTVNAKKTGNVNVIGDEEFEAEEVGGCRSSLPDGLSPPSNVHLGYHVDDDPTLRS 57
MVTVNAKKTGNVNVIGDEEFEAEEVGGCRSSLPDGLSPP N+HLGYHVDDDPTL S
Sbjct: 1 MVTVNAKKTGNVNVIGDEEFEAEEVGGCRSSLPDGLSPPPNIHLGYHVDDDPTLWS 56
BLAST of CSPI03G23790 vs. NCBI nr
Match:
XP_004134805.1 (SNF1-related protein kinase regulatory subunit beta-2 [Cucumis sativus] >KGN49035.1 hypothetical protein Csa_003301 [Cucumis sativus])
HSP 1 Score: 55.8 bits (133), Expect = 1.4e-04
Identity = 30/52 (57.69%), Postives = 34/52 (65.38%), Query Frame = 0
Query: 1 MVTVNAKKTGNVNVIGDEEFEAEEVGGCRSSLPDGLSPPSNVHLGYHVDDDP 53
M VN ++ + N G EE E EEVGG RSSLPDGLS P + HLGYH D P
Sbjct: 1 MGNVNGREDEDGNPSGAEE-EDEEVGGRRSSLPDGLSVPPDAHLGYHAGDPP 51
BLAST of CSPI03G23790 vs. NCBI nr
Match:
XP_008440979.1 (PREDICTED: SNF1-related protein kinase regulatory subunit beta-2-like [Cucumis melo] >TYK12453.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucumis melo var. makuwa])
HSP 1 Score: 55.1 bits (131), Expect = 2.3e-04
Identity = 29/52 (55.77%), Postives = 34/52 (65.38%), Query Frame = 0
Query: 1 MVTVNAKKTGNVNVIGDEEFEAEEVGGCRSSLPDGLSPPSNVHLGYHVDDDP 53
M VN ++ + N G EE E EEVGG RSSLPDGL+ P + HLGYH D P
Sbjct: 1 MGNVNGREDEDGNPSGAEE-EDEEVGGRRSSLPDGLAAPPDAHLGYHAGDPP 51
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LBM3 | 1.2e-22 | 94.64 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G444550 PE=4 SV=1 | [more] |
A0A0A0KH57 | 6.7e-05 | 57.69 | AMPKBI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G511020 PE=3... | [more] |
A0A5D3CKN6 | 1.1e-04 | 55.77 | SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo var. ... | [more] |
A0A1S3B352 | 1.1e-04 | 55.77 | SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo OX=36... | [more] |
Match Name | E-value | Identity | Description | |
KGN58027.1 | 2.5e-22 | 94.64 | hypothetical protein Csa_010141 [Cucumis sativus] | [more] |
XP_004134805.1 | 1.4e-04 | 57.69 | SNF1-related protein kinase regulatory subunit beta-2 [Cucumis sativus] >KGN4903... | [more] |
XP_008440979.1 | 2.3e-04 | 55.77 | PREDICTED: SNF1-related protein kinase regulatory subunit beta-2-like [Cucumis m... | [more] |
Match Name | E-value | Identity | Description | |