CSPI03G22420 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G22420
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNucleolar protein 10
LocationChr3: 18867143 .. 18875830 (+)
RNA-Seq ExpressionCSPI03G22420
SyntenyCSPI03G22420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAGACGCAGTGAAAGATGTCTTGGGTCAAGGATGAAAAAAGTAAGAAACGAAGATAATCCAATCATTATCGATGATTCTGAGGTATATTTAAGATTAATTGATATAATTTGTTACTTTATTGACAAATGCAAATATATTCTAAGTATATTGTATTCATCTATATCATAGGATGAAAAGGGATCATGTTCTAAACAGACTTATGAAGAAAATCAAATGAAATTCAAACATTTACAAATAGTGTACCTATGGGAGGATGAATATGATATATACAAGACCAAATGACTCAAGTTGTTCTGTACGATGAAAACTTAGCAAGTATAAGAAAAACAAAGGTAGAAACGTCAGTTCAAAATATGGAAGCACAAGGAAAAGAGGTTAGTTTAATTGTTTTATATATTTTATAAACATAATGTTAAAGAGTTTAGTTAATATATATGTATATAATGTACTAATATATAGTAGTATATAAAGATGTATACTTAATAGGATGTAACAGGATGTATACTTAGTAATGTACTGATATATGATGTTATATTAGAAATAGGAAGGATCAAAGAACACCGAATTACCCGTAGAAGAAAGTGATGAATCTGACGAGGTATATTCAAATGGAAACAATATTATTTTCTTTATTATTGTTAACTAGTACGAGGTATATTTGAAATATATGATTTATATTTTACAGGATAATGTACCGATATTGAAAAGAAAGTTATATACAGAAATGAAGAAGTCAAAAAGAAATTCTCAACAATCTCAAAAAAAGAAGAGAAAGTTGTCAGATGCGGACAAAGCTAAACAAGGGCATACTGGAAAGAAAAAAAAAATAGAAAAAGATTTGAAAAAAAGTGAAGAGAAACCAAATACAACAAAGAAATCAAAAGTGCAAAAAGAATTGAAAAGAAGTGTAGAATCGAAAAAGGTATAATTTATATATTCTGATATATATCATTAGATGAATTCACTAAATTAAATTTGGTATTGATTATATTGTAATGAATATTTATAATGTTAACAGAAAGCAAATATGAAAAATAAGACTGTAGAAAAGAGGGATGCAAATGAAGATTTAAAGGAGGTATTTTATGTCATACATCATAAATGTATATTTCAAATAGATATCATATATTATTTATATGGTGAAGTATATTGTTTGACGTTGTGAAATAGATATAATAATGCAGGAAAATTAACATGTCTTAATATTAATGTTTGCAGGTTGCACCATTAATCCTGAAAAGGAATAAATGGTATAGAGCACAGAAACTTAGTATATATGCACGTCTAGATGTTATTACAAACATTAAAAAAAAAAACTAAATAGGGAGCAAATAGAGATGTTTAGGAGTTCTCTGTTTGGTAATTTCCTTGATCTAAAAATAACTAAATTCCAAAGTCAATTGCTATTTCATATCATAAGACGACAATGTACCTTGATGAAGGAAGATGGACTTTGGTTCAATTTTGAAGGTAATATAGCTAAGTTTGGAATTATGGAATATGAAGCCATAACTGGTTTGAATTGTGGTCCTTTACCACAAGTGAACATGGAGAAACTGAAGGGTAGATTTTTAGGAAGATATTTCAAAAATGAGGATATTATATCGAGGTCAAGGTTGACATACATCTTCAATGATTCTAAAAAAGTAAAAGATGAAGATAGAGTGAAGTTGGCAAAAATTTATTTCAAAACTAGTATAATGATAAATAATATGTGGTATATATTCAAGGGGAATATTAAAAAACTGGTAAATTCAAAACAGAATAACGTTAAAATAAAAGGAATATTGTTAATATATACTATATATACGCATATGATATATTCAGAATGAACTAATTTTAAATGGATAAAATAACAAATGAGCTGTGGATTTTATCGTATCTTCAGTTGATGGAGAATTGTATATGACGGCGATTTGTTAAGATTCTGCAGCTTACGGTTATGATAAGTTTGAATACAAATTTATAAAACAATGTAATAAGATGGAATAAGAAGTTCAAATGATAGAAAATAATAGCAAAAAAAAAGCTGCCGGCGATGGAGAAGATAATGTAATGGCAGGCGGAGAAAGTGAACAATTAGGTTAAGTTATATTTTTAGAAAAAATAATTAAATAGTTTATTACAAAATAAAATAAAATTAAAAATATTATAATATATTATGATTTATAATTAATTTAAAAGATACTTGAAATTTATTAACATTATGAAATTTATATATTTGAAGCTTCTGATTAAAATAAAGTAATTTTTTAAATAATCTTAAGAATATAATATATATTTAATAATCGTATTATATAATTAATAATTAATGAAAGGTTATAATTGTCAATAAAGTATTATTTTTTCTATTTAAGAAAATAATTTTGAATGTATGATAATTGTGAAATTTCTTAATAAATTTAGGCTTTTTGGGTAAAAGTTTCTTATTTTAATCCAACAATTAAATTTTAATTAACTCTTACAATAACATCCATATAATTTAACATAATTAATAAAATCTCTAAAAAGTGTGGGGTGTTACATTTCTTTTCCTCATGATTATACACCAATATACAATTATCAATTTTTCTTTTAAATAAAATTTATACCTTTTCTTTCTTTCTTTATTCAATCATATCAACGTCTCTATATAATCAATATTTGTATTTCTTCAAATAATTAATTAACTTTCAAAATAATTAATTTTCTATAAATTAAAATTATCATTACTCTTTTCCATAATAATTATATATATAATCACACATATATATATATATGCAATTACCCAATCTCTAACAAACAAATTTCACTATTCCATTTAATTATATAAACCTAAATATATTACATTATTTTATATTTATAATAAATTTATATCTATTAGAATAATTAATAATACAAAATAAATTAATTCACTTTATTATTTATATTTATTATCATATTGGAAATATAATTTTTAAAAATTAAATTAATTATTTATATAATATTATAATAACAATATATTAATTTTATCAATAATATTATTAATGACGATTTTATATTCTAATTTTTTAATACTCAAATTATTTAATTAAATTCAATCTCAAAAACACACAAAATTTAATTCTACTCATTAAATATTCAACTAATAAATATTTAAATTAATTCTAATTTCGCATAATTCTAAATCAAATATTTCAAATTAACGTCGTATACTTTCAACATAATTAAACAAAATAAAGATAATTAAATTCAATATTACAACTTTTTTTAGCGTTACAACTCGAGATATTGGACTCTTATGTCATAATAATAATTAATAACATTTTTTTACTAAATTTCAAAATCTTTAATTAAATATACATACCCATGTATATGTATTTAATTAATCCAATACATTACTCCAAATAAATTCCTTAACTTTTATTAATCTAACACCAAATAAATTCTTTAATTTATAATTCCAATGAATGTAGCACCCATAATAAGTTTTTTAAATTTTTTGGGTGTCAAATAGTTTATGTATTTGGAGTATACATTATTTGAGTTTGAGTTATAATAGCATAAGTTTGTGTTACTGTAAACTATTTTTGTTTGAGAATAAAATAGTAAACATCATATTACATAATAAAAAATGAGAGTAGAATGGTAAAAATGATAGTAAGTAGTAAATACTTAGTTAAGAAGGATTTTGAGATAATACTCATTATTTATAGTTAATGGAAAGTTTTTAAATAGTATTACGAAATGATGTTTTATACAATCTTAGGATAGTTTATAGCCTCAATCACTTTCGAAATGGTATTCTACGCTTTAAATTAATACTAAGGGTATGTTTGGGGGAGGAGTTGGGTTATGTAACCCAACCCATGTTTGGGGGAAGAGTTATCATAACCCTAGTTTTACCCCTAACCCTTCTCCTCAACCATTCTCCAACCATTTCTCAACACTTCTTCATTTATAATTAATTTATTTGTTTTAAATACTATTTTTTTCCTCATTTGTAGTTTCTATATACATTATTAAAATTTTAATTTCTTCCTTTACTCTTGAATTAGATAATTTATTTTAAATTACACAATTAAAATTTTAATTTAATTACCTTCAATCAACTCTACGTTAGAATTCAAAATTAAGATTTTGATATCAATCTCAACTTGATTGTATTTTGTTAATTAGCTTAAATATCTAAGGAATATCAATTCAATAAAAAAAAAAATGGTACAATTTTAACAAATTACCATAAATTAATTACAACAATTAGCAAAATATAAAGACTATTTGATTAAATTTAAAATTAGTGAGGGCCGTAGTTTCAACAAACCTAGAGGTGGTTTGTCTATATTTCGTCACTTTCATAATGTTATTTTGATTATTAAATTAAGTTTTGTTAAATTAACATAACAAATATTTTGTTATAGAGATGATAGATTCATGATTTTTTACCTAATCATTATTGCAGAAAGACTAAAATAAATATTTTGAAAGTATATAAACGACTGTTAAAAATAATAAAAATTAATGTTGATATTTTAAAAGTAGTCTAAAATAAATTGAAGAGAAAACTAAAACAAGATTCATTGTAATTTCCCACCAGAAAACAAAACTAGAGTTGGTAAAAGTCATGATTGTTATTTTCTATTTTCAAGACTTCGTAATTTCGATGGTTATTTGCACTTATTTACATGTTTATAGGTCACGTGTCACATTCATAAAAACCAATTTATTGAAACGTAACGTAAATAAATCAAGGCAACTTATTTGACAAAATCTAGGACAATTTGGTAAATTAAATGAATGAAAATTTTGTTATTGAATTTAGAATATGAATTAAAAAAGAAAATTATTCGCACCTAACGACTACTTAAAAAAGATTGAAAATGAACGTCGTATTTAAAAAAATTAAGGAATTTTTTTTACGAAAACTAGAACGATTTGGTAAATTAAATATATGAAATTTGTGTGATTGATCTAGATAGAATATGGTTTTTTTAAAAAAATATTGCACAAAAGGTTAAAATAAACATTGTATTTAAAGAAATTAAGGCAAATTATTTTACGAAAACTATGACAATTTGATAAATTAAATATACAAAATGTATGTATTAGATTTAGAATATGATTTTTTTTATATAAAAAAACTTATCCGCAAGTAAGGATTACTAAAAAAAATGTTGAGAATGAGCGTCGTATTTAAAGAAGTTTAGACAATTTATTTTACAAAAACTAAGATGATTGAGTAAATTAAGTATAGAAATTTGTGTGTTGGATCTATAATATAAATATAAATATAAAAAATAAAAAATAAAAAATAAAAAATAAAAAATTTCATAACAATACACATATAACCCTTTTCCCAAACATATCTTATTATAACACTATCATAGCCTTTCTCCCAAACACATCTTATCATAACACTTTCTCCATAATCTTTTTCCAAAACACATCGTATCATAATCCTAGCTTTATCATAACACGGTTTATCATAACTCTAACCCTCCATAACTCAACCTTTTCTCAGACAAACCATAAATTCAATTTTAAGAAACCACCCGGTTTGGTCAGCTAACAGGATTAGTAACTAAATTTTCGGTTTAACTATACTGAACCGGTTTAGTATATATACAATTCTAGGTTTTCATTCTTCATTTCAACAGCCGCCCTTCGTCCCTACCTCCCGTTCATTGGCGCGCCCCCGGTCGTTCGTTCTTGGTCTCGCCGCCGTTCGCCTTTTGTTGCACCTCTGTTCATTTCGTCAGTCACTGGTTCCTCACCTTTTCTCTAATCTAATTTGTATAATCAATATCAATAACCCCCCTCCTCCCCCTTTTTTTTACAGGTTGGGTGCCTATCGACGATGTATCTTCAGTTTTACATAAACGAAAATGGTGATAAAGTCTACACCACAAAGGTTTTTATTTCTTGTTTCTTCTTTTGCTCTTTGTGTTGAAGTTAATGGATATCATATCGTTTAGTATTGGGGTTGTACTATTTTTGACAGCGTCTGCTGCGTATCAGATAAGCAGTGTTATATGGGGTCCTTGATTTTTAAGATAGTTAAGGATTGCCGAGTTAATGATCATAAGTTTTGGAGACTGGACTAGTTCTATTTGTGCTGACCTTCCTTAGAAAATTAGCCTACCGTTATTAAGTGCAAGTAATCTGTGTAGTTGCAATTAATTTATGTACCCATGAAATGATTGATTAAATCTATAGGATACCTTTGCTTAGAGTGTCTCAATTTTACAGTAAGTTTCTGTTAAGGCTTTGAGCTTTGTTCCAATAACTTCTAATCCTCCCGTCTTTACTTTACCATATCACGATAGTAGTTTAGAATTCCCTTCGCCCGTTCCTTGACCAAGAAGAAGGAGTTTTAGATTTTAGGCTTTCGATGCCATTCTTTCTCTGCTAATTTGATTGGTAAGTTTCACATTTACCAAGGATGCTCTTTCATTATCACCTGCCATTTCTTGGGAAAAATGTAACAACCTGTCAATTCGAATGTTTTATTGAATGTCATGGAAGTGATTATAACTTAAGGTCAAGGATTCAATCCATTATGGCCGCTCCTAGGAATTTCCTATGAGTTTATTTGACACCAAAATATTGAAGGGTCAGGTGGGTTGCCCCTTAAATTTGTCTGTGTGTGTGTAAGATGACCCGAAAACTCACGGATATAAAAAAAACTGAAAACCAAAGGTAACTAATTTTTACTTGATCGAATAATAAGGCTTAAAATTCAAAGCCAAGTCCATCACCAAAATGTAAAGGACTAGGCAGTGGTATGAATTAACCCAAATACTAAGCACAGAAGCTTAATCTAAAGTAAAAGCTACTTTAATGAAAACTAAAATCATACAATTATGAACCAGCAGATCTTCTTGAATCCCCCCAGAAGACACCAATCCATTAGTCACTGCAAGAACTATTGCTTGCACTTCCATTTGATAAAATTTTATAAATAAAGATGAGTACAAAAATACTAATGTGTAATTTCCTAGCGATTTATAACTTGGACTGTAACCTAAAACTTTCTCTAGACAGTTAGTCTTATTACGTAAACCAGATCCTTGCGTTGATAACCTGGACAGAAACCTCCTCATAGTTCAAATCTTCTTTCACTTGCAATGGTGTATGGCTTAACTTGGGAGACATTTGCAATATACTTCCGAAGTATGGAGGTACGGAAAGTATTATGGATTGAATCTAAGACAGGCAGTAAGGCTAAGCGATATGCCAGTATACCCACCTATTCCAAATTCTCAAAAGTTCCAAAAAGTCTTAGGCTGAGCTTCCCTTTCTTCCCAAAGCTCAAGATTCCTTTCAACGACAAGACTATACCATATATTCAACTTTTAAAATTTAGTTATTTTCTTCTGACTGCTGACTTTGAGCTGTCTTCCTTTTCTACTTAACTGAGTCAAGACCTCATTAGATATTTGCACTGACTCAGGTCCCAAAATCGAGCTCTCTCCCACTTCAGTCTAATTGGTTGGTGACCTACGCTTATCCGTAGGGTGCAATGAAAGGGGCCATTCCGATAGTTGCTTGATAGATATTATTATAACTAAACCGTGTTAGATGGAAAATGTTTGTCCCAGCTGCCCTGGAAGTCCAAAACTTAAACTTGAAGCATATCGTACACTATTTGAACTGTCCTTTCTGACTGACCCATCTGCGGGTGGAACAAGATACTAAACCGTATTAGATGGAAAATGTTTCTCCCAGCTGCCCTGGAAGTCCAAAGCTTAAACTTGAAGCATATCCTACACTATTTGAACTGTCCTTTCTGACTGACCCATCTGCGGGTGGAACAAGATACTGAAATCAAGTCTTGTGTCTAGAGCCTTTTCCATACTTTTCCAAAGTTTGGAAGTGAACTTTGGATCTTGTTCTGACAGTATAGTCTATCAATCTTGTTCTGACACCTTGGATCTTGTTTAGACCAAGTGTCTATAAAATACAACTAAAATAGGTCCTGCACATACGTCTTCACTTGCTTGATAAACTGAGTATCAAAAACAAAACAAAAGAGAAAAACTAGCTTGATAAGCCATTGCTAATTGCCCTTAACTGCTTGTAACTTCTTTTGTGCAGACAATTTTATGCTAACTTGTCTGTTTCGTATTTGTCCTTACCTTGTACAGAAGGAATCTCCTCTAGGTTTGGCCACGCAATCTGCTCATCCAGGTAATTTTTTTTTTTTGCATTATTTGGCTAGTTGTGCCCCACTTCCTTTCACTGACTTGCATAATTAGCAATATCAATGTTCCTGTTAGGGAGAAAGACCATGTTCTAATGTCGTTTTTTCTTATAACAAGGGAATTGGTTGAACATTATACATGGTCTATTTCAGTTGTAATTTTCACTGTGGCTGAGGCTATTGTGAAGATTGGAATTATACATTCGTGAGAATGGAAATGCACCGTTGATATACAACATTTATCATTGTAGAAGAGGATAATATCATTGGTCACTTATCTCTTTAGAGATACCATCGTTTGTTCTCTATCTATATTAATTGAATTAATAAAGATATTGCCTGATAGGCTGCCTCTTCAATGTGGTCATGGTTTTAGCAGTTTTGGGGATTTCTGTTAACCTGTTTTACATTTTCTGACTGCAGCTCGTTTCTCCCCTGATGACAAATATTCGAGGCAAAGAGTTCTTCTTAAGAAGCGATTTGGCTTGCTTCCTACACAGCAGCCACCTCCAAAGTACTGA

mRNA sequence

ATGGTAAGACGCAGTGAAAGATGTCTTGGGTCAAGGATGAAAAAAGTAAGAAACGAAGATAATCCAATCATTATCGATGATTCTGAGGAAGGATCAAAGAACACCGAATTACCCGTAGAAGAAAGTGATGAATCTGACGAGCCGCCCTTCGTCCCTACCTCCCGTTCATTGGCGCGCCCCCGGTCGTTCGTTCTTGGTCTCGCCGCCGTTCGCCTTTTGTTGCACCTCTGTTCATTTCGTCAGTCACTGGTTGGGTGCCTATCGACGATGTATCTTCAGTTTTACATAAACGAAAATGGTGATAAAGTCTACACCACAAAGAAGGAATCTCCTCTAGGTTTGGCCACGCAATCTGCTCATCCAGCTCGTTTCTCCCCTGATGACAAATATTCGAGGCAAAGAGTTCTTCTTAAGAAGCGATTTGGCTTGCTTCCTACACAGCAGCCACCTCCAAAGTACTGA

Coding sequence (CDS)

ATGGTAAGACGCAGTGAAAGATGTCTTGGGTCAAGGATGAAAAAAGTAAGAAACGAAGATAATCCAATCATTATCGATGATTCTGAGGAAGGATCAAAGAACACCGAATTACCCGTAGAAGAAAGTGATGAATCTGACGAGCCGCCCTTCGTCCCTACCTCCCGTTCATTGGCGCGCCCCCGGTCGTTCGTTCTTGGTCTCGCCGCCGTTCGCCTTTTGTTGCACCTCTGTTCATTTCGTCAGTCACTGGTTGGGTGCCTATCGACGATGTATCTTCAGTTTTACATAAACGAAAATGGTGATAAAGTCTACACCACAAAGAAGGAATCTCCTCTAGGTTTGGCCACGCAATCTGCTCATCCAGCTCGTTTCTCCCCTGATGACAAATATTCGAGGCAAAGAGTTCTTCTTAAGAAGCGATTTGGCTTGCTTCCTACACAGCAGCCACCTCCAAAGTACTGA

Protein sequence

MVRRSERCLGSRMKKVRNEDNPIIIDDSEEGSKNTELPVEESDESDEPPFVPTSRSLARPRSFVLGLAAVRLLLHLCSFRQSLVGCLSTMYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY*
Homology
[Close]
BLAST of CSPI03G22420 vs. ExPASy Swiss-Prot
Match: Q93XX8 (H/ACA ribonucleoprotein complex subunit 3-like protein OS=Arabidopsis thaliana OX=3702 GN=At2g20490 PE=3 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 3.0e-25
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 90  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 149
           MYLQ YINE G+KVYTTKKESPLGLAT+SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ  
Sbjct: 1   MYLQCYINEKGEKVYTTKKESPLGLATESAHPARFSPDDKYSKQRVLLKKRFGLLPTQNA 60

Query: 150 PPKY 154
           P +Y
Sbjct: 61  PLQY 64

[Close]
BLAST of CSPI03G22420 vs. ExPASy Swiss-Prot
Match: Q6DRH5 (H/ACA ribonucleoprotein complex subunit 3 OS=Danio rerio OX=7955 GN=nop10 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-19
Identity = 45/62 (72.58%), Postives = 51/62 (82.26%), Query Frame = 0 

Query: 90  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 149
           M+LQFY+NENG++VYT KK  P G  T SAHPARFSPDDK+SR RV +KKRFGLL TQQP
Sbjct: 1   MFLQFYLNENGERVYTLKKVDPSGQPTSSAHPARFSPDDKFSRHRVTIKKRFGLLLTQQP 60

Query: 150 PP 152
            P
Sbjct: 61  RP 62

[Close]
BLAST of CSPI03G22420 vs. ExPASy Swiss-Prot
Match: Q9NPE3 (H/ACA ribonucleoprotein complex subunit 3 OS=Homo sapiens OX=9606 GN=NOP10 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.8e-18
Identity = 42/62 (67.74%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 90  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 149
           M+LQ+Y+NE GD+VYT KK  P+G  T SAHPARFSPDDKYSR R+ +KKRF +L TQQP
Sbjct: 1   MFLQYYLNEQGDRVYTLKKFDPMGQQTCSAHPARFSPDDKYSRHRITIKKRFKVLMTQQP 60

Query: 150 PP 152
            P
Sbjct: 61  RP 62

[Close]
BLAST of CSPI03G22420 vs. ExPASy Swiss-Prot
Match: Q9CQS2 (H/ACA ribonucleoprotein complex subunit 3 OS=Mus musculus OX=10090 GN=Nop10 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.8e-18
Identity = 42/62 (67.74%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 90  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 149
           M+LQ+Y+NE GD+VYT KK  P+G  T SAHPARFSPDDKYSR R+ +KKRF +L TQQP
Sbjct: 1   MFLQYYLNEQGDRVYTLKKFDPMGQQTCSAHPARFSPDDKYSRHRITIKKRFKVLMTQQP 60

Query: 150 PP 152
            P
Sbjct: 61  RP 62

[Close]
BLAST of CSPI03G22420 vs. ExPASy Swiss-Prot
Match: Q9V5P6 (H/ACA ribonucleoprotein complex subunit 3 OS=Drosophila melanogaster OX=7227 GN=CG7637 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.6e-18
Identity = 44/64 (68.75%), Postives = 51/64 (79.69%), Query Frame = 0 

Query: 90  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 149
           MYL + INENGD+VYT KK +  G  T SAHPARFSP+DKYSRQR+ +KKRFGLL TQ+P
Sbjct: 1   MYLMYTINENGDRVYTLKKRTEDGRPTLSAHPARFSPEDKYSRQRLTIKKRFGLLLTQKP 60

Query: 150 PPKY 154
            P Y
Sbjct: 61  EPIY 64

[Close]
BLAST of CSPI03G22420 vs. ExPASy TrEMBL
Match: A0A7J7CYK9 (Nucleolar protein 10 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW12G00152 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.4e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 90  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 149
           MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1   MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 150 PPKY 154
           PPKY
Sbjct: 61  PPKY 64

[Close]
BLAST of CSPI03G22420 vs. ExPASy TrEMBL
Match: A0A2G9GIP1 (Nucleolar protein 10 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22395 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.4e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 90  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 149
           MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1   MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 150 PPKY 154
           PPKY
Sbjct: 61  PPKY 64

[Close]
BLAST of CSPI03G22420 vs. ExPASy TrEMBL
Match: A0A059DDR4 (Nucleolar protein 10 (Fragment) OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A00909 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.3e-28
Identity = 67/80 (83.75%), Postives = 69/80 (86.25%), Query Frame = 0 

Query: 74  LHLCSFRQSLVGCLSTMYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQ 133
           L L  F   LV   + MYLQFYIN+NGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQ
Sbjct: 16  LSLSLFSSCLVFFRAAMYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQ 75

Query: 134 RVLLKKRFGLLPTQQPPPKY 154
           RVLLKKRFGLLPTQQPP KY
Sbjct: 76  RVLLKKRFGLLPTQQPPQKY 95

[Close]
BLAST of CSPI03G22420 vs. ExPASy TrEMBL
Match: M0S1K9 (Nucleolar protein 10 OS=Musa acuminata subsp. malaccensis OX=214687 GN=103992599 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.3e-28
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 90  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 149
           MYLQFYINENGDKVYTTKKESPLG+ATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1   MYLQFYINENGDKVYTTKKESPLGMATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 150 PPKY 154
           PPKY
Sbjct: 61  PPKY 64

[Close]
BLAST of CSPI03G22420 vs. ExPASy TrEMBL
Match: A0A4S8JPA3 (Nucleolar protein 10 OS=Musa balbisiana OX=52838 GN=C4D60_Mb01t23480 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.3e-28
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 90  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 149
           MYLQFYINENGDKVYTTKKESPLG+ATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 22  MYLQFYINENGDKVYTTKKESPLGMATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 81

Query: 150 PPKY 154
           PPKY
Sbjct: 82  PPKY 85

[Close]
BLAST of CSPI03G22420 vs. NCBI nr
Match: KAG6606368.1 (H/ACA ribonucleoprotein complex subunit 3-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 138.7 bits (348), Expect = 4.4e-29
Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0 

Query: 86  CLSTMYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLP 145
           CL+TMYLQFYIN+NGDKVYTTKKESPLGL TQSAHPARFSPDDKYSRQRVLLKKRFGLLP
Sbjct: 22  CLATMYLQFYINDNGDKVYTTKKESPLGLVTQSAHPARFSPDDKYSRQRVLLKKRFGLLP 81

Query: 146 TQQPPPKY 154
           TQ PPPKY
Sbjct: 82  TQHPPPKY 89

[Close]
BLAST of CSPI03G22420 vs. NCBI nr
Match: XP_011651438.1 (H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis sativus] >XP_021665893.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Hevea brasiliensis] >XP_027352960.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Abrus precatorius] >XP_031738537.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis sativus] >XP_038718649.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Tripterygium wilfordii] >PIN05065.1 H/ACA snoRNP complex, subunit NOP10 [Handroanthus impetiginosus] >KAE8650652.1 hypothetical protein Csa_011605 [Cucumis sativus] >KAF5738956.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Tripterygium wilfordii])

HSP 1 Score: 136.0 bits (341), Expect = 2.8e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 90  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 149
           MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1   MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 150 PPKY 154
           PPKY
Sbjct: 61  PPKY 64

[Close]
BLAST of CSPI03G22420 vs. NCBI nr
Match: THU64153.1 (hypothetical protein C4D60_Mb01t23480 [Musa balbisiana])

HSP 1 Score: 135.2 bits (339), Expect = 4.8e-28
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 90  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 149
           MYLQFYINENGDKVYTTKKESPLG+ATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 22  MYLQFYINENGDKVYTTKKESPLGMATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 81

Query: 150 PPKY 154
           PPKY
Sbjct: 82  PPKY 85

[Close]
BLAST of CSPI03G22420 vs. NCBI nr
Match: KCW88531.1 (hypothetical protein EUGRSUZ_A00909, partial [Eucalyptus grandis])

HSP 1 Score: 135.2 bits (339), Expect = 4.8e-28
Identity = 67/80 (83.75%), Postives = 69/80 (86.25%), Query Frame = 0 

Query: 74  LHLCSFRQSLVGCLSTMYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQ 133
           L L  F   LV   + MYLQFYIN+NGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQ
Sbjct: 16  LSLSLFSSCLVFFRAAMYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQ 75

Query: 134 RVLLKKRFGLLPTQQPPPKY 154
           RVLLKKRFGLLPTQQPP KY
Sbjct: 76  RVLLKKRFGLLPTQQPPQKY 95

[Close]
BLAST of CSPI03G22420 vs. NCBI nr
Match: XP_009410656.1 (PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Musa acuminata subsp. malaccensis] >XP_009410663.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Musa acuminata subsp. malaccensis] >CAG1859462.1 unnamed protein product [Musa acuminata subsp. malaccensis])

HSP 1 Score: 135.2 bits (339), Expect = 4.8e-28
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 90  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 149
           MYLQFYINENGDKVYTTKKESPLG+ATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1   MYLQFYINENGDKVYTTKKESPLGMATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 150 PPKY 154
           PPKY
Sbjct: 61  PPKY 64

[Close]
BLAST of CSPI03G22420 vs. TAIR 10
Match: AT2G20490.1 (nucleolar RNA-binding Nop10p family protein )

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-26
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 90  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 149
           MYLQ YINE G+KVYTTKKESPLGLAT+SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ  
Sbjct: 1   MYLQCYINEKGEKVYTTKKESPLGLATESAHPARFSPDDKYSKQRVLLKKRFGLLPTQNA 60

Query: 150 PPKY 154
           P +Y
Sbjct: 61  PLQY 64

[Close]
BLAST of CSPI03G22420 vs. TAIR 10
Match: AT2G20490.2 (nucleolar RNA-binding Nop10p family protein )

HSP 1 Score: 109.8 bits (273), Expect = 2.0e-24
Identity = 54/64 (84.38%), Postives = 58/64 (90.62%), Query Frame = 0 

Query: 90  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 149
           MYLQ YINE G+KVYTT KESPLGLAT+SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ  
Sbjct: 1   MYLQCYINEKGEKVYTT-KESPLGLATESAHPARFSPDDKYSKQRVLLKKRFGLLPTQNA 60

Query: 150 PPKY 154
           P +Y
Sbjct: 61  PLQY 63

The following BLAST results are available for this feature:
BLAST of CSPI03G22420 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93XX83.0e-2585.94H/ACA ribonucleoprotein complex subunit 3-like protein OS=Arabidopsis thaliana O... [more]
Q6DRH51.1e-1972.58H/ACA ribonucleoprotein complex subunit 3 OS=Danio rerio OX=7955 GN=nop10 PE=3 S... [more]
Q9NPE32.8e-1867.74H/ACA ribonucleoprotein complex subunit 3 OS=Homo sapiens OX=9606 GN=NOP10 PE=1 ... [more]
Q9CQS22.8e-1867.74H/ACA ribonucleoprotein complex subunit 3 OS=Mus musculus OX=10090 GN=Nop10 PE=3... [more]
Q9V5P63.6e-1868.75H/ACA ribonucleoprotein complex subunit 3 OS=Drosophila melanogaster OX=7227 GN=... [more]
BLAST of CSPI03G22420 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7J7CYK91.4e-28100.00Nucleolar protein 10 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW12G00152 PE=... [more]
A0A2G9GIP11.4e-28100.00Nucleolar protein 10 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22395 PE=3... [more]
A0A059DDR42.3e-2883.75Nucleolar protein 10 (Fragment) OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A00909... [more]
M0S1K92.3e-2898.44Nucleolar protein 10 OS=Musa acuminata subsp. malaccensis OX=214687 GN=103992599... [more]
A0A4S8JPA32.3e-2898.44Nucleolar protein 10 OS=Musa balbisiana OX=52838 GN=C4D60_Mb01t23480 PE=3 SV=1[more]
BLAST of CSPI03G22420 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6606368.14.4e-2994.12H/ACA ribonucleoprotein complex subunit 3-like protein, partial [Cucurbita argyr... [more]
XP_011651438.12.8e-28100.00H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis sativus] >XP_021... [more]
THU64153.14.8e-2898.44hypothetical protein C4D60_Mb01t23480 [Musa balbisiana][more]
KCW88531.14.8e-2883.75hypothetical protein EUGRSUZ_A00909, partial [Eucalyptus grandis][more]
XP_009410656.14.8e-2898.44PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Musa acuminat... [more]
BLAST of CSPI03G22420 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G20490.12.2e-2685.94nucleolar RNA-binding Nop10p family protein [more]
AT2G20490.22.0e-2484.38nucleolar RNA-binding Nop10p family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.28.40H/ACA ribonucleoprotein complex, subunit Nop10coord: 99..143
e-value: 1.4E-13
score: 52.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..54
NoneNo IPR availablePANTHERPTHR13305:SF2H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 3-LIKE PROTEINcoord: 90..153
IPR007264H/ACA ribonucleoprotein complex, subunit Nop10PFAMPF04135Nop10pcoord: 92..141
e-value: 1.6E-18
score: 66.5
IPR007264H/ACA ribonucleoprotein complex, subunit Nop10PANTHERPTHR13305RIBOSOME BIOGENESIS PROTEIN NOP10coord: 90..153
IPR036756H/ACA ribonucleoprotein complex, subunit Nop10 superfamilySUPERFAMILY144210Nop10-like SnoRNPcoord: 92..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G22420.1CSPI03G22420.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010197 polar nucleus fusion
biological_process GO:0031118 rRNA pseudouridine synthesis
biological_process GO:0031120 snRNA pseudouridine synthesis
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0031429 box H/ACA snoRNP complex
cellular_component GO:0090661 box H/ACA telomerase RNP complex
cellular_component GO:0015030 Cajal body
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0034513 box H/ACA snoRNA binding
molecular_function GO:0070034 telomerase RNA binding
molecular_function GO:0030515 snoRNA binding