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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAAACAGAACAGGGGGAGCAGATAGAGAACAGTCCTCAAAAGCGGGGAAAGGGAAGTGAAAGAGGGGGATTGAACCGGGGTGGACGAGGTCTTGTGATCACGATAACCAAGAGAATGAAGCTCGAGGCGACGCCCCTGAAAGCTTTTTTTCTGCAAAACCCAAGAGAGAAAATGAAAGGGGATATGCAGTTGCAGGGAGAGCGTGAAGGATGG mRNA sequence ATGGAAACAGAACAGGGGGAGCAGATAGAGAACAGTCCTCAAAAGCGGGGAAAGGGAAGTGAAAGAGGGGGATTGAACCGGGGTGGACGAGGTCTTGTGATCACGATAACCAAGAGAATGAAGCTCGAGGCGACGCCCCTGAAAGCTTTTTTTCTGCAAAACCCAAGAGAGAAAATGAAAGGGGATATGCAGTTGCAGGGAGAGCGTGAAGGATGG Coding sequence (CDS) ATGGAAACAGAACAGGGGGAGCAGATAGAGAACAGTCCTCAAAAGCGGGGAAAGGGAAGTGAAAGAGGGGGATTGAACCGGGGTGGACGAGGTCTTGTGATCACGATAACCAAGAGAATGAAGCTCGAGGCGACGCCCCTGAAAGCTTTTTTTCTGCAAAACCCAAGAGAGAAAATGAAAGGGGATATGCAGTTGCAGGGAGAGCGTGAAGGATGG Protein sequence METEQGEQIENSPQKRGKGSERGGLNRGGRGLVITITKRMKLEATPLKAFFLQNPREKMKGDMQLQGEREGW
Homology
BLAST of CSPI03G20300 vs. ExPASy TrEMBL
Match: A0A0A0LCC9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258130 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 2.0e-30 Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0
Query: 1 METEQGEQIENSPQKRGKGSERGGLNRGGRGLVITITKRMKLEATPLKAFFLQNPREKMK 60
METEQ EQIENSPQKRGKGSERGGLNRGGRGLVITITKRMKLEATPLKAFFLQNPREKMK
Sbjct: 1 METEQREQIENSPQKRGKGSERGGLNRGGRGLVITITKRMKLEATPLKAFFLQNPREKMK 60
Query: 61 GDMQLQGEREGW 73
GDMQLQGEREGW
Sbjct: 61 GDMQLQGEREGW 72
BLAST of CSPI03G20300 vs. NCBI nr
Match: KGN57711.1 (hypothetical protein Csa_011116 [Cucumis sativus]) HSP 1 Score: 141.0 bits (354), Expect = 4.1e-30 Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0
Query: 1 METEQGEQIENSPQKRGKGSERGGLNRGGRGLVITITKRMKLEATPLKAFFLQNPREKMK 60
METEQ EQIENSPQKRGKGSERGGLNRGGRGLVITITKRMKLEATPLKAFFLQNPREKMK
Sbjct: 1 METEQREQIENSPQKRGKGSERGGLNRGGRGLVITITKRMKLEATPLKAFFLQNPREKMK 60
Query: 61 GDMQLQGEREGW 73
GDMQLQGEREGW
Sbjct: 61 GDMQLQGEREGW 72
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LCC9 | 2.0e-30 | 98.61 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258130 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN57711.1 | 4.1e-30 | 98.61 | hypothetical protein Csa_011116 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 9..23 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..30 |
Relationships
The following mRNA feature(s) are a part of this gene:
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