Homology
BLAST of CSPI03G03700 vs. ExPASy Swiss-Prot
Match:
Q921X6 (DNA-directed RNA polymerase III subunit RPC6 OS=Mus musculus OX=10090 GN=Polr3f PE=1 SV=1)
HSP 1 Score: 110.5 bits (275), Expect = 2.6e-23
Identity = 72/232 (31.03%), Postives = 117/232 (50.43%), Query Frame = 0
Query: 30 QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFY 89
QEK++Y +I + GI + D++ ++ + + K LK+L++K LIK V+ KK Y
Sbjct: 91 QEKLVYQIIEDAGNKGIWSRDIRYKSNLPLTEINKILKNLESKKLIKAVKSVAASKKKVY 150
Query: 90 LSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEG----IVE---SF 149
+ + +P + +TGG WY D + + +++ L Q C + +Q K E +++ SF
Sbjct: 151 MLYNLQPDRSVTGGAWYSDQDFESEFVEVLNQQCFKFLQSKAETARESKQNPVIQRNSSF 210
Query: 150 KQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICY 209
S G KVELS E IE I+N L+ D +V M + ++ G + Y
Sbjct: 211 ASSHEVWKYICELGISKVELSMEDIETILNTLIYDGKVEMTIIAAKEGTVGSVDGHMKLY 270
Query: 210 KYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF 244
+ P TG + + PCG+CP C G ISP+ C+Y T+WL+F
Sbjct: 271 RAVN-----PILPPTGVVRA-PCGLCPVFEDCHEGGEISPSNCIYMTEWLEF 316
BLAST of CSPI03G03700 vs. ExPASy Swiss-Prot
Match:
Q2T9S3 (DNA-directed RNA polymerase III subunit RPC6 OS=Bos taurus OX=9913 GN=POLR3F PE=2 SV=1)
HSP 1 Score: 110.2 bits (274), Expect = 3.4e-23
Identity = 72/232 (31.03%), Postives = 114/232 (49.14%), Query Frame = 0
Query: 30 QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFY 89
QEK++Y +I + GI + D++ ++ + + K LK+L++K LIK V+ KK Y
Sbjct: 91 QEKLVYQIIEDAGNKGIWSRDIRYKSNLPLTEINKILKNLESKKLIKAVKSVAASKKKVY 150
Query: 90 LSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIV-------ESF 149
+ + +P + +TGG WY D + + +++ L Q C + +Q K E SF
Sbjct: 151 MLYNLQPDRSVTGGAWYSDQDFESEFVEVLNQQCFKFLQNKAETARESKQNPMIQRNSSF 210
Query: 150 KQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICY 209
S G KVELS E IE I+N L+ D +V M + ++ G + Y
Sbjct: 211 ASSHEVWKYICELGISKVELSMEDIETILNTLIYDGKVEMTIIAAKEGTVGSVDGHMKLY 270
Query: 210 KYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF 244
+ + P TG + PCG+CP C G ISP+ C+Y T+WL+F
Sbjct: 271 RAVS-----PIIPPTG-LVRAPCGLCPVFDDCHEGGEISPSNCIYMTEWLEF 316
BLAST of CSPI03G03700 vs. ExPASy Swiss-Prot
Match:
Q9H1D9 (DNA-directed RNA polymerase III subunit RPC6 OS=Homo sapiens OX=9606 GN=POLR3F PE=1 SV=1)
HSP 1 Score: 109.4 bits (272), Expect = 5.9e-23
Identity = 72/232 (31.03%), Postives = 113/232 (48.71%), Query Frame = 0
Query: 30 QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFY 89
QEK++Y +I + GI + D++ ++ + + K LK+L++K LIK V+ KK Y
Sbjct: 91 QEKLVYQIIEDAGNKGIWSRDIRYKSNLPLTEINKILKNLESKKLIKAVKSVAASKKKVY 150
Query: 90 LSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIV-------ESF 149
+ + +P + +TGG WY D + + +++ L Q C + +Q K E SF
Sbjct: 151 MLYNLQPDRSVTGGAWYSDQDFESEFVEVLNQQCFKFLQSKAETARESKQNPMIQRNSSF 210
Query: 150 KQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICY 209
S G KVELS E IE I+N L+ D +V M + ++ G + Y
Sbjct: 211 ASSHEVWKYICELGISKVELSMEDIETILNTLIYDGKVEMTIIAAKEGTVGSVDGHMKLY 270
Query: 210 KYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF 244
+ P TG + PCG+CP C G ISP+ C+Y T+WL+F
Sbjct: 271 RAVN-----PIIPPTG-LVRAPCGLCPVFDDCHEGGEISPSNCIYMTEWLEF 316
BLAST of CSPI03G03700 vs. ExPASy Swiss-Prot
Match:
Q86JM3 (DNA-directed RNA polymerase III subunit rpc6 OS=Dictyostelium discoideum OX=44689 GN=polr3f PE=3 SV=1)
HSP 1 Score: 105.1 bits (261), Expect = 1.1e-21
Identity = 67/244 (27.46%), Postives = 119/244 (48.77%), Query Frame = 0
Query: 1 MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 60
++ S+ +S K P+ K G ++ ++Y LI + + G T ++K + + +
Sbjct: 52 IQNSDETTSYKEVNPEDQAKFRGLGV---EDFLIYQLIEASSNTGAWTRELKNSSGYQQV 111
Query: 61 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 120
+TK LK+L+++ LIK V+ Q+ KK Y+ + EP++E+TGG Y D D YI +K
Sbjct: 112 QITKILKTLESRKLIKSVKSIQSGRKKVYMLYNMEPSREITGGQLYSDQSYDHQYIQIMK 171
Query: 121 QVCARMIQRKKLMTIEGIVESFKQ--SGAFKVELSREQIEEIVNALVLDNQVMEVKSSGF 180
+ K + + I+ ++ A L E I+ +VN ++ D + E++ +
Sbjct: 172 MHIKTFVDNKGAVDLADIITYLRKVAEEATSQSLGPEDIQALVNTVIYDGDIEEMRDTRM 231
Query: 181 GEFEFIPIGKICYKYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYT 240
G G I YK K ++PCG CP C+ NG++SP CVY+
Sbjct: 232 GAMLGRRSG-ILYK------PTKTPIPVNNFCNMPCGNCPVFDICSDNGLVSPKRCVYFK 285
Query: 241 KWLD 243
++L+
Sbjct: 292 QYLE 285
BLAST of CSPI03G03700 vs. ExPASy Swiss-Prot
Match:
Q9VD25 (Probable DNA-directed RNA polymerase III subunit RPC6 OS=Drosophila melanogaster OX=7227 GN=CG5380 PE=2 SV=1)
HSP 1 Score: 101.3 bits (251), Expect = 1.6e-20
Identity = 63/230 (27.39%), Postives = 104/230 (45.22%), Query Frame = 0
Query: 30 QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFY 89
+EKV+Y ++ + GI D++ ++ + K LK+L+TK LIK V+ KK Y
Sbjct: 79 EEKVVYGIVEEGGNKGIWIRDIRMKSNLNMIQLNKILKNLETKKLIKAVKSVNASKKKVY 138
Query: 90 LSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQRKK-----------------L 149
+ + EP +TGG WY+D + + ++++ L Q C R +Q K+
Sbjct: 139 MLYNLEPDLSITGGAWYQDQDFEVEFVDVLNQQCLRFLQMKRDSAEKKREGPLAFKQMSC 198
Query: 150 MTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYK 209
T+ + + G KV L+ +E I+ +V D V+ G F + +
Sbjct: 199 CTVNEVQKFISDLGISKVNLAEADLETILKTVVYDGNAERVRQQD-GSFVYRAVNAPL-- 258
Query: 210 YCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLD 243
P TG + +PCG+CP I C+ G ++ TC Y WLD
Sbjct: 259 -----------PPTG-LVQMPCGICPVIKNCSNCGDVTAITCEYMRDWLD 293
BLAST of CSPI03G03700 vs. ExPASy TrEMBL
Match:
A0A0A0L5W6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G043930 PE=3 SV=1)
HSP 1 Score: 495.0 bits (1273), Expect = 1.8e-136
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0
Query: 1 MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 60
MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES
Sbjct: 1 MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 60
Query: 61 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 120
VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK
Sbjct: 61 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 120
Query: 121 QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE 180
QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE
Sbjct: 121 QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE 180
Query: 181 FEFIPIGKICYKYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKW 240
FEFIPIGKICYKYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKW
Sbjct: 181 FEFIPIGKICYKYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKW 240
Query: 241 LDF 244
LDF
Sbjct: 241 LDF 243
BLAST of CSPI03G03700 vs. ExPASy TrEMBL
Match:
A0A1S3BL06 (DNA-directed RNA polymerase III subunit rpc6-like OS=Cucumis melo OX=3656 GN=LOC103490992 PE=3 SV=1)
HSP 1 Score: 489.2 bits (1258), Expect = 1.0e-134
Identity = 240/243 (98.77%), Postives = 241/243 (99.18%), Query Frame = 0
Query: 1 MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 60
M KS+GPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES
Sbjct: 1 MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 60
Query: 61 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 120
VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK
Sbjct: 61 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 120
Query: 121 QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE 180
QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE
Sbjct: 121 QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE 180
Query: 181 FEFIPIGKICYKYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKW 240
FEFIPIGKICYKYCTQGGGLKGEPK GAMASIPCGVCPRITYCTPNGIISPATCVYYTKW
Sbjct: 181 FEFIPIGKICYKYCTQGGGLKGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKW 240
Query: 241 LDF 244
LDF
Sbjct: 241 LDF 243
BLAST of CSPI03G03700 vs. ExPASy TrEMBL
Match:
A0A5D3D7H7 (DNA-directed RNA polymerase III subunit rpc6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00330 PE=3 SV=1)
HSP 1 Score: 489.2 bits (1258), Expect = 1.0e-134
Identity = 240/243 (98.77%), Postives = 241/243 (99.18%), Query Frame = 0
Query: 1 MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 60
M KS+GPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES
Sbjct: 5 MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 64
Query: 61 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 120
VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK
Sbjct: 65 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 124
Query: 121 QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE 180
QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE
Sbjct: 125 QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE 184
Query: 181 FEFIPIGKICYKYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKW 240
FEFIPIGKICYKYCTQGGGLKGEPK GAMASIPCGVCPRITYCTPNGIISPATCVYYTKW
Sbjct: 185 FEFIPIGKICYKYCTQGGGLKGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKW 244
Query: 241 LDF 244
LDF
Sbjct: 245 LDF 247
BLAST of CSPI03G03700 vs. ExPASy TrEMBL
Match:
A0A5D3CS47 (DNA-directed RNA polymerase III subunit RPC6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006860 PE=3 SV=1)
HSP 1 Score: 472.2 bits (1214), Expect = 1.3e-129
Identity = 234/243 (96.30%), Postives = 238/243 (97.94%), Query Frame = 0
Query: 1 MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 60
M KS+GPSSLKRKRPDL TKNSS GALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES
Sbjct: 117 MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 176
Query: 61 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 120
VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK
Sbjct: 177 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 236
Query: 121 QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE 180
QVCARMIQRKKLMTIEGIVESFKQSGAFKVEL+REQIEEIVNALVLDNQV EVKSSGFGE
Sbjct: 237 QVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGE 296
Query: 181 FEFIPIGKICYKYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKW 240
FEFIPIGKICYKYC+Q GGLKGEPKTGAMASIPCGVCPRIT+CTPNGIISPATCVYYTKW
Sbjct: 297 FEFIPIGKICYKYCSQ-GGLKGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKW 356
Query: 241 LDF 244
LDF
Sbjct: 357 LDF 358
BLAST of CSPI03G03700 vs. ExPASy TrEMBL
Match:
A0A5A7UBI4 (DNA-directed RNA polymerase III subunit RPC6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003590 PE=3 SV=1)
HSP 1 Score: 472.2 bits (1214), Expect = 1.3e-129
Identity = 234/243 (96.30%), Postives = 238/243 (97.94%), Query Frame = 0
Query: 1 MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 60
M KS+GPSSLKRKRPDL TKNSS GALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES
Sbjct: 117 MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 176
Query: 61 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 120
VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK
Sbjct: 177 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 236
Query: 121 QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE 180
QVCARMIQRKKLMTIEGIVESFKQSGAFKVEL+REQIEEIVNALVLDNQV EVKSSGFGE
Sbjct: 237 QVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGE 296
Query: 181 FEFIPIGKICYKYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKW 240
FEFIPIGKICYKYC+Q GGLKGEPKTGAMASIPCGVCPRIT+CTPNGIISPATCVYYTKW
Sbjct: 297 FEFIPIGKICYKYCSQ-GGLKGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKW 356
Query: 241 LDF 244
LDF
Sbjct: 357 LDF 358
BLAST of CSPI03G03700 vs. NCBI nr
Match:
XP_004148278.1 (DNA-directed RNA polymerase III subunit RPC6 [Cucumis sativus] >KGN55977.1 hypothetical protein Csa_010347 [Cucumis sativus])
HSP 1 Score: 495.0 bits (1273), Expect = 3.8e-136
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0
Query: 1 MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 60
MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES
Sbjct: 1 MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 60
Query: 61 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 120
VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK
Sbjct: 61 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 120
Query: 121 QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE 180
QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE
Sbjct: 121 QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE 180
Query: 181 FEFIPIGKICYKYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKW 240
FEFIPIGKICYKYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKW
Sbjct: 181 FEFIPIGKICYKYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKW 240
Query: 241 LDF 244
LDF
Sbjct: 241 LDF 243
BLAST of CSPI03G03700 vs. NCBI nr
Match:
TYK19400.1 (DNA-directed RNA polymerase III subunit rpc6-like [Cucumis melo var. makuwa])
HSP 1 Score: 489.2 bits (1258), Expect = 2.1e-134
Identity = 240/243 (98.77%), Postives = 241/243 (99.18%), Query Frame = 0
Query: 1 MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 60
M KS+GPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES
Sbjct: 5 MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 64
Query: 61 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 120
VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK
Sbjct: 65 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 124
Query: 121 QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE 180
QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE
Sbjct: 125 QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE 184
Query: 181 FEFIPIGKICYKYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKW 240
FEFIPIGKICYKYCTQGGGLKGEPK GAMASIPCGVCPRITYCTPNGIISPATCVYYTKW
Sbjct: 185 FEFIPIGKICYKYCTQGGGLKGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKW 244
Query: 241 LDF 244
LDF
Sbjct: 245 LDF 247
BLAST of CSPI03G03700 vs. NCBI nr
Match:
XP_008448982.1 (PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Cucumis melo] >XP_008448983.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Cucumis melo])
HSP 1 Score: 489.2 bits (1258), Expect = 2.1e-134
Identity = 240/243 (98.77%), Postives = 241/243 (99.18%), Query Frame = 0
Query: 1 MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 60
M KS+GPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES
Sbjct: 1 MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 60
Query: 61 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 120
VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK
Sbjct: 61 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 120
Query: 121 QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE 180
QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE
Sbjct: 121 QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE 180
Query: 181 FEFIPIGKICYKYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKW 240
FEFIPIGKICYKYCTQGGGLKGEPK GAMASIPCGVCPRITYCTPNGIISPATCVYYTKW
Sbjct: 181 FEFIPIGKICYKYCTQGGGLKGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKW 240
Query: 241 LDF 244
LDF
Sbjct: 241 LDF 243
BLAST of CSPI03G03700 vs. NCBI nr
Match:
TYK13079.1 (DNA-directed RNA polymerase III subunit RPC6-like [Cucumis melo var. makuwa])
HSP 1 Score: 472.2 bits (1214), Expect = 2.6e-129
Identity = 234/243 (96.30%), Postives = 238/243 (97.94%), Query Frame = 0
Query: 1 MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 60
M KS+GPSSLKRKRPDL TKNSS GALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES
Sbjct: 117 MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 176
Query: 61 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 120
VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK
Sbjct: 177 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 236
Query: 121 QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE 180
QVCARMIQRKKLMTIEGIVESFKQSGAFKVEL+REQIEEIVNALVLDNQV EVKSSGFGE
Sbjct: 237 QVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGE 296
Query: 181 FEFIPIGKICYKYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKW 240
FEFIPIGKICYKYC+Q GGLKGEPKTGAMASIPCGVCPRIT+CTPNGIISPATCVYYTKW
Sbjct: 297 FEFIPIGKICYKYCSQ-GGLKGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKW 356
Query: 241 LDF 244
LDF
Sbjct: 357 LDF 358
BLAST of CSPI03G03700 vs. NCBI nr
Match:
XP_008439941.1 (PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Cucumis melo])
HSP 1 Score: 472.2 bits (1214), Expect = 2.6e-129
Identity = 234/243 (96.30%), Postives = 238/243 (97.94%), Query Frame = 0
Query: 1 MRKSEGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 60
M KS+GPSSLKRKRPDL TKNSS GALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES
Sbjct: 1 MSKSQGPSSLKRKRPDLSTKNSSVGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAES 60
Query: 61 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 120
VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK
Sbjct: 61 VVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLK 120
Query: 121 QVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGE 180
QVCARMIQRKKLMTIEGIVESFKQSGAFKVEL+REQIEEIVNALVLDNQV EVKSSGFGE
Sbjct: 121 QVCARMIQRKKLMTIEGIVESFKQSGAFKVELTREQIEEIVNALVLDNQVTEVKSSGFGE 180
Query: 181 FEFIPIGKICYKYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKW 240
FEFIPIGKICYKYC+Q GGLKGEPKTGAMASIPCGVCPRIT+CTPNGIISPATCVYYTKW
Sbjct: 181 FEFIPIGKICYKYCSQ-GGLKGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKW 240
Query: 241 LDF 244
LDF
Sbjct: 241 LDF 242
BLAST of CSPI03G03700 vs. TAIR 10
Match:
AT5G23710.1 (DNA binding;DNA-directed RNA polymerases )
HSP 1 Score: 204.1 bits (518), Expect = 1.2e-52
Identity = 110/235 (46.81%), Postives = 148/235 (62.98%), Query Frame = 0
Query: 11 KRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQ 70
KRKRPD K+S G EK L DLI Q G F++KRE ++VT+ + SL+
Sbjct: 3 KRKRPD--PKSSGGDLNEPHEKKLLDLIRINQGRGATMFELKREKTIPATIVTRLIASLR 62
Query: 71 TKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQ-- 130
K LIK V + NKG K YL+ +FEP ELTGG WY DG LD I LK C +++
Sbjct: 63 KKNLIKEVANMNNKGVKHYLAMEFEPCSELTGGEWYTDGALDLSKIEDLKAKCVMILERH 122
Query: 131 RKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGK 190
R++++T+E + F + + +LS +Q +EI+ L+LDN +MEVKS+G EF IG+
Sbjct: 123 RQRVVTLEVLCGYFVK----EEKLSVDQTKEILKNLILDNLIMEVKSNGMNEFASTRIGE 182
Query: 191 ICYKYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF 244
+CY+ + G GEP+ GA ASIPCGVCP I C+P+G+ISP TCVY+ KWLDF
Sbjct: 183 VCYRLTGKKFG-NGEPRAGAFASIPCGVCPHIAICSPDGVISPTTCVYFQKWLDF 230
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q921X6 | 2.6e-23 | 31.03 | DNA-directed RNA polymerase III subunit RPC6 OS=Mus musculus OX=10090 GN=Polr3f ... | [more] |
Q2T9S3 | 3.4e-23 | 31.03 | DNA-directed RNA polymerase III subunit RPC6 OS=Bos taurus OX=9913 GN=POLR3F PE=... | [more] |
Q9H1D9 | 5.9e-23 | 31.03 | DNA-directed RNA polymerase III subunit RPC6 OS=Homo sapiens OX=9606 GN=POLR3F P... | [more] |
Q86JM3 | 1.1e-21 | 27.46 | DNA-directed RNA polymerase III subunit rpc6 OS=Dictyostelium discoideum OX=4468... | [more] |
Q9VD25 | 1.6e-20 | 27.39 | Probable DNA-directed RNA polymerase III subunit RPC6 OS=Drosophila melanogaster... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L5W6 | 1.8e-136 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G043930 PE=3 SV=1 | [more] |
A0A1S3BL06 | 1.0e-134 | 98.77 | DNA-directed RNA polymerase III subunit rpc6-like OS=Cucumis melo OX=3656 GN=LOC... | [more] |
A0A5D3D7H7 | 1.0e-134 | 98.77 | DNA-directed RNA polymerase III subunit rpc6-like OS=Cucumis melo var. makuwa OX... | [more] |
A0A5D3CS47 | 1.3e-129 | 96.30 | DNA-directed RNA polymerase III subunit RPC6-like OS=Cucumis melo var. makuwa OX... | [more] |
A0A5A7UBI4 | 1.3e-129 | 96.30 | DNA-directed RNA polymerase III subunit RPC6-like OS=Cucumis melo var. makuwa OX... | [more] |
Match Name | E-value | Identity | Description | |
XP_004148278.1 | 3.8e-136 | 100.00 | DNA-directed RNA polymerase III subunit RPC6 [Cucumis sativus] >KGN55977.1 hypot... | [more] |
TYK19400.1 | 2.1e-134 | 98.77 | DNA-directed RNA polymerase III subunit rpc6-like [Cucumis melo var. makuwa] | [more] |
XP_008448982.1 | 2.1e-134 | 98.77 | PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Cucumis melo] >XP_... | [more] |
TYK13079.1 | 2.6e-129 | 96.30 | DNA-directed RNA polymerase III subunit RPC6-like [Cucumis melo var. makuwa] | [more] |
XP_008439941.1 | 2.6e-129 | 96.30 | PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
AT5G23710.1 | 1.2e-52 | 46.81 | DNA binding;DNA-directed RNA polymerases | [more] |