CSPI02G15660 (gene) Cucumber (PI 183967) v1

InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Position :
0
Zoom :
x 1
ATGAATAGCTCAATAGTTCAACTTTTAGCTTCCGAAAAACTTAATGGCGATAATTATGCGGCTTGGAAATCAAATCTTAACACAATACTAGTGGTTGACGATTTAAGATTTGTCTTAACTGAGGAATGTCCTCAAAACCCTGCCTCTAATGCTAACCGAACTAGTCGGGATGCATATGATCGATGGATAAAAGCTAATGAAAAAGCCCGTGTCTACATTCTTGCCAGCATGTCTGATGTATTGGCAAAGAAACATGAATCCTTAGCCACGGCTAAAGAGATTATGGATTCATTAAGGGGAATGTTTGGGCAACCAGAATGGTCCTTAAGACACGAGGCAGTCAAATACATTTACACTAAGCGTATGAAGGAAGGGACCTCTGTTAGAGAACATGTTCTGGACATGATGATGCACTTCAACATCGCTGAAGTGAATGGTGGTCCCATCGAAGAGGTTAATCAAGTTAGTTTTATCTTAGAGTCTCTTCCGAAGAGCTTCATTCCATTCCAAACGAATGCGTCTTTGAACAAGATAGAATTTAACCTGACAACCCTTCTGAATGAACTCCAGCGATTCCAAAACCTAACTATGGGTAAAGGAAAACAAGTGGAAGCAAATGTTGCTACCACAAAAAGAAAATTTATAAGAGGATCGTCCTCTAAAACCAAAGCTGGACCCTCAAAACCTAATGCTCAAATAAAAAAGAAGGGAAAGGGAAAGACTCCCAAACAGAACAAGGGTAAGAAAGCTGCAGAAAAAGGTAAGTGTTACCATTGTGGCCAAAACGGGCACTGGTTAAGAAACTGCCCAAAATACCTTGCAGAAAAAAAAGGCAGAGAAGGAAACACAAGGAAAATAGTTCTTGGAAAAAGCTTTCAGAAGGCGAGATCACTCTCAAGGTTGGAACAGGAGAGATGGTCTCAGCTTCAGCAAACAGCTGAAACTCAGAATAAAAGACAAAAAGTTTCTTCTAATGCCTATTTATGGCACTTAAGACTTGGTCACATAAATCTCAATAGGATTGGGAGATTGGTTAAAAGTGGGCTTCTAAGTCCGTTAGAAGATAACTCTTTACCTCCTTGTGAATCTTGTCTTGAAGGAAAAATGACCAAGAGATCTTTTACTGGAAAAGGTCTAAGAGCCAAAGGACCCTTAGAGCTCGTACATTCGGACCTTTGTGGACCAATGAATGTCAAAGCTCGAGGTGGATATGAATATTTCATTAGCTTCATTGATGATTATTCAAGGTATGGTCATATTTACCTAATACATCATAAGTCTAATAGTCTTGAAAAGTTCAAAGAATATAAGGCTGAAGTAGAAAACGAATTAGGTAAAACAATAAAAATACTTCGATCAGATCGAGGTGGAGAGTATATGGACTTACGATTCCGAGACTATTTAATAGAAAATGGAATCCAGTCACAACTCTCTGCACCTAGTACACCTCAACAGAACGGTGTATCAGAAAGAAGAAACCGGACCTTGTTAGACATGGTTCGCTCTATGATAAGTTTTTCTCAGATGTCAGATTCTTTTTGGGGATATGCTTTAGAAACAGCTGCTTATATTTTGAATAATGTTCCCTCTAAAAGTGTTTCAGAAACACCTTATGAGCTATGGAAAGGGCGTAAAGGAAGTTTACGTCATTTTAGAATTTGGGGTTGTCCAGCACACGTGTTGGTACAAAATCCAAAGAAATTGGAACATCGTTCAAAATTATGCTTTTTTATAGGTTATCCAAAAGAATCAAGAGGTGGTTTGTTTTATGATCCTCAAGAAAATAAAATATTTGTGTCAACAAATGCCACATTCTTAGAGGAAGACCACATCAGGGATCATCAACCTCGTAGTAAACTAGTATTAAAAGAAATTTCCAAAAGTGCTATAGATAAACCTAGTTCATCCACTAAGGTAGTTGATAAGACTAGGAAATCTGGTCAATCACATCCTTCTCAACAGTTGAGAGAGCCTCGACGTAGTGGGAGGGTTGTTCATCAGCCTGATCGCTATTTGGGTTTAATTGAAACTCAAGTCGTCATACCTGACGATGGCATAGAGGATCCATTAACCTATAAACAGGCAATGAAAGATGTAGATCGTGACCAATGGATCAAAGCCATGGACCTCGAAATGGAGTCTATGTACTTTAATTCTGTCTGGACTCTAGTAGATCAACCAAATGACGTAAAACCTATTGGTTGTAAATGGATCTACAAGAGAAAACGAGACCATGCCGGTAAAGTACAGACTTTCAAGGCTCGACTTGTGGCAAAGGGTTATACCCAGAGAGAGGGAGTAGACTATGAGGAAACTTTCTCTCCTGTTGCCATGTTAAAGTCAATTAGAATACTCTTATCCATCGCCACTTTTTATGATTATGAAATTTGGCAGATGGATGTCAAGACAGCTTTTTTGAATGGTAATCTTGAAGAGAGTATCTATATGTCTCAACCAGAGGGGTTTATAGAACAAGATCAAGAACAAAAGGTTTGTAAGCTTAAAAAATCCATTTATGGATTAAAACAAGCTTCTAGATCCTGGAATATAAGATTTGATACTGCGATCAAATCTTATGGCTTTGAACAAAATGTTGACGAGCCTTGTGTTTACAAAAAGGTCGTCAATTTCATTATAGCATTTTTAGTCTTATATGTAGATGATGTTCTACTTATTGGAAATGACGTAGGATATCTTACTGATATCAAGAAATGGCTAGCTATGCAATTTCAAAAAAGATCTGGGAGATGCACAATACGTTCTCGGAATCCAAATTGTTCGAAACCATATGGAATTCATTTGTCAAAGGAACAATGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGAAATATTCCCTATGCTTCCGCTGTTGGAAGTTTAATGTATGCAATGTTATGTACTAGACCTGACATTTGCTACTCAGTAGGGATGGTCAGTAGGTATCAATCCAATCCTGGACGTGATCACTGGACAGCCGTTAAAAACATTCTAAAATATCTTCGAAGAACAAAAGACTACATGCTCATGTATGGTACAAAGGATCTGATCCTTACTGGATACACTGATTCAGATTTCCAAACTGATAAAGATGCTAGAAAGTCTACATCAGGATCAGTATTTACTCTAAATGGAGGAGCAGTAGTTTGGAGAAGCATAAAGCAAACTTGTATAGCTGATTCCACAATGGAAGCTGAATACGTAGCGGCTTGTGAAGCAGCAAAAGAAGCATGGTGCAGTTGA50010001500200025003000Score = Expect = 1.4E-7 / Score = 33.7Expect = 6.8E-17 / Score = 61.5Score = Score = Score = Score = Expect = 2.42369E-27 / Score = 106.398Score = 10.542789Expect = 1.4E-12 / Score = 47.2Expect = 1.0E-10 / Score = 41.8Score = 23.861397Expect = 6.4E-41 / Score = 141.8Expect = 4.1E-63 / Score = 213.2Score = Score = Score = SequenceCoilG3DSA:4.10.60.10PF14223mobidb-litemobidb-litePTHR45895cd09272SM00343PF00098PS50158PF13976PF00665PS50994G3DSA:3.30.420.10PF07727SSF57756SSF53098SSF56672
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 175..195
NoneNo IPR availableGENE3D4.10.60.10coord: 247..312
e-value: 1.4E-7
score: 33.7
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 62..191
e-value: 6.8E-17
score: 61.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 632..664
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..253
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 687..1010
coord: 304..633
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 1019..1078
e-value: 2.42369E-27
score: 106.398
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 255..271
e-value: 4.8E-4
score: 29.5
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 254..271
e-value: 1.4E-5
score: 25.0
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 255..271
score: 10.542789
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 315..369
e-value: 1.4E-12
score: 47.2
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 383..483
e-value: 1.0E-10
score: 41.8
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 380..545
score: 23.861397
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 378..554
e-value: 6.4E-41
score: 141.8
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 718..911
e-value: 4.1E-63
score: 213.2
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 236..274
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 379..539
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 718..1075