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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGCAATCTGTAATTTTACCGCCAAACTCGACTTTACTGTCGACCAAACACCAAGAAACTGAGAGACCTGATACCGAGACCCAAAACACACCAGAAACCGCCTCCTCTAACCGAAGACCCATGTGTAGAACAAACACTGCACAATTGAATAAAAACCCACAGCTAAACCAACCTTTAACGGCTCAAAACTCACGGTTAAACCCACTGCTAAACCACGGTCAAGACTGCTGCCGAACATGCCACAAGGACGCCAGAAGAATGCCGCTGAAGTCGTCCTCTCCGCCAAACACTGGAACCCATCAACTGGATAACAGTTTGGAACTCACCGCCAACGCCGTCAATGGAGCGCCGCCTCTCTCTCTGTTTTGTGTGCTTTACGGTAGCCTCACCCTCTCTCTTAGTGTGCTTTTCGGCTGCCCCCTCACTTTCCTCTCTTTTCTTTTGTTTTAATTAAAAGACCTCAAGAGGAAGGTGAAGGATTTGCAAAAAAAAATGTCATTA mRNA sequence ATGCAATCTGTAATTTTACCGCCAAACTCGACTTTACTGTCGACCAAACACCAAGAAACTGAGAGACCTGATACCGAGACCCAAAACACACCAGAAACCGCCTCCTCTAACCGAAGACCCATGTGTAGAACAAACACTGCACAATTGAATAAAAACCCACAGCTAAACCAACCTTTAACGGCTCAAAACTCACGGTTAAACCCACTGCTAAACCACGGTCAAGACTGCTGCCGAACATGCCACAAGGACGCCAGAAGAATGCCGCTGAAGTCGTCCTCTCCGCCAAACACTGGAACCCATCAACTGGATAACAGTTTGGAACTCACCGCCAACGCCGTCAATGGAGCGCCGCCTCTCTCTCTGTTTTGTGTGCTTTACGACCTCAAGAGGAAGGTGAAGGATTTGCAAAAAAAAATGTCATTA Coding sequence (CDS) ATGCAATCTGTAATTTTACCGCCAAACTCGACTTTACTGTCGACCAAACACCAAGAAACTGAGAGACCTGATACCGAGACCCAAAACACACCAGAAACCGCCTCCTCTAACCGAAGACCCATGTGTAGAACAAACACTGCACAATTGAATAAAAACCCACAGCTAAACCAACCTTTAACGGCTCAAAACTCACGGTTAAACCCACTGCTAAACCACGGTCAAGACTGCTGCCGAACATGCCACAAGGACGCCAGAAGAATGCCGCTGAAGTCGTCCTCTCCGCCAAACACTGGAACCCATCAACTGGATAACAGTTTGGAACTCACCGCCAACGCCGTCAATGGAGCGCCGCCTCTCTCTCTGTTTTGTGTGCTTTACGACCTCAAGAGGAAGGTGAAGGATTTGCAAAAAAAAATGTCATTA Protein sequence MQSVILPPNSTLLSTKHQETERPDTETQNTPETASSNRRPMCRTNTAQLNKNPQLNQPLTAQNSRLNPLLNHGQDCCRTCHKDARRMPLKSSSPPNTGTHQLDNSLELTANAVNGAPPLSLFCVLYDLKRKVKDLQKKMSL
Homology
BLAST of CSPI02G15240 vs. ExPASy TrEMBL
Match: A0A0A0LJP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G297250 PE=4 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 1.2e-68 Identity = 135/141 (95.74%), Postives = 137/141 (97.16%), Query Frame = 0 Query: 1 MQSVILPPNSTLLSTKHQETERPDTETQNTPETASSNRRPMCRTNTAQLNKNPQLNQPLT 60 MQSVILPPNSTLLSTKHQETERPDTETQNTPETASSNRRPMCRTNTAQLNKNPQLNQPLT Sbjct: 1 MQSVILPPNSTLLSTKHQETERPDTETQNTPETASSNRRPMCRTNTAQLNKNPQLNQPLT 60
Query: 61 AQNSRLNPLLNHGQDCCRTCHKDARRMPLKSSSPPNTGTHQLDNSLELTANAVNGAPPLS 120 AQNSRLNPLLNHGQDCCRTCHKDA R PLKSSSPPN GTHQLDNSLELTANAVNGAPPLS Sbjct: 61 AQNSRLNPLLNHGQDCCRTCHKDAGRTPLKSSSPPNAGTHQLDNSLELTANAVNGAPPLS 120
Query: 121 LFCVLYDLKRKVKDLQKKMSL 142 LFCVLYDLKRKVKDLQKK ++ Sbjct: 121 LFCVLYDLKRKVKDLQKKNAI 141
BLAST of CSPI02G15240 vs. NCBI nr
Match: KGN62100.1 (hypothetical protein Csa_006137 [Cucumis sativus]) HSP 1 Score: 268.9 bits (686), Expect = 2.6e-68 Identity = 135/141 (95.74%), Postives = 137/141 (97.16%), Query Frame = 0 Query: 1 MQSVILPPNSTLLSTKHQETERPDTETQNTPETASSNRRPMCRTNTAQLNKNPQLNQPLT 60 MQSVILPPNSTLLSTKHQETERPDTETQNTPETASSNRRPMCRTNTAQLNKNPQLNQPLT Sbjct: 1 MQSVILPPNSTLLSTKHQETERPDTETQNTPETASSNRRPMCRTNTAQLNKNPQLNQPLT 60
Query: 61 AQNSRLNPLLNHGQDCCRTCHKDARRMPLKSSSPPNTGTHQLDNSLELTANAVNGAPPLS 120 AQNSRLNPLLNHGQDCCRTCHKDA R PLKSSSPPN GTHQLDNSLELTANAVNGAPPLS Sbjct: 61 AQNSRLNPLLNHGQDCCRTCHKDAGRTPLKSSSPPNAGTHQLDNSLELTANAVNGAPPLS 120
Query: 121 LFCVLYDLKRKVKDLQKKMSL 142 LFCVLYDLKRKVKDLQKK ++ Sbjct: 121 LFCVLYDLKRKVKDLQKKNAI 141
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LJP6 | 1.2e-68 | 95.74 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G297250 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KGN62100.1 | 2.6e-68 | 95.74 | hypothetical protein Csa_006137 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..16 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 27..66 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..66 |
Relationships
The following mRNA feature(s) are a part of this gene:
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