CSPI02G13410 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G13410
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Location	Chr2: 13437672 .. 13438413 (-)
RNA-Seq Expression	CSPI02G13410
Synteny	CSPI02G13410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACCAAGTTATTGTTTTCTTTTCTTTTTCATCTTTTCCTCATTTTTTTCATTGTTATCCTTTTTCCTTTTTTAGTATATATATGTTCACTTTTTTTGTTTTCTTTTGATGTTTGTGCATTGACACAAACCCTAACAAAAAAAAAAAAAAAAAAGGCTTTACTAATCCAATTAAGTTTCTTAGGACTTGAGTCAAGTAAGTTCAAATTGTTCGAATTATTGAACACCTTTAAAGCTTAATAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGAAGGAGAAGAAGAAGGAGCAGAAGAAGGAGGAGAAGCAGATGAAGAAGCAGATGAAGCAGAAGATGAAGCAGATGATGAAGATGAAGGAGGAGGAGAAGAAGGAGGAGAAGAAGAAGGAGAAGAAGAAGGAGAAGAAGAAGGAGAAGAAGGAGCAGATGAAGCAGAAGAAGAAGCAGATGAAGCAGATGATGAAGGAGCAGATGAAGACGCAGATGAAGGAGAAGATGAAGGAGAAGATGAAGGAGAAGATGAAGAGGAAGATGAAGGGGAAGATGAAGATGAAGGGGAAGATGAAGATGAAAGGGAAGATGAAAGGGAAGATGAAAGGGAAGATGAAGAGAAGCAGATGATGAAGATGAAAGAGAAGTTGAAGGGGAAGATGAAGATGAAGGGGAAGATGAAGATGAAAGGGAAGATGAAAGGGAAGAGGAAAGGGAAGAGGAAGAGAAGCAGATGA

mRNA sequence

ATGCAACCAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGAAGGAGAAGAAGAAGGAGCAGAAGAAGGAGGAGAAGCAGATGAAGAAGCAGATGAAGCAGAAGATGAAGCAGATGATGAAGATGAAGGAGGAGGAGAAGAAGGAGGAGAAGAAGAAGGAGAAGAAGAAGGAGAAGAAGAAGGAGAAGAAGGAGCAGATGAAGCAGAAGAAGAAGCAGATGAAGCAGATGATGAAGGAGCAGATGAAGACGCAGATGAAGGAGAAGATGAAGGAGAAGATGAAGGAGAAGATGAAGAGGAAGATGAAGGGGAAGATGAAGATGAAGGGGAAGATGAAGATGAAAGGGAAGATGAAAGGGAAGATGAAAGGGAAGATGAAGAGAAGCAGATGATGAAGATGAAAGAGAAGTTGAAGGGGAAGATGAAGATGAAGGGGAAGATGAAGATGAAAGGGAAGATGAAAGGGAAGAGGAAAGGGAAGAGGAAGAGAAGCAGATGA

Coding sequence (CDS)

ATGCAACCAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGAAGGAGAAGAAGAAGGAGCAGAAGAAGGAGGAGAAGCAGATGAAGAAGCAGATGAAGCAGAAGATGAAGCAGATGATGAAGATGAAGGAGGAGGAGAAGAAGGAGGAGAAGAAGAAGGAGAAGAAGAAGGAGAAGAAGAAGGAGAAGAAGGAGCAGATGAAGCAGAAGAAGAAGCAGATGAAGCAGATGATGAAGGAGCAGATGAAGACGCAGATGAAGGAGAAGATGAAGGAGAAGATGAAGGAGAAGATGAAGAGGAAGATGAAGGGGAAGATGAAGATGAAGGGGAAGATGAAGATGAAAGGGAAGATGAAAGGGAAGATGAAAGGGAAGATGAAGAGAAGCAGATGATGAAGATGAAAGAGAAGTTGAAGGGGAAGATGAAGATGAAGGGGAAGATGAAGATGAAAGGGAAGATGAAAGGGAAGAGGAAAGGGAAGAGGAAGAGAAGCAGATGA

Protein sequence

MQPRGGGGGGGGGGGEEGEEEGAEEGGEADEEADEAEDEADDEDEGGGEEGGEEEGEEEGEEEGEEGADEAEEEADEADDEGADEDADEGEDEGEDEGEDEEEDEGEDEDEGEDEDEREDEREDEREDEEKQMMKMKEKLKGKMKMKGKMKMKGKMKGKRKGKRKRSR*

Homology

The following BLAST results are available for this feature:

BLAST of CSPI02G13410 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI02G13410 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI02G13410 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI02G13410 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 119..146
None	No IPR available	COILS	Coil	Coil	coord: 61..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G13410.1	CSPI02G13410.1	mRNA