CSPI02G12860 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G12860
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr2: 13092090 .. 13093798 (-)
RNA-Seq Expression	CSPI02G12860
Synteny	CSPI02G12860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACCAAATGACGAAAGTACCCCTGAAATATGAAAGTAAAAAAGACTTCCAAATGCTCTTTCCTTCTGTTGCTTCATCCCATTCTTTTGTTTGATGTCTATACGAAGTCTTGATTCCTTCGCCAGTTTCTTCCACCATTCTTCTCAATTCAAAAATCTCAAAACCATTAAGAAGATTCACGCTCATTTGCTTAGAACCCACTTCCAATTTTTCTCCCCGAATCTTCACTCTAAGCTTATACTATCCTACTCCCAAATCATCCCCAATTTTGATGCGAAAAGCTTAAACGGCATCTTCAAATGCATCATCCCCAGAACTTCTTTAACCTTTAATGTAATGATTTCTGACTTTTCTCGACATGGGTTTCAAGATTTTGCGTTAATGGGGTTCTCTTTCATGCATTCTAATGGGGTTCCTATTGACACGTATGCCCTTTGCAGCTCTTTGAATGGTTGTTCTTTTGTTCAGAATGTGGTGTATGGAAAACAAATTCACGCATTCGTGGGGAAATCAGGTTGGTTGTGTAGTGTTTTTGTTGGGAGTGCGATTGTTGATATGTATGCAAAAAATTCTTTGATTTATGATGCCGTTGAAGTGTTTGATGAAATGCCCATGAAGAATACTGTGTGCGCAAATGCATTGCTGGCTGGGTATGGCGAGGCTAGGATGTGGGTTGAAGGACTTGAATTGCTACGGAAGATGCAGGGTCTGGATTTGAAGTATGACCAGTTCACTCTGTCTGCTTCTTTACGAGCATGCACTGGTTTATCTGCAATTGCACTAGGTAAGCAAGTGCATGCTTATATACTGCGAACGGTTTATGATATTACAAGTGATGTTCATTTGCAAAGCACATTAGTTGAAATGTATGGGAAGAATGGGATGGTGGAAAAAGCATGGAATGTATTCAAGTTTGCAGGACTTGGACGCCAAGAAGATGGGAAAAGGGATATTATAATGTGGACTTCTATGCTTAGTGTATATGGTAGAAATGGGTGTTACAAAAGAGTAATTGAACTGTACAACCAGATGTTGATGGAAGGGATCAAACCAGATAGGGTGGCTTTTGTGACAGTCATATCAGCTTGTGGTCATACTGGCGAGGTGAATCTTGGAGTCAAGTATTTTGACTCCATGCAGAGTGATTTTGGGTTGGAACCTGGTCAAGAGCACTACAGTTGTTTGGCTGACTTGCTCTGTAGAGCTGGGGAATTGGAAAAGGCATGGAAGCTCGTAAATGATATCAAAAGTCGGGATTACAATGTTTCCCTGTGGGGAGCTTTACTCCGTGCTTGCTTGGAACAGGGAAATATTAAGTTGGGCAATTTGGCAGCTCGTAGGGCACTTGAATTGGATCCTCAGAATACTGGGATATTAGTTATGCTATCGAATCTATATGCTGGTTTTGGCTTGTGGAACGAGATAGAGCATTTGAGGGAATCTGTGAGAAAGGAAGGGCTGTATAAAGATGTTGCATGTAGCTGGATAGAGATCACAAGTTGAGCACTACTCAAATAACCTTGTGTAAAAGTTAAACGGCTCAAGTTGACATTTACGAGGAAATTGTTTCTTTTGAGGTGCTATGATGAAATGGTTTCATTGATCATAAGAGCGTAGTTTGTATCATAGTTATATCCAGTATTACTACTCAGTTTTATGTAAATCACATAAAGGCAGTTCTAAACATCAATGAATAAAATAAGAAGGTGA

mRNA sequence

GACCAAATGACGAAAGTACCCCTGAAATATGAAAGTAAAAAAGACTTCCAAATGCTCTTTCCTTCTGTTGCTTCATCCCATTCTTTTGTTTGATGTCTATACGAAGTCTTGATTCCTTCGCCAGTTTCTTCCACCATTCTTCTCAATTCAAAAATCTCAAAACCATTAAGAAGATTCACGCTCATTTGCTTAGAACCCACTTCCAATTTTTCTCCCCGAATCTTCACTCTAAGCTTATACTATCCTACTCCCAAATCATCCCCAATTTTGATGCGAAAAGCTTAAACGGCATCTTCAAATGCATCATCCCCAGAACTTCTTTAACCTTTAATGTAATGATTTCTGACTTTTCTCGACATGGGTTTCAAGATTTTGCGTTAATGGGGTTCTCTTTCATGCATTCTAATGGGGTTCCTATTGACACGTATGCCCTTTGCAGCTCTTTGAATGGTTGTTCTTTTGTTCAGAATGTGGTGTATGGAAAACAAATTCACGCATTCGTGGGGAAATCAGGTTGGTTGTGTAGTGTTTTTGTTGGGAGTGCGATTGTTGATATGTATGCAAAAAATTCTTTGATTTATGATGCCGTTGAAGTGTTTGATGAAATGCCCATGAAGAATACTGTGTGCGCAAATGCATTGCTGGCTGGGTATGGCGAGGCTAGGATGTGGGTTGAAGGACTTGAATTGCTACGGAAGATGCAGGGTCTGGATTTGAAGTATGACCAGTTCACTCTGTCTGCTTCTTTACGAGCATGCACTGGTTTATCTGCAATTGCACTAGGTAAGCAAGTGCATGCTTATATACTGCGAACGGTTTATGATATTACAAGTGATGTTCATTTGCAAAGCACATTAGTTGAAATGTATGGGAAGAATGGGATGGTGGAAAAAGCATGGAATGTATTCAAGTTTGCAGGACTTGGACGCCAAGAAGATGGGAAAAGGGATATTATAATGTGGACTTCTATGCTTAGTGTATATGGTAGAAATGGGTGTTACAAAAGAGTAATTGAACTGTACAACCAGATGTTGATGGAAGGGATCAAACCAGATAGGGTGGCTTTTGTGACAGTCATATCAGCTTGTGGTCATACTGGCGAGGTGAATCTTGGAGTCAAGTATTTTGACTCCATGCAGAGTGATTTTGGGTTGGAACCTGGTCAAGAGCACTACAGTTGTTTGGCTGACTTGCTCTGTAGAGCTGGGGAATTGGAAAAGGCATGGAAGCTCGTAAATGATATCAAAAGTCGGGATTACAATGTTTCCCTGTGGGGAGCTTTACTCCGTGCTTGCTTGGAACAGGGAAATATTAAGTTGGGCAATTTGGCAGCTCGTAGGGCACTTGAATTGGATCCTCAGAATACTGGGATATTAGTTATGCTATCGAATCTATATGCTGGTTTTGGCTTGTGGAACGAGATAGAGCATTTGAGGGAATCTGTGAGAAAGGAAGGGCTGTATAAAGATGTTGCATGTAGCTGGATAGAGATCACAAGTTGAGCACTACTCAAATAACCTTGTGTAAAAGTTAAACGGCTCAAGTTGACATTTACGAGGAAATTGTTTCTTTTGAGGTGCTATGATGAAATGGTTTCATTGATCATAAGAGCGTAGTTTGTATCATAGTTATATCCAGTATTACTACTCAGTTTTATGTAAATCACATAAAGGCAGTTCTAAACATCAATGAATAAAATAAGAAGGTGA

Coding sequence (CDS)

ATGTCTATACGAAGTCTTGATTCCTTCGCCAGTTTCTTCCACCATTCTTCTCAATTCAAAAATCTCAAAACCATTAAGAAGATTCACGCTCATTTGCTTAGAACCCACTTCCAATTTTTCTCCCCGAATCTTCACTCTAAGCTTATACTATCCTACTCCCAAATCATCCCCAATTTTGATGCGAAAAGCTTAAACGGCATCTTCAAATGCATCATCCCCAGAACTTCTTTAACCTTTAATGTAATGATTTCTGACTTTTCTCGACATGGGTTTCAAGATTTTGCGTTAATGGGGTTCTCTTTCATGCATTCTAATGGGGTTCCTATTGACACGTATGCCCTTTGCAGCTCTTTGAATGGTTGTTCTTTTGTTCAGAATGTGGTGTATGGAAAACAAATTCACGCATTCGTGGGGAAATCAGGTTGGTTGTGTAGTGTTTTTGTTGGGAGTGCGATTGTTGATATGTATGCAAAAAATTCTTTGATTTATGATGCCGTTGAAGTGTTTGATGAAATGCCCATGAAGAATACTGTGTGCGCAAATGCATTGCTGGCTGGGTATGGCGAGGCTAGGATGTGGGTTGAAGGACTTGAATTGCTACGGAAGATGCAGGGTCTGGATTTGAAGTATGACCAGTTCACTCTGTCTGCTTCTTTACGAGCATGCACTGGTTTATCTGCAATTGCACTAGGTAAGCAAGTGCATGCTTATATACTGCGAACGGTTTATGATATTACAAGTGATGTTCATTTGCAAAGCACATTAGTTGAAATGTATGGGAAGAATGGGATGGTGGAAAAAGCATGGAATGTATTCAAGTTTGCAGGACTTGGACGCCAAGAAGATGGGAAAAGGGATATTATAATGTGGACTTCTATGCTTAGTGTATATGGTAGAAATGGGTGTTACAAAAGAGTAATTGAACTGTACAACCAGATGTTGATGGAAGGGATCAAACCAGATAGGGTGGCTTTTGTGACAGTCATATCAGCTTGTGGTCATACTGGCGAGGTGAATCTTGGAGTCAAGTATTTTGACTCCATGCAGAGTGATTTTGGGTTGGAACCTGGTCAAGAGCACTACAGTTGTTTGGCTGACTTGCTCTGTAGAGCTGGGGAATTGGAAAAGGCATGGAAGCTCGTAAATGATATCAAAAGTCGGGATTACAATGTTTCCCTGTGGGGAGCTTTACTCCGTGCTTGCTTGGAACAGGGAAATATTAAGTTGGGCAATTTGGCAGCTCGTAGGGCACTTGAATTGGATCCTCAGAATACTGGGATATTAGTTATGCTATCGAATCTATATGCTGGTTTTGGCTTGTGGAACGAGATAGAGCATTTGAGGGAATCTGTGAGAAAGGAAGGGCTGTATAAAGATGTTGCATGTAGCTGGATAGAGATCACAAGTTGA

Protein sequence

MSIRSLDSFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFDAKSLNGIFKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVYDITSDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRNGCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQNTGILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEITS*

Homology

[Close]

BLAST of CSPI02G12860 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 8.0e-69
Identity = 135/409 (33.01%), Postives = 235/409 (57.46%), Query Frame = 0


Query: 60  DAKSLNGIFKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLN 119
           D  S   +F+ +  R+ +++  MI+ ++R G    A+  F  M   G+  D Y + + LN
Sbjct: 346 DLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 405

Query: 120 GCSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVC 179
            C+  + +  GK++H ++ ++     +FV +A++DMYAK   + +A  VF EM +K+ + 
Sbjct: 406 CCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS 465

Query: 180 ANALLAGYGEARMWVEGLELLR-KMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYI 239
            N ++ GY +     E L L    ++      D+ T++  L AC  LSA   G+++H YI
Sbjct: 466 WNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 525

Query: 240 LRTVYDITSDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYG 299
           +R  Y   SD H+ ++LV+MY K G +  A  +F        +   +D++ WT M++ YG
Sbjct: 526 MRNGY--FSDRHVANSLVDMYAKCGALLLAHMLF-------DDIASKDLVSWTVMIAGYG 585

Query: 300 RNGCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQ 359
            +G  K  I L+NQM   GI+ D ++FV+++ AC H+G V+ G ++F+ M+ +  +EP  
Sbjct: 586 MHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 645

Query: 360 EHYSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRAL 419
           EHY+C+ D+L R G+L KA++ + ++     + ++WGALL  C    ++KL    A +  
Sbjct: 646 EHYACIVDMLARTGDLIKAYRFIENMPIPP-DATIWGALLCGCRIHHDVKLAEKVAEKVF 705

Query: 420 ELDPQNTGILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEI 468
           EL+P+NTG  V+++N+YA    W +++ LR+ + + GL K+  CSWIEI
Sbjct: 706 ELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 744

[Close]

BLAST of CSPI02G12860 vs. ExPASy Swiss-Prot
Match: Q9LZ19 (Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H16 PE=2 SV=2)

HSP 1 Score: 254.6 bits (649), Expect = 2.2e-66
Identity = 135/401 (33.67%), Postives = 242/401 (60.35%), Query Frame = 0


Query: 67  IFKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCSFVQN 126
           +F  ++ R+ +++N MI  ++R+  +  AL  F  M + G     + + S L+ C    +
Sbjct: 118 VFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCD 177

Query: 127 VVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANALLAG 186
            +  K++H    K+    +++VG+A++D+YAK  +I DAV+VF+ M  K++V  ++++AG
Sbjct: 178 ALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAG 237

Query: 187 YGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVYDIT 246
           Y + + + E L L R+ Q + L+ +QFTLS+ + AC+ L+A+  GKQ+HA I ++ +   
Sbjct: 238 YVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFG-- 297

Query: 247 SDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRNGCYKRV 306
           S+V + S+ V+MY K G + +++ +F        E  ++++ +W +++S + ++   K V
Sbjct: 298 SNVFVASSAVDMYAKCGSLRESYIIF-------SEVQEKNLELWNTIISGFAKHARPKEV 357

Query: 307 IELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSCLAD 366
           + L+ +M  +G+ P+ V F +++S CGHTG V  G ++F  M++ +GL P   HYSC+ D
Sbjct: 358 MILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVD 417

Query: 367 LLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQNTG 426
           +L RAG L +A++L+  I   D   S+WG+LL +C    N++L  +AA +  EL+P+N G
Sbjct: 418 ILGRAGLLSEAYELIKSIPF-DPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAG 477

Query: 427 ILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEI 468
             V+LSN+YA    W EI   R+ +R   + K    SWI+I
Sbjct: 478 NHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDI 508

[Close]

BLAST of CSPI02G12860 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 8.3e-66
Identity = 157/496 (31.65%), Postives = 262/496 (52.82%), Query Frame = 0


Query: 8   SFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFDAKSLNGI 67
           SFAS     S   ++    ++H+ + ++ F      + S L+  YS+     DA+    +
Sbjct: 154 SFASVLSACSGLNDMNKGVQVHSLIAKSPF-LSDVYIGSALVDMYSKCGNVNDAQR---V 213

Query: 68  FKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCSFVQNV 127
           F  +  R  +++N +I+ F ++G    AL  F  M  + V  D   L S ++ C+ +  +
Sbjct: 214 FDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAI 273

Query: 128 VYGKQIHAFVGKSGWLCS-VFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCA------ 187
             G+++H  V K+  L + + + +A VDMYAK S I +A  +FD MP++N +        
Sbjct: 274 KVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG 333

Query: 188 -------------------------NALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTL 247
                                    NAL+AGY +     E L L   ++   +    ++ 
Sbjct: 334 YAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSF 393

Query: 248 SASLRACTGLSAIALGKQVHAYILRTVYDITS----DVHLQSTLVEMYGKNGMVEKAWNV 307
           +  L+AC  L+ + LG Q H ++L+  +   S    D+ + ++L++MY K G VE+ + V
Sbjct: 394 ANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLV 453

Query: 308 FKFAGLGRQEDGKRDIIMWTSMLSVYGRNGCYKRVIELYNQMLMEGIKPDRVAFVTVISA 367
           F+       +  +RD + W +M+  + +NG     +EL+ +ML  G KPD +  + V+SA
Sbjct: 454 FR-------KMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSA 513

Query: 368 CGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSCLADLLCRAGELEKAWKLVNDIKSRDYNV 427
           CGH G V  G  YF SM  DFG+ P ++HY+C+ DLL RAG LE+A  ++ ++  +  +V
Sbjct: 514 CGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSV 573

Query: 428 SLWGALLRACLEQGNIKLGNLAARRALELDPQNTGILVMLSNLYAGFGLWNEIEHLRESV 468
            +WG+LL AC    NI LG   A + LE++P N+G  V+LSN+YA  G W ++ ++R+S+
Sbjct: 574 -IWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSM 633

[Close]

BLAST of CSPI02G12860 vs. ExPASy Swiss-Prot
Match: Q9SI53 (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.1e-65
Identity = 139/401 (34.66%), Postives = 226/401 (56.36%), Query Frame = 0


Query: 67  IFKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCSFVQN 126
           +F  +  R  +++  MIS +S+      AL     M  + V  + Y   S L  C+ + +
Sbjct: 118 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSD 177

Query: 127 VVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANALLAG 186
           V   + +H  + K G    VFV SA++D++AK     DA+ VFDEM   + +  N+++ G
Sbjct: 178 V---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGG 237

Query: 187 YGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVYDIT 246
           + +       LEL ++M+      +Q TL++ LRACTGL+ + LG Q H +I++  YD  
Sbjct: 238 FAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YD-- 297

Query: 247 SDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRNGCYKRV 306
            D+ L + LV+MY K G +E A  VF        +  +RD+I W++M+S   +NG  +  
Sbjct: 298 QDLILNNALVDMYCKCGSLEDALRVF-------NQMKERDVITWSTMISGLAQNGYSQEA 357

Query: 307 IELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSCLAD 366
           ++L+ +M   G KP+ +  V V+ AC H G +  G  YF SM+  +G++P +EHY C+ D
Sbjct: 358 LKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMID 417

Query: 367 LLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQNTG 426
           LL +AG+L+ A KL+N+++     V+ W  LL AC  Q N+ L   AA++ + LDP++ G
Sbjct: 418 LLGKAGKLDDAVKLLNEMECEPDAVT-WRTLLGACRVQRNMVLAEYAAKKVIALDPEDAG 477

Query: 427 ILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEI 468
              +LSN+YA    W+ +E +R  +R  G+ K+  CSWIE+
Sbjct: 478 TYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEV 503

[Close]

BLAST of CSPI02G12860 vs. ExPASy Swiss-Prot
Match: Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.1e-65
Identity = 136/409 (33.25%), Postives = 232/409 (56.72%), Query Frame = 0


Query: 59  FDAKSLNGIFKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSL 118
           F   S+  +F+ +  +  +++N +I+ +++ G  + AL     M +  +  D++ L S L
Sbjct: 190 FGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249

Query: 119 NGCSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTV 178
              S   +V+ GK+IH +V + G    V++GS++VDMYAK++ I D+  VF  +  ++ +
Sbjct: 250 PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309

Query: 179 CANALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYI 238
             N+L+AGY +   + E L L R+M    +K      S+ + AC  L+ + LGKQ+H Y+
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369

Query: 239 LRTVYDITSDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYG 298
           LR  +   S++ + S LV+MY K G ++ A  +F    +        D + WT+++  + 
Sbjct: 370 LRGGFG--SNIFIASALVDMYSKCGNIKAARKIFDRMNV-------LDEVSWTAIIMGHA 429

Query: 299 RNGCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQ 358
            +G     + L+ +M  +G+KP++VAFV V++AC H G V+    YF+SM   +GL    
Sbjct: 430 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQEL 489

Query: 359 EHYSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRAL 418
           EHY+ +ADLL RAG+LE+A+  ++ +   +   S+W  LL +C    N++L    A +  
Sbjct: 490 EHYAAVADLLGRAGKLEEAYNFISKM-CVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF 549

Query: 419 ELDPQNTGILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEI 468
            +D +N G  V++ N+YA  G W E+  LR  +RK+GL K  ACSWIE+
Sbjct: 550 TVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEM 588

[Close]

BLAST of CSPI02G12860 vs. ExPASy TrEMBL
Match: A0A0A0LLD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258600 PE=4 SV=1)

HSP 1 Score: 953.7 bits (2464), Expect = 2.8e-274
Identity = 467/469 (99.57%), Postives = 469/469 (100.00%), Query Frame = 0


Query: 1   MSIRSLDSFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFD 60
           MSIRSLDSFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFD
Sbjct: 1   MSIRSLDSFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFD 60

Query: 61  AKSLNGIFKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNG 120
           AKSLNGIF+CIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNG
Sbjct: 61  AKSLNGIFQCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNG 120

Query: 121 CSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCA 180
           CSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCA
Sbjct: 121 CSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCA 180

Query: 181 NALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILR 240
           NALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILR
Sbjct: 181 NALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILR 240

Query: 241 TVYDITSDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRN 300
           TVYDITSDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRN
Sbjct: 241 TVYDITSDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRN 300

Query: 301 GCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEH 360
           GCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGV+YFDSMQSDFGLEPGQEH
Sbjct: 301 GCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVQYFDSMQSDFGLEPGQEH 360

Query: 361 YSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALEL 420
           YSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALEL
Sbjct: 361 YSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALEL 420

Query: 421 DPQNTGILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEITS 470
           DPQNTGILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEITS
Sbjct: 421 DPQNTGILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEITS 469

[Close]

BLAST of CSPI02G12860 vs. ExPASy TrEMBL
Match: A0A1S3C6K8 (pentatricopeptide repeat-containing protein At2g13600-like OS=Cucumis melo OX=3656 GN=LOC103497272 PE=4 SV=1)

HSP 1 Score: 927.2 bits (2395), Expect = 2.8e-266
Identity = 453/469 (96.59%), Postives = 458/469 (97.65%), Query Frame = 0


Query: 1   MSIRSLDSFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFD 60
           MS+RSLDSFASFF HSSQ KNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFD
Sbjct: 1   MSMRSLDSFASFFGHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFD 60

Query: 61  AKSLNGIFKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNG 120
           A+SLN IFKCIIPRTSLTFNVMISDFSRHGF DFALMGFSFMHSNGVPIDTYALCSSLNG
Sbjct: 61  AQSLNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNG 120

Query: 121 CSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCA 180
           CSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCA
Sbjct: 121 CSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCA 180

Query: 181 NALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILR 240
           NALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRAC GLSAIALGKQ+HAYILR
Sbjct: 181 NALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACAGLSAIALGKQLHAYILR 240

Query: 241 TVYDITSDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRN 300
           TVYDITSDVHLQSTLVEMYGKNGMVEKAWNVF FAGLG +EDGKRDIIMWTSMLSVYGRN
Sbjct: 241 TVYDITSDVHLQSTLVEMYGKNGMVEKAWNVFNFAGLGHREDGKRDIIMWTSMLSVYGRN 300

Query: 301 GCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEH 360
           GCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEH
Sbjct: 301 GCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEH 360

Query: 361 YSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALEL 420
           YSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALEL
Sbjct: 361 YSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALEL 420

Query: 421 DPQNTGILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEITS 470
           DPQN GI +MLSNLYAGFGLWNEIEHLRE VRKEGLYKDV CSWIEITS
Sbjct: 421 DPQNAGIFIMLSNLYAGFGLWNEIEHLREFVRKEGLYKDVGCSWIEITS 469

[Close]

BLAST of CSPI02G12860 vs. ExPASy TrEMBL
Match: A0A5D3BKX2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001930 PE=4 SV=1)

HSP 1 Score: 927.2 bits (2395), Expect = 2.8e-266
Identity = 453/469 (96.59%), Postives = 458/469 (97.65%), Query Frame = 0


Query: 1   MSIRSLDSFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFD 60
           MS+RSLDSFASFF HSSQ KNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFD
Sbjct: 1   MSMRSLDSFASFFGHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFD 60

Query: 61  AKSLNGIFKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNG 120
           A+SLN IFKCIIPRTSLTFNVMISDFSRHGF DFALMGFSFMHSNGVPIDTYALCSSLNG
Sbjct: 61  AQSLNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNG 120

Query: 121 CSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCA 180
           CSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCA
Sbjct: 121 CSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCA 180

Query: 181 NALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILR 240
           NALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRAC GLSAIALGKQ+HAYILR
Sbjct: 181 NALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACAGLSAIALGKQLHAYILR 240

Query: 241 TVYDITSDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRN 300
           TVYDITSDVHLQSTLVEMYGKNGMVEKAWNVF FAGLG +EDGKRDIIMWTSMLSVYGRN
Sbjct: 241 TVYDITSDVHLQSTLVEMYGKNGMVEKAWNVFNFAGLGHREDGKRDIIMWTSMLSVYGRN 300

Query: 301 GCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEH 360
           GCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEH
Sbjct: 301 GCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEH 360

Query: 361 YSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALEL 420
           YSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALEL
Sbjct: 361 YSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALEL 420

Query: 421 DPQNTGILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEITS 470
           DPQN GI +MLSNLYAGFGLWNEIEHLRE VRKEGLYKDV CSWIEITS
Sbjct: 421 DPQNAGIFIMLSNLYAGFGLWNEIEHLREFVRKEGLYKDVGCSWIEITS 469

[Close]

BLAST of CSPI02G12860 vs. ExPASy TrEMBL
Match: A0A6J1FYF9 (pentatricopeptide repeat-containing protein At1g50270-like OS=Cucurbita moschata OX=3662 GN=LOC111448605 PE=4 SV=1)

HSP 1 Score: 827.4 bits (2136), Expect = 3.0e-236
Identity = 402/466 (86.27%), Postives = 429/466 (92.06%), Query Frame = 0


Query: 4   RSLDSFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFDAKS 63
           RSLDSFASF  H+SQ +NLK IKK+HA LLRTHFQF SP+LHSKLILSYSQIIPNFDA S
Sbjct: 11  RSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYSQIIPNFDALS 70

Query: 64  LNGIFKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCSF 123
           L+  FKCIIPR+SLTFNVMISDF RHGF DF+LM  SFMHSNGVPIDTYALCSSL+ CS 
Sbjct: 71  LSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLSACSL 130

Query: 124 VQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANAL 183
           VQN VYGKQ+HAFVGKSGWLCSVFVGSAIVDMYAKNSLI DAV+VFDE+P+KNTVCANAL
Sbjct: 131 VQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANAL 190

Query: 184 LAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVY 243
           LAGYG+A MW++GLELLRKM  LDLKYDQFTLSASLRACTGLSAIALGKQVHAY+LRTVY
Sbjct: 191 LAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTVY 250

Query: 244 DITSDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRNGCY 303
           DI+SDVHLQSTL+EMYGK+GMVEKAWNVF FAGLG++EDGKRDIIMWTSMLS YGRNGCY
Sbjct: 251 DISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCY 310

Query: 304 KRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSC 363
            RVIELYNQMLMEGIKPDRVAFVTVISACGHTG+VNLGVKYFDSMQS FGLEPGQEHYSC
Sbjct: 311 IRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSC 370

Query: 364 LADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQ 423
           L DLLCRAGELEKAWKLV+ +KS DYNV LWGALLRACLE GNIKLGNLAARRALELDP 
Sbjct: 371 LVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLAARRALELDPT 430

Query: 424 NTGILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEITS 470
           N GI VMLSNLY+GFGLWNEIEHLR  VR+EGL+K V CSWIE TS
Sbjct: 431 NAGIFVMLSNLYSGFGLWNEIEHLRGFVRREGLHKGVGCSWIETTS 476

[Close]

BLAST of CSPI02G12860 vs. ExPASy TrEMBL
Match: A0A6J1CYG8 (pentatricopeptide repeat-containing protein At4g21300-like OS=Momordica charantia OX=3673 GN=LOC111015438 PE=4 SV=1)

HSP 1 Score: 789.3 bits (2037), Expect = 9.1e-225
Identity = 380/466 (81.55%), Postives = 425/466 (91.20%), Query Frame = 0


Query: 4   RSLDSFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFDAKS 63
           +SLD F+SF  HS++ KNL  IKK+HAHL+RTHFQFFSP+LH+KLILSYS+  PNF A+S
Sbjct: 11  QSLDFFSSFLRHSTETKNLTPIKKLHAHLIRTHFQFFSPSLHTKLILSYSRANPNFGAQS 70

Query: 64  LNGIFKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCSF 123
           L+ +FK IIPR+SLTFN++I+DF R+G  DFALM FSFMHSNGVPID+YALCS+L+ CS 
Sbjct: 71  LSSLFKFIIPRSSLTFNIIIADFCRNGSADFALMAFSFMHSNGVPIDSYALCSTLSACSL 130

Query: 124 VQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANAL 183
           VQNV++GKQ+HAFVGKSGWL SVFVGSAIVD+YAKN LI DAVEVFDE+PMKNTVCANAL
Sbjct: 131 VQNVMFGKQMHAFVGKSGWLSSVFVGSAIVDLYAKNGLIGDAVEVFDEIPMKNTVCANAL 190

Query: 184 LAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVY 243
           LAGYGEA+MWVEGLELLRKM  LDLKYD FTLSASLR C  LSAIALGKQVHAY+LR +Y
Sbjct: 191 LAGYGEAKMWVEGLELLRKMYVLDLKYDHFTLSASLRTCACLSAIALGKQVHAYLLRMIY 250

Query: 244 DITSDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRNGCY 303
           DI SDVHLQSTL+EMYGK+GMVEKAWNVF FAGL ++EDGKRDII+WTS+LSVYGRNGCY
Sbjct: 251 DIPSDVHLQSTLIEMYGKSGMVEKAWNVFNFAGLEQKEDGKRDIIVWTSILSVYGRNGCY 310

Query: 304 KRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSC 363
           KRVIELY+QMLMEGIKPDRVAFVTVISACGHTGEV+LG+KYFDSMQSDFGL+PGQEHYSC
Sbjct: 311 KRVIELYSQMLMEGIKPDRVAFVTVISACGHTGEVDLGIKYFDSMQSDFGLQPGQEHYSC 370

Query: 364 LADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQ 423
           L DLLCRAGEL+KAWKLVND+KS+  NVSLWGALLRACLE G I+LGNLAA++ALELDPQ
Sbjct: 371 LVDLLCRAGELDKAWKLVNDMKSQHCNVSLWGALLRACLEHGKIELGNLAAQKALELDPQ 430

Query: 424 NTGILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEITS 470
           NTGI VMLSNLYA FGLWNEIEHLRE V KEG+ KDV CSWIEITS
Sbjct: 431 NTGIFVMLSNLYAIFGLWNEIEHLREFVSKEGMCKDVGCSWIEITS 476

[Close]

BLAST of CSPI02G12860 vs. NCBI nr
Match: XP_008457622.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis melo] >XP_008457623.1 PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis melo] >XP_016902170.1 PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis melo] >KAA0045664.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ99619.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 927.2 bits (2395), Expect = 5.8e-266
Identity = 453/469 (96.59%), Postives = 458/469 (97.65%), Query Frame = 0


Query: 1   MSIRSLDSFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFD 60
           MS+RSLDSFASFF HSSQ KNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFD
Sbjct: 1   MSMRSLDSFASFFGHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFD 60

Query: 61  AKSLNGIFKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNG 120
           A+SLN IFKCIIPRTSLTFNVMISDFSRHGF DFALMGFSFMHSNGVPIDTYALCSSLNG
Sbjct: 61  AQSLNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNG 120

Query: 121 CSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCA 180
           CSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCA
Sbjct: 121 CSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCA 180

Query: 181 NALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILR 240
           NALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRAC GLSAIALGKQ+HAYILR
Sbjct: 181 NALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACAGLSAIALGKQLHAYILR 240

Query: 241 TVYDITSDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRN 300
           TVYDITSDVHLQSTLVEMYGKNGMVEKAWNVF FAGLG +EDGKRDIIMWTSMLSVYGRN
Sbjct: 241 TVYDITSDVHLQSTLVEMYGKNGMVEKAWNVFNFAGLGHREDGKRDIIMWTSMLSVYGRN 300

Query: 301 GCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEH 360
           GCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEH
Sbjct: 301 GCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEH 360

Query: 361 YSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALEL 420
           YSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALEL
Sbjct: 361 YSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALEL 420

Query: 421 DPQNTGILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEITS 470
           DPQN GI +MLSNLYAGFGLWNEIEHLRE VRKEGLYKDV CSWIEITS
Sbjct: 421 DPQNAGIFIMLSNLYAGFGLWNEIEHLREFVRKEGLYKDVGCSWIEITS 469

[Close]

BLAST of CSPI02G12860 vs. NCBI nr
Match: XP_038901137.1 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida] >XP_038901138.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida] >XP_038901139.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida] >XP_038901140.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida] >XP_038901141.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida] >XP_038901143.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 867.8 bits (2241), Expect = 4.1e-248
Identity = 426/466 (91.42%), Postives = 436/466 (93.56%), Query Frame = 0


Query: 4   RSLDSFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFDAKS 63
           RSLDSFASFF HS Q KNLK IK+IHAHLLRT FQFFSPNLHSKLILSYSQI PNFDA+S
Sbjct: 11  RSLDSFASFFRHSCQSKNLKAIKRIHAHLLRTRFQFFSPNLHSKLILSYSQINPNFDAQS 70

Query: 64  LNGIFKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCSF 123
           LN IFKCIIPR SL FNV+ISDFSRHGF DFALM FSFMHSNGVPIDTYALCSSL  CS 
Sbjct: 71  LNSIFKCIIPRRSLNFNVIISDFSRHGFPDFALMAFSFMHSNGVPIDTYALCSSLTSCSL 130

Query: 124 VQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANAL 183
           VQN VYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLI DAVEVFDE+PMKNTVCANAL
Sbjct: 131 VQNGVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVEVFDEIPMKNTVCANAL 190

Query: 184 LAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVY 243
           LAGYGEARMWVEGLELLR+MQ LDLKYDQFTLSASLRAC GLSAIALGKQVHAY+LRTVY
Sbjct: 191 LAGYGEARMWVEGLELLREMQALDLKYDQFTLSASLRACAGLSAIALGKQVHAYLLRTVY 250

Query: 244 DITSDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRNGCY 303
           DIT DVHLQSTL+EMYGK+GMVEKAWNVF FAGL ++EDGKRDIIMWTSMLSVYGRNGCY
Sbjct: 251 DITCDVHLQSTLIEMYGKSGMVEKAWNVFNFAGLRQKEDGKRDIIMWTSMLSVYGRNGCY 310

Query: 304 KRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSC 363
           KRVIELYNQMLMEG KPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSC
Sbjct: 311 KRVIELYNQMLMEGNKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSC 370

Query: 364 LADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQ 423
           L DLLCRAGELEKAWKLVNDIKS DYNVSLWGALLRACLEQGNIKLGNLAA RALELDPQ
Sbjct: 371 LVDLLCRAGELEKAWKLVNDIKSWDYNVSLWGALLRACLEQGNIKLGNLAAHRALELDPQ 430

Query: 424 NTGILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEITS 470
           N GI VMLSNLYAGFGLWNEIE LRE VRKEGLYKDV CSWIEITS
Sbjct: 431 NAGIFVMLSNLYAGFGLWNEIERLREFVRKEGLYKDVGCSWIEITS 476

[Close]

BLAST of CSPI02G12860 vs. NCBI nr
Match: KAG6571067.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 830.1 bits (2143), Expect = 9.6e-237
Identity = 403/466 (86.48%), Postives = 430/466 (92.27%), Query Frame = 0


Query: 4   RSLDSFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFDAKS 63
           RSLDSFASF  H+SQ +NLK IKK+HA LLRTHFQF SP+LHSKLILSYSQIIPNFDA S
Sbjct: 11  RSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYSQIIPNFDALS 70

Query: 64  LNGIFKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCSF 123
           L+  FKCIIPR+SLTFNVMISDF RHGF DF+LM  SFMHSNGVPIDTYALCSSL+ CS 
Sbjct: 71  LSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLSACSL 130

Query: 124 VQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANAL 183
           VQN VYGKQ+HAFVGKSGWLCSVFVGSAIVDMYAKNSLI DAV+VFDE+P+KNTVCANAL
Sbjct: 131 VQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANAL 190

Query: 184 LAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVY 243
           LAGYG+A MW++GLELLRKM  LDLKYDQFTLSASLRACTGLSAIALGKQVHAY+LRTVY
Sbjct: 191 LAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTVY 250

Query: 244 DITSDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRNGCY 303
           DI+SDVHLQSTL+EMYGK+GMVEKAWNVF FAGLG++EDGKRDIIMWTSMLS YGRNGCY
Sbjct: 251 DISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCY 310

Query: 304 KRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSC 363
            RVIELYNQMLMEGIKPDRVAFVTVISACGHTG+VNLGVKYFDSMQS FGLEPGQEHYSC
Sbjct: 311 IRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSC 370

Query: 364 LADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQ 423
           L DLLCRAGELEKAWKLV+ +KS DYNV LWGALLRACLE GNIKLGNLAARRALELDP 
Sbjct: 371 LVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLAARRALELDPT 430

Query: 424 NTGILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEITS 470
           N GI VMLSNLY+GFGLWNEIEHLRE VR+EGL+K V CSWIE TS
Sbjct: 431 NAGIFVMLSNLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIETTS 476

[Close]

BLAST of CSPI02G12860 vs. NCBI nr
Match: XP_023512242.1 (pentatricopeptide repeat-containing protein At2g13600-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 828.9 bits (2140), Expect = 2.1e-236
Identity = 401/466 (86.05%), Postives = 430/466 (92.27%), Query Frame = 0


Query: 4   RSLDSFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFDAKS 63
           RSLDSFASF  HSSQ +NLK IKK+HA LLRTHFQF SP+LHSKLILSYSQI+PNFDA+S
Sbjct: 24  RSLDSFASFLRHSSQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYSQIVPNFDAQS 83

Query: 64  LNGIFKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCSF 123
           L+  FKCIIPR+SLTFNVMISDF RHGF DF+L+  SFMHSNGVPIDTYALCSSL+ CS 
Sbjct: 84  LSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLIALSFMHSNGVPIDTYALCSSLSACSL 143

Query: 124 VQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANAL 183
           VQN VYG+Q+HAFVGKSGWLCSVFVGSAIVDMYAKNSLI DAV+VFDE+P+KNTVCANAL
Sbjct: 144 VQNAVYGQQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANAL 203

Query: 184 LAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVY 243
           LAGYG+A MW++GLELLRKM  L+LKYDQFTLSASLRACTGLSAIALGKQVHAY+LRTVY
Sbjct: 204 LAGYGDAGMWIDGLELLRKMHVLNLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTVY 263

Query: 244 DITSDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRNGCY 303
           DI+SDVHLQSTL+EMYGK+GMVEKAWNVF FAGLG +EDGKRDIIMWTSMLS YGRNGCY
Sbjct: 264 DISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGHKEDGKRDIIMWTSMLSAYGRNGCY 323

Query: 304 KRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSC 363
            RVIELYNQMLMEGIKPDRVAFVTVISACGHTG+VNLGVKYFDSMQS FGLEPGQEHYSC
Sbjct: 324 IRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSC 383

Query: 364 LADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQ 423
           L DLLCRAGEL+KAWKLV+DIKS D+NV LWGALLRACLE GNIKLGNLAAR ALELDP 
Sbjct: 384 LVDLLCRAGELDKAWKLVSDIKSSDHNVPLWGALLRACLEHGNIKLGNLAARMALELDPT 443

Query: 424 NTGILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEITS 470
           N GI VMLSNLYAGFGLWNEIEHLRE VR+EGLYK V CSWIE TS
Sbjct: 444 NAGIFVMLSNLYAGFGLWNEIEHLREFVRREGLYKGVGCSWIETTS 489

[Close]

BLAST of CSPI02G12860 vs. NCBI nr
Match: XP_022944055.1 (pentatricopeptide repeat-containing protein At1g50270-like [Cucurbita moschata] >KAG7010880.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 827.4 bits (2136), Expect = 6.2e-236
Identity = 402/466 (86.27%), Postives = 429/466 (92.06%), Query Frame = 0


Query: 4   RSLDSFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFDAKS 63
           RSLDSFASF  H+SQ +NLK IKK+HA LLRTHFQF SP+LHSKLILSYSQIIPNFDA S
Sbjct: 11  RSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYSQIIPNFDALS 70

Query: 64  LNGIFKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCSF 123
           L+  FKCIIPR+SLTFNVMISDF RHGF DF+LM  SFMHSNGVPIDTYALCSSL+ CS 
Sbjct: 71  LSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLSACSL 130

Query: 124 VQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANAL 183
           VQN VYGKQ+HAFVGKSGWLCSVFVGSAIVDMYAKNSLI DAV+VFDE+P+KNTVCANAL
Sbjct: 131 VQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANAL 190

Query: 184 LAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVY 243
           LAGYG+A MW++GLELLRKM  LDLKYDQFTLSASLRACTGLSAIALGKQVHAY+LRTVY
Sbjct: 191 LAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTVY 250

Query: 244 DITSDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRNGCY 303
           DI+SDVHLQSTL+EMYGK+GMVEKAWNVF FAGLG++EDGKRDIIMWTSMLS YGRNGCY
Sbjct: 251 DISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCY 310

Query: 304 KRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSC 363
            RVIELYNQMLMEGIKPDRVAFVTVISACGHTG+VNLGVKYFDSMQS FGLEPGQEHYSC
Sbjct: 311 IRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSC 370

Query: 364 LADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQ 423
           L DLLCRAGELEKAWKLV+ +KS DYNV LWGALLRACLE GNIKLGNLAARRALELDP 
Sbjct: 371 LVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLAARRALELDPT 430

Query: 424 NTGILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEITS 470
           N GI VMLSNLY+GFGLWNEIEHLR  VR+EGL+K V CSWIE TS
Sbjct: 431 NAGIFVMLSNLYSGFGLWNEIEHLRGFVRREGLHKGVGCSWIETTS 476

[Close]

BLAST of CSPI02G12860 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 262.7 bits (670), Expect = 5.7e-70
Identity = 135/409 (33.01%), Postives = 235/409 (57.46%), Query Frame = 0


Query: 60  DAKSLNGIFKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLN 119
           D  S   +F+ +  R+ +++  MI+ ++R G    A+  F  M   G+  D Y + + LN
Sbjct: 346 DLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 405

Query: 120 GCSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVC 179
            C+  + +  GK++H ++ ++     +FV +A++DMYAK   + +A  VF EM +K+ + 
Sbjct: 406 CCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS 465

Query: 180 ANALLAGYGEARMWVEGLELLR-KMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYI 239
            N ++ GY +     E L L    ++      D+ T++  L AC  LSA   G+++H YI
Sbjct: 466 WNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 525

Query: 240 LRTVYDITSDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYG 299
           +R  Y   SD H+ ++LV+MY K G +  A  +F        +   +D++ WT M++ YG
Sbjct: 526 MRNGY--FSDRHVANSLVDMYAKCGALLLAHMLF-------DDIASKDLVSWTVMIAGYG 585

Query: 300 RNGCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQ 359
            +G  K  I L+NQM   GI+ D ++FV+++ AC H+G V+ G ++F+ M+ +  +EP  
Sbjct: 586 MHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 645

Query: 360 EHYSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRAL 419
           EHY+C+ D+L R G+L KA++ + ++     + ++WGALL  C    ++KL    A +  
Sbjct: 646 EHYACIVDMLARTGDLIKAYRFIENMPIPP-DATIWGALLCGCRIHHDVKLAEKVAEKVF 705

Query: 420 ELDPQNTGILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEI 468
           EL+P+NTG  V+++N+YA    W +++ LR+ + + GL K+  CSWIEI
Sbjct: 706 ELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 744

[Close]

BLAST of CSPI02G12860 vs. TAIR 10
Match: AT5G04780.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 254.6 bits (649), Expect = 1.5e-67
Identity = 135/401 (33.67%), Postives = 242/401 (60.35%), Query Frame = 0


Query: 67  IFKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCSFVQN 126
           +F  ++ R+ +++N MI  ++R+  +  AL  F  M + G     + + S L+ C    +
Sbjct: 118 VFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCD 177

Query: 127 VVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANALLAG 186
            +  K++H    K+    +++VG+A++D+YAK  +I DAV+VF+ M  K++V  ++++AG
Sbjct: 178 ALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAG 237

Query: 187 YGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVYDIT 246
           Y + + + E L L R+ Q + L+ +QFTLS+ + AC+ L+A+  GKQ+HA I ++ +   
Sbjct: 238 YVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFG-- 297

Query: 247 SDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRNGCYKRV 306
           S+V + S+ V+MY K G + +++ +F        E  ++++ +W +++S + ++   K V
Sbjct: 298 SNVFVASSAVDMYAKCGSLRESYIIF-------SEVQEKNLELWNTIISGFAKHARPKEV 357

Query: 307 IELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSCLAD 366
           + L+ +M  +G+ P+ V F +++S CGHTG V  G ++F  M++ +GL P   HYSC+ D
Sbjct: 358 MILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVD 417

Query: 367 LLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQNTG 426
           +L RAG L +A++L+  I   D   S+WG+LL +C    N++L  +AA +  EL+P+N G
Sbjct: 418 ILGRAGLLSEAYELIKSIPF-DPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAG 477

Query: 427 ILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEI 468
             V+LSN+YA    W EI   R+ +R   + K    SWI+I
Sbjct: 478 NHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDI 508

[Close]

BLAST of CSPI02G12860 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 252.7 bits (644), Expect = 5.9e-67
Identity = 157/496 (31.65%), Postives = 262/496 (52.82%), Query Frame = 0


Query: 8   SFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFDAKSLNGI 67
           SFAS     S   ++    ++H+ + ++ F      + S L+  YS+     DA+    +
Sbjct: 154 SFASVLSACSGLNDMNKGVQVHSLIAKSPF-LSDVYIGSALVDMYSKCGNVNDAQR---V 213

Query: 68  FKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCSFVQNV 127
           F  +  R  +++N +I+ F ++G    AL  F  M  + V  D   L S ++ C+ +  +
Sbjct: 214 FDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAI 273

Query: 128 VYGKQIHAFVGKSGWLCS-VFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCA------ 187
             G+++H  V K+  L + + + +A VDMYAK S I +A  +FD MP++N +        
Sbjct: 274 KVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG 333

Query: 188 -------------------------NALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTL 247
                                    NAL+AGY +     E L L   ++   +    ++ 
Sbjct: 334 YAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSF 393

Query: 248 SASLRACTGLSAIALGKQVHAYILRTVYDITS----DVHLQSTLVEMYGKNGMVEKAWNV 307
           +  L+AC  L+ + LG Q H ++L+  +   S    D+ + ++L++MY K G VE+ + V
Sbjct: 394 ANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLV 453

Query: 308 FKFAGLGRQEDGKRDIIMWTSMLSVYGRNGCYKRVIELYNQMLMEGIKPDRVAFVTVISA 367
           F+       +  +RD + W +M+  + +NG     +EL+ +ML  G KPD +  + V+SA
Sbjct: 454 FR-------KMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSA 513

Query: 368 CGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSCLADLLCRAGELEKAWKLVNDIKSRDYNV 427
           CGH G V  G  YF SM  DFG+ P ++HY+C+ DLL RAG LE+A  ++ ++  +  +V
Sbjct: 514 CGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSV 573

Query: 428 SLWGALLRACLEQGNIKLGNLAARRALELDPQNTGILVMLSNLYAGFGLWNEIEHLRESV 468
            +WG+LL AC    NI LG   A + LE++P N+G  V+LSN+YA  G W ++ ++R+S+
Sbjct: 574 -IWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSM 633

[Close]

BLAST of CSPI02G12860 vs. TAIR 10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 250.8 bits (639), Expect = 2.2e-66
Identity = 139/401 (34.66%), Postives = 226/401 (56.36%), Query Frame = 0


Query: 67  IFKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCSFVQN 126
           +F  +  R  +++  MIS +S+      AL     M  + V  + Y   S L  C+ + +
Sbjct: 118 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSD 177

Query: 127 VVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANALLAG 186
           V   + +H  + K G    VFV SA++D++AK     DA+ VFDEM   + +  N+++ G
Sbjct: 178 V---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGG 237

Query: 187 YGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVYDIT 246
           + +       LEL ++M+      +Q TL++ LRACTGL+ + LG Q H +I++  YD  
Sbjct: 238 FAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YD-- 297

Query: 247 SDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRNGCYKRV 306
            D+ L + LV+MY K G +E A  VF        +  +RD+I W++M+S   +NG  +  
Sbjct: 298 QDLILNNALVDMYCKCGSLEDALRVF-------NQMKERDVITWSTMISGLAQNGYSQEA 357

Query: 307 IELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSCLAD 366
           ++L+ +M   G KP+ +  V V+ AC H G +  G  YF SM+  +G++P +EHY C+ D
Sbjct: 358 LKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMID 417

Query: 367 LLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQNTG 426
           LL +AG+L+ A KL+N+++     V+ W  LL AC  Q N+ L   AA++ + LDP++ G
Sbjct: 418 LLGKAGKLDDAVKLLNEMECEPDAVT-WRTLLGACRVQRNMVLAEYAAKKVIALDPEDAG 477

Query: 427 ILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEI 468
              +LSN+YA    W+ +E +R  +R  G+ K+  CSWIE+
Sbjct: 478 TYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEV 503

[Close]

BLAST of CSPI02G12860 vs. TAIR 10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 250.8 bits (639), Expect = 2.2e-66
Identity = 136/409 (33.25%), Postives = 232/409 (56.72%), Query Frame = 0


Query: 59  FDAKSLNGIFKCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSL 118
           F   S+  +F+ +  +  +++N +I+ +++ G  + AL     M +  +  D++ L S L
Sbjct: 190 FGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249

Query: 119 NGCSFVQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTV 178
              S   +V+ GK+IH +V + G    V++GS++VDMYAK++ I D+  VF  +  ++ +
Sbjct: 250 PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309

Query: 179 CANALLAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYI 238
             N+L+AGY +   + E L L R+M    +K      S+ + AC  L+ + LGKQ+H Y+
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369

Query: 239 LRTVYDITSDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYG 298
           LR  +   S++ + S LV+MY K G ++ A  +F    +        D + WT+++  + 
Sbjct: 370 LRGGFG--SNIFIASALVDMYSKCGNIKAARKIFDRMNV-------LDEVSWTAIIMGHA 429

Query: 299 RNGCYKRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQ 358
            +G     + L+ +M  +G+KP++VAFV V++AC H G V+    YF+SM   +GL    
Sbjct: 430 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQEL 489

Query: 359 EHYSCLADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRAL 418
           EHY+ +ADLL RAG+LE+A+  ++ +   +   S+W  LL +C    N++L    A +  
Sbjct: 490 EHYAAVADLLGRAGKLEEAYNFISKM-CVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF 549

Query: 419 ELDPQNTGILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEI 468
            +D +N G  V++ N+YA  G W E+  LR  +RK+GL K  ACSWIE+
Sbjct: 550 TVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEM 588

The following BLAST results are available for this feature:

BLAST of CSPI02G12860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN39	8.0e-69	33.01	Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t...	[more]
Q9LZ19	2.2e-66	33.67	Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidop...	[more]
Q9SIT7	8.3e-66	31.65	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]
Q9SI53	3.1e-65	34.66	Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop...	[more]
Q9LW63	3.1e-65	33.25	Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th...	[more]

BLAST of CSPI02G12860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLD6	2.8e-274	99.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258600 PE=4 SV=1	[more]
A0A1S3C6K8	2.8e-266	96.59	pentatricopeptide repeat-containing protein At2g13600-like OS=Cucumis melo OX=36...	[more]
A0A5D3BKX2	2.8e-266	96.59	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1FYF9	3.0e-236	86.27	pentatricopeptide repeat-containing protein At1g50270-like OS=Cucurbita moschata...	[more]
A0A6J1CYG8	9.1e-225	81.55	pentatricopeptide repeat-containing protein At4g21300-like OS=Momordica charanti...	[more]

BLAST of CSPI02G12860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457622.1	5.8e-266	96.59	PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis m...	[more]
XP_038901137.1	4.1e-248	91.42	pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benin...	[more]
KAG6571067.1	9.6e-237	86.48	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_023512242.1	2.1e-236	86.05	pentatricopeptide repeat-containing protein At2g13600-like [Cucurbita pepo subsp...	[more]
XP_022944055.1	6.2e-236	86.27	pentatricopeptide repeat-containing protein At1g50270-like [Cucurbita moschata] ...	[more]

BLAST of CSPI02G12860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18750.1	5.7e-70	33.01	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G04780.1	1.5e-67	33.67	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G13600.1	5.9e-67	31.65	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G03880.1	2.2e-66	34.66	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G23330.1	2.2e-66	33.25	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 324..356 e-value: 2.2E-4 score: 19.2 coord: 288..321 e-value: 2.9E-8 score: 31.4 coord: 361..389 e-value: 7.5E-5 score: 20.7 coord: 179..211 e-value: 4.1E-4 score: 18.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 179..205 e-value: 0.0056 score: 16.8 coord: 253..273 e-value: 0.041 score: 14.1 coord: 151..175 e-value: 0.016 score: 15.5 coord: 360..388 e-value: 0.0031 score: 17.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 286..332 e-value: 2.0E-8 score: 34.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 286..320 score: 11.651919
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 357..391 score: 8.648523
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 252..466 e-value: 1.0E-36 score: 128.9 coord: 75..251 e-value: 1.0E-22 score: 82.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 358..436
None	No IPR available	PANTHER	PTHR47928:SF115	OS02G0126500 PROTEIN	coord: 22..465
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 22..465

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G12860.1	CSPI02G12860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009451	RNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding