Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACTCTCTTCACCGTCTTCCTTACCCTCCGCCCTGCCGTGAACTTCTCACAAACTCCACTATCAGAGCTGCTGCTTCTTCTTCTTCCTCTTCACACAAAGGTACTCTCTTTCTCTCTCTTTCTCTATCTTTCTCTCTTCTTCTTCTTCTTCCTCTTCTATTTTCAATCTTATTTCTTCCCTTTATATAATGAATGGTTCAACCTAATTTGTAAGTACTAATTCGTTGATGTTTTCAGAAACGGACGTGTTTCAGCAATCAGAGCCTTGGAGAGGAAAATTTTGACACCAGGGGTTATTAATATCTGTAAGTTTAGTCTCCATTTTTTAAGGAGTTAATTTAATTTCTTCCAATTCCCAGTTTTAGGGTTGTTTTTGTATATGATTTTCTTGGAGTTACTTATTTGTATTCTTTATCATTAAATCCACGCGAGAGTTTCCTGTTTCATCAAGATTAATTGTTTACTTGCTGTGAAAATATGTGGGTACGCGGCCGATTTAGGATTTGGGATTAATTATAGTGAGAAGTATCTTACAGTCTTCTCACAGCTTAATTGTGGTGGTCATTTTCAAATTTCATACTCTTTTTGGGTTACGAATATTGAACATTTTGCAATGCTCACCAGCCGTTTGATGAAATTCTTCTATGGAGTGGTATGTTTGTATTTGTTCATCCTTCTTCATTCCTTCTTTGTGTGCCTGTCACTTTCTTAGTTTCTGCTCTTTTGGAATGACGGACATTGAACATTGCATAGTGCCCACCAAATGTTTGATTATATTCTAAAATAAAATGGTATATTTGTGCATGATCATGCTTCTCCATATCCCCTTAATGTGGCTGTCACTTCCTAGTTCCTAATTTCTACCCCTTTAGGGTGCTGAACATTGAACACTACGTAGAGGCTAGAGCCCACCAAATGTTTGACGAAATTCTTGTTGTAGGTAGTATAGTTGTGTTGTGCATATTCGTCATTCTTCGCTTTCCCATGTATAAACAGAAAAAGTTGTCCATTGAGAATTGGACTTTTGGTATTAGATTCAAATGTAGCTTAGCTTTACTATGATTGTTCCTTTTCTGTTTCTTTATCAATTTTGGTTAAATTTCTAAGTTGAGCCTTTGAACTTTCAATTTTATGTCTACTTAGTCCTGAATTTAAAAAGTTTTGAATAGGTCAAGGACCTATTAGATACGAAATCAAAACTTTAGTTACTTATTTGACACAATGGAAATTGGAAAGATTAAGGACGTACAAAACACTTTTTAAACTACAAGGACCTATTAGATACAAATGGGTAGTTCACGGGCCAAATAGATGCAAACTTAAAAGTTTAGGGACTAAATCTGAAGTTTAACCATCAATTTTTTTTGTAGAAGCTTTGATTGTAAGTACTAGTTATGATTACAGATCTATACAATGAAGAAAGGCTTGCACCCTCAATTGCAGTATGTATCATATGTCACTCCGAGTGGCAGATTGATGAGTGCTATGATGACCAAAGCACACAATGTCAGTAAAGTCTACCACCTCAGAGCAAAGCGCCAAATGATTGAAAGTATTGGGCAGCTTGCCAAGTTCAGACGTCGTTATGAGATGGGGAATGATGAAAATGCTGACAATGCTGAAAATGTTGAAAATGCTGAAAAGAAGTGACTTTCAGTGCAGCTAAAGGATCAGCTGTTTGCTTGGATGGTTCATTCTGAATTCGTTTTGAGGGCATGGCCTTGTGAGTGTTAAGCATTTAATGTTCGCTTCTTTCAATTAATCAACCCCTTTTCAGAGTCTAGTCTTTTACAGGACAGCGAGTTATTTCTTATTATGGTTTTGATGTGCTTTTACCATTAGAATGATCTAATCTGCATTCCTATTTTCTTTTGATCATTTTCCACCCTCTTCTCTTACTGGGAAGCCTAGATTTATGAAACATCGAGGTGTTTGGCACACCGATTTTCATAACTATAAGTTGTGTTAAATAACTCAACTTCGATAGCATTTATTATTGAAGTTCACACATTTATATATGAACACCATCTTCTCCTCTCTCTCTTTTGCAAATTTTTCGAAGAACACCAACTAACAACTATGTACTTCAAAACTTAACTCAGCA
mRNA sequence
CAACTCTCTTCACCGTCTTCCTTACCCTCCGCCCTGCCGTGAACTTCTCACAAACTCCACTATCAGAGCTGCTGCTTCTTCTTCTTCCTCTTCACACAAAGAAACGGACGTGTTTCAGCAATCAGAGCCTTGGAGAGGAAAATTTTGACACCAGGGGTTATTAATATCTATCTATACAATGAAGAAAGGCTTGCACCCTCAATTGCAGTATGTATCATATGTCACTCCGAGTGGCAGATTGATGAGTGCTATGATGACCAAAGCACACAATGTCAGTAAAGTCTACCACCTCAGAGCAAAGCGCCAAATGATTGAAAGTATTGGGCAGCTTGCCAAGTTCAGACGTCGTTATGAGATGGGGAATGATGAAAATGCTGACAATGCTGAAAATGTTGAAAATGCTGAAAAGAAGTGACTTTCAGTGCAGCTAAAGGATCAGCTGTTTGCTTGGATGGTTCATTCTGAATTCGTTTTGAGGGCATGGCCTTGTGAGTGTTAAGCATTTAATGTTCGCTTCTTTCAATTAATCAACCCCTTTTCAGAGTCTAGTCTTTTACAGGACAGCGAGTTATTTCTTATTATGGTTTTGATGTGCTTTTACCATTAGAATGATCTAATCTGCATTCCTATTTTCTTTTGATCATTTTCCACCCTCTTCTCTTACTGGGAAGCCTAGATTTATGAAACATCGAGGTGTTTGGCACACCGATTTTCATAACTATAAGTTGTGTTAAATAACTCAACTTCGATAGCATTTATTATTGAAGTTCACACATTTATATATGAACACCATCTTCTCCTCTCTCTCTTTTGCAAATTTTTCGAAGAACACCAACTAACAACTATGTACTTCAAAACTTAACTCAGCA
Coding sequence (CDS)
ATGAAGAAAGGCTTGCACCCTCAATTGCAGTATGTATCATATGTCACTCCGAGTGGCAGATTGATGAGTGCTATGATGACCAAAGCACACAATGTCAGTAAAGTCTACCACCTCAGAGCAAAGCGCCAAATGATTGAAAGTATTGGGCAGCTTGCCAAGTTCAGACGTCGTTATGAGATGGGGAATGATGAAAATGCTGACAATGCTGAAAATGTTGAAAATGCTGAAAAGAAGTGA
Protein sequence
MKKGLHPQLQYVSYVTPSGRLMSAMMTKAHNVSKVYHLRAKRQMIESIGQLAKFRRRYEMGNDENADNAENVENAEKK*
Homology
BLAST of CSPI02G01720 vs. ExPASy TrEMBL
Match:
A0A0A0LI20 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006250 PE=4 SV=1)
HSP 1 Score: 154.1 bits (388), Expect = 2.5e-34
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
Query: 1 MKKGLHPQLQYVSYVTPSGRLMSAMMTKAHNVSKVYHLRAKRQMIESIGQLAKFRRRYEM 60
MKKGLHPQLQYVSYVTPSGRLMSAMMTKAHNVSKVYHLRAKRQMIESIGQLAKFRRRYEM
Sbjct: 1 MKKGLHPQLQYVSYVTPSGRLMSAMMTKAHNVSKVYHLRAKRQMIESIGQLAKFRRRYEM 60
Query: 61 GNDENADNAENVENAEKK 79
GNDENADNAENVENAEKK
Sbjct: 61 GNDENADNAENVENAEKK 78
BLAST of CSPI02G01720 vs. ExPASy TrEMBL
Match:
A0A1S4E202 (uncharacterized protein LOC103497231 OS=Cucumis melo OX=3656 GN=LOC103497231 PE=4 SV=1)
HSP 1 Score: 142.5 bits (358), Expect = 7.5e-31
Identity = 71/78 (91.03%), Postives = 75/78 (96.15%), Query Frame = 0
Query: 1 MKKGLHPQLQYVSYVTPSGRLMSAMMTKAHNVSKVYHLRAKRQMIESIGQLAKFRRRYEM 60
MKKGLHPQLQYVSYVTPSGRLM AMMTK HNVSKVYHLRAKRQMIES+GQLAKF+RRYE+
Sbjct: 1 MKKGLHPQLQYVSYVTPSGRLMGAMMTKIHNVSKVYHLRAKRQMIESVGQLAKFKRRYEI 60
Query: 61 GNDENADNAENVENAEKK 79
GNDE+A NAENVENAEKK
Sbjct: 61 GNDEDAANAENVENAEKK 78
BLAST of CSPI02G01720 vs. ExPASy TrEMBL
Match:
A0A6J1CPB3 (uncharacterized protein LOC111013069 OS=Momordica charantia OX=3673 GN=LOC111013069 PE=4 SV=1)
HSP 1 Score: 107.5 bits (267), Expect = 2.7e-20
Identity = 55/77 (71.43%), Postives = 62/77 (80.52%), Query Frame = 0
Query: 1 MKKGLHPQLQYVSYVTPSGRLMSAMMTKAHNVSKVYHLRAKRQMIESIGQLAKFRRRYEM 60
MKKGLHPQ+Q++SYVT SGRLM MMTK H+V KVYH RAKRQM ES+GQ+AKF+RRYE
Sbjct: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHHVGKVYHFRAKRQMAESVGQIAKFKRRYEK 60
Query: 61 GNDENADNAENVENAEK 78
G AENVENAEK
Sbjct: 61 G------IAENVENAEK 71
BLAST of CSPI02G01720 vs. ExPASy TrEMBL
Match:
F6GUK5 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g00680 PE=4 SV=1)
HSP 1 Score: 101.7 bits (252), Expect = 1.5e-18
Identity = 46/67 (68.66%), Postives = 58/67 (86.57%), Query Frame = 0
Query: 1 MKKGLHPQLQYVSYVTPSGRLMSAMMTKAHNVSKVYHLRAKRQMIESIGQLAKFRRRYEM 60
MKKGLHPQ+Q++SYVT SGRLM MMT+ H+V KVYHLRA+RQM +S+GQ+AKF+RRYE
Sbjct: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTRIHSVGKVYHLRARRQMAQSVGQIAKFKRRYEQ 60
Query: 61 GNDENAD 68
N+EN +
Sbjct: 61 KNEENEE 67
BLAST of CSPI02G01720 vs. ExPASy TrEMBL
Match:
A0A438EM09 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_076149 PE=4 SV=1)
HSP 1 Score: 101.7 bits (252), Expect = 1.5e-18
Identity = 46/67 (68.66%), Postives = 58/67 (86.57%), Query Frame = 0
Query: 1 MKKGLHPQLQYVSYVTPSGRLMSAMMTKAHNVSKVYHLRAKRQMIESIGQLAKFRRRYEM 60
MKKGLHPQ+Q++SYVT SGRLM MMT+ H+V KVYHLRA+RQM +S+GQ+AKF+RRYE
Sbjct: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTRIHSVGKVYHLRARRQMAQSVGQIAKFKRRYEQ 60
Query: 61 GNDENAD 68
N+EN +
Sbjct: 61 KNEENEE 67
BLAST of CSPI02G01720 vs. NCBI nr
Match:
XP_011648680.1 (uncharacterized protein LOC101220819 [Cucumis sativus] >XP_011648681.1 uncharacterized protein LOC101220819 [Cucumis sativus] >KGN60679.1 hypothetical protein Csa_019520 [Cucumis sativus])
HSP 1 Score: 154.1 bits (388), Expect = 5.1e-34
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
Query: 1 MKKGLHPQLQYVSYVTPSGRLMSAMMTKAHNVSKVYHLRAKRQMIESIGQLAKFRRRYEM 60
MKKGLHPQLQYVSYVTPSGRLMSAMMTKAHNVSKVYHLRAKRQMIESIGQLAKFRRRYEM
Sbjct: 1 MKKGLHPQLQYVSYVTPSGRLMSAMMTKAHNVSKVYHLRAKRQMIESIGQLAKFRRRYEM 60
Query: 61 GNDENADNAENVENAEKK 79
GNDENADNAENVENAEKK
Sbjct: 61 GNDENADNAENVENAEKK 78
BLAST of CSPI02G01720 vs. NCBI nr
Match:
XP_008457569.1 (PREDICTED: uncharacterized protein LOC103497231 [Cucumis melo] >XP_016902259.1 PREDICTED: uncharacterized protein LOC103497231 [Cucumis melo] >XP_016902260.1 PREDICTED: uncharacterized protein LOC103497231 [Cucumis melo] >XP_016902262.1 PREDICTED: uncharacterized protein LOC103497231 [Cucumis melo])
HSP 1 Score: 142.5 bits (358), Expect = 1.5e-30
Identity = 71/78 (91.03%), Postives = 75/78 (96.15%), Query Frame = 0
Query: 1 MKKGLHPQLQYVSYVTPSGRLMSAMMTKAHNVSKVYHLRAKRQMIESIGQLAKFRRRYEM 60
MKKGLHPQLQYVSYVTPSGRLM AMMTK HNVSKVYHLRAKRQMIES+GQLAKF+RRYE+
Sbjct: 1 MKKGLHPQLQYVSYVTPSGRLMGAMMTKIHNVSKVYHLRAKRQMIESVGQLAKFKRRYEI 60
Query: 61 GNDENADNAENVENAEKK 79
GNDE+A NAENVENAEKK
Sbjct: 61 GNDEDAANAENVENAEKK 78
BLAST of CSPI02G01720 vs. NCBI nr
Match:
XP_022143125.1 (uncharacterized protein LOC111013069 [Momordica charantia] >XP_022143126.1 uncharacterized protein LOC111013069 [Momordica charantia])
HSP 1 Score: 107.5 bits (267), Expect = 5.5e-20
Identity = 55/77 (71.43%), Postives = 62/77 (80.52%), Query Frame = 0
Query: 1 MKKGLHPQLQYVSYVTPSGRLMSAMMTKAHNVSKVYHLRAKRQMIESIGQLAKFRRRYEM 60
MKKGLHPQ+Q++SYVT SGRLM MMTK H+V KVYH RAKRQM ES+GQ+AKF+RRYE
Sbjct: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHHVGKVYHFRAKRQMAESVGQIAKFKRRYEK 60
Query: 61 GNDENADNAENVENAEK 78
G AENVENAEK
Sbjct: 61 G------IAENVENAEK 71
BLAST of CSPI02G01720 vs. NCBI nr
Match:
XP_031286568.1 (uncharacterized protein LOC116145269 [Pistacia vera] >XP_031286569.1 uncharacterized protein LOC116145269 [Pistacia vera])
HSP 1 Score: 103.2 bits (256), Expect = 1.0e-18
Identity = 53/70 (75.71%), Postives = 58/70 (82.86%), Query Frame = 0
Query: 1 MKKGLHPQLQYVSYVTPSGRLMSAMMTKAHNVSKVYHLRAKRQMIESIGQLAKFRRRYEM 60
MKKGLHPQLQ+VSYVTP GRLM A MTK H+V KVYHLRAKRQM ESIGQ+AKF+RRY
Sbjct: 1 MKKGLHPQLQWVSYVTPCGRLMHATMTKIHHVGKVYHLRAKRQMAESIGQVAKFKRRY-- 60
Query: 61 GNDENADNAE 71
G EN +N E
Sbjct: 61 GQQENTENNE 68
BLAST of CSPI02G01720 vs. NCBI nr
Match:
KAF3453405.1 (hypothetical protein FNV43_RR03845 [Rhamnella rubrinervis])
HSP 1 Score: 102.8 bits (255), Expect = 1.4e-18
Identity = 48/64 (75.00%), Postives = 56/64 (87.50%), Query Frame = 0
Query: 1 MKKGLHPQLQYVSYVTPSGRLMSAMMTKAHNVSKVYHLRAKRQMIESIGQLAKFRRRYEM 60
M+KGLHPQ+Q++SYVT SGRLM MMTK HNV KVYHL+AKRQM ESIG +AKFR+RYE+
Sbjct: 16 MRKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHLKAKRQMAESIGPIAKFRKRYEV 75
Query: 61 GNDE 65
GN E
Sbjct: 76 GNTE 79
BLAST of CSPI02G01720 vs. TAIR 10
Match:
AT5G55125.1 (Ribosomal protein L31 )
HSP 1 Score: 92.4 bits (228), Expect = 1.7e-19
Identity = 49/79 (62.03%), Postives = 61/79 (77.22%), Query Frame = 0
Query: 1 MKKGLHPQLQYVSYVTPSGRLMSAMMTKAHNVSKVYHLRAKRQMIESIGQLAKFRRRYEM 60
MKKGLHPQ+Q++SYVT SGRLM MMT+ H+V KVYH AKRQM +SIGQ+AKF+RR+
Sbjct: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTRIHHVGKVYHFGAKRQMAQSIGQIAKFKRRF-- 60
Query: 61 GNDENADNAE--NVENAEK 78
N++ A+ AE N EN K
Sbjct: 61 -NEQEAEAAEENNNENQNK 76
BLAST of CSPI02G01720 vs. TAIR 10
Match:
AT5G55125.2 (Ribosomal protein L31 )
HSP 1 Score: 92.4 bits (228), Expect = 1.7e-19
Identity = 49/79 (62.03%), Postives = 61/79 (77.22%), Query Frame = 0
Query: 1 MKKGLHPQLQYVSYVTPSGRLMSAMMTKAHNVSKVYHLRAKRQMIESIGQLAKFRRRYEM 60
MKKGLHPQ+Q++SYVT SGRLM MMT+ H+V KVYH AKRQM +SIGQ+AKF+RR+
Sbjct: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTRIHHVGKVYHFGAKRQMAQSIGQIAKFKRRF-- 60
Query: 61 GNDENADNAE--NVENAEK 78
N++ A+ AE N EN K
Sbjct: 61 -NEQEAEAAEENNNENQNK 76
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LI20 | 2.5e-34 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006250 PE=4 SV=1 | [more] |
A0A1S4E202 | 7.5e-31 | 91.03 | uncharacterized protein LOC103497231 OS=Cucumis melo OX=3656 GN=LOC103497231 PE=... | [more] |
A0A6J1CPB3 | 2.7e-20 | 71.43 | uncharacterized protein LOC111013069 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
F6GUK5 | 1.5e-18 | 68.66 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g00680 PE=4 SV=... | [more] |
A0A438EM09 | 1.5e-18 | 68.66 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_076149 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_011648680.1 | 5.1e-34 | 100.00 | uncharacterized protein LOC101220819 [Cucumis sativus] >XP_011648681.1 uncharact... | [more] |
XP_008457569.1 | 1.5e-30 | 91.03 | PREDICTED: uncharacterized protein LOC103497231 [Cucumis melo] >XP_016902259.1 P... | [more] |
XP_022143125.1 | 5.5e-20 | 71.43 | uncharacterized protein LOC111013069 [Momordica charantia] >XP_022143126.1 uncha... | [more] |
XP_031286568.1 | 1.0e-18 | 75.71 | uncharacterized protein LOC116145269 [Pistacia vera] >XP_031286569.1 uncharacter... | [more] |
KAF3453405.1 | 1.4e-18 | 75.00 | hypothetical protein FNV43_RR03845 [Rhamnella rubrinervis] | [more] |