Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCCGCGGAGAGGCAATAGCTTCCAAAGAATCAGATTCAATGTGCAGCGAGGGAATAGAGTTACCAAACTGTTCACGCTTTCACCTCGACCACCTTGATTTTCCACATTATTCTAAATCTTTTGAAACCCACACCAATCAAAGAACCAGGGGAGTCACCAACGATCCAAACAATTTCTCCCAAACCAGAAGCATTACACCAAGACGCAGCAGCATTCATCTTCCAACTATCCTCCGACGGATTCCAAGTGTCGAGACTAAACCCCTTCTTAGGCGCCAAATCAAGGGAGCTCGAGACGATAGCAAAGGATTCTTGGATAGTCCTGCAATGAATTTGCACCAAGCTCGACACCAACAGACAACACCGGCGTAA
mRNA sequence
ATGTCCCGCGGAGAGGCAATAGCTTCCAAAGAATCAGATTCAATGTGCAGCGAGGGAATAGAGTTACCAAACTGTTCACGCTTTCACCTCGACCACCTTGATTTTCCACATTATTCTAAATCTTTTGAAACCCACACCAATCAAAGAACCAGGGGAGTCACCAACGATCCAAACAATTTCTCCCAAACCAGAAGCATTACACCAAGACGCAGCAGCATTCATCTTCCAACTATCCTCCGACGGATTCCAAGTGTCGAGACTAAACCCCTTCTTAGGCGCCAAATCAAGGGAGCTCGAGACGATAGCAAAGGATTCTTGGATAGTCCTGCAATGAATTTGCACCAAGCTCGACACCAACAGACAACACCGGCGTAA
Coding sequence (CDS)
ATGTCCCGCGGAGAGGCAATAGCTTCCAAAGAATCAGATTCAATGTGCAGCGAGGGAATAGAGTTACCAAACTGTTCACGCTTTCACCTCGACCACCTTGATTTTCCACATTATTCTAAATCTTTTGAAACCCACACCAATCAAAGAACCAGGGGAGTCACCAACGATCCAAACAATTTCTCCCAAACCAGAAGCATTACACCAAGACGCAGCAGCATTCATCTTCCAACTATCCTCCGACGGATTCCAAGTGTCGAGACTAAACCCCTTCTTAGGCGCCAAATCAAGGGAGCTCGAGACGATAGCAAAGGATTCTTGGATAGTCCTGCAATGAATTTGCACCAAGCTCGACACCAACAGACAACACCGGCGTAA
Protein sequence
MSRGEAIASKESDSMCSEGIELPNCSRFHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNFSQTRSITPRRSSIHLPTILRRIPSVETKPLLRRQIKGARDDSKGFLDSPAMNLHQARHQQTTPA*
Homology
BLAST of CSPI01G25790 vs. ExPASy TrEMBL
Match:
A0A0A0LW98 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560850 PE=4 SV=1)
HSP 1 Score: 243.0 bits (619), Expect = 6.4e-61
Identity = 120/124 (96.77%), Postives = 121/124 (97.58%), Query Frame = 0
Query: 1 MSRGEAIASKESDSMCSEGIELPNCSRFHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNF 60
MSRGEAIAS+ESDSMCSEGIELPNCSRFHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNF
Sbjct: 1 MSRGEAIASEESDSMCSEGIELPNCSRFHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNF 60
Query: 61 SQTRSITPRRSSIHLPTILRRIPSVETKPLLRRQIKGARDDSKGFLDSPAMNLHQARHQQ 120
SQTRSIT RR SIHLPTILRRIPSVETKPLLRRQIKGARDDSKG LDSPAMNLHQARHQQ
Sbjct: 61 SQTRSITSRRISIHLPTILRRIPSVETKPLLRRQIKGARDDSKGLLDSPAMNLHQARHQQ 120
Query: 121 TTPA 125
TTPA
Sbjct: 121 TTPA 124
BLAST of CSPI01G25790 vs. ExPASy TrEMBL
Match:
A0A0A0KDY3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G111920 PE=4 SV=1)
HSP 1 Score: 102.1 bits (253), Expect = 1.8e-18
Identity = 54/81 (66.67%), Postives = 63/81 (77.78%), Query Frame = 0
Query: 28 FHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNFSQTRSITPRRSSIHLPTILRRIPSVET 87
FHL+HLDF +SKS ETHTN++T G TN+P TR+ITPR IHLPTIL R+ S+ET
Sbjct: 7 FHLEHLDFSRHSKSLETHTNKKTSGATNNPP--FHTRNITPRCICIHLPTILWRLLSIET 66
Query: 88 KPLLRRQIKGARDDSKGFLDS 109
K LLR QIKGA DD+KGFLDS
Sbjct: 67 KLLLRHQIKGAPDDNKGFLDS 85
BLAST of CSPI01G25790 vs. ExPASy TrEMBL
Match:
A0A5A7U6P5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold761G001040 PE=4 SV=1)
HSP 1 Score: 63.5 bits (153), Expect = 7.0e-07
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 0
Query: 81 RIPSVETKPLLRRQIKGARDDSKGFLDSPAMNLH 115
++PSVETK LLRRQIKGARDDSKGFLDSPA NLH
Sbjct: 31 KLPSVETKLLLRRQIKGARDDSKGFLDSPATNLH 64
BLAST of CSPI01G25790 vs. NCBI nr
Match:
KGN66003.1 (hypothetical protein Csa_006997 [Cucumis sativus])
HSP 1 Score: 243.0 bits (619), Expect = 1.3e-60
Identity = 120/124 (96.77%), Postives = 121/124 (97.58%), Query Frame = 0
Query: 1 MSRGEAIASKESDSMCSEGIELPNCSRFHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNF 60
MSRGEAIAS+ESDSMCSEGIELPNCSRFHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNF
Sbjct: 1 MSRGEAIASEESDSMCSEGIELPNCSRFHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNF 60
Query: 61 SQTRSITPRRSSIHLPTILRRIPSVETKPLLRRQIKGARDDSKGFLDSPAMNLHQARHQQ 120
SQTRSIT RR SIHLPTILRRIPSVETKPLLRRQIKGARDDSKG LDSPAMNLHQARHQQ
Sbjct: 61 SQTRSITSRRISIHLPTILRRIPSVETKPLLRRQIKGARDDSKGLLDSPAMNLHQARHQQ 120
Query: 121 TTPA 125
TTPA
Sbjct: 121 TTPA 124
BLAST of CSPI01G25790 vs. NCBI nr
Match:
KGN46602.1 (hypothetical protein Csa_005079 [Cucumis sativus])
HSP 1 Score: 102.1 bits (253), Expect = 3.7e-18
Identity = 54/81 (66.67%), Postives = 63/81 (77.78%), Query Frame = 0
Query: 28 FHLDHLDFPHYSKSFETHTNQRTRGVTNDPNNFSQTRSITPRRSSIHLPTILRRIPSVET 87
FHL+HLDF +SKS ETHTN++T G TN+P TR+ITPR IHLPTIL R+ S+ET
Sbjct: 7 FHLEHLDFSRHSKSLETHTNKKTSGATNNPP--FHTRNITPRCICIHLPTILWRLLSIET 66
Query: 88 KPLLRRQIKGARDDSKGFLDS 109
K LLR QIKGA DD+KGFLDS
Sbjct: 67 KLLLRHQIKGAPDDNKGFLDS 85
BLAST of CSPI01G25790 vs. NCBI nr
Match:
KAA0050974.1 (hypothetical protein E6C27_scaffold761G001040 [Cucumis melo var. makuwa])
HSP 1 Score: 63.5 bits (153), Expect = 1.4e-06
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 0
Query: 81 RIPSVETKPLLRRQIKGARDDSKGFLDSPAMNLH 115
++PSVETK LLRRQIKGARDDSKGFLDSPA NLH
Sbjct: 31 KLPSVETKLLLRRQIKGARDDSKGFLDSPATNLH 64
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LW98 | 6.4e-61 | 96.77 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560850 PE=4 SV=1 | [more] |
A0A0A0KDY3 | 1.8e-18 | 66.67 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G111920 PE=4 SV=1 | [more] |
A0A5A7U6P5 | 7.0e-07 | 88.24 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KGN66003.1 | 1.3e-60 | 96.77 | hypothetical protein Csa_006997 [Cucumis sativus] | [more] |
KGN46602.1 | 3.7e-18 | 66.67 | hypothetical protein Csa_005079 [Cucumis sativus] | [more] |
KAA0050974.1 | 1.4e-06 | 88.24 | hypothetical protein E6C27_scaffold761G001040 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |