CSPI01G23590 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G23590
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr1: 19094977 .. 19095526 (+)
RNA-Seq ExpressionCSPI01G23590
SyntenyCSPI01G23590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCTGAAATGGAATCACATATCACATGGTTCATGGTCCGCACTTGATTTGGGCATTTCTGTCGTTGATTGAAGTTAGAAGTAGAACTCTGGAGATCCATAACACAATCCCATCAATGGCAATGACAATGACGCACACCCTTTGCCAAGTTGATCAGTGTCGTCACATGCACACAGCTCAGTTGTTGACAGCACAGCAGCGAGCAGCCCAACCAAACGACAGTGCACTTACCTCAACCAACCAAACGACAGCCCAACATGTTAATTTACTCTTTCACACCAGACCCACCTTCATAGCCACCCCATCCTCAAGCGCCTTAATTCAACAAGTGGTGAACCATTAACCTAACTTACGAAACAAACGGTATATGTGATTCGGTAGGTATGGTTACAATTACCACTGCTGGGTGATTCAGCTTCCATTGTTTAGTTTCCTTCAATAAACAAATGGTTCGACTACAATTTTACCCAAAAACTGAGGTAAATCAAACAACCTACAACCCTATGGTTAAGAAACTCAGACCACCCATGCGACAGTATTTGATAACAAAA

mRNA sequence

GTCTGAAATGGAATCACATATCACATGGTTCATGGTCCGCACTTGATTTGGGCATTTCTGTCGTTGATTGAAGTTAGAAGTAGAACTCTGGAGATCCATAACACAATCCCATCAATGGCAATGACAATGACGCACACCCTTTGCCAAGTTGATCAGTGTCGTCACATGCACACAGCTCAGTTGTTGACAGCACAGCAGCGAGCAGCCCAACCAAACGACAGTGCACTTACCTCAACCAACCAAACGACAGCCCAACATGTTAATTTACTCTTTCACACCAGACCCACCTTCATAGCCACCCCATCCTCAAGCGCCTTAATTCAACAAGTGGTGAACCATTAACCTAACTTACGAAACAAACGGTATATGTGATTCGGTAGGTATGGTTACAATTACCACTGCTGGGTGATTCAGCTTCCATTGTTTAGTTTCCTTCAATAAACAAATGGTTCGACTACAATTTTACCCAAAAACTGAGGTAAATCAAACAACCTACAACCCTATGGTTAAGAAACTCAGACCACCCATGCGACAGTATTTGATAACAAAA

Coding sequence (CDS)

ATGGTTCATGGTCCGCACTTGATTTGGGCATTTCTGTCGTTGATTGAAGTTAGAAGTAGAACTCTGGAGATCCATAACACAATCCCATCAATGGCAATGACAATGACGCACACCCTTTGCCAAGTTGATCAGTGTCGTCACATGCACACAGCTCAGTTGTTGACAGCACAGCAGCGAGCAGCCCAACCAAACGACAGTGCACTTACCTCAACCAACCAAACGACAGCCCAACATGTTAATTTACTCTTTCACACCAGACCCACCTTCATAGCCACCCCATCCTCAAGCGCCTTAATTCAACAAGTGGTGAACCATTAA

Protein sequence

MVHGPHLIWAFLSLIEVRSRTLEIHNTIPSMAMTMTHTLCQVDQCRHMHTAQLLTAQQRAAQPNDSALTSTNQTTAQHVNLLFHTRPTFIATPSSSALIQQVVNH*
Homology
[Close]
BLAST of CSPI01G23590 vs. ExPASy TrEMBL
Match: A0A0A0LVG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G527940 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 8.5e-46
Identity = 101/105 (96.19%), Postives = 101/105 (96.19%), Query Frame = 0 

Query: 1   MVHGPHLIWAFLSLIEVRSRTLEIHNTIPSMAMTMTHTLCQVDQCRHMHTAQLLTAQQRA 60
           MVHGPHLIWAFLSLIEV   TLEIHNTIPSMAMTMTHTLCQVDQC HMHTAQLLTAQQRA
Sbjct: 1   MVHGPHLIWAFLSLIEV---TLEIHNTIPSMAMTMTHTLCQVDQC-HMHTAQLLTAQQRA 60

Query: 61  AQPNDSALTSTNQTTAQHVNLLFHTRPTFIATPSSSALIQQVVNH 106
           AQPNDSALTSTNQTTAQHVNLLFHTRPTFIATPSSSALIQQVVNH
Sbjct: 61  AQPNDSALTSTNQTTAQHVNLLFHTRPTFIATPSSSALIQQVVNH 101

[Close]
BLAST of CSPI01G23590 vs. NCBI nr
Match: KGN65778.1 (hypothetical protein Csa_023276 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 1.7e-45
Identity = 101/105 (96.19%), Postives = 101/105 (96.19%), Query Frame = 0 

Query: 1   MVHGPHLIWAFLSLIEVRSRTLEIHNTIPSMAMTMTHTLCQVDQCRHMHTAQLLTAQQRA 60
           MVHGPHLIWAFLSLIEV   TLEIHNTIPSMAMTMTHTLCQVDQC HMHTAQLLTAQQRA
Sbjct: 1   MVHGPHLIWAFLSLIEV---TLEIHNTIPSMAMTMTHTLCQVDQC-HMHTAQLLTAQQRA 60

Query: 61  AQPNDSALTSTNQTTAQHVNLLFHTRPTFIATPSSSALIQQVVNH 106
           AQPNDSALTSTNQTTAQHVNLLFHTRPTFIATPSSSALIQQVVNH
Sbjct: 61  AQPNDSALTSTNQTTAQHVNLLFHTRPTFIATPSSSALIQQVVNH 101

The following BLAST results are available for this feature:
BLAST of CSPI01G23590 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI01G23590 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVG58.5e-4696.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G527940 PE=4 SV=1[more]
BLAST of CSPI01G23590 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65778.11.7e-4596.19hypothetical protein Csa_023276 [Cucumis sativus][more]
BLAST of CSPI01G23590 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G23590.1CSPI01G23590.1mRNA