CSPI01G23470 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATTAAAAAAAAGAAAGAGTAGGTGTCAAATGGTGAGAGGTGAACACACATGAAAAATGATAAACCGGCGGTGCACCAAATCAGGCGTTTAGTCATAGAAGTCACAATGAGTGTACGAACAAATCCATTTAATACTGAAACAGACGGCGTTCTTATCACTTATCACAAACCAATCGCCCTTCCCAATACCACACACGAGAATTTCCCGGCACCGGAGCCACCATGGACGCTGCCACCGAAGCTCACAACCATCATATGCACGGCATGACACCGCCACCGGACTCCTCCACCGCATCGCCGGAAATGATGCACCACAAGATGATGATGCACATGACCTTCTTTTGGGGAACCAACGCCGAGATTCTGTTCCATCGCTGGCCTGGCGAGCGCTCCGGCATGTACGCCTTAGCCTTAATCTTCATCTTCGTGCTTGCTTTTCTCGTCGAATGGCTTACACATTGCCGATTGATTAAGGAAGATTCGAGCCGGGCAGCGGCAGGATTGATCCGGACTCTGATGCATACGGTTAGGGTTGGATTAGCGTATTTAGTGATGCTTGCGGTGATGTCGTTCAATGTTGGAGTGCTTTTGGTAGCAATCGGTGGACATTGCTTGGGATTTTTCTTGTTTGGGAGTAAATTTTTCAAGAGATCGGAAGCGGTTTCTGGTAAATCCTCTGATCTTCCTCCTCTTAGTTGTTGATGAAGGGATAATAATGTGGAAATCTGGAATTGAAATTGAATGTTATGATAGTGTATTGAATGTTGGTGATGAATTTTTCTTGGATTGGATTAGAAACGAAATTTGTTGTTGGAATTCTTTGCAGCTTATGTCAAGTTGTAAACGGAAGAGGGGAAATGGTAAATTGGAAATGCTTTGGATTCAGATTTCAGGGATAATTCATCTTGTAATTTTTCTATCTCACTGTTCATCGTTTTCATTTAGGATTTTAATTTTGTAATTGTAAGCAAGAACTATGAAGATATTTAGTGGTGTTTAGGATTCATAGTCGCTATCTAAACTTAGAATTCATGAGTGTTCATTCATATTGTGAAATTTTTCAATGATAATGTTAAATTTTTCTA AAATTAAAAAAAAGAAAGAGTAGGTGTCAAATGGTGAGAGGTGAACACACATGAAAAATGATAAACCGGCGGTGCACCAAATCAGGCGTTTAGTCATAGAAGTCACAATGAGTGTACGAACAAATCCATTTAATACTGAAACAGACGGCGTTCTTATCACTTATCACAAACCAATCGCCCTTCCCAATACCACACACGAGAATTTCCCGGCACCGGAGCCACCATGGACGCTGCCACCGAAGCTCACAACCATCATATGCACGGCATGACACCGCCACCGGACTCCTCCACCGCATCGCCGGAAATGATGCACCACAAGATGATGATGCACATGACCTTCTTTTGGGGAACCAACGCCGAGATTCTGTTCCATCGCTGGCCTGGCGAGCGCTCCGGCATGTACGCCTTAGCCTTAATCTTCATCTTCGTGCTTGCTTTTCTCGTCGAATGGCTTACACATTGCCGATTGATTAAGGAAGATTCGAGCCGGGCAGCGGCAGGATTGATCCGGACTCTGATGCATACGGTTAGGGTTGGATTAGCGTATTTAGTGATGCTTGCGGTGATGTCGTTCAATGTTGGAGTGCTTTTGGTAGCAATCGGTGGACATTGCTTGGGATTTTTCTTGTTTGGGAGTAAATTTTTCAAGAGATCGGAAGCGGTTTCTGCTTATGTCAAGTTGTAAACGGAAGAGGGGAAATGGTAAATTGGAAATGCTTTGGATTCAGATTTCAGGGATAATTCATCTTGTAATTTTTCTATCTCACTGTTCATCGTTTTCATTTAGGATTTTAATTTTGTAATTGTAAGCAAGAACTATGAAGATATTTAGTGGTGTTTAGGATTCATAGTCGCTATCTAAACTTAGAATTCATGAGTGTTCATTCATATTGTGAAATTTTTCAATGATAATGTTAAATTTTTCTA ATGGACGCTGCCACCGAAGCTCACAACCATCATATGCACGGCATGACACCGCCACCGGACTCCTCCACCGCATCGCCGGAAATGATGCACCACAAGATGATGATGCACATGACCTTCTTTTGGGGAACCAACGCCGAGATTCTGTTCCATCGCTGGCCTGGCGAGCGCTCCGGCATGTACGCCTTAGCCTTAATCTTCATCTTCGTGCTTGCTTTTCTCGTCGAATGGCTTACACATTGCCGATTGATTAAGGAAGATTCGAGCCGGGCAGCGGCAGGATTGATCCGGACTCTGATGCATACGGTTAGGGTTGGATTAGCGTATTTAGTGATGCTTGCGGTGATGTCGTTCAATGTTGGAGTGCTTTTGGTAGCAATCGGTGGACATTGCTTGGGATTTTTCTTGTTTGGGAGTAAATTTTTCAAGAGATCGGAAGCGGTTTCTGCTTATGTCAAGTTGTAA MDAATEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMYALALIFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVLLVAIGGHCLGFFLFGSKFFKRSEAVSAYVKL* Homology
BLAST of CSPI01G23470 vs. ExPASy Swiss-Prot
Match: Q39065 (Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2) HSP 1 Score: 168.7 bits (426), Expect = 5.4e-41 Identity = 91/165 (55.15%), Postives = 111/165 (67.27%), Query Frame = 0
BLAST of CSPI01G23470 vs. ExPASy Swiss-Prot
Match: Q9STG2 (Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 2.1e-37 Identity = 83/150 (55.33%), Postives = 102/150 (68.00%), Query Frame = 0
BLAST of CSPI01G23470 vs. ExPASy Swiss-Prot
Match: Q8GWP3 (Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.1e-30 Identity = 70/131 (53.44%), Postives = 88/131 (67.18%), Query Frame = 0
BLAST of CSPI01G23470 vs. ExPASy Swiss-Prot
Match: Q94EE4 (Copper transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT1 PE=2 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 6.8e-28 Identity = 72/134 (53.73%), Postives = 85/134 (63.43%), Query Frame = 0
BLAST of CSPI01G23470 vs. ExPASy Swiss-Prot
Match: Q8SAA5 (Copper transporter 4 OS=Arabidopsis thaliana OX=3702 GN=COPT4 PE=2 SV=2) HSP 1 Score: 120.2 bits (300), Expect = 2.2e-26 Identity = 61/128 (47.66%), Postives = 82/128 (64.06%), Query Frame = 0
BLAST of CSPI01G23470 vs. ExPASy TrEMBL
Match: A0A5A7SLZ1 (Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001730 PE=3 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 1.3e-82 Identity = 155/159 (97.48%), Postives = 157/159 (98.74%), Query Frame = 0
BLAST of CSPI01G23470 vs. ExPASy TrEMBL
Match: A0A0A0LVF3 (Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_1G526830 PE=3 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 1.7e-77 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of CSPI01G23470 vs. ExPASy TrEMBL
Match: A0A1S3C5M2 (Copper transporter OS=Cucumis melo OX=3656 GN=LOC103497118 PE=3 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 2.0e-75 Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of CSPI01G23470 vs. ExPASy TrEMBL
Match: A0A6J1KFM2 (Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111493432 PE=3 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 2.4e-60 Identity = 121/148 (81.76%), Postives = 127/148 (85.81%), Query Frame = 0
BLAST of CSPI01G23470 vs. ExPASy TrEMBL
Match: A0A6J1G9U6 (Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111452256 PE=3 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 3.5e-59 Identity = 120/148 (81.08%), Postives = 125/148 (84.46%), Query Frame = 0
BLAST of CSPI01G23470 vs. NCBI nr
Match: KAA0031770.1 (copper transporter 1 [Cucumis melo var. makuwa] >TYJ97362.1 copper transporter 1 [Cucumis melo var. makuwa]) HSP 1 Score: 315.5 bits (807), Expect = 2.7e-82 Identity = 155/159 (97.48%), Postives = 157/159 (98.74%), Query Frame = 0
BLAST of CSPI01G23470 vs. NCBI nr
Match: KAE8653274.1 (hypothetical protein Csa_023259 [Cucumis sativus]) HSP 1 Score: 298.5 bits (763), Expect = 3.4e-77 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of CSPI01G23470 vs. NCBI nr
Match: XP_004145275.1 (copper transporter 1 [Cucumis sativus] >XP_031741185.1 copper transporter 1-like [Cucumis sativus]) HSP 1 Score: 298.5 bits (763), Expect = 3.4e-77 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of CSPI01G23470 vs. NCBI nr
Match: KGN66186.2 (hypothetical protein Csa_019561 [Cucumis sativus]) HSP 1 Score: 295.8 bits (756), Expect = 2.2e-76 Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of CSPI01G23470 vs. NCBI nr
Match: XP_008457427.1 (PREDICTED: copper transporter 1 [Cucumis melo]) HSP 1 Score: 291.6 bits (745), Expect = 4.2e-75 Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of CSPI01G23470 vs. TAIR 10
Match: AT5G59030.1 (copper transporter 1 ) HSP 1 Score: 168.7 bits (426), Expect = 3.8e-42 Identity = 91/165 (55.15%), Postives = 111/165 (67.27%), Query Frame = 0
BLAST of CSPI01G23470 vs. TAIR 10
Match: AT3G46900.1 (copper transporter 2 ) HSP 1 Score: 156.8 bits (395), Expect = 1.5e-38 Identity = 83/150 (55.33%), Postives = 102/150 (68.00%), Query Frame = 0
BLAST of CSPI01G23470 vs. TAIR 10
Match: AT2G26975.1 (Ctr copper transporter family ) HSP 1 Score: 134.4 bits (337), Expect = 8.0e-32 Identity = 70/131 (53.44%), Postives = 88/131 (67.18%), Query Frame = 0
BLAST of CSPI01G23470 vs. TAIR 10
Match: AT2G37925.1 (copper transporter 4 ) HSP 1 Score: 120.2 bits (300), Expect = 1.6e-27 Identity = 61/128 (47.66%), Postives = 82/128 (64.06%), Query Frame = 0
BLAST of CSPI01G23470 vs. TAIR 10
Match: AT5G59040.1 (copper transporter 3 ) HSP 1 Score: 111.7 bits (278), Expect = 5.5e-25 Identity = 62/143 (43.36%), Postives = 84/143 (58.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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