CSPI01G13290 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G13290
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr1: 8776339 .. 8776638 (+)
RNA-Seq ExpressionCSPI01G13290
SyntenyCSPI01G13290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAATGAAGGCATTTTTTCAAACACCTTCAAGTGCACGATCGAACTTATTGTTACTCAGAAAAGGACCTTTCTACTCATTCTAGTCGCCACCCTCTCTTCAACAAGTCGTCATCGTCCGCTTTGGGTCTCGTTCGTTTGTTGTCATGTCTCCTAGTCGCCATCTCGACACAGCCGTAGATTGAAAGCTCAACGACTATTTGACTCTCTTACATCCATTCCTTGCACCATTGCCAACTCCAGTTTTCCTTCGCCGTTCAAGTCGCACCATCATAGCAGGTGTTTCACCGGATTATAG

mRNA sequence

ATGGAAAATGAAGGCATTTTTTCAAACACCTTCAAGTGCACGATCGAACTTATTGTTACTCAGAAAAGGACCTTTCTACTCATTCTAGTCGCCACCCTCTCTTCAACAAGTCGTCATCGTCCGCTTTGGTCGCCATCTCGACACAGCCGTAGATTGAAAGCTCAACGACTATTTGACTCTCTTACATCCATTCCTTGCACCATTGCCAACTCCAGTTTTCCTTCGCCGTTCAAGTCGCACCATCATAGCAGGTGTTTCACCGGATTATAG

Coding sequence (CDS)

ATGGAAAATGAAGGCATTTTTTCAAACACCTTCAAGTGCACGATCGAACTTATTGTTACTCAGAAAAGGACCTTTCTACTCATTCTAGTCGCCACCCTCTCTTCAACAAGTCGTCATCGTCCGCTTTGGTCGCCATCTCGACACAGCCGTAGATTGAAAGCTCAACGACTATTTGACTCTCTTACATCCATTCCTTGCACCATTGCCAACTCCAGTTTTCCTTCGCCGTTCAAGTCGCACCATCATAGCAGGTGTTTCACCGGATTATAG

Protein sequence

MENEGIFSNTFKCTIELIVTQKRTFLLILVATLSSTSRHRPLWSPSRHSRRLKAQRLFDSLTSIPCTIANSSFPSPFKSHHHSRCFTGL*
Homology
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BLAST of CSPI01G13290 vs. NCBI nr
Match: KAE8652756.1 (hypothetical protein Csa_023790, partial [Cucumis sativus])

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-17
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 44 SPSRHSRRLKAQRLFDSLTSIPCTIANSSFPSPFKSHHHSRCFTGL 90
          SPSRHSRRLKAQRLFDSLTSIPCTIANSSFPSPFKSHHHSRCFTGL
Sbjct: 1  SPSRHSRRLKAQRLFDSLTSIPCTIANSSFPSPFKSHHHSRCFTGL 46

The following BLAST results are available for this feature:
BLAST of CSPI01G13290 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI01G13290 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI01G13290 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652756.11.3e-17100.00hypothetical protein Csa_023790, partial [Cucumis sativus][more]
BLAST of CSPI01G13290 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G13290.1CSPI01G13290.1mRNA