CSPI01G13090 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTAATATGATAGTATCAATAAGAGTTAGAAAAGCTTACAAATCTGGTAGCTTCGATTGCTTTTAAGACAGTAACAATTGATATTTTCTGCTACTTCCCTTTGCTTTCTTCTCTGGGTTTACATGAAAGTGTCACTTTCGCTACAAGGAGGAGGGGCTTGTGATGGGGGTGTGCCACACTGGATAATACCCCTTCCTCTCGCAAATTCTTGTCTTGTCTATACAAACAACAAGTGGGAAAAGCTTATTTCAGACAGTAAGTTGAAATTCCGTGTAGTTGTCAGTCTCCCTTGCTTCATCCTAAAGAAAGGCAACAATCTGATTCTCTCCCTTTTAATCTTTTAAACTCTTCTATCATTTGTTCCATACTCGTTTCATCTAACGGATCTCAAGATTATTTGAAGCAGCAGTTCAATTACCTTAGGACTCCCAGCTTCCTTCTCACTATTCAATTACCTTGGCAAATTCCATGATATGTAAACTTGTTCGTGGAGACCAAACATCGATATGATTGAACAAAATGAAGGATCAAGTGGGATAACAAGCCCAGATGAACCTAAGACAATTGTTGCATCGCCGTCGAGACCTCGTGAAGCGAAAGGGGTAATTGGAGGGGAAGGTGGGACCTGTGTGCGTGAGAATGAGGAGAATAGCAAGAGGCATGGAGTGGAGATGCTAGAGACCAGCTCACAGCCAGAGAGTCATCAAAACTGCATCATTGATATAAAAACCAATGGAGAGTCAGTGGATGATGAAGATTCTAGTGAAGAAAAGGTTTGCAGGATATGTCATTTGGGCTCCGAAAACGAGTCGATAACTTCAGAACTCATACACCTCGGGTGTAGCTGCAAAGATGAGCTTGGAATATCACATCGTGACTGCGCCGAGATTTGGTTTATGCATCGAGGCAACAGGTAAAATTCCTATGACGATCTTCATCCTCTCCTCTCTTCACAGTTTCCAATAACAGATATGGTGCTCTTAATATAACTCCAATTCTGTATCATCCCTTTCTAATGGTAGACAATGTGAGATTTGTGGTCAGACTGCAACAAATGTGAGGAGAAACAGGAGTAGCCATTTTGCAATACATCGGAATGAGAGGAGATTGGTAGCAAGCTCAACAGTGTCGACAGTGTCCTTGGACAATGAGGTTTCATTATCATGTTGCTGGGGGCAGCGCTTCTGTAATTTCCTATTAACATGTACAGTTCTAGCCTTCCTCCTCCCATGGTTTTTTCGTGCCGATTTCTTTGGATGATGAGCGATGGTCTTTCTCAAACATCCTATCATCACATTAATCAGCTACAAAGATTCCAGACGTGCAATCCCGGACCTGGGAATAAGCAGATGCAACAGTTTCACACAAGGAAGAATTGACAAACATGTAAATATATAGAACAGTGCATATAAAAATGCTAACTCACAATAATTCTATATCAAGAGTAAGAAAATTAAAAATAGTTAGCCAGAGAGAGAGAGAAAGAGATTGCAATGCAAACAATAGAAATGGTTATAATTTACTAAACTATTTACCTTTCCATATTAAAATGTATTTTCTAAGTCATGTCTTTGTCGAGGCATCAAACAAAAAGGCAGGCACTAAGCATAGAGATTAAAAAAATAGATCTTTATATGGCGGCTCCTGCTTTTCTAGTTTCTAACCATAATCACCTAGCA AGTAATATGATAGTATCAATAAGAGTTAGAAAAGCTTACAAATCTGGTAGCTTCGATTGCTTTTAAGACAGTAACAATTGATATTTTCTGCTACTTCCCTTTGCTTTCTTCTCTGGGTTTACATGAAAGTGTCACTTTCGCTACAAGGAGGAGGGGCTTGTGATGGGGGTGTGCCACACTGGATAATACCCCTTCCTCTCGCAAATTCTTGTCTTGTCTATACAAACAACAAGTGGGAAAAGCTTATTTCAGACAGTAAGTTGAAATTCCGTGTAGTTGTCAGTCTCCCTTGCTTCATCCTAAAGAAAGGCAACAATCTGATTCTCTCCCTTTTAATCTTTTAAACTCTTCTATCATTTGTTCCATACTCGTTTCATCTAACGGATCTCAAGATTATTTGAAGCAGCAGTTCAATTACCTTAGGACTCCCAGCTTCCTTCTCACTATTCAATTACCTTGGCAAATTCCATGATATGTAAACTTGTTCGTGGAGACCAAACATCGATATGATTGAACAAAATGAAGGATCAAGTGGGATAACAAGCCCAGATGAACCTAAGACAATTGTTGCATCGCCGTCGAGACCTCGTGAAGCGAAAGGGGTAATTGGAGGGGAAGGTGGGACCTGTGTGCGTGAGAATGAGGAGAATAGCAAGAGGCATGGAGTGGAGATGCTAGAGACCAGCTCACAGCCAGAGAGTCATCAAAACTGCATCATTGATATAAAAACCAATGGAGAGTCAGTGGATGATGAAGATTCTAGTGAAGAAAAGGTTTGCAGGATATGTCATTTGGGCTCCGAAAACGAGTCGATAACTTCAGAACTCATACACCTCGGGTGTAGCTGCAAAGATGAGCTTGGAATATCACATCGTGACTGCGCCGAGATTTGGTTTATGCATCGAGGCAACAGACAATGTGAGATTTGTGGTCAGACTGCAACAAATGTGAGGAGAAACAGGAGTAGCCATTTTGCAATACATCGGAATGAGAGGAGATTGGTAGCAAGCTCAACAGTGTCGACAGTGTCCTTGGACAATGAGGTTTCATTATCATGTTGCTGGGGGCAGCGCTTCTGTAATTTCCTATTAACATGTACAGTTCTAGCCTTCCTCCTCCCATGGTTTTTTCGTGCCGATTTCTTTGGATGATGAGCGATGGTCTTTCTCAAACATCCTATCATCACATTAATCAGCTACAAAGATTCCAGACGTGCAATCCCGGACCTGGGAATAAGCAGATGCAACAGTTTCACACAAGGAAGAATTGACAAACATGTAAATATATAGAACAGTGCATATAAAAATGCTAACTCACAATAATTCTATATCAAGAGTAAGAAAATTAAAAATAGTTAGCCAGAGAGAGAGAGAAAGAGATTGCAATGCAAACAATAGAAATGGTTATAATTTACTAAACTATTTACCTTTCCATATTAAAATGTATTTTCTAAGTCATGTCTTTGTCGAGGCATCAAACAAAAAGGCAGGCACTAAGCATAGAGATTAAAAAAATAGATCTTTATATGGCGGCTCCTGCTTTTCTAGTTTCTAACCATAATCACCTAGCA ATGATTGAACAAAATGAAGGATCAAGTGGGATAACAAGCCCAGATGAACCTAAGACAATTGTTGCATCGCCGTCGAGACCTCGTGAAGCGAAAGGGGTAATTGGAGGGGAAGGTGGGACCTGTGTGCGTGAGAATGAGGAGAATAGCAAGAGGCATGGAGTGGAGATGCTAGAGACCAGCTCACAGCCAGAGAGTCATCAAAACTGCATCATTGATATAAAAACCAATGGAGAGTCAGTGGATGATGAAGATTCTAGTGAAGAAAAGGTTTGCAGGATATGTCATTTGGGCTCCGAAAACGAGTCGATAACTTCAGAACTCATACACCTCGGGTGTAGCTGCAAAGATGAGCTTGGAATATCACATCGTGACTGCGCCGAGATTTGGTTTATGCATCGAGGCAACAGACAATGTGAGATTTGTGGTCAGACTGCAACAAATGTGAGGAGAAACAGGAGTAGCCATTTTGCAATACATCGGAATGAGAGGAGATTGGTAGCAAGCTCAACAGTGTCGACAGTGTCCTTGGACAATGAGGTTTCATTATCATGTTGCTGGGGGCAGCGCTTCTGTAATTTCCTATTAACATGTACAGTTCTAGCCTTCCTCCTCCCATGGTTTTTTCGTGCCGATTTCTTTGGATGA MIEQNEGSSGITSPDEPKTIVASPSRPREAKGVIGGEGGTCVRENEENSKRHGVEMLETSSQPESHQNCIIDIKTNGESVDDEDSSEEKVCRICHLGSENESITSELIHLGCSCKDELGISHRDCAEIWFMHRGNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASSTVSTVSLDNEVSLSCCWGQRFCNFLLTCTVLAFLLPWFFRADFFG* Homology
BLAST of CSPI01G13090 vs. ExPASy Swiss-Prot
Match: F4JKK0 (Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.5e-06 Identity = 33/115 (28.70%), Postives = 46/115 (40.00%), Query Frame = 0
BLAST of CSPI01G13090 vs. ExPASy Swiss-Prot
Match: Q32L65 (E3 ubiquitin-protein ligase MARCHF2 OS=Bos taurus OX=9913 GN=MARCHF2 PE=2 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 4.9e-05 Identity = 25/71 (35.21%), Postives = 32/71 (45.07%), Query Frame = 0
BLAST of CSPI01G13090 vs. ExPASy Swiss-Prot
Match: Q68FA7 (E3 ubiquitin-protein ligase MARCHF3 OS=Xenopus tropicalis OX=8364 GN=marchf3 PE=2 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 3.2e-04 Identity = 22/69 (31.88%), Postives = 31/69 (44.93%), Query Frame = 0
BLAST of CSPI01G13090 vs. ExPASy TrEMBL
Match: A0A0A0LUV6 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G096610 PE=4 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 8.9e-119 Identity = 213/214 (99.53%), Postives = 213/214 (99.53%), Query Frame = 0
BLAST of CSPI01G13090 vs. ExPASy TrEMBL
Match: A0A1S3CJ88 (probable E3 ubiquitin ligase SUD1 OS=Cucumis melo OX=3656 GN=LOC103501475 PE=4 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 3.1e-111 Identity = 203/214 (94.86%), Postives = 209/214 (97.66%), Query Frame = 0
BLAST of CSPI01G13090 vs. ExPASy TrEMBL
Match: A0A6J1D2I2 (uncharacterized protein LOC111016745 OS=Momordica charantia OX=3673 GN=LOC111016745 PE=4 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 1.4e-79 Identity = 159/216 (73.61%), Postives = 174/216 (80.56%), Query Frame = 0
BLAST of CSPI01G13090 vs. ExPASy TrEMBL
Match: A0A6J1ESF7 (uncharacterized protein LOC111437147 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437147 PE=4 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 4.2e-76 Identity = 149/213 (69.95%), Postives = 171/213 (80.28%), Query Frame = 0
BLAST of CSPI01G13090 vs. ExPASy TrEMBL
Match: A0A6J1JNU4 (uncharacterized protein LOC111486158 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486158 PE=4 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 1.0e-74 Identity = 147/213 (69.01%), Postives = 169/213 (79.34%), Query Frame = 0
BLAST of CSPI01G13090 vs. NCBI nr
Match: XP_011653704.1 (probable E3 ubiquitin ligase SUD1 isoform X1 [Cucumis sativus] >KGN64779.1 hypothetical protein Csa_013679 [Cucumis sativus]) HSP 1 Score: 436.0 bits (1120), Expect = 1.8e-118 Identity = 213/214 (99.53%), Postives = 213/214 (99.53%), Query Frame = 0
BLAST of CSPI01G13090 vs. NCBI nr
Match: XP_008463280.1 (PREDICTED: probable E3 ubiquitin ligase SUD1 [Cucumis melo]) HSP 1 Score: 411.0 bits (1055), Expect = 6.3e-111 Identity = 203/214 (94.86%), Postives = 209/214 (97.66%), Query Frame = 0
BLAST of CSPI01G13090 vs. NCBI nr
Match: XP_038887762.1 (probable E3 ubiquitin ligase SUD1 [Benincasa hispida]) HSP 1 Score: 371.7 bits (953), Expect = 4.3e-99 Identity = 184/214 (85.98%), Postives = 195/214 (91.12%), Query Frame = 0
BLAST of CSPI01G13090 vs. NCBI nr
Match: XP_022147939.1 (uncharacterized protein LOC111016745 [Momordica charantia]) HSP 1 Score: 305.8 bits (782), Expect = 2.9e-79 Identity = 159/216 (73.61%), Postives = 174/216 (80.56%), Query Frame = 0
BLAST of CSPI01G13090 vs. NCBI nr
Match: KAG7022941.1 (hypothetical protein SDJN02_16677 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 294.7 bits (753), Expect = 6.6e-76 Identity = 150/213 (70.42%), Postives = 169/213 (79.34%), Query Frame = 0
BLAST of CSPI01G13090 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 102.4 bits (254), Expect = 4.5e-22 Identity = 59/143 (41.26%), Postives = 79/143 (55.24%), Query Frame = 0
BLAST of CSPI01G13090 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 93.2 bits (230), Expect = 2.7e-19 Identity = 51/125 (40.80%), Postives = 68/125 (54.40%), Query Frame = 0
BLAST of CSPI01G13090 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 84.3 bits (207), Expect = 1.3e-16 Identity = 50/136 (36.76%), Postives = 66/136 (48.53%), Query Frame = 0
BLAST of CSPI01G13090 vs. TAIR 10
Match: AT2G34200.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 82.8 bits (203), Expect = 3.7e-16 Identity = 53/134 (39.55%), Postives = 69/134 (51.49%), Query Frame = 0
BLAST of CSPI01G13090 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 72.0 bits (175), Expect = 6.5e-13 Identity = 59/207 (28.50%), Postives = 85/207 (41.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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