CSPI01G07880 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G07880
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RING-type domain-containing protein
Location	Chr1: 4971557 .. 4972494 (+)
RNA-Seq Expression	CSPI01G07880
Synteny	CSPI01G07880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATTACTTCTACATTACTCCATCTCTCGATTCCCTTCCAATTATTTATTAAAATTCCTTCCTTTTTTCTGTTTCTCTCCCAAATTCTCCTCTAATTAACCATCTAAAATCCATGTCCACCCCCGCCATCTCCGGCCTCCACTGCGAGGTCTGGCAGCCCCAAGACTTCTCCGAACCTTCCTGTTCGTCTTCTTCTTCTTCTTCTCAATTTCAACCCCCTGAATTCTTCATCGATTTCTACGTTTCCTCTTACGCAACTCATGGCGACGAAGTCATCAGCACACTCCGTTACAAGAATTTCCGGCAAAGATGTGACGTTCTAACTCAAGATTCTTTCTCTTGGTCTGCAATTTCCTCTATGCTTTCAGAAACCAATGTCCCTTATCATCTTCAACCTTTTTTCATTCACCAAATTTCTACTAGAGCTCGTGGAATCGCAACCGAACCCATTAACGCTCTCTCCCGAACCATTCCGATGGTCGTCGAGCTGATACTCCCCGAAGACGCCATGGAAGATTCCGGTTATGGGTCCGAACCCCACATGGGAATTGGGTCGGGTCGGGCCAGTAGGGCTTCGATTCAGGAAATGGAGAGAATTGAAATTGATGGGGTTTTGAGTGATTGTGTGATCTGTTTGGATGAGATTGGTTCAATTGGGTGTGAAATTGATGTTGTTCAAATGCCTTGTTTACATGTTTATCATCTAAATTGTATTCATAAATGGCTGGAACTCAGTAATCGTTGCCCATTGTGTCGGTTTCAGATGCCATTGGAAGAAGAATGAAGCTCTGTTTTTTCTTTTCTTGCTCCATTTTGTAAACATGTTTACCTTTCTTTATTGTATTTCTTTTTTCAAACCATCCTTGGAAGGATTATGAATTCAAAACCCCACATTTTCTAAAGATTACTAATGTAAATGATTTGTCAACACTTATATG

mRNA sequence

CCATTACTTCTACATTACTCCATCTCTCGATTCCCTTCCAATTATTTATTAAAATTCCTTCCTTTTTTCTGTTTCTCTCCCAAATTCTCCTCTAATTAACCATCTAAAATCCATGTCCACCCCCGCCATCTCCGGCCTCCACTGCGAGGTCTGGCAGCCCCAAGACTTCTCCGAACCTTCCTGTTCGTCTTCTTCTTCTTCTTCTCAATTTCAACCCCCTGAATTCTTCATCGATTTCTACGTTTCCTCTTACGCAACTCATGGCGACGAAGTCATCAGCACACTCCGTTACAAGAATTTCCGGCAAAGATGTGACGTTCTAACTCAAGATTCTTTCTCTTGGTCTGCAATTTCCTCTATGCTTTCAGAAACCAATGTCCCTTATCATCTTCAACCTTTTTTCATTCACCAAATTTCTACTAGAGCTCGTGGAATCGCAACCGAACCCATTAACGCTCTCTCCCGAACCATTCCGATGGTCGTCGAGCTGATACTCCCCGAAGACGCCATGGAAGATTCCGGTTATGGGTCCGAACCCCACATGGGAATTGGGTCGGGTCGGGCCAGTAGGGCTTCGATTCAGGAAATGGAGAGAATTGAAATTGATGGGGTTTTGAGTGATTGTGTGATCTGTTTGGATGAGATTGGTTCAATTGGGTGTGAAATTGATGTTGTTCAAATGCCTTGTTTACATGTTTATCATCTAAATTGTATTCATAAATGGCTGGAACTCAGTAATCGTTGCCCATTGTGTCGGTTTCAGATGCCATTGGAAGAAGAATGAAGCTCTGTTTTTTCTTTTCTTGCTCCATTTTGTAAACATGTTTACCTTTCTTTATTGTATTTCTTTTTTCAAACCATCCTTGGAAGGATTATGAATTCAAAACCCCACATTTTCTAAAGATTACTAATGTAAATGATTTGTCAACACTTATATG

Coding sequence (CDS)

ATGTCCACCCCCGCCATCTCCGGCCTCCACTGCGAGGTCTGGCAGCCCCAAGACTTCTCCGAACCTTCCTGTTCGTCTTCTTCTTCTTCTTCTCAATTTCAACCCCCTGAATTCTTCATCGATTTCTACGTTTCCTCTTACGCAACTCATGGCGACGAAGTCATCAGCACACTCCGTTACAAGAATTTCCGGCAAAGATGTGACGTTCTAACTCAAGATTCTTTCTCTTGGTCTGCAATTTCCTCTATGCTTTCAGAAACCAATGTCCCTTATCATCTTCAACCTTTTTTCATTCACCAAATTTCTACTAGAGCTCGTGGAATCGCAACCGAACCCATTAACGCTCTCTCCCGAACCATTCCGATGGTCGTCGAGCTGATACTCCCCGAAGACGCCATGGAAGATTCCGGTTATGGGTCCGAACCCCACATGGGAATTGGGTCGGGTCGGGCCAGTAGGGCTTCGATTCAGGAAATGGAGAGAATTGAAATTGATGGGGTTTTGAGTGATTGTGTGATCTGTTTGGATGAGATTGGTTCAATTGGGTGTGAAATTGATGTTGTTCAAATGCCTTGTTTACATGTTTATCATCTAAATTGTATTCATAAATGGCTGGAACTCAGTAATCGTTGCCCATTGTGTCGGTTTCAGATGCCATTGGAAGAAGAATGA

Protein sequence

MSTPAISGLHCEVWQPQDFSEPSCSSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRTIPMVVELILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCEIDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE*

Homology

[Close]

BLAST of CSPI01G07880 vs. ExPASy Swiss-Prot
Match: Q9LQX2 (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-12
Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 147 GSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCEIDVVQMPCLHVYHLNCIHKWLE 206
           G   AS+ASI  M  +EIDG   +CVICL+E  S   E  V +MPC H +H  CI KWL 
Sbjct: 89  GRPPASKASIDAMPIVEIDGCEGECVICLEEWKS---EETVKEMPCKHRFHGGCIEKWLG 148

Query: 207 LSNRCPLCRFQMPLE 222
               CP+CR++MP++
Sbjct: 149 FHGSCPVCRYEMPVD 160

[Close]

BLAST of CSPI01G07880 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.8e-10
Identity = 31/83 (37.35%), Postives = 51/83 (61.45%), Query Frame = 0


Query: 147 GSGRASRASIQEMERIEI-----DGVLSDCVICLDEI--GSIGCEIDVVQMPCLHVYHLN 206
           G+  AS+++I  +  +++        ++ C +C+DE   GS     DV QMPC HV+H +
Sbjct: 187 GTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGS-----DVKQMPCKHVFHQD 246

Query: 207 CIHKWLELSNRCPLCRFQMPLEE 223
           C+  WLEL N CP+CRF++P ++
Sbjct: 247 CLLPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of CSPI01G07880 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.0e-10
Identity = 32/78 (41.03%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 147 GSGRASRASIQEMERIEIDGVLSDCVICLD--EIGSIGCEIDVVQMPCLHVYHLNCIHKW 206
           G+  A + +++ +  ++I+ V+S C +CLD  E+GS        QMPC H +H +CI  W
Sbjct: 176 GTPPAKKEAVEALPTVKIEEVVS-CSVCLDDLEVGS-----QAKQMPCEHKFHSSCILPW 235

Query: 207 LELSNRCPLCRFQMPLEE 223
           LEL + CP+CRF++P EE
Sbjct: 236 LELHSSCPVCRFELPSEE 247

[Close]

BLAST of CSPI01G07880 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.4e-09
Identity = 28/79 (35.44%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 147 GSGRASRASIQEMERIEID----GVLSDCVICLDEIGSIGCEIDVVQMPCLHVYHLNCIH 206
           G+  AS+++I+ + R+EI     G  ++C +C +   +   E +  +MPC H++H +CI 
Sbjct: 171 GNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFET---ETEAREMPCKHLFHDDCIV 230

Query: 207 KWLELSNRCPLCRFQMPLE 222
            WL + N CP+CRF++P E
Sbjct: 231 PWLSIRNSCPVCRFELPSE 246

[Close]

BLAST of CSPI01G07880 vs. ExPASy Swiss-Prot
Match: Q9CY62 (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus OX=10090 GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.4e-09
Identity = 28/75 (37.33%), Postives = 46/75 (61.33%), Query Frame = 0


Query: 151 ASRASIQEMERIEIDGVLSD--CVICLDEIGSIGCEIDVVQMPCLHVYHLNCIHKWLELS 210
           A++A ++ + R  I    +D  C +CL E  +   E  V++MPC H++H NCI  WL  +
Sbjct: 66  AAKAVVESLPRTVISSAKADLKCPVCLLEFEA---EETVIEMPCHHLFHSNCILPWLSKT 125

Query: 211 NRCPLCRFQMPLEEE 224
           N CPLCR ++P +++
Sbjct: 126 NSCPLCRHELPTDDD 137

[Close]

BLAST of CSPI01G07880 vs. ExPASy TrEMBL
Match: A0A0A0LR28 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045460 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 4.6e-126
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MSTPAISGLHCEVWQPQDFSEPSCSSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRY 60
           MSTPAISGLHCEVWQPQDFSEPSCSSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRY
Sbjct: 1   MSTPAISGLHCEVWQPQDFSEPSCSSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRY 60

Query: 61  KNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRTI 120
           KNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRTI
Sbjct: 61  KNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRTI 120

Query: 121 PMVVELILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGS 180
           PMVVELILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGS
Sbjct: 121 PMVVELILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGS 180

Query: 181 IGCEIDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 224
           IGCEIDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE
Sbjct: 181 IGCEIDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223

[Close]

BLAST of CSPI01G07880 vs. ExPASy TrEMBL
Match: A0A5D3BJ05 (E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003020 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 5.4e-119
Identity = 213/219 (97.26%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 5   AISGLHCEVWQPQDFSEPSCSSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFR 64
           AISGLHCEVWQPQDFSEPSC SSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFR
Sbjct: 6   AISGLHCEVWQPQDFSEPSC-SSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFR 65

Query: 65  QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRTIPMVV 124
           QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQIS RARGIATEPINALSRTIPMVV
Sbjct: 66  QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTIPMVV 125

Query: 125 ELILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCE 184
           EL+LPEDAME SGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCE
Sbjct: 126 ELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCE 185

Query: 185 IDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 224
           ID V+MPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE
Sbjct: 186 IDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223

[Close]

BLAST of CSPI01G07880 vs. ExPASy TrEMBL
Match: A0A1S3AU71 (uncharacterized protein LOC103482872 OS=Cucumis melo OX=3656 GN=LOC103482872 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 5.4e-119
Identity = 213/219 (97.26%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 5   AISGLHCEVWQPQDFSEPSCSSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFR 64
           AISGLHCEVWQPQDFSEPSC SSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFR
Sbjct: 6   AISGLHCEVWQPQDFSEPSC-SSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFR 65

Query: 65  QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRTIPMVV 124
           QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQIS RARGIATEPINALSRTIPMVV
Sbjct: 66  QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTIPMVV 125

Query: 125 ELILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCE 184
           EL+LPEDAME SGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCE
Sbjct: 126 ELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCE 185

Query: 185 IDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 224
           ID V+MPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE
Sbjct: 186 IDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223

[Close]

BLAST of CSPI01G07880 vs. ExPASy TrEMBL
Match: A0A6J1KQS3 (uncharacterized protein LOC111495638 OS=Cucurbita maxima OX=3661 GN=LOC111495638 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.1e-100
Identity = 181/219 (82.65%), Postives = 198/219 (90.41%), Query Frame = 0


Query: 5   AISGLHCEVWQPQDFSEPSCSSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFR 64
           A+SGLHCEVWQPQDFSE  CS SSSSS  + PEFFIDFYVSSYAT GD++ISTLRYKNFR
Sbjct: 9   AVSGLHCEVWQPQDFSETHCSFSSSSS--ESPEFFIDFYVSSYATQGDQIISTLRYKNFR 68

Query: 65  QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRTIPMVV 124
           QRCDVLTQDSFSWSAIS+MLSETNVPYHLQPFFI QIS  ARGIATEP NALSRTIPMVV
Sbjct: 69  QRCDVLTQDSFSWSAISTMLSETNVPYHLQPFFIQQISISARGIATEPTNALSRTIPMVV 128

Query: 125 ELILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCE 184
           EL+LPE+AMEDS YGS+  MG GS RASRASIQEMER+E++G LSDCVICLD+I S+G E
Sbjct: 129 ELVLPEEAMEDSSYGSDTIMGTGSRRASRASIQEMERVEMNGALSDCVICLDDIVSVGSE 188

Query: 185 IDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 224
           ID ++MPCLH+YH NCIHKWL+LSNRCPLCRFQMPLEEE
Sbjct: 189 IDALRMPCLHIYHRNCIHKWLQLSNRCPLCRFQMPLEEE 225

[Close]

BLAST of CSPI01G07880 vs. ExPASy TrEMBL
Match: A0A6J1CAF5 (E3 ubiquitin-protein ligase CIP8-like OS=Momordica charantia OX=3673 GN=LOC111008905 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 5.3e-74
Identity = 148/219 (67.58%), Postives = 169/219 (77.17%), Query Frame = 0


Query: 7   SGLHCEVWQPQDFSEPSCSSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFRQR 66
           +GLHCEVWQPQ+++E  CSSSSS    +PPEFFID YVSSYA  G E IS+LRYKNFR+R
Sbjct: 4   AGLHCEVWQPQEWAESDCSSSSS----EPPEFFIDLYVSSYANQGGETISSLRYKNFRRR 63

Query: 67  CDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRTIPMVVEL 126
            DV TQDS SWSAIS+MLSET+VPYHLQPFFI  IS RAR IA +P NALSRTIP+VVEL
Sbjct: 64  RDVFTQDSLSWSAISTMLSETSVPYHLQPFFIQHISLRARRIAAQPTNALSRTIPIVVEL 123

Query: 127 ILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEID-GVL-SDCVICLDEIGSIGCE 186
           +LP    E+SG GS+P +  G GRASRASI+EMER EI+ G+   DC ICLDEI     E
Sbjct: 124 VLPLPEEEESGSGSDPRVPNGPGRASRASIEEMERAEIELGICGGDCAICLDEI-----E 183

Query: 187 IDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 224
              V MPC H+YH NCI KWL+ +N CPLCRFQMPLE E
Sbjct: 184 CGAVGMPCSHIYHRNCIVKWLQQNNLCPLCRFQMPLEME 213

[Close]

BLAST of CSPI01G07880 vs. NCBI nr
Match: XP_004152533.1 (uncharacterized protein LOC101217869 [Cucumis sativus] >KGN64248.1 hypothetical protein Csa_014260 [Cucumis sativus])

HSP 1 Score: 460.3 bits (1183), Expect = 9.5e-126
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MSTPAISGLHCEVWQPQDFSEPSCSSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRY 60
           MSTPAISGLHCEVWQPQDFSEPSCSSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRY
Sbjct: 1   MSTPAISGLHCEVWQPQDFSEPSCSSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRY 60

Query: 61  KNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRTI 120
           KNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRTI
Sbjct: 61  KNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRTI 120

Query: 121 PMVVELILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGS 180
           PMVVELILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGS
Sbjct: 121 PMVVELILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGS 180

Query: 181 IGCEIDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 224
           IGCEIDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE
Sbjct: 181 IGCEIDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223

[Close]

BLAST of CSPI01G07880 vs. NCBI nr
Match: XP_008437461.1 (PREDICTED: uncharacterized protein LOC103482872 [Cucumis melo] >TYJ99097.1 E3 ubiquitin-protein ligase [Cucumis melo var. makuwa])

HSP 1 Score: 436.8 bits (1122), Expect = 1.1e-118
Identity = 213/219 (97.26%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 5   AISGLHCEVWQPQDFSEPSCSSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFR 64
           AISGLHCEVWQPQDFSEPSC SSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFR
Sbjct: 6   AISGLHCEVWQPQDFSEPSC-SSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFR 65

Query: 65  QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRTIPMVV 124
           QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQIS RARGIATEPINALSRTIPMVV
Sbjct: 66  QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTIPMVV 125

Query: 125 ELILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCE 184
           EL+LPEDAME SGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCE
Sbjct: 126 ELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCE 185

Query: 185 IDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 224
           ID V+MPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE
Sbjct: 186 IDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223

[Close]

BLAST of CSPI01G07880 vs. NCBI nr
Match: XP_038895883.1 (E3 ubiquitin-protein ligase synoviolin A-like [Benincasa hispida])

HSP 1 Score: 398.3 bits (1022), Expect = 4.4e-107
Identity = 196/217 (90.32%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 7   SGLHCEVWQPQDFSEPSCSSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFRQR 66
           SGLHCEVWQPQDFSE + SSSSSSSQ QPPEFFIDFYVSSYAT GDE+ISTLRYKNFRQR
Sbjct: 10  SGLHCEVWQPQDFSE-TPSSSSSSSQSQPPEFFIDFYVSSYATQGDEIISTLRYKNFRQR 69

Query: 67  CDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRTIPMVVEL 126
           CDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQIS RARGIATEPINALSRTIPMVVEL
Sbjct: 70  CDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTIPMVVEL 129

Query: 127 ILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCEID 186
           +LPE+AMEDS YGS+ HMGI SGRASRASIQ+MER+EIDGVLSDCVICLDEI SIG EID
Sbjct: 130 MLPEEAMEDSSYGSDTHMGIVSGRASRASIQDMERVEIDGVLSDCVICLDEIVSIGYEID 189

Query: 187 VVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 224
            V+MPCLHVYH NCIHKWLE SNRCPLCRFQMPLEEE
Sbjct: 190 AVRMPCLHVYHRNCIHKWLEFSNRCPLCRFQMPLEEE 225

[Close]

BLAST of CSPI01G07880 vs. NCBI nr
Match: XP_023519803.1 (RING-H2 finger protein ATL77-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380.2 bits (975), Expect = 1.3e-101
Identity = 183/219 (83.56%), Postives = 200/219 (91.32%), Query Frame = 0


Query: 5   AISGLHCEVWQPQDFSEPSCSSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFR 64
           A+SGLHCEVWQPQD SE  CS SSSSS+F  PEFFIDFYVSSYAT GD++ISTLRYKNFR
Sbjct: 9   AVSGLHCEVWQPQDLSETHCSFSSSSSEF--PEFFIDFYVSSYATQGDQIISTLRYKNFR 68

Query: 65  QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRTIPMVV 124
           QRCDVLTQDSFSWSAIS+MLSETNVPYHLQPFFI QIS  ARGIATEP NALSRTIPMVV
Sbjct: 69  QRCDVLTQDSFSWSAISTMLSETNVPYHLQPFFIQQISISARGIATEPTNALSRTIPMVV 128

Query: 125 ELILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCE 184
           EL+LPE+AMEDSGYGS+  MG GS RASRASIQEMER+E++GVLSDCVICLD+I S+G E
Sbjct: 129 ELVLPEEAMEDSGYGSDTIMGTGSRRASRASIQEMERVEMNGVLSDCVICLDDIVSVGSE 188

Query: 185 IDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 224
           ID ++MPCLH+YH NCIHKWL+LSNRCPLCRFQMPLEEE
Sbjct: 189 IDALRMPCLHIYHRNCIHKWLQLSNRCPLCRFQMPLEEE 225

[Close]

BLAST of CSPI01G07880 vs. NCBI nr
Match: KAG6584266.1 (E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 379.8 bits (974), Expect = 1.6e-101
Identity = 183/219 (83.56%), Postives = 200/219 (91.32%), Query Frame = 0


Query: 5   AISGLHCEVWQPQDFSEPSCSSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFR 64
           A+SGLHCEVWQPQDFSE  CS SSSSS  + PEFFIDFYVSSYAT GD++ISTLRYKNFR
Sbjct: 9   AVSGLHCEVWQPQDFSETHCSFSSSSS--ESPEFFIDFYVSSYATQGDQIISTLRYKNFR 68

Query: 65  QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRTIPMVV 124
           QRCDVLTQDSFSWSAIS+MLSETNVPYHLQPFFI QIS  ARGIATEP NALSRTIPMVV
Sbjct: 69  QRCDVLTQDSFSWSAISTMLSETNVPYHLQPFFIQQISISARGIATEPTNALSRTIPMVV 128

Query: 125 ELILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCE 184
           EL+LPE+AMEDSGYGS+  MG GS RASRASIQEMER+E++GVLSDCVICLD+I S+G E
Sbjct: 129 ELVLPEEAMEDSGYGSDTIMGTGSRRASRASIQEMERVEMNGVLSDCVICLDDIVSVGSE 188

Query: 185 IDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 224
           ID ++MPCLH+YH NCIHKWL+LSNRCPLCRFQMPLEEE
Sbjct: 189 IDALRMPCLHIYHRNCIHKWLQLSNRCPLCRFQMPLEEE 225

[Close]

BLAST of CSPI01G07880 vs. TAIR 10
Match: AT1G26800.1 (RING/U-box superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 8.0e-14
Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 147 GSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCEIDVVQMPCLHVYHLNCIHKWLE 206
           G   AS+ASI  M  +EIDG   +CVICL+E  S   E  V +MPC H +H  CI KWL 
Sbjct: 89  GRPPASKASIDAMPIVEIDGCEGECVICLEEWKS---EETVKEMPCKHRFHGGCIEKWLG 148

Query: 207 LSNRCPLCRFQMPLE 222
               CP+CR++MP++
Sbjct: 149 FHGSCPVCRYEMPVD 160

[Close]

BLAST of CSPI01G07880 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-11
Identity = 31/83 (37.35%), Postives = 51/83 (61.45%), Query Frame = 0


Query: 147 GSGRASRASIQEMERIEI-----DGVLSDCVICLDEI--GSIGCEIDVVQMPCLHVYHLN 206
           G+  AS+++I  +  +++        ++ C +C+DE   GS     DV QMPC HV+H +
Sbjct: 187 GTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGS-----DVKQMPCKHVFHQD 246

Query: 207 CIHKWLELSNRCPLCRFQMPLEE 223
           C+  WLEL N CP+CRF++P ++
Sbjct: 247 CLLPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of CSPI01G07880 vs. TAIR 10
Match: AT1G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.5 bits (153), Expect = 2.4e-10
Identity = 34/99 (34.34%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 125 ELILPEDAMED-SGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGC 184
           E++L   A  D + YG+ P        A + +++ +  ++I+  L  C +CLD+   IG 
Sbjct: 185 EMLLQRLAENDPNRYGTPP--------AKKEAVEALATVKIEETL-QCSVCLDDF-EIGT 244

Query: 185 EIDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEE 223
           E  +  MPC H +H +C+  WLEL + CP+CR+Q+P +E
Sbjct: 245 EAKL--MPCTHKFHSDCLLPWLELHSSCPVCRYQLPADE 271

[Close]

BLAST of CSPI01G07880 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 63.5 bits (153), Expect = 2.4e-10
Identity = 28/79 (35.44%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 147 GSGRASRASIQEMERIEID----GVLSDCVICLDEIGSIGCEIDVVQMPCLHVYHLNCIH 206
           G+  AS+++I+ + R+EI     G  ++C +C +   +   E +  +MPC H++H +CI 
Sbjct: 171 GNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFET---ETEAREMPCKHLFHDDCIV 230

Query: 207 KWLELSNRCPLCRFQMPLE 222
            WL + N CP+CRF++P E
Sbjct: 231 PWLSIRNSCPVCRFELPSE 246

[Close]

BLAST of CSPI01G07880 vs. TAIR 10
Match: AT3G13430.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 5.4e-10
Identity = 26/77 (33.77%), Postives = 48/77 (62.34%), Query Frame = 0


Query: 147 GSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCEIDVVQMPCLHVYHLNCIHKWLE 206
           G+  A++ +++ +  ++I+  L  C +CLD+   IG E    +MPC H +H +C+  WLE
Sbjct: 201 GTPPATKEAVEALAMVKIEDSLLQCSVCLDDF-EIGME--AKEMPCKHKFHSDCLLPWLE 260

Query: 207 LSNRCPLCRFQMPLEEE 224
           L + CP+CR+ +P  ++
Sbjct: 261 LHSSCPVCRYLLPTGDD 274

The following BLAST results are available for this feature:

BLAST of CSPI01G07880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQX2	1.1e-12	48.00	E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 ...	[more]
Q8LPN7	1.8e-10	37.35	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q6AVN2	4.0e-10	41.03	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]
Q940T5	3.4e-09	35.44	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
Q9CY62	4.4e-09	37.33	E3 ubiquitin-protein ligase RNF181 OS=Mus musculus OX=10090 GN=Rnf181 PE=1 SV=1	[more]

BLAST of CSPI01G07880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR28	4.6e-126	100.00	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045460 P...	[more]
A0A5D3BJ05	5.4e-119	97.26	E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3AU71	5.4e-119	97.26	uncharacterized protein LOC103482872 OS=Cucumis melo OX=3656 GN=LOC103482872 PE=...	[more]
A0A6J1KQS3	1.1e-100	82.65	uncharacterized protein LOC111495638 OS=Cucurbita maxima OX=3661 GN=LOC111495638...	[more]
A0A6J1CAF5	5.3e-74	67.58	E3 ubiquitin-protein ligase CIP8-like OS=Momordica charantia OX=3673 GN=LOC11100...	[more]

BLAST of CSPI01G07880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152533.1	9.5e-126	100.00	uncharacterized protein LOC101217869 [Cucumis sativus] >KGN64248.1 hypothetical ...	[more]
XP_008437461.1	1.1e-118	97.26	PREDICTED: uncharacterized protein LOC103482872 [Cucumis melo] >TYJ99097.1 E3 ub...	[more]
XP_038895883.1	4.4e-107	90.32	E3 ubiquitin-protein ligase synoviolin A-like [Benincasa hispida]	[more]
XP_023519803.1	1.3e-101	83.56	RING-H2 finger protein ATL77-like [Cucurbita pepo subsp. pepo]	[more]
KAG6584266.1	1.6e-101	83.56	E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CSPI01G07880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26800.1	8.0e-14	48.00	RING/U-box superfamily protein	[more]
AT3G19950.1	1.3e-11	37.35	RING/U-box superfamily protein	[more]
AT1G55530.1	2.4e-10	34.34	RING/U-box superfamily protein	[more]
AT5G59550.1	2.4e-10	35.44	zinc finger (C3HC4-type RING finger) family protein	[more]
AT3G13430.1	5.4e-10	33.77	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 171..214 e-value: 2.1E-6 score: 37.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 170..215 e-value: 1.2E-10 score: 41.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 171..215 score: 12.267982
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 144..220 e-value: 3.0E-16 score: 60.9
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 38..219
None	No IPR available	PANTHER	PTHR15710:SF138	FINGER PROTEIN, PUTATIVE-RELATED	coord: 38..219
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 170..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G07880.1	CSPI01G07880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding