CSPI01G00010 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G00010
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	60S acidic ribosomal protein P1-like
Location	Chr1: 3006 .. 4307 (-)
RNA-Seq Expression	CSPI01G00010
Synteny	CSPI01G00010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTTGGTAGTGGCATGAAAAACCCTAAATCCTAATCCCTCTTCTCTCAGTATATAATCAGATAGAGTAGTGGCGATCGACGGACGCGAATTTTGCCTCCCAATTGTCTCCTTTCAGCTCTGAGATCATTATTGATTGGTTAATTCGCATTTAGCCATGTCTACCAGTGAACTCGCGTGCGCGTACGCCGCCCTGGCTCTTCACGATGATGGAATCGCAATCACTGTACGAACCATTATCTTTCTTTGTTTTTATCTTTTTTTTTTTCATTCTTTGGATTATTTGATGCCTGATTAATTTGCATATTGTGTATAGGCGGAAAAGATTGCAGCCGTTGTAGCAGCTGCGGGGCTCTGTGTGGAATCTTACTGGCCTAGCTTGTTTGCTAAATTGGCCGAGAAGAGGAACATTGGGGACCTTCTTCTTAATGTTGGCTGTGGAGGTGGCGCTGCGGCTTCTGTGGCTGTAGCTGCTCCTACCGCCAGTGCTGCTGCCGCTCCTGCCATCGAGGAAAAGAGGGTATGCGGATGAATCTTTAACCGTTCTTCATTTTGAAAGTCTCCTTTACTTCTCTGTCTGCTAGCTCTAACTTTCCATTTACGCATGATTTTGAACAAGGGTCTTTTTCGTATATATATACTCACATAACACACATCCTAATACTAGCTAGTTACTGCCAAATTAGTTGACTACGAAAAATTGAACTGTTTAACTGTTGCCAATATAGGTTTTTTTTTTTCTTGCAACCAACCGTTAGGTAGTTCATAATATTCCTTTGAACTTTGGAAGTTAAGGATTTCATGTATCCAAGAGATTCAATAAAAAACTGAAAATTGATGAGGGTAATTTGTACTTTTGGAAATTTTAAGTTATTTTCGTTGATTGAGATATTAGTGACTTAGATCTTTATCGTTGCTTTAGTTTCATTCGCCTCGTTGTTCCTTTTTTGTCATTTGTTCATTTAAGCCAATTGTGCAGGAGGAGCCAAAGGAGGAGAGCGATGATGATATGGGATTCAGCTTATTCGATTAAGAGGCTTTCTTTATTTTGTAGGATTTTAACAGGAAACTATTTGGGTGGCTAGCTTAATTTTGATTTTTCGCTACTAATTTATCTCAAGATTTGTCTCTTTAATTGGGAGTTTTGAGTTTTGATTTGCCTTCAATGTACCGGTAACTGCATATTTTCATTCTTTTTTCTTAATTACTCCACATTGCAATGAGATCAAAATTTATGAGAGGAGTTATTTGGTTAAACCCGGGAACCACGTTTCTCGGTTGCAATGAGATCAAAATTTATGA

mRNA sequence

GTTTTTGGTAGTGGCATGAAAAACCCTAAATCCTAATCCCTCTTCTCTCAGTATATAATCAGATAGAGTAGTGGCGATCGACGGACGCGAATTTTGCCTCCCAATTGTCTCCTTTCAGCTCTGAGATCATTATTGATTGGTTAATTCGCATTTAGCCATGTCTACCAGTGAACTCGCGTGCGCGTACGCCGCCCTGGCTCTTCACGATGATGGAATCGCAATCACTGCGGAAAAGATTGCAGCCGTTGTAGCAGCTGCGGGGCTCTGTGTGGAATCTTACTGGCCTAGCTTGTTTGCTAAATTGGCCGAGAAGAGGAACATTGGGGACCTTCTTCTTAATGTTGGCTGTGGAGGTGGCGCTGCGGCTTCTGTGGCTGTAGCTGCTCCTACCGCCAGTGCTGCTGCCGCTCCTGCCATCGAGGAAAAGAGGGAGGAGCCAAAGGAGGAGAGCGATGATGATATGGGATTCAGCTTATTCGATTAAGAGGCTTTCTTTATTTTGTAGGATTTTAACAGGAAACTATTTGGGTGGCTAGCTTAATTTTGATTTTTCGCTACTAATTTATCTCAAGATTTGTCTCTTTAATTGGGAGTTTTGAGTTTTGATTTGCCTTCAATGTACCGGTAACTGCATATTTTCATTCTTTTTTCTTAATTACTCCACATTGCAATGAGATCAAAATTTATGAGAGGAGTTATTTGGTTAAACCCGGGAACCACGTTTCTCGGTTGCAATGAGATCAAAATTTATGA

Coding sequence (CDS)

ATGTCTACCAGTGAACTCGCGTGCGCGTACGCCGCCCTGGCTCTTCACGATGATGGAATCGCAATCACTGCGGAAAAGATTGCAGCCGTTGTAGCAGCTGCGGGGCTCTGTGTGGAATCTTACTGGCCTAGCTTGTTTGCTAAATTGGCCGAGAAGAGGAACATTGGGGACCTTCTTCTTAATGTTGGCTGTGGAGGTGGCGCTGCGGCTTCTGTGGCTGTAGCTGCTCCTACCGCCAGTGCTGCTGCCGCTCCTGCCATCGAGGAAAAGAGGGAGGAGCCAAAGGAGGAGAGCGATGATGATATGGGATTCAGCTTATTCGATTAA

Protein sequence

MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDDDMGFSLFD*

Homology

[Close]

BLAST of CSPI01G00010 vs. ExPASy Swiss-Prot
Match: P52855 (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.1e-33
Identity = 81/110 (73.64%), Postives = 92/110 (83.64%), Query Frame = 0


Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           M++ ELAC YAAL L DDGIAITAEKIA +V AA + VESYWP+LFAKL EKRN+ DL+L
Sbjct: 1   MASGELACRYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60

Query: 61  NVGCGGGAAASVAVAAPT--ASAAAAPAIEEKREEPKEESDDDMGFSLFD 109
           +VG GGG AA VA AAP   A+AAAAPA+EEK+EE KEESDDDMGFSLFD
Sbjct: 61  SVGSGGG-AAPVAAAAPAGGAAAAAAPAVEEKKEEAKEESDDDMGFSLFD 109

[Close]

BLAST of CSPI01G00010 vs. ExPASy Swiss-Prot
Match: Q8LCW9 (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 SV=2)

HSP 1 Score: 130.6 bits (327), Expect = 1.1e-29
Identity = 74/112 (66.07%), Postives = 88/112 (78.57%), Query Frame = 0


Query: 1   MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLL 60
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGCGGGAAASVAVAAPTA--SAAAAPAIEE-KREEPKEESDDDMGFSLFD 109
           +NVG GGG  A VA AAP A   AAAAPA EE K++EP EESD D+GF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]

BLAST of CSPI01G00010 vs. ExPASy Swiss-Prot
Match: Q8LEQ0 (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 SV=2)

HSP 1 Score: 130.6 bits (327), Expect = 1.1e-29
Identity = 74/113 (65.49%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 1   MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLL 60
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGCGGGAAASVAVAAPTA---SAAAAPAIEE-KREEPKEESDDDMGFSLFD 109
           +NVG GGG  A VA AAP A   +AAAAPA EE K++EP EESD D+GF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of CSPI01G00010 vs. ExPASy Swiss-Prot
Match: O23095 (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 2.1e-28
Identity = 72/113 (63.72%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 1   MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLL 60
           MST  ELAC+YA + L D+GIAIT++KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGC-GGGAAASVAVAAPTA---SAAAAPAIEEKREEPKEESDDDMGFSLFD 109
           +NVG  GGG  A V+ AAP A   +AAAAPA EEK++EP EESD D+GF LFD
Sbjct: 61  MNVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of CSPI01G00010 vs. ExPASy Swiss-Prot
Match: P29763 (60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.8e-24
Identity = 66/109 (60.55%), Postives = 78/109 (71.56%), Query Frame = 0


Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELAC YAAL LHDDG+ ITA+ I  +  AAG+ VE YWP+LFAKL  K+++ DL+ 
Sbjct: 1   MSTSELACTYAALILHDDGLEITADNINTICKAAGVEVEGYWPALFAKLFAKKSMDDLIT 60

Query: 61  NVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEES-DDDMGFSLFD 109
           NVG GGGAA   A AAP A  A A     K+EE KE S ++DMGFSLFD
Sbjct: 61  NVGAGGGAAP--AAAAPAAGGAPAAGAAPKKEEKKEPSEEEDMGFSLFD 107

[Close]

BLAST of CSPI01G00010 vs. ExPASy TrEMBL
Match: A0A0A0LTV1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000010 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.2e-48
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 61  NVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDDDMGFSLFD 109
           NVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDDDMGFSLFD 108

[Close]

BLAST of CSPI01G00010 vs. ExPASy TrEMBL
Match: A0A1S3C0X1 (60S acidic ribosomal protein P1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495745 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.3e-46
Identity = 105/108 (97.22%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 61  NVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDDDMGFSLFD 109
           NVGCGGGAAA VAVAAPTASAAAA AIEEK+EEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDDDMGFSLFD 108

[Close]

BLAST of CSPI01G00010 vs. ExPASy TrEMBL
Match: A0A5A7TTB2 (60S acidic ribosomal protein P1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001460 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 6.7e-46
Identity = 104/108 (96.30%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 61  NVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDDDMGFSLFD 109
           NVGCGGGAAA VAVAAPTASAA A AIEEK+EEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVAVAAPTASAAVASAIEEKKEEPKEESDDDMGFSLFD 108

[Close]

BLAST of CSPI01G00010 vs. ExPASy TrEMBL
Match: A0A6J1G2H4 (60S acidic ribosomal protein P1-like OS=Cucurbita moschata OX=3662 GN=LOC111450051 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.4e-43
Identity = 99/110 (90.00%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELACAYAALALHDDGIAITA+KIAAVVAAAGLCVESYWPSLFAKLAEKR+IGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLL 60

Query: 61  NVGCGGGAAASVAVAAPT--ASAAAAPAIEEKREEPKEESDDDMGFSLFD 109
           NVGCGGGAAA+V+VAAP   A++AAAPA+EEK+EEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAAVSVAAPAGGAASAAAPAVEEKKEEPKEESDDDMGFSLFD 110

[Close]

BLAST of CSPI01G00010 vs. ExPASy TrEMBL
Match: A0A6J1CGB2 (60S acidic ribosomal protein P1-like OS=Momordica charantia OX=3673 GN=LOC111011416 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.3e-43
Identity = 99/111 (89.19%), Postives = 106/111 (95.50%), Query Frame = 0


Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELACAYAA+AL+DDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 61  NVGCGGGAAASVAVAAP---TASAAAAPAIEEKREEPKEESDDDMGFSLFD 109
           NVGCGGGAAA V+VAAP    A++AAAPA+EEK+EEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEESDDDMGFSLFD 111

[Close]

BLAST of CSPI01G00010 vs. NCBI nr
Match: XP_004138012.2 (60S acidic ribosomal protein P1 [Cucumis sativus] >KGN63426.1 hypothetical protein Csa_013711 [Cucumis sativus])

HSP 1 Score: 200.7 bits (509), Expect = 6.6e-48
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 61  NVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDDDMGFSLFD 109
           NVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDDDMGFSLFD 108

[Close]

BLAST of CSPI01G00010 vs. NCBI nr
Match: XP_008455614.1 (PREDICTED: 60S acidic ribosomal protein P1-like isoform X1 [Cucumis melo])

HSP 1 Score: 194.5 bits (493), Expect = 4.7e-46
Identity = 105/108 (97.22%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 61  NVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDDDMGFSLFD 109
           NVGCGGGAAA VAVAAPTASAAAA AIEEK+EEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDDDMGFSLFD 108

[Close]

BLAST of CSPI01G00010 vs. NCBI nr
Match: XP_038905168.1 (60S acidic ribosomal protein P1-like [Benincasa hispida])

HSP 1 Score: 193.7 bits (491), Expect = 8.1e-46
Identity = 103/108 (95.37%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 61  NVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDDDMGFSLFD 109
           NVGCGGGAAA VAVAAP  SAAAAPA+EEK+EEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVAVAAPAVSAAAAPAVEEKKEEPKEESDDDMGFSLFD 108

[Close]

BLAST of CSPI01G00010 vs. NCBI nr
Match: KAA0045366.1 (60S acidic ribosomal protein P1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 193.0 bits (489), Expect = 1.4e-45
Identity = 104/108 (96.30%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 61  NVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDDDMGFSLFD 109
           NVGCGGGAAA VAVAAPTASAA A AIEEK+EEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVAVAAPTASAAVASAIEEKKEEPKEESDDDMGFSLFD 108

[Close]

BLAST of CSPI01G00010 vs. NCBI nr
Match: XP_038905286.1 (60S acidic ribosomal protein P1-like [Benincasa hispida])

HSP 1 Score: 189.5 bits (480), Expect = 1.5e-44
Identity = 101/108 (93.52%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELACAYAALALHDDGIAITAEKIAAV+AAAGL VESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVIAAAGLSVESYWPSLFAKLAEKRNIGDLLL 60

Query: 61  NVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDDDMGFSLFD 109
           NVGCGGGAAA VAVAAP  SAAAAPA+EEK+EEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVAVAAPAVSAAAAPAVEEKKEEPKEESDDDMGFSLFD 108

[Close]

BLAST of CSPI01G00010 vs. TAIR 10
Match: AT1G01100.1 (60S acidic ribosomal protein family )

HSP 1 Score: 130.6 bits (327), Expect = 7.8e-31
Identity = 74/112 (66.07%), Postives = 88/112 (78.57%), Query Frame = 0


Query: 1   MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLL 60
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGCGGGAAASVAVAAPTA--SAAAAPAIEE-KREEPKEESDDDMGFSLFD 109
           +NVG GGG  A VA AAP A   AAAAPA EE K++EP EESD D+GF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]

BLAST of CSPI01G00010 vs. TAIR 10
Match: AT1G01100.2 (60S acidic ribosomal protein family )

HSP 1 Score: 130.6 bits (327), Expect = 7.8e-31
Identity = 74/112 (66.07%), Postives = 88/112 (78.57%), Query Frame = 0


Query: 1   MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLL 60
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGCGGGAAASVAVAAPTA--SAAAAPAIEE-KREEPKEESDDDMGFSLFD 109
           +NVG GGG  A VA AAP A   AAAAPA EE K++EP EESD D+GF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]

BLAST of CSPI01G00010 vs. TAIR 10
Match: AT1G01100.4 (60S acidic ribosomal protein family )

HSP 1 Score: 130.6 bits (327), Expect = 7.8e-31
Identity = 74/112 (66.07%), Postives = 88/112 (78.57%), Query Frame = 0


Query: 1   MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLL 60
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGCGGGAAASVAVAAPTA--SAAAAPAIEE-KREEPKEESDDDMGFSLFD 109
           +NVG GGG  A VA AAP A   AAAAPA EE K++EP EESD D+GF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]

BLAST of CSPI01G00010 vs. TAIR 10
Match: AT5G47700.1 (60S acidic ribosomal protein family )

HSP 1 Score: 130.6 bits (327), Expect = 7.8e-31
Identity = 74/113 (65.49%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 1   MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLL 60
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGCGGGAAASVAVAAPTA---SAAAAPAIEE-KREEPKEESDDDMGFSLFD 109
           +NVG GGG  A VA AAP A   +AAAAPA EE K++EP EESD D+GF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of CSPI01G00010 vs. TAIR 10
Match: AT5G47700.2 (60S acidic ribosomal protein family )

HSP 1 Score: 130.6 bits (327), Expect = 7.8e-31
Identity = 74/113 (65.49%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 1   MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLL 60
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGCGGGAAASVAVAAPTA---SAAAAPAIEE-KREEPKEESDDDMGFSLFD 109
           +NVG GGG  A VA AAP A   +AAAAPA EE K++EP EESD D+GF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

The following BLAST results are available for this feature:

BLAST of CSPI01G00010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P52855	2.1e-33	73.64	60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1	[more]
Q8LCW9	1.1e-29	66.07	60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 ...	[more]
Q8LEQ0	1.1e-29	65.49	60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 ...	[more]
O23095	2.1e-28	63.72	60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 ...	[more]
P29763	1.8e-24	60.55	60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1	[more]

BLAST of CSPI01G00010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTV1	3.2e-48	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000010 PE=3 SV=1	[more]
A0A1S3C0X1	2.3e-46	97.22	60S acidic ribosomal protein P1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7TTB2	6.7e-46	96.30	60S acidic ribosomal protein P1-like isoform X1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A6J1G2H4	2.4e-43	90.00	60S acidic ribosomal protein P1-like OS=Cucurbita moschata OX=3662 GN=LOC1114500...	[more]
A0A6J1CGB2	5.3e-43	89.19	60S acidic ribosomal protein P1-like OS=Momordica charantia OX=3673 GN=LOC111011...	[more]

BLAST of CSPI01G00010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138012.2	6.6e-48	100.00	60S acidic ribosomal protein P1 [Cucumis sativus] >KGN63426.1 hypothetical prote...	[more]
XP_008455614.1	4.7e-46	97.22	PREDICTED: 60S acidic ribosomal protein P1-like isoform X1 [Cucumis melo]	[more]
XP_038905168.1	8.1e-46	95.37	60S acidic ribosomal protein P1-like [Benincasa hispida]	[more]
KAA0045366.1	1.4e-45	96.30	60S acidic ribosomal protein P1-like isoform X1 [Cucumis melo var. makuwa]	[more]
XP_038905286.1	1.5e-44	93.52	60S acidic ribosomal protein P1-like [Benincasa hispida]	[more]

BLAST of CSPI01G00010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01100.1	7.8e-31	66.07	60S acidic ribosomal protein family	[more]
AT1G01100.2	7.8e-31	66.07	60S acidic ribosomal protein family	[more]
AT1G01100.4	7.8e-31	66.07	60S acidic ribosomal protein family	[more]
AT5G47700.1	7.8e-31	65.49	60S acidic ribosomal protein family	[more]
AT5G47700.2	7.8e-31	65.49	60S acidic ribosomal protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038716	Ribosomal protein P1/P2, N-terminal domain	GENE3D	1.10.10.1410		coord: 1..63 e-value: 4.7E-30 score: 105.2
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 22..90 e-value: 1.3E-12 score: 48.1
None	No IPR available	PANTHER	PTHR45696	60S ACIDIC RIBOSOMAL PROTEIN P1	coord: 1..90
None	No IPR available	CDD	cd05831	Ribosomal_P1	coord: 16..61 e-value: 2.69573E-16 score: 65.8059

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G00010.1	CSPI01G00010.1	mRNA
CSPI01G00010.2	CSPI01G00010.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032147	activation of protein kinase activity
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006414	translational elongation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0030295	protein kinase activator activity
molecular_function	GO:0043021	ribonucleoprotein complex binding
molecular_function	GO:0003735	structural constituent of ribosome